ChimeraID | type_junction | gene1 | chro1 | start2 | gene2 | chro2 | strand2 |
---|
| intron-exon | NXN | 17 | - | ID3 | 1 | - |
| exon-exon | RNA45SN2 | 21 | + | CACNA1A | 19 | - |
| exon-exon | TGFB1 | 19 | - | TGFB2 | 1 | + |
| exon-exon | TGFB2 | 1 | + | TGFB1 | 19 | - |
| exon-exon | TGFB2 | 1 | + | TGFB3 | 14 | - |
| exon-exon | TGFB3 | 14 | - | TGFB2 | 1 | + |
| exon-exon | HMGA2 | 12 | + | LPP | 3 | + |
| intron-exon | LOC102724916 | 4 | - | MRPL1 | 4 | - |
| exon-exon | LDLR | 19 | - | ABAT | 16 | - |
| exon-exon | BNIP3L | 8 | - | MKI67 | 10 | + |
| exon-exon | PRC1 | 15 | + | PRC1-AS1 | 15 | + |
| exon-exon | ZNF562 | 19 | - | ZNF561-AS1 | 19 | - |
| exon-exon | GUCD1 | 22 | + | SNRPD3 | 22 | + |
| intron-exon | TXNRD1 | 12 | + | HBA1 | 16 | + |
| exon-exon | RPL32 | 3 | + | LAMA3 | 18 | - |
| exon-intron | ADAM12 | 10 | + | AC010201.3 | | + |
| exon-exon | ATP11B | 3 | - | GCLC | 6 | + |
| exon-exon | TOB1 | 17 | - | CHMP4B | 20 | + |
| exon-exon | TUBB | 6 | - | TUBB | 6 | + |
| exon-exon | CCT3 | 1 | + | TRAF3IP1 | 2 | - |
| intron-exon | ADAM12 | 10 | - | NONO | X | + |
| exon-exon | PABPC1 | 8 | + | NFE2L1 | 17 | - |
| exon-exon | TRAF3IP1 | 2 | + | CCT3 | 1 | - |
| intron-exon | FNBP1 | 9 | + | C1QTNF6 | 22 | + |
| exon-intron | SHOC2 | 10 | + | C2orf42 | 2 | - |
| exon-exon | TLN1 | 9 | + | TUBA1B | 12 | + |
| exon-exon | CPLX2 | 5 | - | CPLX2 | 5 | + |
| exon-intron | SIX6 | 14 | - | CEP135 | 4 | + |
| exon-intron | CEP43 | 6 | - | GABRR2 | 6 | + |
| intron-exon | DNAH9 | 17 | + | ZNF18 | 17 | + |
| exon-exon | ZBTB22 | 6 | + | PLCG1 | 20 | - |
| exon-intron | ANKRD36 | 2 | - | SMC5 | 9 | - |
| exon-intron | PSAP | 10 | + | ABCA4 | 1 | + |
| intron-exon | MRPL23 | 11 | + | ITSN1 | 21 | + |
| exon-exon | RN7SL4P | 3 | + | COL6A1 | 21 | + |
| exon-exon | BTF3 | 5 | - | STAU1 | 20 | + |
| exon-exon | COL3A1 | 2 | + | RPL7AP30 | 4 | - |
| exon-exon | RPS6 | 9 | + | POSTN | 13 | + |
| exon-exon | RPL26 | 17 | + | DVL3 | 3 | - |
| exon-exon | RPL37 | 5 | + | CPLANE1 | 5 | - |
| exon-exon | MARCKSP1 | 21 | + | APOL4 | 22 | + |
| exon-exon | CAVIN3 | 11 | + | LOC101927825 | 11 | + |
| exon-intron | CASP9 | 1 | - | CELA2B | 1 | - |
| exon-exon | TRMT112 | 11 | - | ESRRA | 11 | - |
| exon-exon | PLRG1 | 4 | + | ISLR | 15 | + |
| intron-exon | ZIM2 | 19 | + | PEG3-AS1 | 19 | + |
| intron-exon | ERI3 | 1 | - | DMAP1 | 1 | - |
| intron-exon | KIF28P | 1 | - | LINC01341 | 1 | - |
| exon-exon | SLC12A6 | 15 | - | TES | 7 | + |
| exon-exon | PFDN2 | 1 | - | ANXA11 | 10 | - |
| exon-intron | ALDH18A1 | 10 | + | KLHL18 | 3 | - |
| intron-exon | TDRD9 | 14 | + | SIKE1 | 1 | + |
| exon-exon | FTL | 19 | - | RANBP3 | 19 | + |
| exon-exon | IRGQ | 19 | - | SWI5 | 9 | + |
| exon-exon | UPF3A | 13 | - | SMARCA5 | 4 | - |
| exon-exon | SCOC | 4 | - | TACC1 | 8 | - |
| exon-exon | CTPS1 | 1 | - | RPL17-C18orf32 | 18 | + |
| exon-exon | CEP97 | 3 | - | THEM4 | 1 | + |
| intron-exon | AC008083.1 | 12 | - | LOC105369746 | 12 | - |
| exon-exon | CBR4 | 4 | - | RPL23 | 17 | - |
| exon-exon | COL1A1 | 17 | + | COL1A1 | 17 | - |
| exon-exon | FAM185A | 7 | + | PABPC1 | 8 | - |
| exon-exon | PDGFRA | 4 | + | SLC43A3 | 11 | - |
| intron-exon | PPARGC1A | 4 | - | NXN | 17 | - |
| intron-exon | UBTD2 | 5 | - | SLC38A1 | 12 | - |
| exon-intron | LRRC37A3 | 17 | - | LOC105376844 | 17 | + |
| exon-exon | MYO19 | 17 | + | MYO19 | 17 | - |
