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Gene

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gene1	start1	end1	ident1	chro1	strand1	gene2	start2	end2	ident2	chro2	strand2	ass_rel	type_junction	HiC_points	libHiCs
A1BG	1	158	100	19	+	A1BG	159	530	100	19	-	hg38	exon-exon	58338634-58348634	HAP1
AASDH	1	106	100	4	-	CRACD	107	570	99.6	4	+	hg38	exon-exon	56323834-56383834;56313834-56383834	GM12878;GM12878
ABCC10	1	107	100	6	+	CUL9	102	473	100	6	+	hg38	exon-exon	43222262-43432262;43212262-43432262	GM12878;GM12878
ABCF1-DT	32	86	98.6	6	-	PRR3	87	434	98.6	6	-	hg38	exon-exon	30572223-30572223	NHEK
ABI1	4	191	100	10	-	BIN2	184	282	100	12	+	hg38	intron-exon	26751071-51276216	RPE1
ABI1	1	369	100	10	-	YME1L1	368	555	100	10	-	hg38	exon-exon	26861071-27121071;26861071-27111071;26851071-27121071;26851071-27111071	GM12878,IMR90,HMEC,HUVEC,HAP1,K562,KBM-7,NHEK,RPE1;GM12878,IMR90,HMEC,HUVEC,HAP1,K562,KBM-7,NHEK,RPE1;GM12878,IMR90,HMEC,HUVEC,HAP1,K562,KBM-7,NHEK,RPE1;GM12878,IMR90,HMEC,HUVEC,HAP1,K562,KBM-7,NHEK,RPE1
ABI1	1	408	99.8	10	-	CLMN	405	565	100	14	-	hg38	exon-exon	26861071-95213663	GM12878
ACAA1	30	254	100	3	-	ACAA1	249	334	100	3	+	hg38	exon-exon	38128509-38128509;38118509-38128509	GM12878;GM12878
ACACA	1	71	100	17	-	STAC2	70	150	100	17	-	hg38	exon-exon	37123078-39223747;37123078-39213747;37113065-39223747;37113065-39213747	GM12878;GM12878;GM12878;GM12878
ACER3	1	297	100	11	-	ACER3	293	414	100	11	+	hg38	exon-exon	77018956-77018956	GM12878
ACOXL	1	145	98.7	2	+	IGKC	142	214	100	2	-	hg38	intron-exon	88850487-110802423	RPE1
ACRBP	22	99	98.8	12	+	MLXIP	93	310	98.2	12	-	hg38	exon-exon	6640834-122135453	RPE1
ACTA2	1	191	99	10	+	ACTA2	177	521	99.8	10	-	hg38	intron-exon	88950243-88950243;88940243-88950243;88940243-88940243	HAP1;HAP1;HAP1
ACTA2-AS1	17	85	100	10	+	ACTA2	82	207	99.3	10	-	hg38	exon-exon	88940243-88940243	HAP1
ACTA2-AS1	10	197	99	10	+	ACTA2	196	489	99	10	-	hg38	exon-exon	88940243-88940243	HAP1
ACTC1	1	65	100	15	-	LOC101928174	58	223	98.8	15	+	hg38	exon-intron	34787799-34797799	RPE1
ACTN1	16	629	100	14	+	ACTN1	627	683	100	14	-	hg38	exon-exon	68883283-68883283	K562
ACTN1	18	112	99	14	+	ACTN1	110	190	100	14	-	hg38	exon-exon	68883283-68883283	K562
ACTN1	9	325	99.1	14	+	ACTN1	320	528	96.2	14	-	hg38	exon-exon	68883283-68883283	K562
ACTN2	1	58	96.6	1	+	ACTN2	53	322	98.2	1	-	hg38	exon-exon	236746700-236766700	IMR90-Dixon
ADAM9	19	495	99.6	8	-	ADAM9	492	592	99.1	8	+	hg38	exon-exon	39102481-39102481	K562
ADAMTS19	2	83	100	5	+	SLC27A6	83	597	100	5	+	hg38	exon-exon	129034307-129464307;129024307-129464307	GM12878;GM12878
ADO	18	80	100	10	-	ADO	73	419	99.5	10	+	hg38	exon-exon	62800240-62800240	GM12878
ADRA1D	6	187	100	20	+	ADRA1D	178	2002	99.9	20	-	hg38	exon-exon	4229353-4249353;4219353-4249353	HUVEC;HUVEC
AFF3	2	384	100	2	-	EIF5B	384	595	100	2	+	hg38	exon-exon	99363537-100133538;99353537-100133538	GM12878;GM12878
AGBL5	25	187	100	2	+	OST4	188	350	100	2	+	hg38	intron-exon	27077132-27077132	IMR90
AGBL5	345	485	97.9	2	-	OST4	486	776	97.9	2	-	hg38	intron-exon	27077132-27077132	IMR90
AGBL5	26	274	99.8	2	-	OST4	275	462	99.8	2	-	hg38	intron-exon	27077132-27077132	IMR90
AGO4	1	202	99.1	1	-	AGO4	201	391	100	1	+	hg38	exon-exon	35834399-35844399;35844399-35854399;35844399-35844399;35834399-35854399	GM12878,IMR90;GM12878,K562;GM12878,K562;GM12878,K562
AHNAK	1	267	99.3	11	+	FBXL17	262	505	100	5	+	hg38	exon-intron	62522528-108174299	GM12878
AIFM2	11	193	100	10	+	AIFM2	179	414	98.4	10	-	hg38	exon-exon	70120244-70130244	GM12878
AK2	1	357	98.9	1	+	AK2P1	162	476	96.2	1	+	hg38	exon-exon	33004399-58624328	IMR90
AKAP10	10	234	98.7	17	-	AKAP10	231	293	100	17	+	hg38	exon-exon	19906687-19926687;19906687-19916687	GM12878;GM12878
AKAP3	1	105	100	12	+	AKAP3	104	382	100	12	-	hg38	exon-exon	4620834-4620834;4610834-4620834;4610834-4610834	NHEK;NHEK;NHEK
AKAP9	1	281	99.7	7	+	CDK14	279	535	100	7	+	hg38	exon-exon	91120685-91940686	hESC
AKT3	7	194	100	1	-	PITRM1	189	244	100	10	+	hg38	exon-intron	243496698-3167808	HUVEC
AKT3	1	462	98.8	1	-	SDCCAG8	336	708	98.8	1	-	hg38	exon-exon	243426698-243506698;243426698-243496698;243416698-243506698;243416698-243496698	GM12878,IMR90,IMR90-Dixon,HMEC,HUVEC,hESC,HAP1,K562,KBM-7,NHEK,RPE1;GM12878,IMR90,IMR90-Dixon,HMEC,HUVEC,hESC,HAP1,K562,KBM-7,NHEK,RPE1;GM12878,IMR90,IMR90-Dixon,HMEC,HUVEC,hESC,HAP1,K562,KBM-7,NHEK,RPE1;GM12878,IMR90,IMR90-Dixon,HMEC,HUVEC,hESC,HAP1,K562,KBM-7,NHEK,RPE1
ALDH16A1	1	228	98.4	19	-	PIH1D1	229	881	98.4	19	-	hg38	intron-exon	49446743-49456743	GM12878
ALDOA	29	195	99.4	16	+	ALDOA	189	250	98.4	16	-	hg38	exon-exon	30078679-30078679	hESC
AMZ2	1	152	100	17	+	SCAP	146	414	100	3	-	hg38	exon-exon	68253859-47418510	GM12878
ANK2	1	88	100	4	+	ANK2	82	475	99.5	4	-	hg38	intron-exon	113358844-113358844;113348844-113358844	GM12878;GM12878
ANKHD1-EIF4EBP3	14	103	98.9	5	-	ANKHD1-EIF4EBP3	96	598	99.5	5	+	hg38	exon-exon	140500415-140510415	NHEK
ANKRD27	18	213	98.5	19	+	ANKRD27	208	272	98.5	19	-	hg38	exon-exon	32629094-32629094	IMR90-Dixon
ANKRD62P1	1	102	99.1	22	+	ANKRD62P1-PARP4P3	96	231	100	22	+	hg38	intron-exon	16669110-16679110	GM12878
ANPEP	1	252	100	15	+	ANPEP	248	622	99.8	15	-	hg38	exon-exon	89806769-89806769;89796769-89806769;89796769-89796769	GM12878,NHEK;GM12878,K562,NHEK;GM12878,K562,NHEK
ANXA5	6	70	100	4	+	ANXA5	69	199	97.7	4	-	hg38	exon-exon	121668845-121668845	GM12878
ANXA5	1	246	98.4	4	+	ANXA5	244	355	99.2	4	-	hg38	exon-exon	121668845-121668845	GM12878
AP3D1	12	509	99.8	19	-	HSP90AA1	501	593	100	14	-	hg38	exon-exon	102093663-2110001	IMR90
APEH	8	70	100	3	+	APEH	63	342	100	3	-	hg38	exon-intron	49682567-49682567	GM12878,IMR90
APEH	5	2306	99.2	3	+	TRAK1	2306	3298	98.9	3	+	hg38	exon-exon	42188508-49682567	GM12878,IMR90
APLP2	1	189	100	11	+	EI24	188	600	99.8	11	+	hg38	exon-exon	125580104-130070105;125580104-130060105;125570104-130070105	K562;K562;K562
APLP2	1	189	100	11	+	SERPING1	186	592	100	11	+	hg38	exon-exon	57602527-130140105	GM12878
APLP2	1	307	98.7	11	-	APLP2	300	386	100	11	+	hg38	exon-exon	130120105-130130105;130120105-130120105	IMR90-Dixon;IMR90-Dixon
APMAP	19	200	100	20	+	APMAP	198	430	99.2	20	-	hg38	exon-exon	24969364-24969364	K562
APP	41	370	99.4	21	+	APP	367	588	97.8	21	-	hg38	exon-intron	25917688-25957686;25907688-25957686	K562;K562
APP	56	386	98.5	21	+	APP	383	584	98.6	21	-	hg38	exon-intron	25917688-25957686;25907688-25957686	K562;K562
ARF1	1	79	100	1	-	ARF1	79	314	99.6	1	+	hg38	exon-exon	228092299-228092299	K562
ARF1	19	86	98.6	1	-	ARF1	77	526	100	1	+	hg38	exon-exon	228092299-228092299	K562
ARF5	1	125	100	7	+	ARF5	122	253	100	7	-	hg38	exon-exon	127589946-127589946	GM12878,hESC
ARF5	2	274	98.6	7	+	ARF5	262	487	99.6	7	-	hg38	exon-exon	127589946-127589946	GM12878,hESC
ARHGEF4	1	80	100	2	+	C2orf27A	80	509	100	2	+	hg38	exon-exon	130972427-131742427;130962427-131742427	IMR90;IMR90
ARID4B	3	70	100	1	-	ARID4B	66	271	97.6	1	+	hg38	exon-exon	235186685-235186685;235176685-235186685;235176685-235176685	GM12878;GM12878;GM12878
ARIH1	23	177	98.3	15	-	PKM	178	720	98.3	15	-	hg38	intron-exon	72217659-72537659;72217659-72527659;72207659-72537659;72207659-72527659	HAP1;HAP1;HAP1;HAP1
ARSG	29	83	100	17	+	WIPI1	81	310	100	17	-	hg38	exon-exon	68413859-68423859;68413859-68413859	GM12878;GM12878
ARSG	13	138	100	17	-	ARSG	132	229	100	17	+	hg38	exon-exon	68313859-68313859;68303859-68313859;68303859-68303859	GM12878,NHEK;GM12878,NHEK;GM12878,NHEK
ARVCF	1	126	98.6	22	-	COMT	113	214	98.6	22	-	hg38	intron-exon	19972477-19972477	IMR90
ARVCF	1	408	98.2	22	-	COMT	198	502	98.2	22	-	hg38	intron-exon	19972477-19972477	IMR90
ARVCF	1	407	98.2	22	-	COMT	197	501	98.2	22	-	hg38	intron-exon	19972477-19972477	IMR90
ARVCF	1	409	98.1	22	-	COMT	336	469	98.1	22	-	hg38	intron-exon	19972477-19972477	IMR90
ARVCF	1	478	99.9	22	-	COMT	479	547	99.9	22	-	hg38	intron-exon	19972477-19972477	IMR90
ARVCF	10	491	98.7	22	-	COMT	281	680	98.7	22	-	hg38	intron-exon	19972477-19972477	IMR90
ATE1	1	261	100	10	+	ATE1	257	318	100	10	-	hg38	exon-exon	121750485-121750485	HAP1
ATG2A	10	256	100	11	-	SRRM2	249	397	99.4	16	-	hg38	exon-exon	64912528-2759999;64902528-2759999	GM12878;GM12878
ATG3	298	695	98.9	3	-	SLC35A5	696	896	98.9	3	-	hg38	exon-exon	112551153-112571153;112561153-112571153	NHEK;GM12878,NHEK
ATG5	17	74	100	6	+	ATG5	69	532	100	6	-	hg38	exon-exon	106182125-106192125	K562
ATG7	1	174	100	3	+	VGLL4	164	360	99.5	3	-	hg38	intron-exon	11558526-11568526;11558526-11558526	RPE1;RPE1
ATIC	18	118	99.1	2	-	ATIC	113	236	100	2	+	hg38	exon-exon	215355277-215355277	GM12878
ATP6V0A1	1	272	100	17	-	HLCS	264	386	99.2	21	-	hg38	exon-intron	42457982-36827700	IMR90
ATP6V0D1	21	124	100	16	-	ATP6V0D1	117	212	98	16	+	hg38	exon-exon	67436097-67436097	IMR90,HMEC,K562
ATP6V1C2	1	113	99.2	2	+	PDIA6	106	179	100	2	-	hg38	exon-intron	10779874-10779874;10779874-10789874	hESC;RPE1
ATP6V1C2	17	466	97.8	2	-	MDM4	455	577	99.2	1	+	hg38	intron-exon	204550872-10769874	GM12878
ATP6V1G1	5	164	97.5	9	-	ATP6V1G1	159	375	99.6	9	+	hg38	exon-exon	114597720-114597720;114587720-114597720	KBM-7;KBM-7
ATPAF2	1	512	99.8	17	-	LOC107984989	513	1298	99.8	17	-	hg38	exon-intron	17976686-18036686	NHEK
AUNIP	16	257	96.2	1	-	MTFR1L	188	362	96.2	1	-	hg38	exon-exon	25823509-25833509;25823509-25823509	GM12878;GM12878
B3GAT2	3	232	99.2	6	+	B3GAT2	226	553	98.8	6	-	hg38	exon-exon	70870297-70960297;70860297-70960297	IMR90-Dixon;IMR90-Dixon
B4GALT1	27	211	97.3	9	+	B4GALT1	207	266	100	9	-	hg38	exon-exon	33120002-33120002;33110002-33120002;33110002-33110002	GM12878;GM12878;GM12878
BAD	10	119	100	11	+	BAD	115	374	98.9	11	-	hg38	exon-exon	64272528-64272528	IMR90
BAHD1	32	84	100	15	-	BAHD1	83	150	100	15	+	hg38	exon-exon	40457801-40457801	HUVEC
BAHD1	29	82	100	15	-	BAHD1	81	349	96.6	15	+	hg38	exon-exon	40457801-40457801	HUVEC
BAMBI	16	287	99.3	10	-	BAMBI	276	416	100	10	+	hg38	exon-exon	28691071-28691071	HAP1
BAZ1B	21	131	100	7	+	LINC01004	123	446	99.7	7	-	hg38	intron-exon	73475670-104989553	HUVEC
BAZ2B	1	110	100	2	+	BAZ2B	103	607	97.4	2	-	hg38	exon-exon	159323489-159323489;159313489-159323489	IMR90-Dixon;IMR90-Dixon
BCAP31	38	97	98.4	X	+	BCAP31	91	330	96.3	X	-	hg38	exon-exon	153704545-153714545	NHEK
BCL2L12	7	222	99.6	19	-	LENG8	222	659	98.9	19	-	hg38	exon-exon	49666743-54458821	IMR90
BCL2L12	6	221	99.6	19	-	LENG8	221	445	100	19	-	hg38	exon-exon	49666743-54458821	IMR90
BCL7C	75	151	96.8	16	+	CTF1	152	288	96.8	16	+	hg38	intron-exon	30868679-30898679;30858679-30898679	GM12878;GM12878
BCOR	1	5276	100	X	-	CCNB3	5264	9117	100	X	+	hg38	exon-exon	40080747-50317000	GM12878
BECN1	1	224	100	17	-	BECN1	220	467	99.2	17	+	hg38	exon-exon	42817982-42817982	IMR90,NHEK
BEST1	26	497	97.2	11	+	FTH1	498	559	97.2	11	+	hg38	intron-exon	61962528-61972528	KBM-7
BLCAP	9	1289	100	20	-	FTH1P10	1281	2201	96.6	5	-	hg38	exon-intron	37521598-17359891	KBM-7
BMP2	1	123	97.6	20	-	BMP2	117	255	100	20	+	hg38	exon-exon	6779353-6779353;6769353-6779353;6769353-6769353	GM12878;GM12878;GM12878
BORA	9	324	98.8	13	-	DIS3	316	621	98.4	13	-	hg38	exon-intron	72745862-72755862	IMR90-Dixon,HUVEC
BORA	6	323	98.2	13	-	DIS3	315	566	97.9	13	-	hg38	exon-intron	72745862-72755862	IMR90-Dixon,HUVEC
BRD7	21	228	99.6	16	+	BRD7	224	456	98.3	16	-	hg38	exon-exon	50336089-50366089;50326089-50366089	K562;K562
BTF3	1	97	100	5	+	GGA1	95	459	100	22	+	hg38	intron-exon	37623993-73504175	GM12878
BUB1B	64	134	97.2	15	-	BUB1B	130	256	98.5	15	+	hg38	exon-exon	40167799-40167799;40157799-40167799;40157799-40157799	KBM-7;KBM-7;KBM-7
C12orf73	17	276	98.6	12	-	HSP90B1	277	485	98.6	12	-	hg38	intron-exon	103946222-103946222	HAP1
C14orf178	2	63	99.7	14	-	SNW1	64	582	99.7	14	-	hg38	intron-exon	77743657-77763657;77743657-77753657;77733657-77763657;77733657-77753657	GM12878;GM12878;GM12878;GM12878
C14orf178	1	73	99.9	14	-	SNW1	74	581	99.9	14	-	hg38	intron-exon	77743657-77763657;77743657-77753657;77733657-77763657;77733657-77753657	GM12878;GM12878;GM12878;GM12878
C16orf95	7	308	99.8	16	+	FBXO31	309	450	99.8	16	+	hg38	exon-exon	87306394-87336394	GM12878
C5orf66	18	113	99	5	+	MACROH2A1	109	343	100	5	-	hg38	intron-exon	135344310-135344310;135334310-135354310;135334310-135344310	GM12878;GM12878;GM12878
C5orf66	14	111	99	5	+	MACROH2A1	104	500	100	5	-	hg38	intron-exon	135344310-135344310;135334310-135344310;135334310-135334310	GM12878;GM12878;GM12878
C6orf89	1	94	100	6	-	C6orf89	88	352	99.3	6	+	hg38	exon-exon	36922224-36922224	HUVEC
C8orf82	1	74	100	8	-	LRRC24	75	1762	100	8	-	hg38	exon-exon	144524616-144524616	IMR90
CABP7	1	396	98.8	22	+	ZMAT5	397	656	98.8	22	+	hg38	exon-exon	29734011-29744011;29734011-29734011;29724011-29744011;29724011-29734011	GM12878;GM12878;GM12878;GM12878
CACNA1C	1	359	100	12	+	MNAT1	357	480	100	14	+	hg38	exon-exon	2060834-60873282	GM12878
CACNA1F	16	198	99.5	X	+	CACNA1F	184	248	100	X	-	hg38	exon-exon	49203540-49213540;49203540-49203540	GM12878;GM12878
CALM1	8	465	98.9	14	+	CALM1	461	553	100	14	-	hg38	exon-exon	90403656-90413656;90403656-90403656	GM12878;GM12878
CAMKK2	44	169	96	12	+	VAV2	165	240	100	9	-	hg38	exon-intron	121252197-133914878	GM12878
CAMKK2	44	169	96	12	+	VAV2	165	238	100	9	-	hg38	exon-intron	121252197-133914878	GM12878
CAPN10	1	413	100	2	+	GPR35	414	1267	100	2	+	hg38	exon-exon	240590583-240610583	GM12878
CAPN10	13	454	99.8	2	-	CAPN10	448	533	100	2	+	hg38	exon-exon	240590583-240600583	GM12878
CAPN12	1	98	99.3	19	-	LOC107985291	99	393	99.3	19	-	hg38	exon-intron	38719360-38739360	GM12878
CAPZB	6	76	100	1	+	CAPZB	73	256	100	1	-	hg38	exon-exon	19333506-19333506	hESC
CAPZB	19	80	98.4	1	+	CAPZB	77	629	99.9	1	-	hg38	exon-exon	19333506-19333506	hESC
CARD8	1	138	100	19	-	CARD8	134	223	98.9	19	+	hg38	exon-exon	48216743-48216743	GM12878,HAP1
CASKIN2	1	126	99	17	-	TMEM94	127	455	99	17	-	hg38	exon-exon	75493919-75503919	KBM-7
CASP2	6	413	99.6	7	+	CASP2	410	561	98.7	7	-	hg38	exon-exon	143302907-143302907;143292907-143302907;143292907-143292907	IMR90;IMR90;IMR90
CAST	1	241	100	5	-	ERAP1	237	445	99.6	5	-	hg38	exon-intron	96724296-96774296	K562
CBFB	1	387	99.8	16	+	MYH11	388	744	99.2	16	-	hg38	intron-exon	15726143-67086097	GM12878
CBX3	1	134	100	7	-	CCDC32	135	405	100	15	+	hg38	exon-intron	40557801-26210380	GM12878