| exon-intron | RPL38 | 17 | - | PXN | 12 | - |
| intron-exon | ANKRD7 | 7 | - | LOC105375472 | | - |
| intron-exon | DPY19L4 | 8 | - | WSB1 | 17 | - |
| exon-intron | LOC105378482 | 10 | + | AL355512.1 | 10 | + |
| intron-exon | AL355512.1 | 10 | - | LOC105378482 | 10 | - |
| exon-exon | CALM1 | 14 | - | CALM3 | 19 | - |
| exon-intron | EXOSC1 | 10 | - | PGAM1 | 10 | - |
| exon-exon | COL3A1 | 2 | - | COL6A3 | 2 | + |
| intron-exon | PDPK2P | 16 | - | FLJ42627 | 16 | + |
| exon-exon | TPT1 | 13 | - | TPT1 | 13 | + |
| exon-intron | GLB1L | 2 | + | STK11IP | 2 | + |
| exon-intron | LOC101929950 | 17 | + | GPALPP1 | | + |
| intron-exon | SEC23A | 14 | - | ARL11 | 13 | + |
| exon-exon | SCN8A | 12 | - | TALAM1 | 11 | - |
| exon-exon | BEST1 | 11 | + | FTH1 | 11 | - |
| intron-exon | LINC01476 | 17 | - | FNBP1 | 9 | - |
| intron-exon | CAPN9 | 1 | - | AGT | 1 | - |
| exon-exon | SEC31A | 4 | + | SEC31A | 4 | - |
| exon-intron | BOLA3 | 2 | + | FP236383.3 | 21 | + |
| intron-exon | PGD | 1 | - | TRAF3IP1 | 2 | - |
| intron-exon | ATP1A1-AS1 | 1 | - | ATP1A1 | 1 | + |
| exon-exon | COL1A1 | 17 | + | TCF25 | 16 | - |
| exon-exon | NBEAL1 | 2 | - | SON | 21 | - |
| exon-exon | RPL13 | 16 | - | TALAM1 | 11 | - |
| exon-exon | MAP4 | 3 | + | HSPA8 | 11 | + |
| exon-exon | PTMS | 12 | + | TPH1 | 11 | - |
| exon-intron | ASS1 | 9 | + | LOC105376294 | 9 | - |
| intron-exon | ABCC5 | 3 | + | AP2M1 | 3 | + |
| exon-intron | ATXN2 | 12 | + | BRAP | 12 | + |
| intron-exon | KLF9-DT | 9 | + | TRPM3 | 9 | - |
| intron-exon | AL390195.1 | 1 | + | WDR77 | 1 | + |
| exon-exon | SQSTM1 | 5 | - | SQSTM1 | 5 | + |
| exon-exon | FAUP1 | 18 | + | CNOT2 | 12 | + |
| exon-exon | SNRNP48 | 6 | - | TMEM245 | 9 | + |
| exon-exon | TUBA1C | 12 | + | TUBA1B | 12 | - |
| exon-exon | DNAJC9 | 10 | + | DNAJC9 | 10 | - |
| exon-exon | POP4 | 19 | - | LCN2 | 9 | + |
| exon-intron | CYREN | 7 | - | PANTR1 | 2 | - |
| intron-exon | SDK1 | 7 | - | USP4 | 3 | + |
| exon-intron | CACNA2D2 | 3 | - | WDR86 | 7 | + |
| intron-exon | GTF2IP4 | 7 | + | TALAM1 | 11 | - |
| exon-intron | TUBB4A | 19 | + | DPP6 | 7 | + |
| exon-exon | TMEM248 | 7 | + | LOC112268006 | 7 | - |
| exon-exon | ARF5 | 7 | + | ARF5 | 7 | - |
| exon-exon | FTL | 19 | + | LOC105377771 | 5 | - |
| exon-exon | RNA45SN1 | 21 | + | SRRT | 7 | - |
| exon-exon | ZNF398 | 7 | + | ZNF398 | | - |
| exon-exon | RASA4B | 7 | - | EIF3B | 7 | - |
| exon-intron | PAXIP1 | 7 | - | ADAM12 | 10 | + |
| intron-exon | LOC107986832 | 7 | - | LINC01007 | 7 | - |
| exon-intron | HOXA10-AS | 7 | + | HOXA10-HOXA9 | 7 | - |
| exon-exon | RAC2 | 22 | + | RAC2 | 22 | - |
| intron-exon | MAF | 16 | - | ARL4C | 2 | - |
| exon-intron | ATP6 | MT | + | COX3 | MT | + |
| exon-intron | ZNF808 | 19 | + | ZNF701 | 19 | + |
| exon-exon | CD63 | 12 | + | VPS35 | 16 | - |
| exon-exon | SNF8 | 17 | - | SNF8 | 17 | + |
| exon-exon | PLXNB1 | 3 | + | SLC25A1 | 22 | - |
| intron-exon | KCND2 | 7 | + | SMN2 | 5 | - |
| exon-exon | NIBAN2 | 9 | + | ZDHHC9 | X | - |
| exon-exon | NOP58 | 2 | - | DGCR2 | 22 | + |
| exon-exon | LOC105372233 | 19 | + | BSG | 19 | + |
| exon-exon | RNA45SN3 | 21 | + | PSD3 | 8 | - |
| exon-exon | ATP6 | MT | + | HSP90AA1 | 14 | - |
| exon-intron | ND4L | MT | + | ND4 | MT | + |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN1 | 21 | + |
| exon-intron | ATP6 | MT | + | COX3 | MT | + |