CBX3	2	114	100	7	-	CCDC32	111	357	100	15	+	hg38	exon-exon	40557801-26210380	GM12878
CCDC103	1	1769	100	17	-	NCALD	1758	1837	98.8	8	-	hg38	intron-exon	44902632-101687772	GM12878
CCDC28A	1	516	100	6	+	IL22RA2	516	576	100	6	-	hg38	exon-exon	137168863-138788863;137168863-138778863;137158863-138788863;137158863-138778863	KBM-7;KBM-7;KBM-7;KBM-7
CCDC28A	1	500	100	6	+	IL22RA2	501	719	100	6	-	hg38	intron-exon	137168863-138788863;137168863-138778863;137158863-138788863;137158863-138778863	KBM-7;KBM-7;KBM-7;KBM-7
CCDC32	1	83	98.8	15	-	CBX3	84	499	98.8	7	+	hg38	exon-exon	40557801-26210380	GM12878
CCDC34	18	284	100	11	+	CCDC34	281	334	100	11	-	hg38	exon-exon	27358453-27358453	K562
CCNI	9	127	100	4	+	CCNI	128	470	99.2	4	-	hg38	exon-exon	77048847-77068847	IMR90,K562
CCNP	5	105	99.1	19	+	CCNP	97	470	99.8	19	-	hg38	exon-exon	40224093-40224093	KBM-7
CCNP	5	105	99.1	19	+	CCNP	97	304	98.6	19	-	hg38	exon-exon	40224093-40224093	KBM-7
CCSER2	1	148	100	10	+	R3HCC1L	149	541	99.8	10	+	hg38	exon-exon	84480244-98190243;84470244-98190243;84470244-98180243	GM12878;GM12878;GM12878
CCT4	14	163	100	2	+	CCT4	158	381	100	2	-	hg38	exon-exon	61862865-61872865;61862865-61862865	NHEK;NHEK
CCT7	1	77	100	2	+	CCT7	74	176	100	2	-	hg38	exon-exon	73252872-73252872	NHEK
CCT7	18	220	100	2	-	CCT7	216	486	99.7	2	+	hg38	exon-exon	73252872-73252872	NHEK
CD163	2	333	99.1	12	-	A2ML1	326	441	99.2	12	+	hg38	exon-exon	7497404-8867404;7497404-8857404	GM12878;HAP1
CD163	23	175	99.4	12	-	CD163	171	242	100	12	+	hg38	exon-exon	7497404-7507404;7497404-7497404;7507404-7507404	HAP1;GM12878,HAP1;hESC,HAP1
CD34	10	77	100	1	+	CD34	73	149	96.1	1	-	hg38	exon-exon	207886655-207896655;207886655-207886655;207876655-207896655;207876655-207886655	K562;K562;K562;K562
CD44	1	204	100	11	+	PDHX	200	567	99.8	11	+	hg38	exon-exon	34938453-35148453;34938453-35138453;34928453-35148453;34928453-35138453	GM12878;GM12878;GM12878;GM12878
CD46	1	61	100	1	-	CD46	57	694	100	1	+	hg38	exon-exon	207776655-207776655;207766655-207776655	GM12878;GM12878
CD55	1	238	99.6	1	+	CD34	235	373	97.9	1	-	hg38	exon-exon	207346655-207896655;207336655-207896655	K562;K562
CD74	1	54	100	5	-	ASCC2	55	611	99.9	22	-	hg38	exon-exon	29784011-150400437	KBM-7
CD80	1	450	100	3	-	TIMMDC1	451	503	100	3	-	hg38	exon-exon	119521153-119531153	IMR90-Dixon
CD80	1	458	100	3	-	TIMMDC1	459	516	100	3	-	hg38	exon-exon	119521153-119531153	IMR90-Dixon
CD9	1	88	100	12	+	LOC105369625	85	156	100	12	-	hg38	exon-intron	6230834-6230834;6230834-6240834	IMR90;IMR90-Dixon
CD9	146	303	97.6	12	-	CD9	297	546	99.6	12	+	hg38	exon-exon	6230834-6230834;6220834-6230834;6230834-6240834	IMR90;IMR90;IMR90-Dixon
CD99L2	41	122	100	X	+	CD99L2	116	530	99.3	X	-	hg38	exon-exon	150771527-150771527	IMR90
CDH1	55	187	100	16	-	CDH1	186	452	100	16	+	hg38	exon-exon	68816097-68816097	RPE1
CDK13	185	239	98.2	7	-	CDK13	236	626	99.5	7	+	hg38	exon-exon	40090401-40100401;40090401-40090401;40080401-40100401;40080401-40090401	HMEC;HMEC;HMEC;HMEC
CDK5R2	23	316	98	2	-	CRAMP1	309	445	98.6	16	+	hg38	exon-intron	1629999-218965278	GM12878
CDK5RAP2	1	112	100	9	+	CDK5RAP2	106	258	100	9	-	hg38	exon-exon	120397722-120397722;120387722-120397722;120387722-120387722	GM12878;GM12878;GM12878
CDKL5	1	350	99.8	X	+	SH3KBP1	348	578	100	X	-	hg38	exon-exon	18511880-19651882;18511880-19641882;18501880-19651882;18501880-19641882	GM12878;GM12878;GM12878;GM12878
CELSR3	1	74	98.7	3	-	NCKIPSD	68	226	100	3	-	hg38	exon-intron	48642567-48682567;48642567-48672567	GM12878;IMR90
CELSR3	300	10205	100	3	-	SLC26A6	10206	12561	100	3	-	hg38	exon-intron	48622567-48662567;48622567-48652567;48632567-48662567;48632567-48652567	IMR90;IMR90;GM12878,IMR90;GM12878,IMR90
CEMIP2	10	174	98.2	9	+	CEMIP2	165	506	99	9	-	hg38	exon-exon	71685084-71685084;71675084-71685084;71675084-71675084	GM12878;GM12878;GM12878
CEMIP2	10	174	98.2	9	+	CEMIP2	165	415	100	9	-	hg38	exon-exon	71685084-71685084;71675084-71685084;71675084-71675084	GM12878;GM12878;GM12878
CEP43	1	389	100	6	+	TAGAP	386	2038	100	6	-	hg38	exon-exon	159028968-167006512;159038968-167006512	IMR90,NHEK;IMR90,RPE1
CEP43	3	393	100	6	-	GABRR2	388	466	96	6	+	hg38	exon-intron	89280281-167046512;89280281-167036512	GM12878;GM12878
CERCAM	19	98	100	9	+	CERCAM	92	177	100	9	-	hg38	exon-exon	128427721-128427721	KBM-7
CFAP69	3	493	99.4	7	-	CFAP69	488	603	100	7	+	hg38	exon-exon	90310686-90320686;90300686-90320686	RPE1;RPE1
CGA	1	82	100	6	+	CGA	78	513	99.6	6	-	hg38	exon-exon	87090282-87090282	GM12878
CGAS	1	1410	99.9	6	-	DDX43	1411	1917	99.9	6	-	hg38	exon-intron	73410277-73450277	GM12878
CHD2	1	624	100	15	+	POLI	622	2988	100	18	+	hg38	exon-exon	92906770-54263630	GM12878
CHD2	10	130	98.4	15	-	CHD2	127	312	100	15	+	hg38	exon-exon	93026770-93026770	GM12878
CHD2	15	443	99.4	15	-	CHD2	438	503	100	15	+	hg38	exon-exon	93026770-93026770	GM12878
CHD4	8	152	100	12	+	CHD4	144	371	100	12	-	hg38	exon-exon	6570834-6580834;6570834-6570834	GM12878;GM12878
CHD4	18	388	98.7	12	+	CHD4	369	652	99.7	12	-	hg38	exon-exon	6570834-6580834;6570834-6590834	GM12878;HUVEC
CHD4	1	423	99.8	12	+	CHD4	420	774	99.2	12	-	hg38	exon-exon	6570834-6580834;6570834-6590834	GM12878;HUVEC
CHL1	15	142	100	3	-	CHL1	140	468	98.8	3	+	hg38	exon-exon	408317-408317	IMR90
CHORDC1	1	254	100	11	+	DISC1FP1	255	341	100	11	+	hg38	intron-exon	90226832-90546832;90226832-90536832;90216832-90546832;90216832-90536832	K562;K562;K562;K562
CHTOP	1	219	100	1	+	S100A1	217	331	99.2	1	+	hg38	intron-exon	153627524-153627524	HUVEC
CIC	13	66	100	19	-	CIC	64	527	99.4	19	+	hg38	exon-exon	42285848-42285848	GM12878
CIRBP	12	85	97.3	19	-	CIRBP	73	211	100	19	+	hg38	exon-exon	1280001-1280001	IMR90
CISH	1	72	100	3	-	CISH	63	157	99	3	+	hg38	exon-exon	50602569-50602569	hESC
CKAP4	9	86	100	12	+	CKAP4	79	286	100	12	-	hg38	exon-exon	106246222-106246222;106236222-106246222;106236222-106236222	hESC;hESC;hESC
CKAP4	18	239	98.7	12	+	CKAP4	233	316	100	12	-	hg38	exon-exon	106246222-106246222;106236222-106246222;106236222-106236222	hESC;hESC;hESC
CKB	29	114	98.9	14	-	CKB	111	223	100	14	+	hg38	exon-exon	103513663-103513663	hESC
CKB	16	112	99	14	-	CKB	109	221	100	14	+	hg38	exon-exon	103513663-103513663	hESC
CLDN10	1	69	100	13	+	DZIP1	70	529	100	13	+	hg38	exon-exon	95577746-95597746	IMR90-Dixon
CLDN11	1	590	100	3	+	SLC7A14-AS1	591	1139	100	3	+	hg38	exon-exon	170432212-170712211;170432212-170702211;170422212-170712211;170422212-170702211	GM12878;GM12878;GM12878;GM12878
CLSPN	22	219	98	1	+	CLSPN	213	582	96.8	1	-	hg38	exon-exon	35754399-35754399;35744399-35754399;35744399-35744399	GM12878;GM12878;GM12878
CLSTN1	13	93	100	1	+	CLSTN1	91	938	98.3	1	-	hg38	exon-exon	9739942-9739942;9729942-9729942	IMR90;K562
CLSTN1	12	92	100	1	+	CLSTN1	90	785	98.9	1	-	hg38	exon-exon	9739942-9739942;9729942-9729942	IMR90;K562
CLU	44	218	98.9	8	+	CLU	216	291	100	8	-	hg38	exon-exon	27602483-27602483	IMR90
CLU	105	222	100	8	+	CLU	221	440	96.4	8	-	hg38	exon-exon	27602483-27602483	IMR90
CLU	27	115	97.8	8	-	CLU	108	226	100	8	+	hg38	exon-exon	27602483-27602483	IMR90
CMTM6	1	81	100	3	+	CMTM6	79	548	100	3	-	hg38	exon-exon	32478508-32498508;32488508-32498508	RPE1;GM12878,HUVEC,RPE1
CMTR2	9	69	98.4	16	+	CMTR2	62	436	99.8	16	-	hg38	exon-exon	71286097-71286097	GM12878
CNDP2	1	172	100	18	-	SLC17A9	162	418	99.7	20	+	hg38	intron-exon	74512765-62948648	GM12878
CNKSR1	12	144	97.8	1	-	CNKSR1	135	230	100	1	+	hg38	exon-exon	26183509-26183509	GM12878
CNKSR3	14	104	99.7	6	-	IPCEF1	105	593	99.7	6	-	hg38	intron-exon	154208866-154408866	HMEC
CNKSR3	1	195	100	6	-	IPCEF1	196	771	100	6	-	hg38	exon-exon	154208866-154408866	HMEC
CNKSR3	1	1369	100	6	-	IPCEF1	1370	2700	100	6	-	hg38	exon-exon	154158865-154508866	KBM-7
CNNM3	8	226	99.1	2	+	CNNM3	219	340	99.2	2	-	hg38	exon-exon	96834263-96834263;96824263-96834263;96824263-96824263	GM12878;GM12878;GM12878
CNNM3	5	143	98.6	2	+	CNNM3	136	355	99.1	2	-	hg38	exon-exon	96834263-96834263;96824263-96834263;96824263-96824263	GM12878;GM12878;GM12878
CNPPD1	1	199	100	2	+	CNPPD1	196	287	100	2	-	hg38	exon-exon	219175278-219175278	GM12878,HUVEC
CNPY3	73	127	100	6	-	CNPY3	125	855	98.3	6	+	hg38	exon-exon	42932262-42932262	GM12878
COL1A2	8	91	100	7	-	COL1A2	87	501	98.3	7	+	hg38	exon-exon	94430688-94440688	KBM-7
COL1A2	5	425	98.1	7	-	COL1A2	421	504	100	7	+	hg38	exon-exon	94430688-94440688	KBM-7
COL5A1	14	218	100	9	-	LOC101448202	214	432	100	9	-	hg38	exon-intron	134738154-134828154	IMR90-Dixon
COLGALT1	2	236	97.9	19	+	COLGALT1	219	334	99.2	19	-	hg38	exon-exon	17579191-17579191;17569191-17579191	GM12878;GM12878
COMMD6	14	154	100	13	+	COMMD6	150	239	100	13	-	hg38	exon-exon	75535864-75535864;75525864-75535864	IMR90;IMR90
COMMD9	46	241	100	11	+	COMMD9	240	534	99	11	-	hg38	exon-exon	36278450-36278450;36268450-36278450;36268450-36268450	NHEK;NHEK;NHEK
COMT	9	71	100	22	-	COMT	67	497	98.9	22	+	hg38	exon-exon	19972477-19972477	IMR90
COPB2	1	234	100	3	-	MRPS22	126	521	100	3	-	hg38	exon-exon	139351158-139361158	IMR90
COPB2	1	234	98.5	3	-	MRPS22	126	449	98.5	3	-	hg38	exon-exon	139351158-139361158	IMR90
COPS2	7	73	100	15	+	COPS2	70	402	99.4	15	-	hg38	exon-exon	49127803-49127803;49117803-49127803;49117803-49117803	NHEK;NHEK;NHEK
COX15	2	151	98.6	10	+	CUTC	152	622	98.6	10	+	hg38	exon-exon	99730243-99730243	NHEK
CPD	7	459	100	17	-	CPD	454	551	100	17	+	hg38	exon-exon	30382982-30382982	IMR90
CPLX2	11	197	100	5	-	CPLX2	192	295	97.1	5	+	hg38	exon-exon	175882997-175882997	K562
CPLX2	1	75	100	5	-	CPLX2	70	138	100	5	+	hg38	exon-exon	175882997-175882997	K562
CREB3L2	1	464	100	7	-	IKZF1	464	521	100	7	+	hg38	exon-exon	50382302-137995254	GM12878
CREBBP	24	98	100	16	-	CREBBP	95	226	99.3	16	+	hg38	exon-exon	3729999-3729999;3719999-3729999;3719999-3719999	GM12878;GM12878;GM12878
CREBBP	1	157	99.4	16	-	CREBBP	155	220	100	16	+	hg38	exon-exon	3749999-3749999	GM12878
CRISP3	1	122	99.2	6	-	CRISP3	112	276	99.4	6	+	hg38	exon-exon	49732287-49732287;49722287-49732287;49722287-49722287	GM12878;GM12878,HAP1;GM12878,HAP1
CRTC2	1	94	96.8	1	-	CRTC2	85	168	96.4	1	+	hg38	exon-exon	153957524-153957524	K562
CRYBG1	2	339	99.5	6	+	RTN4IP1	336	456	100	6	-	hg38	exon-exon	106562125-106572125	KBM-7
CSNK1G1	17	130	99.2	15	+	CBX3	118	292	100	7	+	hg38	intron-exon	64207801-26220380	GM12878
CSNK1G3	7	72	98.5	5	+	CSNK1G3	69	255	96.7	5	-	hg38	exon-exon	123614306-123624306	KBM-7
CSRNP1	26	243	99.1	3	-	CSRNP1	239	331	100	3	+	hg38	exon-exon	39138509-39148509	hESC
CSRNP2	7	231	97.8	12	-	LETMD1	217	323	100	12	+	hg38	exon-intron	51056217-51066217	IMR90-Dixon
CST3	39	312	96	20	+	CST3	311	431	100	20	-	hg38	exon-exon	23629363-23639363	HMEC
CTNNA1	6	98	100	5	+	CTNNA1	95	167	97.3	5	-	hg38	exon-exon	138934311-138934311;138924311-138934311;138924311-138924311	GM12878;GM12878;GM12878
CTSF	1	214	100	11	+	CTSF	209	646	99.1	11	-	hg38	exon-exon	66572529-66572529	K562
CTSK	11	86	98.7	1	+	CTSK	80	1669	99.9	1	-	hg38	exon-exon	150787524-150797524	HUVEC
CTTNBP2	19	84	100	7	+	CTTNBP2	82	211	99.3	7	-	hg38	exon-intron	117769946-117769946;117759946-117769946;117759946-117759946	GM12878;GM12878;GM12878
CXCL14	19	200	98.9	5	+	CXCL14	198	375	100	5	-	hg38	exon-exon	135584310-135584310;135574310-135584310;135574310-135574310	KBM-7;KBM-7;KBM-7
CYB561D2	18	360	98	3	-	CYB561D2	348	412	97	3	+	hg38	exon-intron	50352569-50352569	GM12878
CYB561D2	1	262	100	3	-	PHYKPL	258	538	99.7	5	-	hg38	exon-exon	50362569-178212999	GM12878
CYP21A1P	1	876	100	6	+	CYP21A2	877	2215	100	6	+	hg38	exon-intron	32002223-32032223	GM12878
CYTH1	9	453	96.6	17	+	CYTH1	444	522	96.3	17	-	hg38	intron-exon	78673918-78683918	NHEK
CYTH2	1	58	100	19	-	CYTH2	51	458	96.6	19	+	hg38	exon-exon	48476743-48476743	NHEK
CZIB	1	305	99.4	1	-	MIR193BHG	302	390	96.6	16	-	hg38	exon-intron	53214328-14316143	GM12878
DAZAP2	11	411	99.7	12	+	LOC102723983	412	675	99.7	12	+	hg38	exon-exon	51246216-51266216;51236216-51266216	GM12878;GM12878
DAZAP2	48	176	99.3	12	-	DAZAP2	174	513	97.9	12	+	hg38	exon-exon	51246216-51246216;51236216-51246216;51236216-51236216	GM12878;GM12878;GM12878
DAZAP2	1	385	99.5	12	-	SMAGP	386	540	99.5	12	-	hg38	exon-exon	51246216-51256216;51246216-51246216;51236216-51256216;51236216-51246216	GM12878;GM12878;GM12878;GM12878
DCAF7	1	109	100	17	+	DCAF7	99	224	100	17	-	hg38	exon-exon	63572639-63582639	HAP1
DCAF7	1	102	100	17	+	DCAF7	96	480	100	17	-	hg38	exon-exon	63572639-63582639	HAP1
DDHD2	13	122	100	8	-	DDHD2	120	266	100	8	+	hg38	exon-exon	38272482-38282482	NHEK
DDTL	1	253	100	22	+	DDT	254	567	100	22	+	hg38	exon-exon	23967812-23967812	GM12878,IMR90,IMR90-Dixon,HMEC,HUVEC,hESC,HAP1,K562,KBM-7,NHEK,RPE1
DDTL	1	252	99.5	22	+	DDTL	252	510	100	22	-	hg38	exon-exon	23967812-23967812	GM12878,IMR90,IMR90-Dixon,HMEC,HUVEC,hESC,HAP1,K562,KBM-7,NHEK,RPE1
DDTL	16	269	99.6	22	+	DDTL	269	451	99	22	-	hg38	exon-exon	23967812-23967812	GM12878,IMR90,IMR90-Dixon,HMEC,HUVEC,hESC,HAP1,K562,KBM-7,NHEK,RPE1
DDTL	1	251	100	22	+	DDTL	251	410	100	22	-	hg38	exon-exon	23967812-23967812	GM12878,IMR90,IMR90-Dixon,HMEC,HUVEC,hESC,HAP1,K562,KBM-7,NHEK,RPE1
DDTL	18	276	100	22	+	DDTL	276	420	100	22	-	hg38	exon-exon	23967812-23967812	GM12878,IMR90,IMR90-Dixon,HMEC,HUVEC,hESC,HAP1,K562,KBM-7,NHEK,RPE1
DDTL	36	289	96.1	22	+	DDTL	289	386	96	22	-	hg38	exon-exon	23967812-23967812	GM12878,IMR90,IMR90-Dixon,HMEC,HUVEC,hESC,HAP1,K562,KBM-7,NHEK,RPE1
DDX21	1	96	100	10	+	DDX21	94	385	99	10	-	hg38	exon-exon	68960244-68960244;68970244-68970244;68960244-68970244	K562;K562,KBM-7;K562,KBM-7
DDX21	1	288	100	10	-	DDX21	282	607	99.7	10	+	hg38	exon-exon	68980244-68980244	KBM-7
DEF8	16	518	99.9	16	-	APLP2	514	703	100	11	-	hg38	exon-exon	130140105-89963592	GM12878
DIPK1A	194	561	98.9	1	-	RPL5	549	642	98.9	1	-	hg38	intron-exon	92824443-92834443	IMR90-Dixon
DIPK1B	30	311	98.5	9	+	SNHG7	312	361	98.5	9	+	hg38	intron-exon	136715548-136725548	GM12878
DIPK1B	1	433	100	9	+	SNHG7	434	540	100	9	+	hg38	intron-exon	136715548-136725548	GM12878
DIPK1B	8	190	100	9	-	DIPK1B	189	326	100	9	+	hg38	exon-exon	136715548-136725548	GM12878
DKK3	1	247	98	11	+	DKK3	245	448	98.6	11	-	hg38	exon-exon	11958453-11958453	NHEK
DLEC1	1	407	99.4	3	+	ACAA1	408	484	99.4	3	+	hg38	intron-exon	38128509-38128509;38118509-38128509;38118509-38118509	GM12878;GM12878;GM12878