| exon-exon | XRCC6 | 22 | + | ATP5MGP2 | | - |
| exon-exon | BTF3 | 5 | + | DENND5A | 11 | - |
| intron-exon | HNRNPR | 1 | - | COX2 | MT | + |
| exon-exon | ND6 | MT | - | ND5 | MT | - |
| exon-exon | ND5 | MT | - | ND4 | MT | - |
| exon-exon | DFFA | 1 | + | RNA45SN1 | 21 | - |
| intron-exon | RNR2 | MT | + | RPL3P4 | 14 | - |
| intron-exon | RNA18SP5 | 21 | + | TPT1 | 13 | - |
| intron-exon | MAGED2 | X | + | MDH1 | 2 | + |
| intron-exon | RAB3GAP2 | 1 | + | MORF4L1P1 | 1 | + |
| intron-exon | METTL21A | 2 | - | CREB1 | 2 | + |
| exon-exon | RNA45SN1 | 21 | + | SORBS2 | 4 | - |
| intron-exon | HFM1 | 1 | - | UBE2C | 20 | + |
| exon-intron | ND4 | MT | + | RNR2 | MT | + |
| exon-exon | RNA45SN3 | 21 | + | MED29 | 19 | + |
| exon-exon | RNA45SN3 | 21 | + | LINC00667 | 18 | + |
| exon-exon | RNA45SN3 | 21 | + | TCAF1 | 7 | - |
| intron-exon | HFM1 | 1 | - | FTH1 | 11 | - |
| exon-exon | MYH7 | 14 | - | BIRC6 | 2 | + |
| intron-exon | RNA18SP5 | 21 | + | TUFM | 16 | - |
| exon-exon | RNA45SN3 | 21 | + | FTH1 | 11 | - |
| exon-intron | TTN | 2 | - | ZEB1 | 10 | + |
| exon-exon | ANO6 | 12 | + | RPSAP12 | | - |
| exon-exon | RNA45SN3 | 21 | + | FZD7 | 2 | + |
| exon-exon | RNA45SN3 | 21 | + | COX3 | MT | + |
| exon-exon | RNA45SN2 | 21 | + | ZFAND5 | 9 | - |
| intron-exon | LHFPL3 | 7 | + | EIF4B | 12 | + |
| exon-exon | TSC22D3 | X | + | TSC22D3 | X | - |
| exon-exon | KNOP1 | 16 | + | KNOP1 | 16 | - |
| exon-exon | RTN3 | 11 | - | TCERG1 | 5 | + |
| exon-exon | AATF | 17 | - | AATF | 17 | + |
| exon-exon | SNF8 | 17 | + | LDHA | 11 | + |
| exon-exon | AFF1 | 4 | + | UBE2D3 | 4 | - |
| intron-exon | SLC29A2 | 11 | + | RACK1 | 5 | - |
| exon-exon | LIPH | 3 | + | LIPH | 3 | - |
| exon-exon | SERPINH1 | 11 | + | SERPINH1 | 11 | - |
| exon-exon | ARID4B | 1 | - | ARID4B | 1 | + |
| intron-exon | RNF216 | 7 | + | PMS2 | 7 | + |
| exon-exon | POLR1F | 7 | - | POLR1F | 7 | + |
| intron-exon | CNPY3-GNMT | 6 | - | RPL7L1 | 6 | - |
| exon-exon | IFITM3 | 11 | + | IFITM3 | 11 | - |
| exon-exon | ACER3 | 11 | - | ACER3 | 11 | + |
| exon-exon | TERF2IP | 16 | - | TERF2IP | 16 | + |
| exon-exon | BRD1 | 22 | - | BRD1 | 22 | + |
| intron-exon | CSNK1D | 17 | - | SLC16A3 | 17 | - |
| exon-exon | LSM12 | 17 | + | LSM12P1 | 8 | - |
| exon-exon | NCAM1 | 11 | - | PKM | 15 | - |
| intron-exon | CUL4B | X | + | MCTS1 | X | + |
| exon-exon | SLA2 | 20 | - | RAB5IF | 20 | - |
| exon-exon | RNF10 | 12 | - | RNF10 | 12 | + |
| exon-exon | IRS1 | 2 | + | RHBDD1 | 2 | + |
| exon-exon | LRRC59 | 17 | + | LRRC59 | 17 | - |
| exon-exon | RAB14 | 9 | + | RAB14 | 9 | - |
| exon-intron | SDHAF4 | 6 | - | PTGR1 | 9 | + |
| exon-intron | KCTD7 | 7 | + | C6orf62 | 6 | - |
| intron-exon | LOC105369632 | 12 | + | RPL13P5 | | + |
| exon-exon | ZNF275 | X | - | ZNF275 | X | + |
| exon-exon | LOC105371099 | 16 | - | NOMO3 | 16 | - |
| exon-intron | TCP1 | 6 | + | MACF1 | 1 | - |
| exon-exon | CLIC1 | 6 | + | ZNHIT3 | 17 | + |
| exon-exon | DDX21 | 10 | + | DDX21 | 10 | - |
| exon-exon | EIF5A | 17 | + | HMGN2 | 1 | + |
| exon-exon | SF3B3 | 16 | - | SF3B3 | 16 | + |
| intron-exon | RNF175 | 4 | - | TRIM2 | 4 | - |
| exon-intron | INS-IGF2 | 11 | + | MBNL1 | 3 | + |
| exon-intron | ACTB | 7 | + | LINC02074 | | + |
| exon-intron | RIPK1 | 6 | - | RIPK1 | 6 | + |
| exon-exon | LAMA3 | 18 | - | LAMA3 | 18 | + |
| exon-exon | FAM20A | 17 | - | PRKAR1A | 17 | - |
| exon-intron | PYGL | 14 | + | STON1-GTF2A1L | 2 | + |
| intron-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| intron-exon | LOC101928034 | 1 | + | EGLN3-AS1 | | + |
| exon-intron | PYCARD | 16 | + | PYCARD-AS1 | 16 | + |
| exon-intron | CNOT11 | 2 | - | CUX1 | 7 | - |
| intron-exon | ALK | 2 | - | HSP90B1 | 12 | - |
| exon-exon | TENT4B | 16 | + | TENT4B | 16 | - |
| exon-exon | PLEKHJ1 | 19 | + | PAPSS2 | 10 | + |
| exon-exon | CBX5 | 12 | + | ZEB2 | 2 | - |
| intron-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| intron-exon | HHIP | 4 | - | HHIP-AS1 | | - |
| exon-intron | ND1 | MT | - | RNR2 | MT | - |
| exon-exon | RNA45SN1 | 21 | + | BRI3 | 7 | + |
| exon-intron | PLEC | 8 | - | LOC643339 | 12 | - |
| exon-exon | NFATC2IP | 16 | - | TMEM9B | 11 | + |
| exon-intron | LOC105378179 | 14 | - | NUP153 | 6 | - |
| exon-exon | RPL3P7 | 6 | - | RPL3 | 22 | + |
| exon-exon | MIDN | 19 | - | TM4SF1 | 3 | - |
| exon-exon | SRRM1P1 | 8 | - | SRRM1 | 1 | - |
| exon-exon | CD59 | 11 | + | RPS26P25 | 4 | - |
| exon-intron | LIPH | 3 | + | PTPRK | 6 | + |
| exon-exon | MESD | 15 | - | LOC107984749 | | - |
| exon-exon | TAP2 | 6 | - | HLA-DOB | 6 | - |
| exon-exon | BECN1 | 17 | - | BECN1 | 17 | + |
| exon-exon | RPLP0P9 | 5 | - | NDUFA13 | 19 | + |
| exon-exon | KAT8 | 16 | + | KAT8 | 16 | - |
| exon-exon | EIF1 | 17 | - | S100A11 | 1 | - |
| exon-exon | RPL6P27 | 18 | + | MAPK6 | 15 | + |
| exon-intron | CIAO1 | 2 | + | UVRAG | 11 | + |
| intron-exon | UVRAG | 11 | - | CIAO1 | 2 | - |
| exon-exon | RPL32 | 3 | + | SLPI | 20 | - |
| exon-exon | RPL3P4 | 14 | + | EIF1 | 17 | + |
| intron-exon | OPHN1 | X | - | AKIRIN1 | 1 | + |
| intron-exon | RBM47 | 4 | + | CNN2 | 19 | - |
| exon-exon | SLC11A2 | 12 | - | HIGD1C | 12 | - |
| exon-exon | RBFOX2 | 22 | + | BNIP2 | 15 | - |
| intron-exon | KIZ | 20 | + | TMEM59 | 1 | - |
| exon-exon | ALDH7A1 | 5 | + | RPS8P8 | 5 | + |
| exon-exon | POLR2I | 19 | + | DBI | 2 | + |
| exon-exon | YARS1 | 1 | + | SPEN | 1 | + |
| exon-exon | ANKRD54 | 22 | + | EIF3L | 22 | + |
| exon-exon | TGFBI | 5 | - | HLA-C | 6 | - |
| exon-intron | ADAM9 | 8 | - | PRPF6 | 20 | + |
| exon-exon | PTMAP5 | 13 | - | PTMA | 2 | + |
| exon-exon | HLA-C | 6 | + | TGFBI | 5 | + |
| exon-exon | SLC35F5 | 2 | + | PPP2CB | 8 | - |
| exon-intron | WDR1 | 4 | + | GCDH | 19 | + |
| exon-exon | RNU6-2 | 19 | + | STK25 | | - |
| exon-exon | ST8SIA1 | 12 | + | ST8SIA1 | 12 | - |
| exon-intron | DENND11 | 7 | - | LRRC7 | 1 | + |
| exon-exon | RPL7P9 | 1 | + | RNLS | 10 | - |
| intron-exon | USP3-AS1 | 15 | - | SOD1 | 21 | + |
| exon-intron | H3-3B | 17 | + | AK6 | 5 | - |
| exon-intron | HMGB2 | 4 | - | AC092306.1 | 19 | + |
| exon-exon | CNOT7 | 8 | + | CNOT7 | 8 | - |
| exon-exon | POMT1 | 9 | - | ANP32A | 15 | - |
| exon-exon | CNOT7 | 8 | + | CNOT7 | 8 | - |
| exon-intron | HLA-DQA1 | 6 | - | SRSF9 | 12 | - |
| exon-intron | LOC105376396 | 10 | + | AC025946.1 | 10 | + |
| exon-exon | SELENBP1 | 1 | + | UBE4B | 1 | + |
| intron-exon | ZNF704 | 8 | - | SSU72 | 1 | + |
| exon-exon | RPS4X | X | + | RNA45SN2 | 21 | - |
| exon-intron | PNO1 | 2 | + | RP11-474G23.1 | | + |
| intron-exon | PKP4-AS1 | 2 | - | PKP4 | 2 | - |
| exon-exon | XIRP2 | 2 | + | XIRP2 | 2 | - |
| exon-exon | RTN4 | 2 | + | RTN4 | 2 | - |
| exon-intron | RTN4 | 2 | + | RTN4 | 2 | - |
| exon-exon | ITGA6 | 2 | + | PDK1 | 2 | + |