DLGAP4	1	267	100	20	+	DLGAP4-AS1	265	333	98.6	20	-	hg38	exon-intron	36521597-36521597	K562
DNAAF4-CCPG1	1	650	100	15	-	DNAAF4-CCPG1	651	1299	100	15	-	hg38	exon-exon	55447802-55457802	HMEC
DNAJA2	1	362	100	16	-	NETO2	363	940	99.9	16	-	hg38	exon-exon	46976089-47086089;46976089-47076089;46966088-47086089	KBM-7;KBM-7;KBM-7
DNAJC16	1	185	100	1	+	AGMAT	186	260	100	1	+	hg38	exon-exon	15563505-15573505	GM12878
DNAJC3	8	135	100	13	+	DNAJC3	130	189	100	13	-	hg38	exon-exon	95797746-95797746	IMR90-Dixon
DNAJC4	1	109	100	11	-	DNAJC4	106	314	98.1	11	+	hg38	exon-exon	64232528-64232528	K562,RPE1
DNPH1	29	104	100	6	-	DNPH1	100	338	100	6	+	hg38	exon-exon	43232262-43232262	K562,NHEK
DPP9	1	482	99.1	19	+	ARHGAP1	481	680	97.3	11	+	hg38	exon-exon	46678450-4679988	GM12878
DPP9	2	167	97	19	+	DPP9	152	290	99.3	19	-	hg38	exon-exon	4689988-4699988;4699988-4699988	IMR90-Dixon;IMR90,IMR90-Dixon
DSC3	1	178	97.1	18	+	DSG2	179	1467	97.1	18	+	hg38	intron-exon	31040034-31540037	HMEC
DSP	39	162	99.2	6	-	DSP	155	221	100	6	+	hg38	exon-exon	7569767-7579767	GM12878
DST	22	437	99.8	6	-	DST	435	487	100	6	+	hg38	exon-exon	56535202-56535202;56525202-56535202	RPE1;RPE1
DTNA	1	442	100	18	+	RPRD1A	433	559	99.2	18	-	hg38	exon-exon	34800036-36000037;34790036-36000037	GM12878;GM12878
DVL3	29	283	98.5	3	-	DVL3	280	438	100	3	+	hg38	exon-exon	184152212-184162212	HAP1
DYRK2	1	60	98.4	12	+	DYRK2	54	347	99.7	12	-	hg38	exon-exon	67656220-67666220	KBM-7
DYRK2	1	60	98.4	12	+	DYRK2	54	327	100	12	-	hg38	exon-exon	67656220-67666220	KBM-7
DYRK2	1	59	98.4	12	+	DYRK2	53	202	100	12	-	hg38	exon-exon	67656220-67666220	KBM-7
DZIP1	21	157	100	13	+	DZIP1	152	651	99.6	13	-	hg38	exon-exon	95577746-95597746;95577746-95587746;95587746-95587746	IMR90-Dixon;IMR90-Dixon;IMR90-Dixon,HUVEC
ECE1	14	191	100	1	-	ECE1	186	243	100	1	+	hg38	intron-exon	21223507-21233507;21223507-21223507	KBM-7;KBM-7
ECPAS	44	335	98.7	9	+	ECPAS	331	432	99.1	9	-	hg38	exon-exon	111377720-111417720;111367720-111417720	RPE1;RPE1
EDC3	2	415	99.3	15	-	CLK3	297	654	99.3	15	-	hg38	intron-exon	74627659-74637659	NHEK
EEF1A2	1	178	99.5	20	+	EEF1A2	171	500	99.7	20	-	hg38	exon-exon	63488647-63498647;63488647-63488647	IMR90;IMR90
EEF1D	36	153	100	8	+	EEF1D	148	324	99.5	8	-	hg38	exon-exon	143587830-143587830	GM12878,K562
EEF1D	12	129	100	8	+	EEF1D	124	298	99.5	8	-	hg38	exon-exon	143587830-143587830	GM12878,K562
EEF1D	1	155	100	8	+	EEF1D	151	519	99.5	8	-	hg38	exon-exon	143587830-143587830	GM12878,K562
EEF1D	1	155	100	8	+	EEF1D	151	493	99.5	8	-	hg38	exon-exon	143587830-143587830	GM12878,K562
EEF1D	1	67	100	8	-	UBE2L3	67	596	100	22	+	hg38	exon-exon	21585711-143587830	GM12878
EEF2	21	113	96.8	19	+	EEF2	111	434	98.5	19	-	hg38	exon-exon	3980002-3980002;3970002-3970002	GM12878;K562
EEF2	16	225	98.1	19	+	EEF2	222	365	100	19	-	hg38	exon-exon	3980002-3980002	GM12878
EEF2	17	171	99.4	19	+	EEF2	165	376	100	19	-	hg38	exon-exon	3980002-3980002	GM12878
EEF2	1	309	98.1	19	-	EEF2	308	424	99.2	19	+	hg38	exon-exon	3980002-3980002;3970002-3970002	GM12878;K562
EEF2	16	71	100	19	-	EEF2	68	215	100	19	+	hg38	exon-exon	3980002-3980002;3970002-3970002	GM12878;K562
EEF2	1	188	100	19	-	LRRC4B	188	313	100	19	-	hg38	exon-intron	3980002-50536743	GM12878
EFCAB14-AS1	17	147	99.3	1	+	EFCAB14	140	337	100	1	-	hg38	intron-exon	46684328-46684328;46674328-46684328	GM12878;GM12878
EFCAB14-AS1	1	59	98.4	1	+	EFCAB14	54	452	99.8	1	-	hg38	intron-exon	46684328-46684328;46674328-46684328	GM12878;GM12878
EFNA2	1	939	99.2	19	+	EFNA2	934	1066	99.3	19	-	hg38	exon-exon	1300001-1300001;1290001-1300001	GM12878;GM12878,IMR90
EFNA5	1	137	100	5	+	RPS23	124	486	98.4	5	+	hg38	exon-exon	82274181-107384299	GM12878
EFNB2	10	123	98.2	13	+	EFNB2	116	550	96.5	13	-	hg38	exon-exon	106487652-106497652;106487652-106487652;106497652-106497652	RPE1;RPE1;GM12878,K562,RPE1
EGR1	6	58	100	5	+	EGR1	57	413	100	5	-	hg38	exon-exon	138464311-138464311	GM12878
EGR1	1	78	98.8	5	-	EGR1	70	160	100	5	+	hg38	exon-exon	138464311-138464311	GM12878
EHD4	1	161	98.2	15	+	EHD4	156	296	99.3	15	-	hg38	exon-exon	41907802-41907802	IMR90-Dixon,KBM-7
EHD4	1	173	98.9	15	+	EHD4	168	328	98.2	15	-	hg38	exon-exon	41907802-41907802	IMR90-Dixon,KBM-7
EHMT1	19	122	100	9	+	EHMT1	119	269	98.7	9	-	hg38	exon-exon	137725548-137725548	GM12878
EID1	8	255	99.6	15	+	SHC4	243	338	100	15	-	hg38	exon-intron	48887803-48887803;48877803-48887803	HUVEC;HUVEC
EID1	1	108	100	15	+	SHC4	96	232	99.3	15	-	hg38	exon-intron	48887803-48887803;48877803-48887803	HUVEC;HUVEC
EID1	39	182	100	15	+	SHC4	176	274	100	15	-	hg38	exon-intron	48887803-48887803;48877803-48887803	HUVEC;HUVEC
EIF2D	2	213	99.6	1	-	RASSF5	206	554	99.8	1	+	hg38	intron-exon	206586668-206596651	GM12878
EIF3H	1	179	99.5	8	-	EIF3H	175	287	99.2	8	+	hg38	exon-exon	116657761-116657761;116647761-116657761;116647761-116647761	IMR90-Dixon;IMR90-Dixon;IMR90-Dixon
EIF3H	6	195	99.5	8	-	EIF3H	191	303	100	8	+	hg38	exon-exon	116657761-116657761;116647761-116657761;116647761-116647761	IMR90-Dixon;IMR90-Dixon;IMR90-Dixon
EIF3I	1	354	98.9	1	+	ZBTB8B	355	407	98.9	1	+	hg38	exon-intron	32224399-32234399	IMR90-Dixon
EIF3J	1	653	99.1	15	+	SPG11	654	712	99.1	15	+	hg38	intron-exon	44557802-44567802	IMR90-Dixon
EIF5B	1	361	99.8	2	-	EIF5B	355	438	97.7	2	+	hg38	exon-exon	99373537-99393537	HAP1
EIF6	9	93	100	20	+	EIF6	89	272	100	20	-	hg38	exon-exon	35282197-35282197	KBM-7
EIF6	2	84	96.3	20	+	EIF6	71	148	98.8	20	-	hg38	exon-exon	35282197-35282197	KBM-7
EMILIN1	10	254	100	2	-	EMILIN1	251	466	97.7	2	+	hg38	exon-exon	27077132-27077132	IMR90
EML4	1	275	100	2	+	ALK	274	2014	99.8	2	-	hg38	exon-exon	29197134-42242860	IMR90
EML4	1	277	100	2	+	ALK	272	2131	99.8	2	-	hg38	exon-exon	29197134-42242860	IMR90
EML4	1	210	100	2	+	ALK	205	325	100	2	-	hg38	exon-exon	29227134-42242860	IMR90
EML4	9	343	100	2	-	LOC107985873	344	533	97.3	2	-	hg38	exon-intron	42252860-42322860;42262860-42322860	GM12878;GM12878,RPE1
ENO2	13	292	99.3	12	+	ATN1	293	426	99.3	12	+	hg38	exon-intron	6930837-6930837	HMEC
ENTPD1	1	75	98.7	10	+	ENTPD1-AS1	70	277	99.1	10	-	hg38	exon-intron	95870243-95870243;95860243-95870243	NHEK;NHEK
EP300	1	54	100	22	-	EP300	54	273	99.6	22	+	hg38	exon-exon	41173996-41173996;41173996-41183996	GM12878;KBM-7
EPAS1	1	216	99.1	2	-	SLC43A2	209	354	98	17	-	hg38	exon-intron	1606706-46382861	GM12878
EPCAM-DT	8	113	100	2	-	PPP1R21	104	483	99.8	2	+	hg38	exon-exon	47342861-48472861	K562
EPHA1	1	128	98.5	7	-	ZYX	129	571	98.5	7	-	hg38	exon-exon	143382907-143382907	GM12878
EPHA1	17	84	100	7	-	ZYX	78	773	99.9	7	+	hg38	exon-exon	143382907-143382907	GM12878
EPS15	8	77	100	1	-	EPS15	70	276	99.6	1	+	hg38	exon-exon	51364328-51364328;51354328-51354328	IMR90;IMR90,RPE1
EYA4	1	2297	100	6	+	TARID	1650	5701	100	6	+	hg38	exon-exon	133508862-133518862;133498862-133518862;133498862-133528862;133508862-133528862	GM12878;GM12878;GM12878,NHEK;RPE1
FAM222B	22	206	100	17	+	FAM222B	206	274	98.6	17	-	hg38	exon-exon	28762982-28762982	GM12878
FAM228B	1	190	99	2	-	FAM228B	183	250	100	2	+	hg38	intron-exon	24137130-24137130	NHEK
FAM50A	38	112	100	X	-	FAM50A	105	554	100	X	+	hg38	exon-exon	154451652-154451652	NHEK
FBLN1	1	105	100	22	-	FBLN1	95	204	100	22	+	hg38	exon-exon	45534120-45544120	HMEC
FBXL17	1	244	100	5	-	AHNAK	239	506	100	11	-	hg38	intron-exon	62522528-108174299	GM12878
FBXL2	7	86	97.5	3	+	FBXL2	79	235	99.4	3	-	hg38	exon-exon	33368508-33368508	IMR90
FBXL20	25	143	100	17	+	FBXL20	138	201	100	17	-	hg38	exon-exon	39263747-39263747;39253747-39263747;39253747-39253747	GM12878;GM12878;GM12878
FBXO11	1	75	100	2	+	LOC100506235	76	406	100	2	+	hg38	exon-exon	47902861-47902861	GM12878
FBXO17	1	475	100	19	-	SARS2	476	1967	100	19	-	hg38	intron-exon	38919360-38959360;38919360-38949360	HMEC;HMEC
FBXO7	1	124	100	22	+	FBXO7	120	307	100	22	-	hg38	exon-exon	32494013-32494013	GM12878
FCAR	78	150	100	19	+	FCAR	142	417	99.7	19	-	hg38	exon-exon	54878544-54888633;54878544-54878544	GM12878,KBM-7;GM12878,KBM-7
FILIP1L	1	55	98.2	3	-	CMSS1	53	328	100	3	+	hg38	exon-intron	99841156-99841156	GM12878
FKBP5	1	575	100	6	-	TMPRSS2	576	952	100	21	-	hg38	exon-exon	41488073-35682223	GM12878
FKBP8	18	85	100	19	+	MEGF8	73	664	100	19	-	hg38	exon-exon	18539190-42375848	GM12878,K562
FLNB	2	426	98.6	3	-	FLNB	418	524	100	3	+	hg38	exon-exon	58124273-58124273;58114273-58124273;58114273-58114273	GM12878;GM12878;GM12878,KBM-7
FMOD	107	166	98.4	1	+	FMOD	158	420	99.7	1	-	hg38	exon-exon	203330872-203340872	HUVEC
FN1	44	167	100	2	+	FN1	160	792	97	2	-	hg38	exon-exon	215365277-215365277;215355277-215375277;215355277-215365277	GM12878;GM12878;GM12878
FNBP1L	19	259	100	1	+	BCAR3	255	377	100	1	-	hg38	intron-exon	93554443-93554443;93554443-93564443	NHEK;NHEK,RPE1
FRS3	10	358	100	6	-	FRS3	357	409	100	6	+	hg38	exon-exon	41772262-41772262	IMR90,K562
FST	9	224	100	5	-	FST	219	462	100	5	+	hg38	exon-exon	53484170-53484170;53474170-53484170;53474170-53474170	GM12878;GM12878;GM12878
FST	1	64	100	5	-	FST	56	482	99.8	5	+	hg38	exon-exon	53484170-53484170;53494170-53494170;53484170-53494170	GM12878;GM12878,IMR90;GM12878,IMR90
FTH1	6	493	99.2	11	+	LOC399900	494	566	99.2	11	+	hg38	exon-exon	61962528-61972528	KBM-7
FTL	1	78	98.8	19	-	FTL	75	606	98.5	19	+	hg38	exon-exon	48966743-48966743	KBM-7
FTL	1	167	99.4	19	-	FTL	161	528	99.8	19	+	hg38	exon-exon	48966743-48966743	KBM-7
FTL	8	488	96.1	19	-	FTL	485	563	97.5	19	+	hg38	exon-exon	48966743-48966743	KBM-7
FTLP3	1	318	96.6	20	-	RNF24	319	375	96.6	20	-	hg38	exon-intron	3999353-4029353;3989353-4029353	HUVEC;HAP1
FXYD6	1	144	100	11	-	FXYD6-FXYD2	145	557	100	11	-	hg38	exon-intron	117839285-117869285;117829285-117869285	GM12878;GM12878
G6PC3	1	480	98.1	17	+	UBE2Z	291	772	96	17	-	hg38	exon-intron	44072632-48922638;44072632-48912638	GM12878;GM12878
GABPA	1	107	100	21	+	APP	104	580	99.8	21	-	hg38	exon-exon	25737689-26057684;25737689-26047684	GM12878;GM12878
GALNT6	15	325	100	12	+	GALNT6	321	451	97.8	12	-	hg38	exon-exon	51356216-51366216;51356216-51356216	GM12878;GM12878,hESC
GATAD2A	1	307	99.4	19	-	GATAD2A	302	494	100	19	+	hg38	exon-intron	19489191-19499191;19479191-19499191	KBM-7;KBM-7
GCN1	22	140	97.5	12	+	GCN1	133	791	98.5	12	-	hg38	exon-exon	120142196-120142196	RPE1
GDI2	7	140	99.3	10	-	TASOR2	133	249	100	10	+	hg38	exon-exon	5758037-5768037;5758037-5758037	HAP1;IMR90,NHEK
GDI2	1	174	99.5	10	-	GDI2	169	238	100	10	+	hg38	exon-exon	5758037-5768037;5758037-5758037	HAP1;IMR90,NHEK
GIMAP7	2	75	100	7	+	ZNF212	74	524	100	7	+	hg38	exon-exon	149252909-150522912;149242909-150522912	GM12878;GM12878
GIT1	1	313	99.1	17	+	CYB5D2	314	498	100	17	-	hg38	exon-intron	4146706-29582982	GM12878
GIT1	1	311	99.7	17	+	CYB5D2	312	465	100	17	-	hg38	exon-intron	4146706-29582982	GM12878
GNAI3	14	72	100	1	-	GNAI3	66	574	99.9	1	+	hg38	exon-exon	109587378-109587378	HUVEC
GNPDA1	2	82	100	5	+	GNPDA1	78	377	98.7	5	-	hg38	exon-exon	142000435-142010435;142010435-142010435;142000435-142000435	GM12878,IMR90,HMEC,HUVEC,NHEK;GM12878,IMR90,HMEC,K562,NHEK;GM12878,IMR90,HMEC,HUVEC,HAP1,K562,KBM-7,NHEK,RPE1
GNPDA1	1	79	100	5	+	GNPDA1	75	363	98.3	5	-	hg38	exon-exon	142000435-142010435;142010435-142010435;142000435-142000435	GM12878,IMR90,HMEC,HUVEC,NHEK;GM12878,IMR90,HMEC,K562,NHEK;GM12878,IMR90,HMEC,HUVEC,HAP1,K562,KBM-7,NHEK,RPE1
GNPDA1	13	200	99.5	5	+	GNPDA1	195	578	100	5	-	hg38	exon-exon	142000435-142010435;142010435-142010435;142000435-142000435	GM12878,IMR90,HMEC,HUVEC,NHEK;GM12878,IMR90,HMEC,K562,NHEK;GM12878,IMR90,HMEC,HUVEC,HAP1,K562,KBM-7,NHEK,RPE1
GNPNAT1	17	112	98	14	+	STYX	112	323	98.6	14	+	hg38	intron-exon	52783282-52783282	GM12878
GORASP2	11	234	99.6	2	-	GORASP2	230	342	100	2	+	hg38	exon-exon	170963490-170963490	K562
GPATCH8	1	390	100	17	+	GPATCH8	388	481	100	17	-	hg38	exon-exon	44402632-44402632;44392632-44402632;44392632-44392632	GM12878;GM12878;GM12878
GPN1	1	253	99.7	2	+	GPN1	254	397	99.4	2	-	hg38	exon-exon	27637133-27647133;27637133-27637133	GM12878;GM12878
GPN1	1	1048	100	2	+	SUPT7L	941	2445	100	2	+	hg38	exon-intron	27647133-27647133	GM12878
GPR108	1	252	100	19	-	PDE4A	248	320	100	19	+	hg38	exon-exon	6729989-10469324	HAP1
GRINA	17	90	98.7	8	-	GRINA	88	646	96.7	8	+	hg38	exon-exon	143995832-143995832	IMR90-Dixon,RPE1
GRM3	1	165	100	7	-	ABCB1	164	235	100	7	-	hg38	intron-exon	86690684-87600684	IMR90
GSEC	18	536	99.9	11	-	DCPS	426	602	99.9	11	-	hg38	intron-exon	126340105-126350105;126330105-126350105	GM12878;GM12878
GSN	25	160	97.1	9	+	GSN	151	280	100	9	-	hg38	exon-exon	121317722-121327722;121317722-121317722	IMR90-Dixon;IMR90-Dixon
GTF3C2	7	138	100	2	+	GTF3C2	132	282	99.4	2	-	hg38	exon-exon	27327133-27337133;27337133-27337133;27327133-27327133	K562;IMR90,K562;K562,NHEK
GTPBP8	1	951	100	3	+	NEPRO	952	1635	100	3	+	hg38	exon-intron	113001153-113011153;112991153-113011153	GM12878;GM12878
GUCD1	27	126	96	22	+	GUCD1	121	222	98.1	22	-	hg38	exon-exon	24544032-24544032	IMR90
GUCY1A1	1	226	100	4	+	GPM6A	224	561	100	4	-	hg38	exon-exon	155728848-175668849	GM12878
GUK1	1	65	100	1	+	ARF1	62	629	100	1	+	hg38	exon-exon	228092299-228142299	K562
H19	3	154	98.7	11	-	MRPL23	150	219	100	11	+	hg38	exon-intron	1998770-1998770	IMR90-Dixon,HAP1
H19	10	162	99.4	11	-	MRPL23	157	375	99.6	11	+	hg38	exon-intron	1998770-1998770	IMR90-Dixon,HAP1
H3-3B	42	115	98.7	17	+	H3-3B	114	495	100	17	-	hg38	exon-exon	75773919-75773919	IMR90-Dixon
H3-3B	1	68	100	17	-	H3-3B	65	197	100	17	+	hg38	exon-exon	75773919-75773919	IMR90-Dixon
H3-3B	1	57	100	17	-	H3-3B	58	182	98.4	17	+	hg38	exon-exon	75773919-75773919	IMR90-Dixon
HEXA	18	237	98.7	15	+	HEXA	235	510	100	15	-	hg38	exon-exon	72347659-72347659;72337659-72347659	IMR90;IMR90
HIGD1A	1	151	100	3	+	HIGD1A	144	364	100	3	-	hg38	exon-exon	42778508-42788508;42778508-42778508	RPE1;RPE1
HIGD1A	1	221	100	3	+	HIGD1A	214	365	100	3	-	hg38	exon-exon	42778508-42788508;42778508-42778508	RPE1;RPE1
HIKESHI	1	416	100	11	+	PICALM	416	558	97.9	11	-	hg38	exon-exon	86038958-86308958;86028958-86308958	HUVEC;HUVEC
HIVEP1	6	65	98.4	6	+	HIVEP1	62	246	100	6	-	hg38	exon-exon	12169767-12169767;12159767-12169767;12159767-12159767	GM12878;GM12878;GM12878
HIVEP1	5	64	98.4	6	+	HIVEP1	61	243	100	6	-	hg38	exon-exon	12169767-12169767;12159767-12169767;12159767-12159767	GM12878;GM12878;GM12878