| exon-exon | ZFR | 5 | + | ZFR | 5 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| exon-exon | SRSF2 | 17 | + | COX3 | MT | + |
| exon-exon | HNRNPA1P48 | 16 | + | COX2 | MT | + |
| exon-exon | PLPPR3 | 19 | - | RPS2 | 16 | - |
| exon-exon | RPL21P75 | 7 | + | CD99 | Y | + |
| exon-exon | GLUD1 | 10 | + | GLUD1 | 10 | - |
| exon-exon | RBM4 | 11 | - | RBM4 | 11 | + |
| exon-exon | SLA2 | 20 | - | RAB5IF | 20 | - |
| exon-intron | C5AR2 | 19 | - | NPAS1 | 19 | - |
| exon-exon | ZRSR2 | X | + | AP1S2 | X | - |
| exon-intron | MAP4 | 3 | - | PDZRN4 | 12 | - |
| exon-exon | CCT7 | 2 | + | CCT7 | 2 | - |
| exon-exon | IFI6 | 1 | + | PRSS8 | 16 | + |
| exon-intron | RBCK1 | 20 | - | NUB1 | 7 | - |
| intron-exon | ART3 | 4 | + | SCARB2 | 4 | + |
| exon-exon | GADD45GIP1 | 19 | - | RAD23A | 19 | - |
| exon-exon | SPARCL1 | 4 | - | INIP | 9 | - |
| intron-exon | TSPAN9 | 12 | + | TNNT1 | 19 | + |
| exon-exon | RPS8 | 1 | + | EXT2 | 11 | + |
| exon-exon | MYBPC1 | 12 | + | TPM2 | 9 | - |
| exon-exon | RAF1 | 3 | - | RAF1 | 3 | + |
| exon-intron | ILF2P1 | 3 | + | CTNNAL1 | 9 | - |
| exon-intron | ATF6B | 6 | - | SPAG5-AS1 | 17 | - |
| exon-exon | RAC1 | 7 | - | RAC1 | 7 | + |
| exon-exon | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| intron-exon | FAM153CP | 5 | - | ARID1A | 1 | - |
| intron-exon | AOPEP | 9 | - | COPS7A | 12 | + |
| exon-intron | MYH7 | 14 | + | CLCN1 | 7 | - |
| exon-exon | TNNT3 | 11 | + | TNNT3 | 11 | - |
| exon-intron | RPS24 | 10 | - | HERC2P2 | 15 | - |
| exon-exon | SDHD | 11 | + | XIRP2 | 2 | + |
| exon-exon | LOC101928371 | 2 | + | EIF2AK3 | 2 | - |
| exon-exon | RNA45SN1 | 21 | + | MIF | 22 | + |
| exon-exon | GTPBP1 | 22 | - | GTPBP1 | 22 | + |
| exon-exon | NID1 | 1 | + | NID1 | 1 | - |
| exon-exon | TUBA1B | 12 | + | TUBA1A | 12 | + |
| intron-exon | MXD1 | 2 | - | SNRNP27 | 2 | - |
| exon-exon | FAM214B | 9 | - | FAM214B | 9 | + |
| intron-exon | CSNK2A2 | 16 | - | LOC101927556 | 16 | + |
| exon-exon | DENND11 | 7 | - | AGK | 7 | + |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN1 | 21 | - |
| intron-exon | AC002310.13 | 16 | + | ZNF764 | 16 | + |
| intron-exon | PDE9A | 21 | + | PDE9A | 21 | - |
| exon-exon | PCOLCE | 7 | + | PCOLCE | 7 | - |
| exon-exon | KLK3 | 19 | + | KLK3 | 19 | - |
| exon-exon | KLK3 | 19 | + | KLK3 | 19 | - |
| exon-exon | BCCIP | 10 | + | BCCIP | 10 | - |
| exon-exon | PCOLCE | 7 | + | PCOLCE | 7 | - |
| exon-intron | MCM8 | 20 | + | MCM8-AS1 | 20 | - |
| exon-exon | SORD | 15 | + | SORD | 15 | - |
| exon-exon | LOC100129917 | 4 | - | LOC107986211 | 4 | - |
| exon-exon | BCL10 | 1 | + | CLTA | 9 | + |
| exon-exon | AMZ2 | 17 | - | RN7SK | 6 | - |
| exon-exon | ADH5 | 4 | - | ADH5 | 4 | + |
| exon-exon | RCBTB1 | 13 | - | RCBTB1 | 13 | + |
| exon-intron | CDC16 | 13 | + | LOC105370384 | 13 | - |
| exon-exon | ND1 | MT | + | ND1 | MT | - |
| exon-exon | CNNM3 | 2 | + | CNNM3 | 2 | - |
| exon-exon | NOMO2 | 16 | - | LOC102723728 | 16 | + |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | LONP2 | 16 | + | SIAH1 | 16 | - |
| exon-exon | ERBB3 | 12 | + | LOC105369782 | 12 | - |
| exon-exon | COX1 | MT | + | COX1 | MT | - |
| exon-intron | FARS2 | 6 | + | FARS2 | 6 | - |
| exon-exon | IVD | 15 | - | IVD | 15 | + |
| intron-exon | AC108516.2 | 4 | - | UGGT1 | 2 | - |
| exon-exon | MRFAP1 | 4 | + | TACC2 | 10 | + |
| exon-exon | SNX9 | 6 | - | SNX9 | 6 | + |
| exon-exon | PALM2AKAP2 | 9 | + | FGF18 | 5 | + |