HLA-DOB	8	136	100	6	+	HLA-DOB	133	535	100	6	-	hg38	exon-exon	32812223-32812223	GM12878
HLA-DPA1	7	64	100	6	+	HLA-DPA1	62	455	98.3	6	-	hg38	exon-exon	33072223-33072223;33062223-33072223;33062223-33062223	GM12878;GM12878;GM12878
HLA-DPA1	36	121	100	6	+	HLA-DPA1	122	197	100	6	-	hg38	exon-exon	33072223-33072223	GM12878
HLA-DPA1	1	407	99.8	6	-	NEAT1	401	530	96.9	11	+	hg38	exon-exon	65422529-33072223	GM12878
HPGDS	80	153	96.5	4	+	PDLIM5	154	361	96.5	4	+	hg38	intron-exon	94338849-94658849	KBM-7
HSD11B2	1	113	97.4	16	-	HSD11B2	99	275	100	16	+	hg38	exon-exon	67436097-67436097	IMR90,HMEC,K562
HSF1	1	102	100	8	-	HSF1	91	436	100	8	+	hg38	exon-exon	144296318-144296318;144286234-144296318;144286234-144286234	K562;K562;K562
HSF1	2	104	100	8	-	HSF1	93	506	96.7	8	+	hg38	exon-exon	144296318-144296318;144286234-144296318;144286234-144286234	K562;K562;K562
HSP90AB1	15	330	99.4	6	+	HSP90AB1	327	418	96.8	6	-	hg38	exon-intron	44252263-44252263;44242263-44252263;44242263-44242263	IMR90;IMR90;IMR90
HSP90AB1	13	515	99.1	6	-	HSP90AB1	511	603	97.9	6	+	hg38	exon-exon	44252263-44252263	IMR90
HSP90B1	28	93	98.5	12	-	HSP90B1	90	649	100	12	+	hg38	exon-exon	103946222-103946222	HAP1
HSP90B1	18	76	100	12	-	HSP90B1	71	267	100	12	+	hg38	exon-exon	103946222-103946222	HAP1
HSP90B1	51	180	99.3	12	-	HSP90B1	174	388	99.6	12	+	hg38	exon-exon	103946222-103946222	HAP1
HSP90B1	1	138	100	12	-	HSP90B1	136	210	100	12	+	hg38	exon-exon	103946222-103946222	HAP1
HSPA4	16	526	99.9	5	-	HSPA4	522	693	100	5	+	hg38	exon-exon	133084308-133114308	IMR90
HSPB8	15	338	97.2	12	+	KDM5B	335	449	99.2	1	+	hg38	exon-exon	202730872-119192195	K562
HSPG2	20	339	98.5	1	+	HSPG2	336	646	98.1	1	-	hg38	exon-intron	21873507-21923507	NHEK
HSPG2	25	340	100	1	+	HSPG2	337	650	98.5	1	-	hg38	intron-exon	21873507-21923507	NHEK
IDH3B	26	490	99	20	-	NOP56	491	619	99	20	-	hg38	exon-exon	2659354-2659354	KBM-7
IDS	17	345	100	X	+	IDS	343	454	100	X	-	hg38	exon-exon	149478469-149488469;149478469-149478469;149488469-149488469	KBM-7;KBM-7;IMR90-Dixon,KBM-7
IDS	1	187	100	X	-	LINC00893	185	313	100	X	+	hg38	exon-exon	149498469-149538467;149488469-149538467;149498469-149528463;149488469-149528463	KBM-7;KBM-7;HMEC,KBM-7;HMEC,KBM-7
IDS2	4	223	100	X	+	LOC106050102	222	443	100	X	+	hg38	exon-intron	149498469-149508470;149488469-149508470	KBM-7;KBM-7
IER5L	1	135	98.6	9	-	RRAGC	126	667	97	1	-	hg38	exon-exon	38854328-129177721	GM12878
IER5L	2	155	100	9	-	RRAGC	145	679	99.5	1	-	hg38	exon-exon	38854328-129177721	GM12878
IFI44L	1	175	97.8	1	+	IFI44L	165	234	98.6	1	-	hg38	exon-exon	78634315-78644315	IMR90,IMR90-Dixon
IFIH1	27	355	99.7	2	+	IFIH1	353	449	100	2	-	hg38	exon-exon	162313490-162313490	GM12878
IGH	1	286	99.7	14	-	IGHM	283	572	100	14	-	hg38	intron-exon	105653663-105853895;105653663-105863790;105643663-105863790	IMR90-Dixon;HMEC;HMEC
IGH	5	134	99.8	14	-	IGHG2	135	413	99.8	14	-	hg38	intron-exon	105643663-105653663;105643663-105643663;105653663-105653663	IMR90,HUVEC;HAP1,K562;NHEK
IGH	6	135	99.8	14	-	IGHG2	136	398	99.8	14	-	hg38	intron-exon	105643663-105653663;105643663-105643663;105653663-105653663	IMR90,HUVEC;HAP1,K562;NHEK
IGH	97	405	99.6	14	-	IGHA1	406	566	99.6	14	-	hg38	intron-exon	105703663-105703663	HUVEC
IGH	195	323	96.2	14	-	IGHA1	324	633	96.2	14	-	hg38	intron-exon	105703663-105703663	HUVEC
IGH	1	78	100	14	-	IGHM	75	244	99	14	-	hg38	intron-exon	105713663-105853895;105703663-105863790;105703663-105853895	HUVEC;K562;HUVEC,K562,RPE1
IGH	1	113	99.2	14	-	IGHM	110	399	100	14	-	hg38	intron-exon	105713663-105853895;105703663-105863790;105703663-105853895	HUVEC;K562;HUVEC,K562,RPE1
IGH	159	285	96.3	14	-	IGHG1	286	366	96.3	14	-	hg38	intron-exon	105733663-105743663;105733663-105733663;105743663-105743663	IMR90,KBM-7;hESC,KBM-7;IMR90,hESC,KBM-7,NHEK
IGH	1	223	100	14	-	IGHM	220	389	99.5	14	-	hg38	intron-exon	105743663-105863790;105743663-105853895	IMR90,KBM-7;IMR90,KBM-7
IGH	1	287	100	14	-	IGHM	284	573	100	14	-	hg38	intron-exon	105743663-105863790;105743663-105853895	IMR90,KBM-7;IMR90,KBM-7
IGH	1	108	99.1	14	-	IGHM	105	272	99.5	14	-	hg38	intron-exon	105783663-105863790	hESC
IGH	1	287	99.7	14	-	IGHM	284	573	100	14	-	hg38	intron-exon	105783663-105863790	hESC
IGH	4	88	99.5	14	-	IGHV4-39	89	397	99.5	14	-	hg38	intron-exon	106424094-106424094;106414086-106424094	GM12878;GM12878
IGH	1	700	96.2	14	-	IGHV4-39	701	1048	96.2	14	-	hg38	intron-exon	106414086-106464075;106424094-106464075	RPE1;GM12878,IMR90,RPE1
IGH	1	154	98.1	14	-	IGHV4-39	155	459	98.1	14	-	hg38	intron-exon	106424094-106483993	IMR90-Dixon
IGH	1	107	99.6	14	-	IGHV1-69D	108	411	99.6	14	-	hg38	intron-exon	106771758-106771758	IMR90,hESC,K562
IGHA1	30	162	100	14	+	IGHA1	162	395	99.6	14	-	hg38	exon-exon	105703663-105703663	HUVEC
IGHG1	7	102	99	14	+	IGHG1	101	274	98.9	14	-	hg38	exon-exon	105733663-105743663;105733663-105733663;105743663-105743663	IMR90,KBM-7;hESC,KBM-7;IMR90,hESC,KBM-7,NHEK
IGHG1	7	334	97.9	14	-	IGH	67	432	97.9	14	-	hg38	exon-intron	105673663-105733663;105663663-105733663;105673663-105743663;105663663-105743663	KBM-7;KBM-7;IMR90,KBM-7;IMR90,KBM-7
IGHG1	2	300	96.5	14	-	IGH	301	397	96.5	14	-	hg38	exon-intron	105673663-105733663;105663663-105733663;105673663-105743663;105663663-105743663	KBM-7;KBM-7;IMR90,KBM-7;IMR90,KBM-7
IGHG3	13	90	100	14	-	IGHG3	83	332	97.2	14	+	hg38	intron-exon	105763663-105773663;105773663-105773663	IMR90-Dixon;IMR90-Dixon,HUVEC
IGHG4	6	63	98	14	-	IGH	64	201	98	14	-	hg38	exon-intron	105623663-105623663	HAP1
IGHGP	7	140	97.1	14	-	IGHG1	138	437	99.7	14	+	hg38	exon-exon	105673663-105733663;105663663-105733663;105673663-105743663;105663663-105743663	KBM-7;KBM-7;IMR90,KBM-7;IMR90,KBM-7
IGHGP	79	439	97.1	14	-	IGHG2	440	762	97.1	14	-	hg38	exon-exon	105643663-105673663	HUVEC
IGHGP	95	390	96.1	14	-	IGHG3	391	736	96.3	14	-	hg38	exon-exon	105663663-105773663;105663663-105763663	KBM-7;K562,KBM-7
IGHJ5	143	192	98.9	14	-	IGHG2	193	658	98.9	14	-	hg38	exon-exon	105653663-105853895;105653663-105863790;105643663-105863790	IMR90-Dixon;HMEC;HMEC
IGHJ6	437	496	97.7	14	-	IGHA1	497	1599	97.7	14	-	hg38	exon-intron	105713663-105853895;105703663-105863790;105703663-105853895	HUVEC;K562;HUVEC,K562,RPE1
IGHM	6	65	100	14	+	IGHM	62	336	98.2	14	-	hg38	exon-intron	105853895-105853895	RPE1
IGHM	6	65	100	14	+	IGHM	62	268	97.6	14	-	hg38	exon-exon	105853895-105853895	RPE1
IGHM	2	61	100	14	+	IGHM	56	732	98.6	14	-	hg38	exon-intron	105843667-105863790;105843667-105853895;105853895-105853895	K562;K562;RPE1
IGHV4-59	1	177	97.2	14	-	IGHV4-30-2	178	287	97.2	14	-	hg38	exon-exon	106344077-106623986	HUVEC
IGK	4	67	97.6	2	+	IGKV3-11	68	250	98.8	2	-	hg38	intron-exon	89030503-90181159;89020503-90181159	GM12878;GM12878
IGK	28	593	97.7	2	-	IGKC	256	668	97.7	2	-	hg38	intron-exon	88850487-89120509;88850487-89110509	K562,NHEK;K562,NHEK
IGL	1	638	97.7	22	+	IGLV3-12	348	1035	97.7	22	+	hg38	intron-exon	22777510-22777510	HMEC
IGL	1	149	99.4	22	+	IGLC2	141	238	99	22	-	hg38	intron-exon	22907830-22907830;22897820-22907830;22897820-22897820	IMR90;IMR90;K562,NHEK
IGL	1	339	99.6	22	-	IGLC3	340	455	99.6	22	-	hg38	intron-exon	22907830-22907830;22897820-22907830;22897820-22897820	IMR90;IMR90;IMR90,K562,NHEK
IGL	1	246	100	22	-	IGLC3	243	340	100	22	+	hg38	intron-exon	22907830-22907830;22897820-22907830;22897820-22897820	IMR90;IMR90;IMR90,K562,NHEK
IGLC2	6	100	99	22	+	IGL	101	388	99	22	+	hg38	exon-intron	22907830-22907830;22897820-22907830;22897820-22897820	IMR90;IMR90;IMR90,K562,NHEK
IGLC2	3	103	98.9	22	+	IGL	104	352	98.9	22	+	hg38	exon-intron	22907830-22907830;22897820-22907830;22897820-22897820	IMR90;IMR90;IMR90,K562,NHEK
IGLC2	1	101	99.1	22	+	IGL	102	313	99.1	22	+	hg38	exon-intron	22907830-22907830;22897820-22907830;22897820-22897820	IMR90;IMR90;IMR90,K562,NHEK
IGLC2	8	199	98.9	22	+	IGL	200	364	98.9	22	+	hg38	exon-intron	22907830-22907830;22897820-22907830;22897820-22897820	IMR90;IMR90;IMR90,K562,NHEK
IGLC3	7	107	98.9	22	+	IGL	108	361	98.9	22	+	hg38	exon-intron	22907830-22907830;22897820-22907830;22897820-22897820	IMR90;IMR90;IMR90,K562,NHEK
IGLL5	7	356	98.3	22	+	IGL	357	417	98.3	22	+	hg38	exon-intron	22897820-22907830;22897820-22897820;22887820-22907830;22887820-22897820	IMR90;IMR90,K562,NHEK;GM12878,IMR90,K562,NHEK;GM12878,IMR90,K562,NHEK
IGLV2-23	1	172	96.4	22	+	IGLV2-18	173	252	96.4	22	+	hg38	exon-exon	22707515-22727511;22697515-22727511	IMR90;IMR90
IK	19	327	99.7	5	-	IK	300	433	100	5	+	hg38	exon-exon	140660415-140660415	K562
IL1B	50	109	98.4	2	-	IL1B	101	172	100	2	+	hg38	exon-exon	112832423-112832423;112822423-112832423;112822423-112822423	IMR90,K562,KBM-7;IMR90,K562,KBM-7;IMR90,K562,KBM-7
IL1R1	1	70	100	2	-	IL1R1	67	127	100	2	+	hg38	exon-exon	102173540-102173540	K562
IL1RN	6	89	97.6	2	-	IL1RN	84	491	98.3	2	+	hg38	exon-exon	113142423-113142423;113132423-113142423;113132423-113132423	K562;K562;K562
IL4I1	1	101	100	19	-	KCTD2	90	756	98.1	17	+	hg38	intron-exon	75033905-49926743	GM12878
IL6	16	79	100	7	+	IL6-AS1	75	138	100	7	-	hg38	exon-intron	22720381-22730381	K562
ILF3	1	126	96.8	19	-	ILF3	114	430	99.7	19	+	hg38	exon-exon	10689324-10689324;10679324-10689324	K562;K562
ILK	1	164	99	11	+	TAF10	165	500	99	11	+	hg38	intron-exon	6608770-6608770	K562
IMMP1L	2	62	100	11	-	ELP4	59	639	100	11	+	hg38	exon-exon	31508453-31518453	GM12878
IMP4	33	152	98.4	2	+	IMP4	144	391	100	2	-	hg38	exon-exon	130342427-130342427	GM12878
IMPDH2	7	123	97.5	3	+	IMPDH2	109	484	100	3	-	hg38	exon-exon	49022567-49022567	K562
ING1	1	56	100	13	+	ING1	52	210	98.8	13	-	hg38	exon-exon	110727653-110727653;110717653-110727653;110717653-110717653	K562;K562;K562
INPPL1	17	139	98.4	11	-	INPPL1	133	262	99.3	11	+	hg38	exon-exon	72238956-72238956;72228956-72238956;72228956-72228956	K562;K562;K562
IPO9	2	84	100	1	-	IPO9	77	216	100	1	+	hg38	exon-exon	201880872-201880872;201870872-201880872;201870872-201870872	GM12878;GM12878;GM12878
ITGA9	1	3243	100	3	+	ITGA9-AS1	2776	7860	100	3	+	hg38	exon-intron	37778509-37808509;37778509-37798509;37768509-37808509;37768509-37798509	GM12878,K562;GM12878,K562;GM12878,K562;GM12878,K562
ITGAL	1	412	100	16	-	PSMD8	410	497	96.6	19	+	hg38	exon-intron	30508679-38379360	K562
ITGAM	18	257	99.6	16	-	ITGAM	248	619	99.5	16	+	hg38	exon-exon	31278679-31328679;31278679-31318679;31268679-31328679;31268679-31318679	GM12878;GM12878;GM12878;GM12878
ITGAV	35	95	100	2	-	ITGAV	92	757	98.8	2	+	hg38	exon-exon	186675273-186675273;186685273-186685273	GM12878;hESC
ITGB1	7	111	100	10	+	ITGB1	105	300	99.5	10	-	hg38	exon-exon	32921072-32941072;32931072-32941072	KBM-7;GM12878,KBM-7
ITGB1	9	153	99.4	10	+	ITGB1	152	629	98.6	10	-	hg38	exon-exon	32921072-32941072;32931072-32941072	KBM-7;GM12878,KBM-7
ITGB5	20	79	100	3	+	ITGB5	77	809	99.2	3	-	hg38	exon-exon	124771153-124801153;124771153-124791153	KBM-7;KBM-7
ITGB8	11	215	99.1	7	+	ITGB8	204	510	98.7	7	-	hg38	exon-exon	20410377-20410377	GM12878
ITGB8	20	350	99.1	7	-	ITGB8	161	433	98.3	7	+	hg38	exon-exon	20340377-20410377	GM12878
ITM2B	1	97	100	13	-	ITM2B	91	841	100	13	+	hg38	exon-exon	48255864-48255864	GM12878
ITPKB	49	129	100	1	+	ITPKB	128	329	100	1	-	hg38	exon-exon	226632299-226632299	GM12878
ITPRID2	1	62	100	2	-	ITPRID2	55	211	100	2	+	hg38	exon-exon	181935273-181935273;181925273-181935273	K562;K562
IVD	1	86	98.9	15	-	IVD	81	197	100	15	+	hg38	exon-exon	40417801-40417801;40407799-40417801	GM12878;GM12878
IWS1	28	133	100	2	+	IWS1	131	411	100	2	-	hg38	exon-exon	127482424-127482424;127472424-127482424;127472424-127472424	KBM-7;KBM-7;KBM-7
JAM3	9	199	99	11	+	JAM3	195	286	100	11	-	hg38	exon-exon	134150105-134150105	IMR90,NHEK
JCHAIN	1	72	98.7	4	+	JCHAIN	64	151	100	4	-	hg38	exon-exon	70654283-70664283	HMEC
JMJD1C	8	61	96.3	10	-	JMJD1C	59	223	100	10	+	hg38	exon-exon	63210240-63210240;63200240-63210240	K562;K562
KANSL1	18	249	100	17	+	KANSL1	244	427	100	17	-	hg38	exon-intron	46032634-46042634;46032634-46032634	NHEK;NHEK
KANSL1	1	184	100	17	+	KANSL1	179	410	100	17	-	hg38	exon-exon	46032634-46042634;46032634-46032634	NHEK;NHEK
KANSL3	15	127	98.3	2	-	ITPKB	124	179	100	1	+	hg38	exon-exon	226632299-96594263	GM12878
KCNG1	5	287	99.7	20	+	PRNP	287	345	100	20	-	hg38	exon-exon	4699354-51013463	GM12878
KCNK6	1	91	97.9	19	-	KCNK6	72	258	97.4	19	+	hg38	exon-exon	38319360-38319360	IMR90-Dixon
KCNMA1	1	240	99.8	10	+	KCNMA1-AS1	122	431	99.8	10	+	hg38	exon-intron	76890242-76890242	GM12878
KCNMB1	1	118	97.5	5	-	KCNIP1	112	348	99.6	5	+	hg38	exon-intron	170382996-170382996;170372996-170382996	KBM-7;KBM-7
KCNQ1	26	127	99.1	11	-	KCNQ1	120	2821	100	11	+	hg38	exon-exon	2448770-2448770;2438770-2448770;2438770-2438770	GM12878;GM12878;GM12878
KCTD15	15	78	100	19	-	KCTD15	74	708	98.8	19	+	hg38	exon-exon	33809095-33809095	K562
KCTD2	8	89	100	17	+	KCTD2	78	213	98.6	17	-	hg38	exon-exon	75053905-75063905;75063905-75063905;75053905-75053905	GM12878;GM12878,K562;GM12878,K562
KDELR1	11	63	100	19	+	KDELR1	61	796	100	19	-	hg38	exon-exon	48376743-48396743	IMR90-Dixon
KDM1A	8	70	100	1	+	KDM1A	68	202	100	1	-	hg38	exon-exon	23073507-23083507;23073507-23073507;23063507-23083507;23063507-23073507	GM12878;GM12878;GM12878;GM12878
KDM1A	5	90	100	1	+	KDM1A	87	218	99.3	1	-	hg38	exon-exon	23083507-23083507;23073507-23083507;23073507-23073507	GM12878;GM12878;GM12878
KDM4B	4	130	100	19	-	GTF2F1	121	375	99.7	19	-	hg38	exon-exon	5149989-6379989	K562
KIF11	18	109	100	10	-	KIF11	105	596	99.8	10	+	hg38	exon-exon	92650243-92650243	GM12878
KLHDC3	37	237	100	6	+	KLHDC3	235	446	100	6	-	hg38	exon-exon	43012262-43012262	GM12878
KLHL28	1	500	99.4	14	-	SCFD1	494	628	98.6	14	+	hg38	exon-intron	30650794-44920797;30640794-44920797	GM12878;GM12878
KLK2	12	301	99.8	19	-	KLK3	302	367	99.8	19	-	hg38	intron-exon	50856744-50866744;50856744-50856744	K562;K562
KLK3	33	328	98.7	19	+	KLK3	324	407	98.9	19	-	hg38	exon-exon	50856744-50866744;50856744-50856744	K562;K562
KLK3	5	87	97.6	19	+	KLK3	83	377	98.3	19	-	hg38	exon-exon	50856744-50866744;50856744-50856744	K562;K562
KLRC4-KLRK1	1	974	100	12	-	KLRC4-KLRK1	975	1947	100	12	-	hg38	exon-exon	10387401-10397401	K562
KMT2A	40	884	99.9	11	+	KMT2A	880	947	100	11	-	hg38	exon-exon	118479285-118479285	IMR90
KMT2A	2	871	99.8	11	+	KMT2A	867	935	100	11	-	hg38	exon-exon	118479285-118479285	IMR90
KMT2A	2	393	99.8	11	+	KMT2A	384	453	100	11	-	hg38	exon-exon	118479285-118479285	IMR90
KPNB1	7	169	98.8	17	+	KPNB1	161	220	100	17	-	hg38	exon-exon	47682634-47682634	KBM-7
KPNB1	1	85	100	17	-	KPNB1	80	868	98.8	17	+	hg38	exon-exon	47682634-47682634;47672634-47682634	KBM-7;KBM-7
KRT86	1	82	98.8	12	-	KRT86	83	370	99.3	12	+	hg38	exon-exon	52306216-52306216	HUVEC
LAIR1	5	191	99.5	19	+	SNHG17	181	325	99.4	20	+	hg38	exon-intron	54358391-38431357	GM12878
LAMA3	6	179	100	18	+	LAMA3	172	612	99.1	18	-	hg38	exon-exon	23920036-23930036;23910036-23930036;23920036-23920036;23910036-23920036	K562;K562;GM12878,K562;GM12878,K562
LAMA3	11	185	100	18	+	LAMA3	178	601	99.6	18	-	hg38	exon-exon	23920036-23930036;23910036-23930036;23920036-23920036;23910036-23920036	K562;K562;GM12878,K562;GM12878,K562
LAMA3	1	63	100	18	-	LAMA3	56	161	99.1	18	+	hg38	exon-exon	23930036-23930036	K562
LEPR	1	56	100	1	+	LEPROT	57	484	100	1	+	hg38	intron-exon	65424317-65434317;65424317-65424317	GM12878;GM12878,KBM-7
LHCGR	1	900	98.1	2	-	STON1-GTF2A1L	820	2103	98.1	2	-	hg38	exon-intron	48632861-48752861	GM12878
LHX1-DT	2	91	100	17	-	DUSP14	91	775	97.6	17	+	hg38	exon-exon	36932700-37509898	GM12878
LINC00456	18	116	98	13	-	LINC00456	114	167	100	13	+	hg38	exon-intron	97187746-97187746;97177746-97177746	HAP1;IMR90,HUVEC,RPE1
LINC00893	113	302	100	X	-	LOC106050102	300	487	100	X	+	hg38	exon-intron	149498469-149538467;149488469-149538467;149498469-149528463;149488469-149528463	KBM-7;KBM-7;HMEC,KBM-7;HMEC,KBM-7
LINC01620	24	351	97.9	20	+	PAFAH2	349	546	98	1	+	hg38	exon-exon	25963509-44461360	GM12878
LINC01749	1	81	97.6	20	+	DNAJC5	80	414	99.7	20	+	hg38	exon-exon	63018648-63928647;63008648-63928647	KBM-7;KBM-7
LINC02762	1	196	100	11	+	KCNJ11	194	522	98.8	11	-	hg38	intron-exon	17378453-112299277;17378453-112289277	GM12878;GM12878
LMOD1	21	384	99.8	1	+	AL513217.1	377	434	100	1	+	hg38	exon-intron	201890872-201890872	GM12878
LMTK3	6	83	97.5	19	+	LMTK3	84	249	99.4	19	-	hg38	exon-exon	48476743-48476743	NHEK
LNPEP	1	222	100	5	+	LNPEP	219	275	100	5	-	hg38	exon-exon	97024296-97024296	RPE1
LOC100129917	2	206	100	4	+	PCGF3	196	400	97.6	4	+	hg38	intron-exon	766212-776212	KBM-7
LOC100130950	13	482	99.8	17	+	ARPP19	477	557	100	15	-	hg38	exon-exon	52547803-5206705	GM12878
LOC100131294	8	132	97.6	12	-	VSIR	128	532	99.3	10	-	hg38	exon-intron	71770243-55986216	GM12878
LOC100506497	1	246	99.9	7	+	CPVL	247	566	99.9	7	+	hg38	intron-exon	29000384-29030384;28990384-29030384	GM12878;GM12878
LOC101928143	1	296	99.9	14	-	NUMB	297	587	99.9	14	-	hg38	exon-exon	73363292-73463294;73353292-73463294	HUVEC;HUVEC
LOC101929057	1	67	100	6	+	MDN1	66	1421	100	6	-	hg38	intron-exon	89670281-89680281;89660281-89680281	HMEC;HMEC
LOC101929057	6	88	100	6	+	MDN1	72	663	100	6	-	hg38	intron-exon	89670281-89680281	HMEC
LOC101929089	21	198	100	11	-	KMT2A	196	362	99.5	11	+	hg38	intron-exon	118519285-118529285	RPE1
LOC102723582	28	135	100	3	+	KPNA1	116	276	99.4	3	-	hg38	intron-exon	122441153-122441153;122431153-122441153;122431153-122431153	GM12878;GM12878;GM12878
LOC105370792	1	140	96.8	15	+	EHD4	141	437	96.8	15	+	hg38	exon-exon	41907802-41907802	IMR90-Dixon,KBM-7
LOC105370795	1	76	98.7	15	+	TMEM87A	72	743	99.6	15	-	hg38	intron-exon	42207802-42207802	GM12878
LOC105370795	1	137	97.8	15	+	TMEM87A	128	288	100	15	-	hg38	intron-exon	42207802-42207802	GM12878
LOC105372273	12	138	97.7	19	+	DOCK6	131	480	99.2	19	+	hg38	intron-exon	11209324-11219324;11199324-11219324	HUVEC;HUVEC
LOC105372441	8	180	100	19	-	KLK15	107	428	100	19	-	hg38	intron-exon	50826744-50846744;50826744-50836744	IMR90;IMR90
LOC105374328	17	356	99.8	2	-	FAM228B	300	471	99.8	2	-	hg38	intron-exon	24167131-24167131;24157130-24167131	IMR90;IMR90
LOC105374328	11	350	99.4	2	-	FAM228B	294	439	99.4	2	-	hg38	intron-exon	24167131-24167131;24157130-24167131	IMR90;IMR90
LOC105375489	22	183	98.5	7	-	ARF5	184	469	98.5	7	-	hg38	exon-exon	127589946-127589946	GM12878,hESC
LOC105375489	7	169	99	7	-	ARF5	170	385	99	7	-	hg38	exon-exon	127589946-127589946	GM12878,hESC
LOC105376384	12	139	99.6	10	-	FBH1	126	229	99.6	10	-	hg38	exon-exon	5928037-5938037;5928037-5928037;5918037-5938037;5918037-5928037	GM12878;GM12878;GM12878;GM12878
LOC105376384	1	298	98.1	10	-	FBH1	167	406	98.1	10	-	hg38	exon-exon	5928037-5938037;5928037-5928037;5918037-5938037;5918037-5928037	GM12878;GM12878;GM12878;GM12878
LOC105376615	34	101	100	11	-	QSER1	101	679	98.3	11	+	hg38	intron-exon	32968454-32968454	HAP1
LOC105378316	4	346	99.4	10	-	TFAM	347	498	99.4	10	-	hg38	intron-exon	58390240-58510240;58400240-58510240	NHEK;NHEK,RPE1
LOC107984305	20	165	98.7	11	-	ILK	162	584	98.1	11	+	hg38	exon-exon	6608770-6608770	K562
LOC107984338	1	179	98.4	11	-	NEAT1	168	386	100	11	+	hg38	exon-exon	65432529-65432529;65422529-65432529	IMR90-Dixon;IMR90-Dixon
LOC112268006	9	177	100	7	-	TMEM248	178	496	100	7	-	hg38	exon-exon	66955013-66955013	K562
LOC112268196	25	206	100	17	+	CYTH1	193	585	99.8	17	-	hg38	exon-intron	78673918-78683918	NHEK
LOC648987	2	215	99.8	5	+	LOC153684	120	402	99.8	5	+	hg38	intron-exon	43049898-43049898;43039898-43049898	RPE1;RPE1
LPAR6	19	243	99.2	13	-	RTRAF	237	582	99.5	14	-	hg38	exon-exon	48405864-52003282	GM12878
LPXN	6	208	98.7	11	+	ZFP91-CNTF	209	730	98.7	11	+	hg38	exon-exon	58572527-58592527;58572527-58582527	KBM-7;KBM-7
LRTOMT	1	69	100	11	+	LAMTOR1	67	533	100	11	-	hg38	intron-exon	72088954-72088954	K562
LSM4	18	179	100	19	+	LSM4	174	329	99.4	19	-	hg38	exon-exon	18309190-18309190;18299190-18309190;18299190-18299190	GM12878;GM12878;GM12878
LYAR	72	235	100	4	+	LYAR	234	343	99.1	4	-	hg38	exon-exon	4278273-4288273	HAP1
LYAR	10	480	99.8	4	+	COL6A3	475	680	98.6	2	+	hg38	exon-exon	237371357-4278273;237361357-4278273	GM12878;GM12878
MAGI2-AS3	1	648	100	7	-	MAGI2	649	6975	100	7	-	hg38	intron-exon	78020683-79460684;78010683-79460684	GM12878;GM12878
MALAT1	2	320	99.7	11	+	MUC7	314	451	97.9	4	+	hg38	exon-exon	65492529-70484283	GM12878
MALAT1	1	117	99.2	11	+	DBN1	102	572	100	5	-	hg38	exon-exon	65502529-177462999	GM12878
MAN2A1	35	97	100	5	-	MAN2A1	91	686	99.2	5	+	hg38	exon-exon	109864299-109864299	GM12878
MAP3K20-AS1	9	261	96.3	2	-	MAP3K20	189	432	96.3	2	-	hg38	exon-exon	173195272-173215272;173185272-173215272	K562;K562
MAP7	1	67	100	6	+	MAP7	66	245	99.5	6	-	hg38	exon-exon	136418862-136548862;136408862-136548862	GM12878;GM12878
MAPKAPK5	1	197	99.5	12	-	MAPKAPK5	195	263	100	12	+	hg38	exon-exon	111892196-111892196	IMR90-Dixon
MAPKAPK5	19	377	99.5	12	-	MAPKAPK5	364	543	100	12	+	hg38	exon-exon	111892196-111892196	IMR90-Dixon
MARCKSL1	5	106	100	1	-	MARCKSL1	106	183	100	1	+	hg38	exon-exon	32344399-32344399	GM12878
MARK3	18	447	99.6	14	-	WARS1	446	588	100	14	+	hg38	exon-exon	100373663-103503663;100373663-103493663;100363663-103503663;100363663-103493663	GM12878;GM12878;GM12878;GM12878
MAST2	31	90	100	1	-	MAST2	81	311	99.2	1	+	hg38	exon-exon	46014328-46014328	K562
MAU2	18	613	100	19	-	MAU2	609	669	100	19	+	hg38	exon-exon	19349191-19349191	GM12878
MBD5	1	110	97.3	2	-	KIF5C	101	195	99	2	-	hg38	intron-exon	148382431-149023486;148372431-149023486	GM12878;GM12878
MBD5	1	196	99.5	2	-	KIF5C	187	281	100	2	-	hg38	intron-exon	148382431-149023486;148372431-149023486	GM12878;GM12878
MCAM	8	167	100	11	-	CBL	165	337	100	11	+	hg38	exon-exon	119299290-119309290;119299290-119299290	RPE1;NHEK,RPE1
MCM5	1	172	99.5	22	+	MCM5	166	233	100	22	-	hg38	exon-exon	35424007-35424007;35414007-35424007;35414007-35414007	GM12878;GM12878;GM12878
MCRS1	10	105	99	12	+	MCRS1	97	442	98.6	12	-	hg38	exon-exon	49556217-49566217	IMR90
MDM4	17	108	99	1	-	MDM4	109	261	100	1	+	hg38	exon-intron	204550872-204550872;204540872-204550872	GM12878;GM12878
MEA1	43	180	100	6	+	MEA1	175	407	100	6	-	hg38	exon-exon	43012262-43012262	GM12878
MEA1	1	78	98.9	6	+	KLHDC3	79	760	98.9	6	+	hg38	intron-exon	43012262-43012262	GM12878
MEA1	1	101	99.1	6	-	PPP2R5D	94	170	100	6	+	hg38	exon-exon	43012262-43012262	GM12878
MED4	2	405	99.5	13	+	MED4-AS1	406	503	99.5	13	+	hg38	exon-exon	48085864-48085864;48075864-48085864	IMR90-Dixon;IMR90-Dixon
MELTF	15	221	99.1	3	+	MELTF	204	734	99.9	3	-	hg38	intron-exon	197023129-197023129	IMR90-Dixon
MFHAS1	14	154	100	8	-	UBAP1	148	387	100	9	+	hg38	intron-exon	8802490-34240002	GM12878,IMR90
MFSD12	18	376	99.2	19	+	MFSD12	373	708	99.8	19	-	hg38	exon-exon	3550002-3550002	IMR90,IMR90-Dixon
MFSD2A	1	485	98.4	1	+	MFSD2A	480	536	98.3	1	-	hg38	exon-exon	39964328-39964328	GM12878
MICU1	42	94	100	10	+	MICU1	93	956	98.4	10	-	hg38	exon-exon	72360242-72360242;72370242-72370242	IMR90;K562
MIER1	1	751	99.9	1	+	WLS	750	3003	99.9	1	-	hg38	exon-exon	66964317-68134317;66964317-68124317;66954317-68134317	GM12878;GM12878;GM12878
MINK1	9	101	98.9	17	+	DAZAP2	96	462	100	12	+	hg38	exon-exon	51246216-4896705;51236216-4896705	GM12878;GM12878
MIR4713HG	9	183	99.5	15	+	CYP19A1	175	648	97.9	15	-	hg38	intron-exon	51237803-51257803;51237803-51247803;51227803-51257803;51227803-51247803	GM12878;GM12878;GM12878;GM12878
MMGT1	41	140	100	X	+	MMGT1	137	758	98.8	X	-	hg38	exon-exon	135957841-135957841	HAP1
MMP24-AS1-EDEM2	1	59	100	20	+	MMP24-AS1-EDEM2	54	204	100	20	-	hg38	exon-intron	35282197-35282197	KBM-7
MMP7	6	96	97.9	11	+	MMP7	93	158	97	11	-	hg38	exon-exon	102519269-102529269;102529269-102529269	hESC;KBM-7
MOB2	85	519	99.6	11	-	HSPB7	516	1263	99.6	1	-	hg38	exon-exon	16013505-1488770	KBM-7
MON1B	1	1522	100	16	+	SYCE1L	1523	5813	100	16	+	hg38	exon-intron	77186103-77206103	IMR90,RPE1
MORC4	8	156	100	X	-	MORC4	151	321	100	X	+	hg38	intron-exon	106946770-106976770;106946770-106966770;106936770-106976770;106936770-106966770	GM12878;GM12878;GM12878;GM12878
MOV10	1	65	98.5	1	+	RHOC	57	163	99.1	1	-	hg38	exon-exon	112697378-112697378	IMR90-Dixon,HUVEC
MOV10	9	212	100	1	-	MOV10	196	420	99.6	1	+	hg38	exon-exon	112687378-112697378;112697378-112697378	IMR90-Dixon;IMR90-Dixon,HUVEC
MPC2	18	156	100	1	+	MPC2	154	329	100	1	-	hg38	exon-exon	167920762-167920762	GM12878,IMR90-Dixon
MRPL12	14	200	99	17	-	MRPL12	189	277	97.8	17	+	hg38	exon-exon	81702970-81702970	GM12878
MRPL23	1	227	100	11	+	H19	223	575	98.9	11	-	hg38	intron-exon	1998770-1998770	IMR90-Dixon,HAP1
MRPS10	1	339	100	6	-	SEC13	335	725	98.5	3	-	hg38	exon-intron	10308316-42202262	GM12878
MRPS27	31	92	100	5	+	MRPS27	90	861	99.4	5	-	hg38	exon-exon	72224173-72224173	HAP1
MRPS9-AS1	1	257	99.1	2	-	MRPS9	88	325	99.1	2	-	hg38	intron-exon	105093542-105103542	HAP1
MRPS9-AS1	1	437	100	2	-	MRPS9	268	531	100	2	-	hg38	intron-exon	105093542-105103542	HAP1
MRPS9-AS1	1	448	99.5	2	-	MRPS9	279	558	99.5	2	-	hg38	intron-exon	105093542-105103542;105083542-105103542	HAP1;HAP1
MRPS9-AS1	1	448	99.9	2	-	MRPS9	279	516	99.9	2	-	hg38	intron-exon	105093542-105103542	HAP1
MRPS9-AS1	1	450	99.2	2	-	MRPS9	281	560	99.2	2	-	hg38	intron-exon	105093542-105103542;105083542-105103542	HAP1;HAP1
MRPS9-AS1	14	463	100	2	-	MRPS9	294	525	100	2	-	hg38	intron-exon	105093542-105103542	HAP1
MRPS9-AS1	1	460	99.9	2	-	MRPS9	291	557	99.9	2	-	hg38	intron-exon	105093542-105103542;105083542-105103542	HAP1;HAP1
MRPS9-AS1	1	461	99.9	2	-	MRPS9	292	523	99.9	2	-	hg38	intron-exon	105093542-105103542	HAP1
MSC	16	214	100	8	-	CA2	212	369	100	8	+	hg38	exon-exon	71837765-85467771	GM12878
MSH6	1	213	100	2	-	MSH6	210	313	100	2	+	hg38	exon-exon	47802861-47802861;47792861-47802861;47792861-47792861	RPE1;RPE1;RPE1
MSH6	4	84	100	2	-	MSH6	82	233	100	2	+	hg38	exon-exon	47802861-47802861;47792861-47802861;47792861-47792861	RPE1;RPE1;RPE1
MSH6	1	212	99.6	2	-	FBXO11	212	606	99.8	2	-	hg38	intron-exon	47802861-47802861	RPE1
MSN	1	1368	100	X	+	ALK	1369	1607	100	2	-	hg38	exon-exon	29227134-65730138	NHEK
MSN	3	381	100	X	+	ALK	382	437	100	2	-	hg38	intron-exon	29227134-65730138	NHEK
MTCH2	11	218	100	11	+	MTCH2	218	295	96.2	11	-	hg38	intron-exon	47628448-47628448;47618448-47628448	NHEK;NHEK
MTFR1L	1	330	99.7	1	-	MTFR1L	330	424	100	1	+	hg38	exon-exon	25823509-25833509;25823509-25823509	GM12878;GM12878
MTHFD1	25	122	98	14	+	MTHFD1	114	432	97.1	14	-	hg38	intron-exon	64453282-64453282;64443282-64453282;64443282-64443282	GM12878;GM12878;GM12878
MTMR9LP	1	925	100	1	-	EIF3I	924	1781	100	1	+	hg38	exon-exon	32224399-32234399	IMR90-Dixon
MTSS1	1	77	100	8	-	CYRIB	74	217	100	8	-	hg38	exon-exon	124707759-129877754	KBM-7
MTX2	2	248	100	2	+	LNPK	246	613	100	2	-	hg38	exon-exon	175945272-176275272;175935272-176275272	GM12878;GM12878
MTX2	18	194	99.5	2	-	MTX2	194	423	100	2	+	hg38	exon-exon	176335272-176335272	GM12878
MUC4	333	443	97.1	3	-	MAGEF1	440	786	99.5	3	-	hg38	exon-exon	184712212-195793129;184712212-195783129;184702212-195793129	GM12878;GM12878;GM12878
MUC4	333	443	97.1	3	-	MAGEF1	440	787	96.9	3	-	hg38	exon-exon	184712212-195793129;184712212-195783129;184702212-195793129	GM12878;GM12878;GM12878
MYH9	21	210	99	22	+	MYH9	205	292	100	22	-	hg38	exon-exon	36293954-36293954	K562
MYH9	1	145	100	22	+	MYH9	143	772	99.4	22	-	hg38	exon-exon	36293954-36293954	K562
MYHAS	6	324	99.1	17	+	MYH2	320	386	100	17	-	hg38	intron-exon	10496683-10526683;10486683-10526683	GM12878;GM12878
MYHAS	5	230	96.9	17	+	MYH2	226	409	97.9	17	-	hg38	intron-exon	10526683-10526683;10516683-10526683	GM12878;GM12878
NAA50	2	294	100	3	-	NAA50	291	402	100	3	+	hg38	exon-exon	113721153-113721153	GM12878
NAP1L1	1	168	100	12	+	NAP1L1	165	326	100	12	-	hg38	exon-exon	76056220-76056220;76046220-76056220;76046220-76046220	GM12878;GM12878;GM12878
NAP1L1	15	443	97.7	12	+	NAP1L1	444	609	99.4	12	-	hg38	exon-exon	76056220-76056220;76046220-76056220;76056220-76066220	GM12878;GM12878;K562
NASP	1	168	100	1	+	ATXN2L	166	549	100	16	+	hg38	exon-exon	45614328-28828679	HAP1
NCAPD3	24	98	97.6	11	-	JAM3	99	558	97.6	11	-	hg38	exon-exon	134150105-134150105	IMR90,NHEK
NCAPH	17	313	97.4	2	-	TMEM127	314	498	97.4	2	-	hg38	intron-exon	96254262-96354262;96244262-96354262	GM12878;GM12878
NCL	6	279	98	2	+	EEF1DP3	274	582	99.1	13	+	hg38	exon-intron	31955863-231455289	GM12878
NCL	13	194	99.5	2	+	NCL	188	375	96.8	2	-	hg38	exon-exon	231455289-231455289	HAP1
NCL	41	400	99.8	2	+	IGF2BP1	393	503	99.1	17	+	hg38	exon-exon	49052638-231455289	GM12878