| exon-exon | SRI | 7 | + | RGPD6 | 2 | - |
| exon-exon | CPD | 17 | + | GSTO1 | 10 | + |
| exon-exon | RNA45SN2 | 21 | + | EIF3F | 11 | + |
| exon-exon | MSN | X | - | CAB39 | 2 | - |
| exon-intron | CD109 | 6 | + | RAB18 | 10 | + |
| intron-exon | VCAN | 5 | - | ST6GALNAC2 | 17 | + |
| intron-exon | SPECC1L-ADORA2A | 22 | + | ZNF529 | 19 | - |
| intron-exon | FBXL20 | 17 | + | MED1 | 17 | + |
| intron-exon | SAMD12 | 8 | - | CAB39 | 2 | - |
| intron-exon | ADNP | 20 | - | BCAS4 | 20 | - |
| exon-exon | PAF1 | 19 | - | GET3 | 19 | + |
| intron-exon | RFX2 | 19 | + | LOC105372255 | 19 | + |
| exon-exon | CRLF3 | 17 | - | ARHGEF6 | X | - |
| exon-exon | LOC101928354 | 6 | - | ZDHHC14 | 6 | + |
| exon-exon | RPL3 | 22 | - | SOX8 | 16 | + |
| exon-intron | ETS1 | 11 | - | GXYLT2 | 3 | + |
| exon-exon | MGAT5 | 2 | + | CD22 | 19 | + |
| exon-exon | PFN1 | 17 | + | DES | 2 | - |
| exon-exon | ZNF263 | 16 | - | ZNF263 | 16 | + |
| exon-exon | MLEC | 12 | + | MLEC | 12 | - |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN2 | 21 | + |
| exon-exon | PIAS2 | 18 | - | PIAS2 | 18 | + |
| intron-exon | ANKRD46 | 8 | - | RPL7P9 | 1 | - |
| intron-exon | RNA18SP5 | 21 | + | KCNJ3 | | + |
| exon-exon | RNA45SN1 | 21 | + | TPT1 | 13 | - |
| intron-exon | RNR1 | MT | + | TOP2B | 3 | - |
| exon-exon | NUCKS1 | 1 | - | SEMA3D | 7 | - |
| exon-exon | COL4A1 | 13 | - | EEF1A1P5 | 9 | + |
| exon-exon | RNA45SN3 | 21 | + | ACTG1 | 17 | - |
| exon-exon | RNA45SN2 | 21 | + | CYTB | MT | + |
| exon-exon | GOLGA6L9 | 15 | + | GOLGA6L17P | 15 | + |
| exon-intron | DICER1 | 14 | + | NEK7 | 1 | - |
| exon-exon | MGAT5 | 2 | + | RUNX1T1 | 8 | - |
| exon-exon | MGA | 15 | + | TMED7-TICAM2 | 5 | - |
| exon-exon | PLPPR3 | 19 | - | PTBP1 | 19 | - |
| intron-exon | RAD51B | 14 | + | MIS18BP1 | 14 | - |
| intron-exon | IMMT | 2 | - | LOC100506302 | 7 | - |
| exon-intron | LARS1 | 5 | + | DHRS3 | 1 | + |
| intron-exon | APOO | X | + | LOC100887080 | 16 | - |
| intron-exon | EFCAB14-AS1 | 1 | + | EFCAB14 | 1 | - |
| exon-exon | MECP2 | X | + | SAMD9L | 7 | + |
| exon-exon | HEXB | 5 | - | SSRP1 | 11 | + |
| exon-exon | FREM2 | 13 | - | QKI | 6 | - |
| exon-intron | USP33 | 1 | + | USP33 | 1 | - |
| exon-exon | INPP5B | 1 | - | PDCL | 9 | - |
| exon-exon | DYNC1H1 | 14 | + | MPP6 | 7 | + |
| exon-intron | SLC2A9 | 4 | + | AC005674.2 | | + |
| intron-exon | LOC100506207 | 6 | - | LOC107986562 | 6 | - |
| exon-exon | MSC | 8 | + | SORBS1 | 10 | + |
| exon-intron | COX11 | 17 | - | TOM1L1 | | - |
| exon-exon | PRR29 | 17 | + | IL15 | 4 | - |
| exon-exon | RNA45SN3 | 21 | + | MKI67 | 10 | - |
| intron-exon | INPP5K | 17 | - | CRK | 17 | - |
| exon-exon | CD74 | 5 | + | CD74 | 5 | - |
| exon-exon | NEK9 | 14 | + | NEK9 | 14 | - |
| exon-exon | INTS5 | 11 | + | INTS5 | 11 | - |
| exon-intron | LCP1 | 13 | + | SLC43A1 | 11 | + |
| exon-exon | ZNF827 | 4 | + | C2CD5 | 12 | + |
| intron-exon | PHF20L1 | 8 | - | RAD51AP1 | 12 | + |
| intron-exon | AC068295.1 | 3 | - | LOC105374265 | 3 | - |
| exon-exon | GNL3L | X | - | GNL3L | X | + |
| intron-exon | BRWD3 | X | - | HOOK3 | 8 | - |
| exon-exon | CD68 | 17 | - | STK17B | 2 | + |
| exon-intron | BCLAF3 | X | + | TMEM39A | 3 | + |
| exon-exon | SUSD6 | 14 | + | PPP2R5E | 14 | - |
| intron-exon | NAA50 | 3 | - | SNAPC3 | 9 | + |
| intron-exon | ARL17A | 17 | - | ARL17B | 17 | - |