NCL	1	78	98.8	2	-	NCL	70	235	100	2	+	hg38	exon-exon	231455289-231455289	HAP1
NCSTN	28	313	100	1	+	NCSTN	311	403	97.8	1	-	hg38	exon-exon	160350210-160350210	GM12878
NCSTN	11	92	100	1	-	NCSTN	88	178	100	1	+	hg38	exon-exon	160350210-160350210	GM12878
NDUFA10	1	170	98.3	2	-	NDUFA10	166	285	97.5	2	+	hg38	exon-exon	239960583-239970583	IMR90-Dixon
NDUFA10	1	170	100	2	-	NDUFA10	166	611	98.7	2	+	hg38	exon-exon	239960583-239970583	IMR90-Dixon
NDUFA11	1	222	100	19	+	NDUFA11	215	295	98.8	19	-	hg38	exon-exon	5899989-5899989;5889989-5899989;5889989-5889989	IMR90-Dixon;IMR90-Dixon;IMR90-Dixon
NDUFA11	1	164	98.2	19	+	NDUFA11	159	453	99.7	19	-	hg38	exon-exon	5899989-5899989;5889989-5899989	IMR90-Dixon;IMR90-Dixon
NDUFA7	1	213	100	19	-	PRKCSH	210	566	99.8	19	+	hg38	exon-exon	8315116-11449185;8315116-11439179	HAP1;HAP1
NDUFAF7	1	67	100	2	+	PRKD3	60	501	99.8	2	-	hg38	intron-exon	37242857-37252857	HAP1
NEAT1	1	100	99	11	+	SF1	98	741	100	11	-	hg38	exon-intron	64772528-65432529;64772528-65422529	HUVEC;HUVEC
NEAT1	7	134	100	11	+	NEAT1	129	219	100	11	-	hg38	exon-exon	65432529-65432529;65422529-65432529	IMR90-Dixon;IMR90-Dixon
NEAT1	13	159	99.4	11	+	NEAT1	154	336	96.2	11	-	hg38	exon-exon	65432529-65442529;65432529-65432529	IMR90-Dixon;IMR90-Dixon
NEAT1	25	106	100	11	-	NEAT1	103	322	100	11	+	hg38	exon-exon	65432529-65432529;65422529-65432529	IMR90-Dixon;IMR90-Dixon
NEAT1	1	211	100	11	-	NEAT1	207	293	100	11	+	hg38	exon-exon	65432529-65442529;65432529-65432529	IMR90-Dixon;IMR90-Dixon
NEAT1	19	104	98.9	11	-	NEAT1	100	161	100	11	+	hg38	exon-exon	65432529-65442529;65432529-65432529	IMR90-Dixon;IMR90-Dixon
NECAP2	28	119	100	1	-	NECAP2	118	858	97.3	1	+	hg38	exon-exon	16453505-16453505	GM12878
NECAP2	8	151	96.6	1	-	NECAP2	148	216	100	1	+	hg38	exon-exon	16453505-16453505	GM12878
NEFM	25	244	99.1	8	-	NEFM	242	409	96.9	8	+	hg38	exon-exon	24912487-24912487	K562
NEO1	8	125	99.2	15	+	NEO1	121	323	100	15	-	hg38	exon-exon	73127659-73227659;73117659-73227659	GM12878;GM12878
NF1	2	323	100	17	-	NF1	323	382	100	17	+	hg38	exon-exon	31372982-31372982	HMEC
NFATC1	6	117	99.2	18	-	NFATC1	115	726	98.2	18	+	hg38	exon-exon	79420000-79420000;79410000-79420000;79410000-79410000	IMR90;IMR90;IMR90
NFKB1	1	290	100	4	+	ITPKB	289	629	99.5	1	-	hg38	exon-exon	226632299-102578843	GM12878
NFRKB	8	180	100	11	+	NFRKB	176	511	100	11	-	hg38	exon-exon	129870105-129870105;129860105-129870105;129860105-129860105	HAP1;HAP1;HAP1
NHEJ1	1	168	97.7	2	-	CNPPD1	169	387	99.6	2	-	hg38	exon-exon	219085278-219175278;219075278-219175278	GM12878,HUVEC;GM12878,HUVEC
NID1	11	195	99.5	1	+	NID1	182	322	99.3	1	-	hg38	exon-exon	235986700-235996700;235986700-235986700	K562;K562
NKAPD1	1	112	99.2	11	+	TIMM8B	108	275	100	11	-	hg38	exon-exon	112079276-112079276	KBM-7
NLK	2	82	96.3	17	-	NLK	81	912	97.6	17	+	hg38	exon-exon	28182974-28182974	GM12878
NOL6	1	167	100	9	+	NOL6	163	485	99.7	9	-	hg38	exon-exon	33470002-33470002;33460002-33470002;33460002-33460002	GM12878;GM12878;GM12878
NOL6	1	167	100	9	+	NOL6	163	412	99.6	9	-	hg38	exon-exon	33470002-33470002;33460002-33470002;33460002-33460002	GM12878;GM12878;GM12878
NORAD	8	329	100	20	-	NORAD	323	421	96	20	+	hg38	exon-exon	36052078-36052078;36042078-36042078	IMR90-Dixon;IMR90-Dixon
NORAD	1	84	100	20	-	MAML3	81	654	98.6	4	-	hg38	exon-exon	36052078-139718846	GM12878
NPIPA2	56	388	96.6	16	+	NPIPA7	153	490	97.6	16	+	hg38	exon-exon	14766143-16396143	HAP1
NPRL2	41	142	100	3	+	NPRL2	138	479	100	3	-	hg38	exon-intron	50352569-50352569	GM12878
NR3C1	18	79	100	5	+	NR3C1	74	510	100	5	-	hg38	exon-exon	143280435-143280435	IMR90
NR3C1	17	335	100	5	+	NR3C1	331	431	100	5	-	hg38	exon-exon	143280435-143280435	IMR90
NR3C1	1	125	100	5	+	NR3C1	113	217	100	5	-	hg38	exon-exon	143290435-143290435;143280435-143290435;143280435-143280435	GM12878;IMR90;IMR90
NR3C1	28	132	100	5	+	NR3C1	120	244	100	5	-	hg38	exon-exon	143290435-143290435;143280435-143290435;143280435-143280435	GM12878;IMR90;IMR90
NR3C1	1	102	99.1	5	-	NR3C1	91	160	97.2	5	+	hg38	exon-exon	143280435-143280435	IMR90
NR3C1	1	76	100	5	-	NR3C1	70	284	99.6	5	+	hg38	exon-exon	143280435-143280435	IMR90
NR3C1	8	101	97.9	5	-	NR3C1	95	165	97.2	5	+	hg38	exon-exon	143280435-143280435	IMR90
NR3C2	17	122	100	4	+	NR3C2	119	593	99.8	4	-	hg38	exon-exon	148078849-148088849;148078849-148078849	HMEC;HMEC
NR4A3	1	405	99.1	9	+	NR4A3	383	488	100	9	-	hg38	intron-exon	99827718-99827718	IMR90
NUCB1-AS1	38	140	98.3	19	-	NUCB1	108	206	98.3	19	-	hg38	intron-exon	48906743-48916743;48906743-48906743	GM12878;GM12878
NUCB2	14	71	100	11	-	NUCB2	67	631	99.9	11	+	hg38	exon-exon	17318453-17318453;17308453-17318453;17308453-17308453	GM12878;GM12878;GM12878
NUCB2	16	353	100	11	-	NUCB2	350	417	100	11	+	hg38	exon-exon	17318453-17318453;17308453-17318453;17308453-17308453	GM12878;GM12878;GM12878
NUDT22	3	85	100	11	-	NUDT22	86	220	99.3	11	+	hg38	exon-exon	64232528-64232528	K562,RPE1
NUDT22	1	120	98.1	11	-	TRPT1	121	778	98.1	11	-	hg38	exon-exon	64232528-64232528	RPE1
OAS1	30	189	99.4	12	-	OAS1	188	262	97.3	12	+	hg38	exon-exon	112922195-112922195;112912195-112922195	GM12878;GM12878
OAZ1	4	228	100	19	+	FKBP8	226	545	100	19	-	hg38	exon-exon	2270001-18539190;2260001-18539190	GM12878;GM12878
ODC1	3	69	100	2	+	ODC1	66	666	99.9	2	-	hg38	exon-exon	10439874-10439874	K562
OGA	1	61	100	10	+	OGA	54	140	98.9	10	-	hg38	exon-exon	101810243-101810243;101800243-101810243	K562;K562
OLFM1	14	194	100	9	-	OLFM1	193	618	100	9	+	hg38	exon-exon	135128154-135128154;135118154-135128154	HAP1;HAP1
OLFM3	10	104	99.6	1	+	DNAJA1P5	105	1791	99.6	1	+	hg38	intron-exon	101874444-101884444;101864444-101884444	KBM-7;KBM-7
OPTN	16	488	100	10	-	OPTN	483	556	100	10	+	hg38	intron-exon	13128000-13138000;13138000-13138000	HAP1;K562
ORC2	1	245	97.2	2	+	ORC2	240	413	98.9	2	-	hg38	exon-exon	200945277-200945277;200935277-200945277;200935277-200935277	GM12878;GM12878;GM12878
ORC2	1	245	100	2	+	ORC2	240	397	96.2	2	-	hg38	exon-exon	200945277-200945277;200935277-200945277;200935277-200935277	GM12878;GM12878;GM12878
ORC4	1	377	100	2	-	ACVR2A	378	637	100	2	-	hg38	exon-exon	147932431-147932431;147922431-147922431	GM12878;IMR90-Dixon
OSBPL8	8	224	99.6	12	-	ZMYM4	218	378	99.4	1	-	hg38	exon-intron	35364399-76406220	K562
OSBPL9	1	222	100	1	+	NRDC	223	520	100	1	+	hg38	intron-exon	51784328-51794328	IMR90
OTX1	1	97	100	2	-	OTX1	95	188	100	2	+	hg38	exon-exon	63052865-63052865	GM12878
PACS2	5	219	99.6	14	+	MAP3K12	216	355	98.6	12	-	hg38	exon-intron	53496216-105383663	GM12878
PAFAH1B2	1	108	100	11	+	FOXR1	106	748	100	11	+	hg38	exon-exon	117159284-118969290;117149284-118969290	GM12878;GM12878
PAN3	24	146	100	13	+	RAPGEF5	139	224	97.7	7	-	hg38	intron-exon	28215863-22110382	K562
PAPPA-AS1	9	260	98.8	9	-	PAPPA	241	445	100	9	+	hg38	exon-exon	116397721-116397721	GM12878
PCDHB13	6	93	96.2	5	+	PCDHB13	94	390	99.4	5	-	hg38	exon-exon	141220428-141220428;141210428-141220428;141210428-141210428	KBM-7;KBM-7;KBM-7
PDE4A	1	77	100	19	-	GPR108	73	290	99.1	19	+	hg38	exon-intron	6729989-10469324	HAP1
PDE6D	1	597	99	2	-	PDE6D	592	832	98.8	2	+	hg38	exon-exon	231735290-231775290;231725290-231775290	GM12878;GM12878
PDIA6	148	236	100	2	+	PDIA6	234	386	99.4	2	-	hg38	exon-exon	10779874-10779874;10779874-10789874	hESC;RPE1
PDZRN3	11	119	99.1	3	+	PDZRN3	116	386	99.7	3	-	hg38	exon-exon	73390849-73440849;73390849-73430849	GM12878;GM12878
PFKFB2	19	217	99.5	1	-	PFKFB2	211	424	98.6	1	+	hg38	exon-exon	207066655-207076655	KBM-7
PGRMC1	9	256	99.2	X	-	PGRMC1	254	322	98.6	X	+	hg38	exon-exon	119246037-119246037	hESC
PHF12	5	86	97.6	17	+	PHF12	83	174	99	17	-	hg38	exon-exon	28912982-28922982	HAP1
PHF14	11	201	100	7	-	CACNA2D1	200	402	100	7	+	hg38	exon-exon	11160373-82340684	KBM-7
PHF8	10	166	99.4	X	+	PHF8	161	552	99.3	X	-	hg38	exon-exon	53993567-53993567;53983567-54003567;53983567-53993567;53993567-54003567	GM12878;GM12878;GM12878;GM12878,KBM-7
PIAS2	9	80	98.7	18	-	PIAS2	73	245	100	18	+	hg38	exon-exon	46830037-46830037;46820037-46830037	HUVEC;HUVEC
PIGG	1	76	97.4	4	-	PIGG	73	199	97.6	4	+	hg38	exon-exon	536211-536211;526211-536211;526211-526211	hESC;hESC;hESC
PIGG	16	170	100	4	-	PIGG	160	407	99.6	4	+	hg38	exon-exon	536211-536211	hESC
PIM2	1	220	99.1	X	+	PIM2	215	295	100	X	-	hg38	exon-intron	48912723-48912723	K562
PINK1-AS	1	347	99.8	1	+	DDOST	348	456	99.8	1	+	hg38	intron-exon	20653507-20653507;20643507-20653507	hESC;hESC
PISD	1	176	98.9	22	-	PISD	174	278	100	22	+	hg38	exon-exon	31614014-31624014;31614014-31614014	GM12878;GM12878
PLAAT1	1	95	99.9	3	+	ATP13A5-AS1	96	573	99.9	3	+	hg38	exon-exon	193232211-193322211;193242211-193312211;193232211-193312211	K562;RPE1;RPE1
PLEKHA6	25	125	97	1	+	PLEKHA6	113	814	96.9	1	-	hg38	exon-exon	204220872-204230872;204220872-204220872	HUVEC;HAP1
PLEKHA6	11	313	98.7	1	+	PLEKHA6	312	553	99.6	1	-	hg38	exon-exon	204250872-204270872	HAP1
PLEKHD1	1	556	100	14	+	SLC39A9	554	691	100	14	+	hg38	exon-exon	69463283-69493283;69453283-69493283	K562;GM12878,K562
PLEKHG2	1	115	100	19	-	PLEKHG2	111	506	99.8	19	+	hg38	exon-exon	39419360-39419360	GM12878
PNMA1	2	63	100	14	+	PNMA1	59	2520	99.9	14	-	hg38	exon-exon	73703297-73723297	HMEC
PNO1	1	423	99.1	2	-	ITPKB	420	506	100	1	+	hg38	exon-intron	226672299-68172868	GM12878
POLR3H	1	176	99.1	22	-	ACO2	59	328	99.1	22	-	hg38	exon-exon	41523996-41533996	KBM-7
POLR3H	1	242	98.9	22	-	ACO2	51	523	98.9	22	-	hg38	exon-exon	41523996-41533996	KBM-7
PORCN	10	111	100	X	-	PORCN	105	1621	99.9	X	+	hg38	exon-exon	48511612-48511612	GM12878
PPIG	1	175	97.2	2	+	PPIG	167	278	98.3	2	-	hg38	exon-exon	169633490-169633490	GM12878
PPP1R12A	5	177	100	12	-	PPP1R12A	172	308	100	12	+	hg38	exon-exon	79776220-79786220;79766220-79786220	IMR90;IMR90,NHEK
PPP2R2A	5	89	97.7	8	+	PPP2R2A	82	187	100	8	-	hg38	exon-exon	26362484-26362484	KBM-7
PPP2R2A	1	94	99	8	-	PPP2R2A	86	844	99.9	8	+	hg38	exon-exon	26362484-26362484	KBM-7
PPP2R5D	1	464	99.5	6	+	MEA1	465	554	99.5	6	+	hg38	intron-exon	43012262-43012262	GM12878
PPP4C	29	316	99.7	16	+	PPP4C	314	384	98.6	16	-	hg38	exon-exon	30078679-30078679	hESC
PQBP1	24	92	98.6	X	-	PQBP1	90	194	100	X	+	hg38	exon-exon	48902723-48902723;48912723-48912723	hESC;K562
PRB2	1	518	100	12	-	C1S	503	2671	100	12	+	hg38	exon-exon	7062696-11387066	KBM-7
PRDM4	1	502	100	12	+	LOC101929162	503	555	100	12	+	hg38	exon-exon	107736223-107746223;107726223-107746223	IMR90,RPE1;IMR90,RPE1
PRDM4	6	375	98.4	12	+	LOC101929162	338	508	98.4	12	+	hg38	exon-exon	107746223-107746223;107736223-107746223	IMR90,RPE1;IMR90,RPE1
PRG4	1	51	98.7	1	+	TPR	52	304	98.7	1	+	hg38	exon-exon	186310868-186320868	GM12878
PRKDC	8	123	100	8	+	PRKDC	120	475	99.5	8	-	hg38	exon-exon	47857439-47867439;47857439-47857439;47847439-47867439;47847439-47857439	GM12878;GM12878;GM12878;GM12878
PRNP	18	377	99.8	20	-	PRNP	370	584	100	20	+	hg38	exon-exon	4709354-4709354;4699354-4709354	HAP1;HAP1
PRNP	18	145	100	20	-	PRNP	143	201	100	20	+	hg38	exon-exon	4709354-4709354;4699354-4709354	HAP1;HAP1
PRPF4B	15	162	98	6	+	SEC63	155	320	97.6	6	-	hg38	exon-exon	4059766-107878796;4059766-107868796	GM12878;GM12878
PRRC1	75	134	100	5	-	PRRC1	133	459	100	5	+	hg38	exon-exon	127554308-127554308;127544308-127554308;127544308-127544308	GM12878;GM12878;GM12878
PRSS12	18	75	100	4	+	PRSS12	73	254	100	4	-	hg38	exon-exon	118288845-118288845	GM12878
PRSS23	5	86	97.6	11	-	PRSS23	83	184	99.1	11	+	hg38	exon-exon	86808958-86808958	IMR90-Dixon
PSAP	16	183	100	10	+	HLA-DPA1	180	539	97.8	6	+	hg38	exon-exon	71810243-33072223	GM12878
PSMB7	13	365	98.3	9	+	PSMB7	358	517	98.1	9	-	hg38	exon-exon	124407721-124407721	IMR90
PSTPIP2	1	410	96.9	18	-	EPG5	411	551	96.9	18	-	hg38	exon-intron	45950034-46070034;45940034-46070034	IMR90;IMR90
PSTPIP2	1	423	97.4	18	-	EPG5	424	565	97.4	18	-	hg38	exon-intron	45950034-46070034;45940034-46070034	IMR90;IMR90
PSTPIP2	1	432	97.2	18	-	EPG5	433	574	97.2	18	-	hg38	exon-intron	45950034-46070034;45940034-46070034	IMR90;IMR90
PTDSS1	5	132	100	8	-	PTDSS1	130	357	99.6	8	+	hg38	exon-exon	96337772-96337772;96327772-96337772;96327772-96327772	GM12878;GM12878;GM12878
PTK7	1	2733	100	6	+	MRPL14	2730	2946	99.6	6	-	hg38	intron-exon	43152262-44112263;43142262-44112263	GM12878;GM12878
PTPRA	1	143	100	20	-	LAMA5	140	496	100	20	-	hg38	intron-exon	3009354-62314944;2999354-62314944	GM12878;GM12878
PUF60	17	69	100	8	+	PUF60	68	642	100	8	-	hg38	exon-exon	143817830-143817830	hESC
PUM1	56	141	100	1	-	IGL	138	329	99	22	+	hg38	exon-intron	22907830-22907830;22897820-22907830;22897820-22897820	IMR90;IMR90;IMR90,K562,NHEK
PUM3	1	87	100	9	-	PUM3	80	504	99.8	9	+	hg38	exon-intron	2820000-2820000;2810000-2820000	RPE1;RPE1
PVT1	1	188	100	8	+	LINC00824	189	902	98.9	8	-	hg38	exon-exon	127797754-128427754;127787754-128427754	KBM-7;KBM-7
PVT1	1	184	100	8	+	LINC00824	178	916	98	8	-	hg38	exon-exon	127797754-128427754;127787754-128427754	KBM-7;KBM-7
PVT1	1	179	100	8	+	LINC00824	173	872	98.6	8	-	hg38	exon-exon	127797754-128427754;127787754-128427754	KBM-7;KBM-7
PVT1	1	173	100	8	+	LINC00824	167	866	98.9	8	-	hg38	exon-exon	127797754-128427754;127787754-128427754	KBM-7;KBM-7
PVT1	1	132	100	8	+	LINC00824	129	204	100	8	-	hg38	exon-exon	127997754-128437754;127987754-128437754	KBM-7;KBM-7
PXDN	25	180	99.4	2	+	PXDN	172	442	99.3	2	-	hg38	exon-exon	1626228-1626228;1626228-1636228	GM12878;GM12878,IMR90
QKI	1	56	100	6	-	QKI	51	688	99.7	6	+	hg38	exon-exon	163578968-163578968;163568968-163578968;163568968-163568968	GM12878;GM12878;GM12878
R3HDM1	6	132	99.3	2	-	R3HDM1	129	263	99.3	2	+	hg38	exon-exon	135652430-135682430;135652430-135672430;135642430-135682430;135642430-135672430	GM12878;GM12878;GM12878;GM12878
RAB11FIP2	22	170	99.4	10	+	RAB11FIP2	165	330	98.2	10	-	hg38	exon-exon	118010489-118010489	K562
RAB18	21	408	99.3	10	-	RAB18	403	669	100	10	+	hg38	exon-exon	27541071-27541071;27531071-27541071;27531071-27531071	GM12878;GM12878;GM12878
RAB22A	1	966	99.4	20	+	RAB22A	967	2140	99.6	20	-	hg38	exon-exon	58354944-58354944	IMR90
RAB31	1	346	100	18	-	RAB31	345	473	100	18	+	hg38	exon-exon	9780003-9860003;9770003-9860003	GM12878;GM12878
RAB31	19	126	99.1	18	-	RAB31	123	299	100	18	+	hg38	exon-exon	9860003-9860003	K562
RAB31	21	95	98.7	18	-	RAB31	86	389	97.7	18	+	hg38	exon-exon	9860003-9860003	K562