| exon-intron | LOC105373105 | X | + | AL683807.1 | X | + |
| intron-exon | NRTN | 19 | - | DUS3L | 19 | - |
| exon-intron | ARPC2 | 2 | - | SLC15A4 | 12 | - |
| exon-intron | UBXN2A | 2 | - | LOC105374773 | 2 | - |
| exon-exon | NUP153 | 6 | - | NUP153 | 6 | + |
| exon-exon | PRKCSH | 19 | - | PURB | 7 | + |
| intron-exon | CASTOR2 | 7 | + | SPDYE2B | 7 | + |
| exon-exon | DBP | 19 | - | SPHK2 | 19 | - |
| exon-intron | LOC105378647 | 1 | - | AGO3 | 1 | - |
| exon-intron | LOC112268270 | 20 | + | AL122058.1 | 20 | + |
| exon-intron | PTMAP2 | 5 | + | AC100779.1 | | + |
| exon-intron | MKI67 | 10 | + | LINC01163 | 10 | + |
| exon-exon | FCRL1 | 1 | - | KATNA1 | 6 | - |
| exon-intron | LOC100131294 | 12 | - | VSIR | 10 | - |
| exon-intron | PANX1 | 11 | - | HEPHL1 | 11 | - |
| exon-exon | NT5DC2 | 3 | + | NT5DC2 | 3 | - |
| intron-exon | LOC105374838 | 2 | + | UBE2T | | - |
| intron-exon | WDR93 | 15 | + | ANKRD44 | 2 | - |
| intron-exon | NPIPB2 | 16 | + | TNFRSF17 | 16 | + |
| exon-exon | EHD4 | 15 | + | EHD4 | 15 | - |
| exon-exon | EHD4 | 15 | + | EHD4 | 15 | - |
| exon-exon | HMGA1 | 6 | + | LTB | 6 | - |
| exon-exon | C5orf24 | 5 | + | TBC1D20 | 20 | - |
| exon-exon | LTB | 6 | + | HMGA1P3 | 12 | + |
| intron-exon | PWWP2A | 5 | - | TTC1 | 5 | + |
| intron-exon | STXBP5 | 6 | - | FAM126A | 7 | - |
| exon-exon | ISY1-RAB43 | 3 | + | RAB43P1 | 16 | - |
| exon-exon | HDGF | 1 | + | HDGF | 1 | - |
| exon-exon | COX8A | 11 | - | AGFG1 | 2 | + |
| exon-exon | NOL6 | 9 | + | NOL6 | 9 | - |
| exon-intron | SUPT4H1 | 17 | - | MTND1P23 | 1 | + |
| exon-exon | LOC105378539 | 10 | + | FAM53B | 10 | - |
| exon-exon | LOC105371371 | 16 | + | OSGIN1 | 16 | + |
| exon-exon | PRICKLE3 | X | - | PLP2 | X | - |
| intron-exon | VPS28 | 8 | + | TONSL-AS1 | 8 | + |
| exon-exon | FAM83E | 19 | - | PKM | 15 | - |
| exon-exon | SH2B1 | 16 | + | GABARAPL1 | 12 | + |
| exon-exon | SENP3-EIF4A1 | 17 | - | SENP3-EIF4A1 | 17 | + |
| exon-intron | ZNF250 | 19 | - | AF235103.3 | 19 | - |
| exon-exon | FGF10 | 5 | - | FGF10 | 5 | + |
| exon-intron | C3 | 19 | - | AC007686.4 | | + |
| exon-exon | TBC1D14 | 4 | + | TBC1D14 | 4 | - |
| exon-intron | RANBP1 | 22 | - | DRICH1 | 22 | - |
| exon-exon | S100A11 | 1 | + | LARP1B | 4 | - |
| exon-exon | TMCO3 | 13 | - | TFPI2 | 7 | + |
| exon-exon | PPP4R3B | 2 | - | TAGLN2 | 1 | - |
| exon-exon | RPL37P2 | 11 | + | CFL1 | 11 | - |
| exon-intron | NAGA | 22 | - | WBP2NL | 22 | - |
| exon-intron | IL32 | 16 | + | LOC105371058 | | + |
| exon-exon | EMC1 | 1 | - | KNTC1 | 12 | + |
| exon-exon | OR6J1 | 14 | - | DAD1 | 14 | - |
| exon-exon | DIPK1B | 9 | - | DIPK1B | 9 | + |
| exon-intron | PPME1 | 11 | + | P4HA3 | 11 | + |
| exon-intron | EIF4B | 12 | - | EIF4B | 12 | + |
| exon-exon | AGR2 | 7 | + | CSE1L | 20 | + |
| exon-exon | PGRMC2 | 4 | - | FTH1 | 11 | - |
| exon-exon | RN7SL3 | 14 | - | MDM4 | 1 | + |
| exon-exon | TRBJ1-3 | 7 | + | TRBC1 | 7 | + |
| exon-intron | GAPDH | 12 | - | FAM153CP | 5 | + |
| exon-exon | SMG5 | 1 | - | OFD1 | X | + |
| exon-exon | UNC119B | 12 | - | UNC119B | 12 | + |
| exon-exon | NFYC | 1 | + | RHEB | 7 | - |
| exon-exon | TLK1 | 2 | + | TLK1 | 2 | - |
| exon-exon | BRD3OS | 9 | + | BRD3 | 9 | + |
| exon-exon | RPL23AP53 | 8 | - | LOC101927506 | 8 | - |
| exon-exon | CARD10 | 22 | - | CAMK2N1 | 1 | - |
| exon-exon | EEF1A1P5 | 9 | + | RPL41 | 12 | + |
| exon-exon | SYP | X | - | CYFIP2 | 5 | + |