RAB8A	1	544	100	19	+	HSH2D	545	2567	100	19	+	hg38	exon-intron	16139190-16139190	GM12878
RABEP1	2	100	100	17	-	RABEP1	94	255	99.4	17	+	hg38	exon-exon	5346705-5356705;5346705-5346705;5356705-5356705	K562;RPE1;K562,RPE1
RALYL	18	75	96.6	8	-	RALYL	70	393	99.7	8	+	hg38	exon-exon	84917765-84917765	GM12878
RANBP9	52	123	96.3	6	+	MCUR1	124	405	96.3	6	+	hg38	intron-exon	13709768-13789768;13699768-13789768	K562;K562
RASA2	18	127	99.1	3	+	RASA2	122	196	98.7	3	-	hg38	exon-exon	141571158-141571158;141561158-141571158	NHEK;NHEK
RASSF5	18	290	99.7	1	+	EIF2D	288	657	97.3	1	-	hg38	exon-intron	206586668-206596651	GM12878
RBM4	16	218	100	11	-	RBM4	217	471	97.3	11	+	hg38	exon-exon	66642529-66642529	IMR90
RBM4	2	263	100	11	-	RBM4	262	465	98.6	11	+	hg38	exon-exon	66642529-66642529	IMR90
RBPJ	1	381	100	4	-	RBPJ	378	472	100	4	+	hg38	exon-exon	26428378-26428378;26438378-26438378;26428378-26438378	IMR90;NHEK;NHEK
RBSN	1	259	100	3	-	TLCD5	256	609	99.5	11	+	hg38	exon-exon	120329291-15068493	GM12878
REG4	1	85	98.9	1	+	REG4	79	1173	99.9	1	-	hg38	exon-exon	119797377-119797377;119787377-119797377;119787377-119787377	GM12878;GM12878;GM12878
RERE	1	344	99.8	1	-	IRAG2	328	460	99.3	12	+	hg38	exon-intron	8359940-25087066	IMR90
RFX3	11	150	100	9	+	RFX3	147	469	100	9	-	hg38	exon-exon	3220000-3220000	HMEC
RFX7	1	62	100	15	+	RFX7	54	686	98.9	15	-	hg38	exon-exon	56097802-56097802	GM12878
RILPL2	19	163	96.6	12	+	RILPL2	151	243	100	12	-	hg38	exon-exon	123425453-123425453;123415453-123425453;123415453-123415453	GM12878;GM12878;GM12878
RIOK3	1	112	99.2	18	+	RIOK3	109	225	99.2	18	-	hg38	exon-exon	23490036-23490036;23480036-23490036;23480036-23480036	K562;K562;K562
RMDN1	1	318	100	8	-	IMPA1	316	726	98.8	8	-	hg38	exon-exon	81667765-86507771	K562
RNASEK-C17orf49	18	576	99.7	17	-	PRPF8	573	727	100	17	+	hg38	exon-exon	1676706-7016681	K562
RNF11	11	266	97.7	1	-	RNF11	253	395	96.5	1	+	hg38	exon-exon	51264328-51264328	HMEC
RNF126	12	148	99.3	19	-	TSPAN4	148	462	99.7	11	+	hg38	exon-exon	860000-660000	GM12878
RNF40	1	221	98.7	16	+	TUFM	220	833	98.4	16	-	hg38	exon-exon	28838679-30768679	IMR90
RNF40	1	78	98.8	16	+	TTLL1	71	229	97.6	22	+	hg38	exon-intron	30768679-43053994;30768679-43043994	GM12878;GM12878
RPL10	1	114	100	X	+	RPL10	110	186	100	X	-	hg38	exon-exon	154401659-154401659	IMR90-Dixon
RPL11	14	96	100	1	-	EPHX1	97	687	98.5	1	+	hg38	intron-exon	23693510-225842299	K562
RPL36A	1	71	99.6	X	+	RPL36A-HNRNPH2	72	434	99.6	X	+	hg38	exon-exon	101395012-101395012	GM12878
RPL39P12	121	206	99.7	1	+	ISG15	207	658	99.7	1	+	hg38	intron-exon	1014620-1014620	K562
RPL6	39	400	100	12	+	RPL6	395	495	100	12	-	hg38	exon-exon	112402196-112412196	IMR90-Dixon
RPLP0	8	104	100	12	-	RPLP0	98	263	96.9	12	+	hg38	exon-exon	120192197-120192197	IMR90
RPLP2	1	80	100	11	-	RPLP2	78	165	100	11	+	hg38	exon-exon	810000-810000	GM12878
RPN1	9	79	100	3	+	RPN1	73	480	97.3	3	-	hg38	exon-exon	128621157-128621157;128611157-128621157;128611157-128611157	GM12878;GM12878;GM12878
RPN2	1	104	100	20	+	MED15	97	666	99.9	22	+	hg38	exon-exon	37211597-20515713;37201597-20505713	GM12878;GM12878
RPS6KA5	1	274	100	14	-	DDX24	273	802	97.4	14	-	hg38	exon-exon	91063656-94053654	RPE1
RPS6KA5	1	274	100	14	-	DDX24	273	797	99.3	14	-	hg38	exon-exon	91063656-94053654	RPE1
RPS8P8	1	56	98.3	5	-	RPS8P8	52	111	98.4	5	+	hg38	exon-exon	33169894-33169894;33159894-33169894;33159894-33159894	IMR90;IMR90;IMR90
RPTOR	8	119	100	17	-	RPTOR	115	406	100	17	+	hg38	exon-exon	80966200-80966200;80956200-80966200	GM12878;GM12878
RPUSD4	22	146	98.4	11	-	RPUSD4	140	247	100	11	+	hg38	exon-exon	126210105-126210105;126200105-126210105;126200105-126200105	GM12878;GM12878;GM12878
RSRC2	14	75	96.8	12	+	RSRC2	67	193	97.7	12	-	hg38	exon-exon	122515453-122515453;122505453-122515453	K562;K562
RTCB	1	150	98	22	-	RTCB	145	250	100	22	+	hg38	exon-exon	32394013-32404013	GM12878
RTEL1-TNFRSF6B	7	92	100	20	-	RTEL1-TNFRSF6B	85	551	99.6	20	+	hg38	exon-exon	63698647-63698647;63688647-63698647	GM12878;GM12878,KBM-7
RTN4IP1	1	339	99.7	6	-	CRYBG1	289	554	99.7	6	-	hg38	intron-exon	106562125-106572125	KBM-7
RUNX3	7	261	100	1	-	RUNX3	250	314	100	1	+	hg38	exon-exon	24903509-24903509;24893509-24913509	IMR90-Dixon;IMR90-Dixon
S100A13	7	165	99.4	1	+	S100A13	151	359	100	1	-	hg38	exon-exon	153627524-153627524	HUVEC
S100A8	18	191	100	1	+	S100A8	181	367	100	1	-	hg38	exon-exon	153387524-153397524;153387524-153387524	NHEK;NHEK
S100A8	18	191	100	1	+	S100A8	181	346	100	1	-	hg38	exon-exon	153387524-153397524;153387524-153387524	NHEK;NHEK
SAG	2	259	99.3	2	+	SAG	254	471	97.7	2	-	hg38	exon-intron	233341354-233341354;233331354-233341354	HMEC;HMEC
SAMD9	9	266	98.9	7	+	TET2	260	345	100	4	+	hg38	exon-exon	105278843-93100687	GM12878
SAR1A	1	157	100	10	+	NDC1	156	390	99.6	1	+	hg38	exon-exon	53804327-70150244;53794327-70160244	GM12878;GM12878
SAT1	9	102	99	X	+	SAT1	98	273	100	X	-	hg38	exon-exon	23791883-23791883;23781883-23791883	NHEK;NHEK
SAT1	1	111	100	X	-	SAT1	109	341	98.8	X	+	hg38	exon-exon	23791883-23791883;23781883-23791883	NHEK;NHEK
SAT1	8	171	96.3	X	-	SAT1	165	267	99.1	X	+	hg38	exon-exon	23791883-23791883;23781883-23791883	NHEK;NHEK
SAT1	1	232	100	X	-	SAT1	230	304	100	X	+	hg38	exon-exon	23791883-23791883;23781883-23791883	NHEK;NHEK
SAT1	17	96	100	X	-	SAT1	92	253	100	X	+	hg38	exon-exon	23791883-23791883;23781883-23791883	NHEK;NHEK
SATB1	27	225	100	3	-	SATB1	225	437	98.2	3	+	hg38	exon-exon	18338508-18348508	IMR90-Dixon,NHEK
SCAF4	1	92	99	21	-	SCAF4	90	193	100	21	+	hg38	exon-exon	31687687-31697687;31687687-31687687	K562;K562
SCML2	2	91	100	X	+	SCML2	86	1420	100	X	-	hg38	exon-exon	18241880-18251880	GM12878
SCYL2	1	57	100	12	+	DEPDC4	54	111	100	12	-	hg38	exon-intron	100276222-100286222;100276222-100276222	IMR90;IMR90
SDAD1	19	583	100	4	+	SDAD1-AS1	537	640	100	4	+	hg38	exon-intron	75988847-75988847;75978847-75988847	HUVEC;HUVEC
SDC2	1	168	100	8	+	SDC2	165	302	97.9	8	-	hg38	exon-exon	96607772-96617772;96607772-96607772;96617772-96617772	KBM-7;KBM-7;RPE1
SDCBP	8	135	96.1	8	+	SDCBP	127	555	100	8	-	hg38	exon-exon	58557441-58557441;58567441-58567441;58557441-58567441	IMR90;NHEK;NHEK
SDHB	1	165	98.2	1	+	SDHB	160	372	99.6	1	-	hg38	exon-exon	17013505-17033505	IMR90
SEC1P	1	447	100	19	+	FUT2	448	1152	100	19	+	hg38	exon-exon	48676743-48696743	KBM-7
SEC61A2	1	181	100	10	+	NUDT5	179	618	99.8	10	-	hg38	intron-exon	12168001-12168001;12158001-12168001;12158001-12158001	IMR90-Dixon;IMR90-Dixon;hESC
SEC61A2	45	282	99.6	10	+	NUDT5	283	652	99.6	10	+	hg38	exon-exon	12168001-12168001;12158001-12168001	IMR90-Dixon;IMR90-Dixon
SEC61A2	1	237	99.7	10	+	NUDT5	238	655	99.7	10	+	hg38	exon-exon	12168001-12168001;12158001-12168001	IMR90-Dixon;IMR90-Dixon
SEC61A2	34	130	100	10	-	SEC61A2	123	398	99.7	10	+	hg38	exon-exon	12168001-12168001;12158001-12168001;12158001-12158001	IMR90-Dixon;IMR90-Dixon;hESC
SEH1L	1	144	97.3	18	+	SEH1L	129	339	99.1	18	-	hg38	exon-exon	12980001-12980001	IMR90
SEPTIN2	21	73	100	2	-	SEPTIN2	72	712	100	2	+	hg38	exon-exon	241330585-241340585;241330585-241330585;241340585-241340585	GM12878;GM12878;GM12878,HMEC
SEPTIN2	29	139	100	2	-	SEPTIN2	138	311	100	2	+	hg38	exon-exon	241350585-241350585	GM12878,HMEC
SERINC1	15	124	99.1	6	+	SERINC1	122	449	99.1	6	-	hg38	exon-exon	122448855-122448855;122438855-122448855;122438855-122438855	GM12878;GM12878;GM12878
SERPINB6	18	74	100	6	+	SERPINB6	72	508	100	6	-	hg38	exon-exon	2939766-2939766	HMEC
SETD6	19	99	97.6	16	+	CNOT1	92	290	97.5	16	-	hg38	exon-exon	58526096-58526096;58516096-58526096	GM12878;GM12878
SETD6	28	504	100	16	+	CNOT1	505	625	100	16	+	hg38	exon-exon	58526096-58526096;58516096-58526096	GM12878;GM12878
SEZ6L2	1	61	100	16	+	SEZ6L2	54	149	100	16	-	hg38	exon-exon	29868679-29898679	hESC
SF3B2	5	196	100	11	-	SF3B2	188	252	100	11	+	hg38	exon-exon	66062529-66062529	GM12878
SF3B6	16	260	98.8	2	+	SF3B6	258	395	100	2	-	hg38	exon-exon	24077130-24077130	IMR90,RPE1
SFI1	1	433	100	22	+	PISD	434	505	100	22	+	hg38	intron-exon	31614014-31624014;31614014-31614014	GM12878;GM12878
SFN	1	138	99.3	1	-	SFN	130	437	100	1	+	hg38	exon-exon	26863509-26863509	GM12878
SFRP2	47	282	98.8	4	+	SFRP2	270	586	98.2	4	-	hg38	exon-exon	153778848-153778848	RPE1
SFSWAP	23	461	98.2	12	+	SFSWAP	456	551	98	12	-	hg38	exon-exon	131795455-131795455	IMR90,NHEK
SFTPC	15	126	100	8	-	SFTPC	124	206	100	8	+	hg38	exon-exon	22172487-22172487	K562
SH3BP4	8	294	99.7	2	+	SH3BP4	289	354	100	2	-	hg38	exon-exon	235051356-235051356	IMR90,HAP1
SHISA4	35	150	100	1	-	SHISA4	148	712	99.5	1	+	hg38	exon-exon	201890872-201890872;201880872-201890872	GM12878;GM12878
SIK3	12	150	98.6	11	+	SIK3	148	266	99.2	11	-	hg38	exon-exon	116869284-116869284	GM12878
SIPA1L1	1	420	99.8	14	-	SIPA1L1	412	3505	99.9	14	+	hg38	exon-exon	71733283-71743283;71723283-71743283	K562;K562
SLC1A3	24	295	99.7	5	-	SLC1A3	290	400	99.1	5	+	hg38	exon-exon	36679898-36689898;36689898-36689898;36679898-36679898	K562;GM12878,K562;GM12878,K562
SLC1A5	1	131	100	19	+	SLC1A5	127	250	97.4	19	-	hg38	exon-exon	46786743-46786743;46776743-46786743;46776743-46776743	GM12878,K562;GM12878,K562;GM12878,K562
SLC25A43	1	81	100	X	-	SLC25A43	78	387	99.4	X	+	hg38	exon-exon	119416037-119446037;119406037-119446037	GM12878;GM12878
SLC34A2	11	81	100	4	-	SLC34A2	76	433	99.5	4	+	hg38	exon-exon	25668378-25668378	NHEK
SLC35A2	1	192	99.4	X	-	PQBP1	193	291	99.4	X	-	hg38	exon-exon	48902723-48902723	hESC
SLC35B2	62	276	98.6	6	+	SLC35B2	274	356	100	6	-	hg38	exon-exon	44252263-44252263	IMR90
SLC39A13	7	93	100	11	-	SLC39A13	90	416	99.4	11	+	hg38	exon-exon	47408449-47408449	IMR90-Dixon
SLC45A3	1	641	100	1	-	ELK4	642	774	100	1	-	hg38	exon-exon	205630872-205670872	KBM-7
SLC45A3	1	109	100	1	-	ELK4	110	325	100	1	-	hg38	exon-exon	205630872-205670872	KBM-7
SLC45A3	1	511	100	1	-	ELK4	512	615	100	1	-	hg38	exon-exon	205630872-205670872	KBM-7
SLC4A4	1	91	100	4	-	SLC4A4	84	424	99.2	4	+	hg38	exon-exon	71554283-71554283;71544283-71554283	KBM-7;KBM-7
SLC4A7	24	106	100	3	+	SLC4A7	97	4396	100	3	-	hg38	exon-exon	27378509-27438509	IMR90-Dixon
SLC4A7	32	114	100	3	+	SLC4A7	105	3208	99.7	3	-	hg38	exon-exon	27378509-27438509	IMR90-Dixon
SLC66A1L	1	335	96.7	3	+	VEPH1	333	432	97	3	-	hg38	exon-exon	157472211-157552211;157462211-157552211	K562;K562
SMAD3	67	366	99.4	15	+	SMAD3	362	456	99	15	-	hg38	exon-exon	67187662-67187662	GM12878
SMAD4	20	123	100	18	-	SMAD4	115	502	100	18	+	hg38	exon-exon	51083630-51083630;51073630-51083630	GM12878;GM12878
SMARCC2	46	131	100	12	+	SMARCC2	125	921	98.2	12	-	hg38	exon-exon	56176216-56176216;56166216-56186216;56166216-56176216	K562;K562;K562
SMTN	12	225	99.1	22	-	SMTN	220	481	98.1	22	+	hg38	exon-exon	31104014-31104014;31094014-31104014;31094014-31094014	GM12878;GM12878;GM12878
SNAP23	39	47751	97.6	15	-	CAPN3	47752	47856	97.6	15	-	hg38	exon-intron	42397802-42527802;42387802-42527802	HAP1;HAP1
SNED1	20	238	97.8	2	+	MTERF4	233	288	100	2	-	hg38	exon-exon	241090585-241090585;241080585-241090585	RPE1;RPE1
SNED1	24	181	99.4	2	-	SNED1	168	255	96.6	2	+	hg38	intron-exon	241040583-241060583	NHEK
SNHG29	1	259	99.3	17	+	SEZ6	247	538	100	17	-	hg38	exon-exon	16446686-28982982	RPE1
SNRNP200	11	394	99.2	2	+	SNRNP200	392	483	96.7	2	-	hg38	exon-exon	96274262-96274262	GM12878
SNRNP200	6	286	99.3	2	-	RBM26	281	594	98.5	13	-	hg38	exon-exon	79325865-96274262	GM12878
SNW1	5	110	100	14	+	SNW1	110	804	98.5	14	-	hg38	exon-exon	77723657-77723657	GM12878
SNX21	2	235	100	20	+	ACOT8	236	477	100	20	+	hg38	exon-exon	45841361-45851361	GM12878,IMR90,IMR90-Dixon,HMEC,HUVEC,hESC,HAP1,K562,KBM-7,NHEK,RPE1
SNX3	1	133	97.8	6	-	SNX3	124	268	100	6	+	hg38	exon-exon	108208796-108218796	KBM-7
SON	22	230	100	21	-	CD44	217	320	97.2	11	+	hg38	exon-exon	35238453-33557694;35228453-33557694	GM12878;GM12878
SORD	6	87	100	15	+	SORD	86	261	99.5	15	-	hg38	exon-exon	45067802-45067802	GM12878
SPAG7	8	86	100	17	+	SPAG7	82	225	97.9	17	-	hg38	exon-exon	4966705-4966705	KBM-7
SPAG9	1	169	100	17	-	SPAG9	167	283	99.2	17	+	hg38	exon-exon	50952639-50962639	HAP1
SPHK1	1	141	100	17	-	PRPSAP1	142	549	100	17	-	hg38	intron-exon	76333919-76383919	GM12878
SPOCK2	1	108	99.1	10	+	SPOCK2	105	3259	100	10	-	hg38	exon-exon	72060242-72070242;72060242-72060242;72050242-72070242;72050242-72060242	GM12878;GM12878;GM12878;GM12878
SPOCK2	6	166	96.9	10	+	SPOCK2	161	284	100	10	-	hg38	exon-exon	72070242-72070242;72060242-72070242;72060242-72060242	GM12878;GM12878;GM12878
SPRY1	9	119	100	4	+	SPRY1	114	235	100	4	-	hg38	exon-exon	123408845-123408845;123398845-123408845;123398845-123398845	GM12878;GM12878;GM12878
SPRYD4	1	99	100	12	+	GLS2	100	10769	100	12	+	hg38	exon-intron	56466216-56476216;56476216-56476216	K562;KBM-7
SRI	1	634	99.4	7	+	SRI-AS1	593	730	99.4	7	+	hg38	exon-intron	88210685-88220685	RPE1
SRPK2	33	282	99.6	7	-	KMT2E	280	412	97	7	+	hg38	intron-exon	105119553-105119553	RPE1
SRRM1	1	65	100	1	-	SRRM1	65	324	98.1	1	+	hg38	exon-exon	24643509-24653509;24643509-24643509	GM12878;GM12878
SRRM1	13	94	98.8	1	-	SRRM1	88	390	99.4	1	+	hg38	exon-exon	24653509-24653509;24643509-24653509;24643509-24643509	GM12878;GM12878;GM12878
SRSF10	5	245	99.6	1	-	SRSF10	240	298	98.4	1	+	hg38	exon-exon	23973510-23973510;23963510-23973510;23963510-23963510	GM12878;GM12878;GM12878
ST3GAL1	19	139	100	8	+	ST3GAL1	136	253	100	8	-	hg38	exon-exon	133457757-133457757;133447757-133457757;133447757-133447757	RPE1;RPE1;RPE1
STMN1	19	253	99.6	1	+	STMN1	246	721	100	1	-	hg38	exon-exon	25903509-25903509;25893509-25903509	GM12878;GM12878,HAP1
STX4	37	326	99.7	16	-	KRT7	316	433	97.5	12	+	hg38	exon-intron	52236216-31038679	GM12878
SUGT1	14	87	97.3	13	-	SUGT1	77	514	99.8	13	+	hg38	exon-exon	52675865-52675865	KBM-7
SUGT1	14	87	97.3	13	-	SUGT1	77	518	99.8	13	+	hg38	exon-exon	52675865-52675865	KBM-7
SUMF1	1	71	100	3	+	SUMF1	70	292	99.6	3	-	hg38	exon-exon	4368316-4368316	GM12878
SUMF2	17	109	99	7	-	SUMF2	101	349	99.6	7	+	hg38	exon-exon	56072307-56072307	GM12878
SUPT7L	7	99	100	2	+	SUPT7L	97	220	100	2	-	hg38	exon-exon	27647133-27647133	GM12878
SYN3	9	157	98.7	22	-	TIMP3	147	544	100	22	+	hg38	intron-exon	32854013-32854013	KBM-7
SYNE2	2	186	99.5	14	-	SYNE2	176	391	99.6	14	+	hg38	exon-exon	64183282-64213282	KBM-7
TAF2	11	69	98.3	8	+	TAF2	67	497	99.8	8	-	hg38	exon-exon	119737760-119737760;119727760-119737760;119727760-119727760	GM12878;GM12878;GM12878
TALAM1	12	256	99.6	11	-	ANKRD44	250	639	98.5	2	+	hg38	exon-exon	65502529-197115276	KBM-7
TANK	5	133	100	2	+	IFIH1	132	578	99.8	2	-	hg38	exon-exon	161143489-162283490;161133489-162283490;161133489-162273490;161143489-162273490	GM12878;GM12878;GM12878;GM12878,HAP1,K562
TATDN2	1	50	98.2	3	+	GHRLOS	51	502	98.2	3	+	hg38	exon-intron	10278316-10288316;10278316-10278316	GM12878;GM12878
TATDN2	4	136	99.3	3	-	TATDN2	130	442	100	3	+	hg38	exon-exon	10278316-10288316;10278316-10278316	GM12878;GM12878
TBC1D14	14	187	100	4	+	TBC1D14	183	271	100	4	-	hg38	exon-exon	7008273-7018273;6998273-7018273	K562;K562
TBC1D31	1	122	100	8	+	ZNF704	119	227	100	8	-	hg38	exon-exon	80827765-123087760;80817765-123077760	GM12878;GM12878
TBC1D9	11	134	99.2	4	-	TBC1D9	128	190	100	4	+	hg38	exon-exon	140628846-140628846;140618846-140628846;140618846-140618846	KBM-7;KBM-7;KBM-7
TBL1X	1	123	100	X	-	TBL1X	117	417	99.7	X	+	hg38	exon-exon	9711960-9711960	HUVEC
TBL1X	18	97	100	X	-	TBL1X	91	571	99.4	X	+	hg38	exon-exon	9711960-9711960	HUVEC
TBRG1	1	370	96.8	11	-	TBRG1	361	440	100	11	+	hg38	exon-exon	124630104-124630104	GM12878
TBX2-AS1	33	323	98	17	+	LOC109280161	324	429	98	17	+	hg38	exon-intron	61392639-61392639	GM12878
TBX2-AS1	1	290	99.6	17	+	TBX2	291	639	99.6	17	+	hg38	exon-intron	61392639-61392639	GM12878
TBX3	15	310	100	12	+	KRT5	309	447	100	12	+	hg38	exon-exon	52526216-114672195;52526216-114662195;52516216-114672195	GM12878;GM12878;GM12878
TCEANC2	11	207	99.5	1	+	TCEANC2	203	381	100	1	-	hg38	exon-exon	54104327-54104327;54094327-54104327	K562;K562
TCTN2	11	119	100	12	+	WNK1	113	185	100	12	+	hg38	exon-exon	870834-123705453	KBM-7
TEAD4	1	78	100	12	-	TEAD4	70	704	99.3	12	+	hg38	intron-exon	3000834-3000834;2990834-3000834;2990834-2990834	K562;K562;K562
TEP1	1	125	99.2	14	-	TEP1	123	280	100	14	+	hg38	exon-exon	20391841-20391841	HUVEC
TGFB3	8	192	100	14	-	TGFB3	188	249	98.4	14	+	hg38	exon-exon	75963657-75963657;75953657-75973657;75953657-75963657	RPE1;RPE1;RPE1
TGOLN2	1	181	97.8	2	-	KYNU	174	316	100	2	-	hg38	exon-intron	85312877-142972431	GM12878
TGOLN2	13	150	99.3	2	-	TGOLN2	149	366	99.1	2	+	hg38	exon-exon	85312877-85322877;85312877-85312877	KBM-7;KBM-7
THBS1	1	82	98.8	15	+	THBS1	78	197	100	15	-	hg38	exon-exon	39597799-39597799;39587799-39597799;39587799-39587799	NHEK;NHEK;NHEK
THOC1	28	174	99.4	18	+	THOC1	172	382	99.6	18	-	hg38	exon-exon	220000-220000	KBM-7
TIMP2	23	78	100	17	+	TIMP2	77	467	100	17	-	hg38	exon-exon	78863918-78863918;78853918-78863918;78853918-78853918	NHEK;NHEK;NHEK
TIMP2	9	140	100	17	-	TIMP2	134	681	100	17	+	hg38	exon-exon	78853918-78853918	NHEK
TIMP2	1	88	100	17	-	TIMP2	81	254	99.5	17	+	hg38	exon-exon	78863918-78863918;78853918-78863918;78853918-78853918	NHEK;NHEK;NHEK
TINAGL1	31	130	96	1	+	TINAGL1	123	207	98.9	1	-	hg38	exon-exon	31584399-31594399;31584399-31584399;31574399-31594399;31574399-31584399	GM12878;GM12878;GM12878;GM12878
TLK1	8	85	100	2	+	TLK1	83	382	100	2	-	hg38	exon-exon	171063490-171163490;171053490-171163490	RPE1;RPE1
TLX1NB	1	263	99.6	10	+	TLX1	264	2877	99.6	10	+	hg38	exon-exon	101130243-101140243	KBM-7
TMBIM1	1	231	99.6	2	-	H19	229	537	99.4	11	-	hg38	exon-exon	1998770-218285277	GM12878
TMEM158	6	83	100	3	+	TMEM158	80	436	100	3	-	hg38	exon-exon	45228508-45228508;45218508-45228508;45218508-45218508	GM12878;GM12878;GM12878
TMEM245	1	171	97.7	9	-	GOLM1	166	413	99.6	9	-	hg38	exon-exon	86035085-109027720	GM12878
TMEM246-AS1	1	322	100	9	+	PGAP4	316	406	100	9	-	hg38	intron-exon	101477718-101477718;101467718-101477718	GM12878;GM12878
TMEM248	1	120	100	7	+	LOC112268006	116	200	100	7	-	hg38	exon-exon	66955013-66955013	K562
TMEM248	18	723	99.8	7	-	TMEM248	722	774	98.8	7	+	hg38	exon-exon	66955013-66955013;66945013-66955013	K562;K562
TNC	29	212	99.5	9	+	TNC	208	641	98.2	9	-	hg38	exon-exon	115067721-115067721;115057721-115057721	IMR90-Dixon;KBM-7
TNRC18	1	53	100	7	+	ADAP1	52	559	99.9	7	-	hg38	intron-exon	900363-5430369	RPE1
TP53I13	18	303	99.7	17	-	TP53I13	296	593	100	17	+	hg38	exon-exon	29572982-29572982	HUVEC
TPD52	1	877	99.9	8	-	MRPS28	878	1527	99.9	8	-	hg38	exon-exon	79927765-80087765	KBM-7
TPM1	1	220	98.7	15	-	TPM1	207	331	99.2	15	+	hg38	exon-exon	63067801-63067801	HUVEC
TPM1	12	233	99.6	15	-	TPM1	221	548	97.9	15	+	hg38	exon-exon	63067801-63067801	HUVEC
TPO	15	239	99.1	2	+	TPO	237	316	100	2	-	hg38	exon-exon	1476228-1486228	HUVEC
TPTEP2-CSNK1E	1	334	99.8	22	-	MOB3A	323	437	100	19	-	hg38	exon-exon	2080001-38313995	KBM-7
TRAJ47	112	168	100	14	+	TRA	169	246	100	14	+	hg38	exon-intron	22491012-22501017;22491012-22491012	HMEC;HMEC
TRAM1	33	107	100	8	+	TRAM1	103	195	100	8	-	hg38	exon-exon	70577765-70577765	KBM-7
TRAPPC8	1	166	100	18	+	TRAPPC8	162	238	98.7	18	-	hg38	exon-exon	31830037-31840037;31840037-31840037	IMR90;IMR90-Dixon
TRAV12-3	1	121	99.5	14	+	TRA	122	180	99.5	14	+	hg38	exon-intron	21961772-22491012;21961772-22481011;21971771-22491012;21971771-22481011	HMEC;HMEC;KBM-7;KBM-7
TRAV12-3	1	104	100	14	+	TRAJ54	105	159	100	14	+	hg38	exon-exon	21961772-22491012;21961772-22481011;21971771-22491012;21971771-22481011	HMEC;HMEC;KBM-7;KBM-7
TRAV12-3	1	105	100	14	+	TRAJ28	106	168	100	14	+	hg38	exon-exon	21971771-22521023;21971771-22511017	KBM-7;KBM-7
TRAV12-3	1	107	100	14	+	TRAJ17	107	165	100	14	+	hg38	exon-exon	21971771-22531050;21971771-22521023	KBM-7;KBM-7
TRAV12-3	1	107	100	14	+	TRAJ23	108	165	100	14	+	hg38	exon-exon	21971771-22521023;21971771-22511017	KBM-7;KBM-7
TRAV12-3	1	107	100	14	+	TRAJ28	108	171	100	14	+	hg38	exon-exon	21971771-22521023;21971771-22511017	KBM-7;KBM-7
TRAV12-3	1	107	100	14	+	TRAJ8	107	162	98.3	14	+	hg38	exon-exon	21971771-22541057;21971771-22531050	KBM-7;KBM-7
TRAV13-1	1	200	99.5	14	+	TRA	201	262	100	14	+	hg38	exon-intron	21861823-22531050	HUVEC
TRAV13-1	1	102	100	14	+	TRAJ9	100	154	100	14	+	hg38	exon-exon	21861823-22531050	HUVEC
TRAV17	1	219	100	14	+	TRAJ58	220	276	100	14	+	hg38	intron-exon	21991761-22481011	HAP1
TRAV20	1	180	100	14	+	TRAJ40	181	230	100	14	+	hg38	exon-exon	22031761-22491012	HMEC
TRAV20	5	211	99.7	14	+	TRAJ54	212	265	99.7	14	+	hg38	exon-exon	22031761-22491012	HMEC
TRAV20	1	119	99.5	14	+	TRAJ45	120	178	99.5	14	+	hg38	exon-exon	22031761-22491012	HMEC
TRAV21	1	230	100	14	+	TRAJ42	231	289	100	14	+	hg38	intron-exon	22051753-22491012	HMEC
TRAV24	1	182	100	14	+	TRAJ13	183	245	100	14	+	hg38	exon-exon	22101723-22541057;22101723-22531050	K562;K562
TRAV29DV5	2	167	99.1	14	+	TRAJ57	168	222	99.1	14	+	hg38	intron-exon	22162104-22481011;22162104-22471008	RPE1;RPE1
TRAV30	1	62	98.5	14	+	TRA	63	127	98.5	14	+	hg38	exon-intron	22162104-22381597	RPE1
TRAV36DV7	1	174	99.6	14	+	TRAJ52	175	230	99.6	14	+	hg38	exon-exon	22222104-22481011	IMR90
TRAV8-3	3	164	98.8	14	+	TRAJ6	164	220	96.8	14	+	hg38	exon-exon	21861823-22531050	HUVEC
TRUB2	11	316	97.4	9	+	TAPBP	194	725	99.7	6	+	hg38	intron-exon	33302223-128317721;33302223-128307721	GM12878;GM12878
TSKU	1	274	98.9	11	+	TSKU	268	353	100	11	-	hg38	exon-exon	76788956-76788956	RPE1
TSPAN8	17	359	98.6	12	+	TSPAN8	359	426	100	12	-	hg38	exon-exon	71136220-71146220;71136220-71136220;71126220-71146220;71126220-71136220	IMR90;IMR90;IMR90;IMR90
TTC19	1	297	100	17	+	NCOR1	295	883	98.7	17	-	hg38	exon-exon	16026686-16036686	HAP1
TTC3	1	100	97.5	21	+	VPS26C	101	319	97.5	21	+	hg38	intron-exon	37157698-37227699	GM12878
TTN	9	161	98.1	2	-	TTN	146	359	97.7	2	+	hg38	exon-exon	178755273-178755273;178745273-178755273	GM12878;GM12878
TTN-AS1	130	193	98.3	2	+	TTN	180	337	100	2	-	hg38	intron-exon	178595273-178595273	HUVEC
TTYH2	15	526	99.5	17	-	DCAF5	521	579	98.4	14	+	hg38	exon-intron	69073283-74253861	K562
TUBA1B	1	99	100	12	-	PFKM	98	502	100	12	+	hg38	exon-exon	48146217-49136217;48136217-49126217	KBM-7;KBM-7
TUBG1	1	244	98.8	17	-	TUBG1	236	378	100	17	+	hg38	exon-exon	42617982-42617982	IMR90
TUFT1	1	120	100	1	+	RNF115	119	445	100	1	-	hg38	exon-exon	145775073-151547524	K562
TUG1	7	327	99.4	22	+	TUG1	320	439	100	22	-	hg38	exon-exon	30974014-30974014	GM12878
UBAP1L	17	164	100	15	+	UBAP1L	161	831	100	15	-	hg38	exon-exon	65097662-65097662	GM12878
UBE2Z	1	58	100	17	-	UBE2Z	56	239	100	17	+	hg38	exon-exon	48922638-48922638	GM12878
UBE2Z	25	157	100	17	-	UBE2Z	149	694	99.9	17	+	hg38	exon-exon	48922638-48922638	GM12878
UBE4A	1	221	97.8	11	+	LOC100131626	215	276	100	11	-	hg38	exon-intron	118389285-118399285;118389285-118389285	K562;GM12878,K562
UHRF1BP1	58	111	100	6	-	UHRF1BP1	108	379	98.9	6	+	hg38	exon-exon	34852223-34852223;34862223-34862223;34852223-34862223	IMR90-Dixon;IMR90-Dixon,HUVEC;IMR90-Dixon,HUVEC
URI1	1	136	100	19	+	URI1	128	220	100	19	-	hg38	exon-exon	30009093-30009093	KBM-7
USF1	24	178	98.1	1	+	USF1	169	242	98.7	1	-	hg38	exon-exon	161040210-161040210	RPE1
USH1C	33	85	96	11	+	USH1C	83	519	99.4	11	-	hg38	exon-exon	17518453-17538453	NHEK
USP1	36	172	100	1	-	USP1	162	507	100	1	+	hg38	exon-exon	62444329-62444329	KBM-7
USP2-AS1	5	77	98.7	11	+	THY1	71	437	96.1	11	-	hg38	intron-exon	119419290-119419290	IMR90-Dixon
USP33	2	90	98.9	1	+	USP33	82	462	99.8	1	-	hg38	exon-intron	77714315-77714315	GM12878
VAV3-AS1	1	515	100	1	-	VAV3	516	5025	100	1	-	hg38	intron-exon	107577378-107967378;107567378-107967378;107577378-107957378;107567378-107957378	K562;K562;RPE1;RPE1
VBP1	21	156	100	X	-	VBP1	151	616	99.2	X	+	hg38	exon-exon	155241719-155241719;155231718-155231718	KBM-7;GM12878,KBM-7
VEGFB	8	87	98.8	11	+	VEGFB	84	401	98.8	11	-	hg38	exon-exon	64232528-64232528	K562,RPE1
VEZF1	14	205	100	17	+	VEZF1	204	402	100	17	-	hg38	exon-exon	57972639-57972639	HUVEC
VHL	1	12386	99.5	3	+	LOC107303340	439	14543	99.5	3	+	hg38	exon-intron	10158316-10158316;10148316-10148316	GM12878;GM12878
VPS35	8	89	97.6	16	+	VPS35	85	161	98.8	16	-	hg38	exon-exon	46666088-46666088	GM12878
VPS35	42	110	98.6	16	+	VPS35	104	802	98.3	16	-	hg38	exon-exon	46666088-46676088;46666088-46666088	GM12878;GM12878
VSIR	1	1955	99.9	10	-	ZNF664	1950	3145	97.1	12	+	hg38	intron-exon	71770243-124015453	GM12878
WBP1	1	203	96.5	2	-	MOGS	191	718	100	2	-	hg38	exon-intron	74462873-74462873	RPE1
WDR20	21	292	99.3	14	-	AKT3	278	348	98.6	1	+	hg38	exon-intron	243506698-102203663	NHEK
WDR6	1	286	99.9	3	+	DALRD3	287	538	99.9	3	+	hg38	exon-exon	49022567-49022567	K562
WDR78	13	102	100	1	+	WDR78	99	336	100	1	-	hg38	exon-exon	66814317-66814317;66804317-66814317	IMR90;IMR90
XPO6	85	156	98.7	16	+	XPO6	155	523	98.2	16	-	hg38	exon-exon	28138679-28138679	HUVEC
XPO7	30	196	99.4	8	+	XPO7	190	380	100	8	-	hg38	exon-exon	21982489-21982489;21972489-21982489;21972489-21972489	NHEK;NHEK;NHEK
XRCC3	1	425	99.6	14	-	KLC1	353	486	99.6	14	-	hg38	intron-exon	103683663-103703663;103683663-103693663;103673663-103703663;103673663-103693663	GM12878;GM12878;GM12878;GM12878
XRCC3	1	20596	100	14	-	KLC1	18442	36628	100	14	-	hg38	exon-intron	103683663-103713663;103673663-103713663	GM12878;GM12878
YARS1	3	342	99.2	1	+	SPEN	340	417	100	1	+	hg38	exon-exon	15933505-32784399	GM12878
YTHDC1	18	329	100	4	+	YTHDC1	326	382	100	4	-	hg38	exon-exon	68314282-68314282	IMR90
YY1AP1	3	338	99.8	1	+	YY1AP1	330	400	100	1	-	hg38	exon-exon	155660209-155670209;155660209-155660209	KBM-7;KBM-7
ZBTB33	6	319	99.7	X	+	TMEM255A	318	425	99.1	X	-	hg38	exon-intron	120256145-120266145	GM12878,IMR90,HMEC
ZBTB45	1	381	99	19	-	ZBTB45	367	586	100	19	+	hg38	intron-exon	58528633-58528633;58518633-58528633;58518633-58518633	GM12878;GM12878;GM12878
ZC3H14	15	103	98.9	14	-	ZC3H14	96	704	99.7	14	+	hg38	exon-exon	88603656-88603656;88593656-88603656	GM12878;GM12878
ZCCHC2	5	443	99.6	18	-	ZCCHC2	435	542	99.1	18	+	hg38	exon-exon	62582767-62582767;62572767-62582767	HUVEC;HUVEC
ZDHHC17	39	97	100	12	-	ZDHHC17	94	683	99.4	12	+	hg38	exon-exon	76846220-76846220	GM12878
ZDHHC17	4	105	99.1	12	-	ZDHHC17	102	386	99.7	12	+	hg38	exon-exon	76846220-76846220	GM12878
ZFPM2	68	608	98	8	-	ZFPM2-AS1	609	762	98	8	-	hg38	intron-exon	105807772-105917772;105797772-105917772	IMR90;HAP1
ZFYVE16	61	121	100	5	-	ZFYVE16	121	831	97.2	5	+	hg38	exon-exon	80474181-80474181	K562
ZMYND15	19	237	100	17	-	ZMYND15	238	551	99.4	17	+	hg38	exon-intron	4746705-4746705	K562
ZNF275	1	113	99.6	X	+	LOC105373378	114	246	99.6	X	+	hg38	exon-exon	153344542-153354542	K562
ZNF275	1	114	100	X	-	ZNF275	111	426	99.4	X	+	hg38	exon-exon	153344542-153354542;153344542-153344542	K562;K562
ZNF280D	1	77	97.5	15	+	ZNF280D	74	650	99.9	15	-	hg38	exon-exon	56637802-56637802;56627802-56637802;56627802-56627802	KBM-7;KBM-7;KBM-7
ZNF335	1	90	97.8	20	+	MYO1F	88	156	100	19	-	hg38	exon-exon	8555116-45951361	GM12878
ZNF423	10	135	100	16	+	ZNF423	135	363	97.9	16	-	hg38	exon-exon	49496089-49496089;49486089-49496089	IMR90-Dixon;IMR90-Dixon
ZNF451	1	88	98.9	6	-	ZNF451	82	204	99.2	6	+	hg38	exon-exon	57115202-57115202;57105202-57115202;57105202-57105202	RPE1;RPE1;RPE1
ZNF514	1	221	99.1	2	-	ZNF514	213	406	99.5	2	+	hg38	exon-exon	95154255-95154255	GM12878
ZNF532	30	276	99.6	18	-	VPS4B	271	338	100	18	-	hg38	intron-exon	58962768-63392767;58952768-63392767	GM12878;GM12878
ZNF609	1	71	100	15	-	ZNF609	69	192	100	15	+	hg38	exon-exon	64677801-64677801	GM12878
ZNF670-ZNF695	1	222	100	1	-	SCCPDH	220	574	100	1	+	hg38	exon-exon	246746698-247076698;246736698-247076698	K562;K562
ZNF696	1	65	100	8	+	ZC3H3	62	635	100	8	-	hg38	exon-exon	143287830-143437830;143297830-143447830;143287830-143447830;143297830-143437830	K562,RPE1;KBM-7,RPE1;KBM-7,RPE1;K562,KBM-7,RPE1
ZNF696	1	438	99.6	8	+	ZC3H3	435	836	98	8	-	hg38	exon-exon	143297830-143467830;143287830-143467830;143297830-143457830;143287830-143457830	RPE1;RPE1;KBM-7,RPE1;KBM-7,RPE1
ZNHIT3	14	137	100	17	+	MYO19	134	449	100	17	-	hg38	intron-exon	36494156-36504160	GM12878
ZRANB1	16	86	100	10	-	ZRANB1	85	783	99.5	10	+	hg38	exon-exon	124981431-124981431;124981431-124991431	GM12878;IMR90-Dixon
ZRANB3	1	172	98.5	2	-	RAB3GAP1	79	255	98.5	2	-	hg38	intron-exon	135162430-135162430	GM12878
ZRANB3	5	89	98.9	2	-	RAB3GAP1	85	207	98.4	2	+	hg38	intron-exon	135162430-135162430	GM12878
ZYG11B	1	63	98.5	1	+	TMEM54	53	113	98.4	1	-	hg38	intron-exon	32904399-52764328	GM12878
ZYX	15	252	100	7	-	ZYX	252	581	100	7	+	hg38	exon-exon	143382907-143382907	GM12878