| intron-exon | LIN9 | 1 | - | PAFAH1B2 | 11 | + |
| intron-exon | SLC25A26 | 3 | + | NAA25 | 12 | - |
| exon-exon | C15orf40 | 15 | - | ZNF529 | 19 | - |
| exon-exon | PPP2R2C | 4 | - | CDK5RAP1 | 20 | - |
| exon-exon | NCOA1 | 2 | - | NCOA1 | 2 | + |
| exon-exon | CACNA1B | 9 | + | CALM1 | 14 | + |
| exon-exon | FABP5 | 8 | + | FABP4 | 8 | - |
| intron-exon | FOXP1 | 3 | + | LOC105377155 | | + |
| intron-exon | AL158832.2 | 9 | - | LOC105379251 | 9 | + |
| exon-exon | DTNA | 18 | - | DTNA | 18 | + |
| exon-intron | RN7SL4P | 3 | + | KDM2B-DT | | + |
| exon-exon | MALAT1 | 11 | + | OSBPL6 | 2 | + |
| exon-exon | USP11 | X | - | USP11 | X | + |
| intron-exon | FGF5 | 4 | + | CFAP299 | 4 | + |
| intron-exon | CA10 | 17 | + | UBN1 | 16 | + |
| intron-exon | PLCB3 | 11 | + | RIPOR1 | 16 | + |
| exon-exon | VPS4A | 16 | + | VPS4A | 16 | - |
| intron-exon | SF3B3 | 16 | + | SF1 | 11 | - |
| intron-exon | AL354718.3 | 19 | - | LOC100420778 | 2 | - |
| exon-intron | GGPS1 | 1 | + | INO80B-WBP1 | 2 | + |
| exon-exon | MINCR | 8 | + | STXBP1 | 9 | + |
| intron-exon | SYT1 | 12 | + | NUP133 | 1 | - |
| exon-exon | TRMT10B | 9 | - | LDB3 | 10 | + |
| intron-exon | LOC100507291 | 11 | + | TAGLN | 11 | + |
| exon-intron | VWF | 12 | - | ACTN1 | 14 | - |
| exon-exon | INO80B-WBP1 | 2 | + | WBP1P2 | | + |
| intron-exon | SOX2-OT | 3 | + | OLFML2B | 1 | - |
| exon-exon | MCC | 5 | + | MCC | 5 | - |
| exon-exon | CCDC14 | 3 | - | SDCCAG8 | 1 | + |
| intron-exon | ZNRF2P1 | 7 | + | RHNO1 | 12 | + |
| exon-exon | ZFHX4-AS1 | 8 | - | LOC107986952 | 8 | - |
| exon-exon | SNU13 | 22 | - | RARA | 17 | + |
| intron-exon | OSBPL5 | 11 | - | TECRP1 | 4 | - |
| exon-exon | SPAG16 | 2 | + | SPP1 | 4 | + |
| exon-exon | RBM3 | X | + | ILK | 11 | + |
| exon-exon | INF2 | 14 | + | VPS13C | 15 | - |
| intron-exon | IL16 | 15 | + | IDS | X | - |
| intron-exon | TANGO6 | 16 | + | TRIM72 | 16 | + |
| exon-exon | FBN1 | 15 | - | DPYSL3 | 5 | - |
| exon-exon | RNU6-9 | 19 | + | ITGB1 | 10 | - |
| intron-exon | RNU6-9 | 19 | + | ITGB1 | 10 | - |
| exon-exon | HSP90AA1 | 14 | + | HSP90AA1 | 14 | - |
| intron-exon | KIF13A | 6 | - | EPB41L4A | 5 | - |
| exon-exon | LOC644456 | 2 | + | LINC01122 | 2 | + |
| exon-exon | NEK4 | 3 | - | ERCC1 | 19 | - |
| exon-exon | WASF2 | 1 | + | WASF2 | 1 | - |
| exon-exon | SCAF8 | 6 | + | TIAM2 | 6 | + |
| intron-exon | AC084866.1 | 4 | + | MFAP3L | 4 | + |
| exon-exon | LDHA | 11 | - | LDHA | 11 | + |
| exon-intron | NDUFA3 | 19 | + | TFPT | 19 | + |
| exon-exon | COL3A1 | 2 | + | MTCH1 | 6 | - |
| exon-exon | SHISA8 | 22 | - | ANKRD11 | 16 | - |
| exon-exon | MALAT1 | 11 | + | IPO13 | 1 | + |
| exon-exon | ARID5B | 10 | + | CDAN1 | 15 | - |
| intron-exon | ARHGAP12 | 10 | - | CLN8 | 8 | - |
| exon-intron | LINC00535 | 8 | + | LOC105375643 | | + |
| exon-intron | HBG2 | 11 | + | LOC106099065 | 11 | + |
| exon-intron | HBG2 | 11 | + | LOC106099065 | 11 | + |
| exon-exon | SUZ12P1 | 17 | + | IFNAR2 | 21 | + |
| exon-exon | PRPF40B | 12 | + | MIDN | 19 | + |
| exon-intron | AKAP13 | 15 | + | AGXT | | + |
| intron-exon | KLHDC1 | 14 | + | GPI | 19 | + |
| exon-exon | CRP | 1 | - | SEPHS2 | 16 | - |
| exon-exon | TNRC18 | 7 | - | MFSD12 | 19 | + |
| exon-exon | ANKRD11 | 16 | - | H3P16 | 4 | - |
| exon-exon | ATG13 | 11 | + | MYO15B | 17 | + |
| exon-exon | FGA | 4 | - | NEU1 | 6 | - |
| intron-exon | MST1 | 3 | - | GPX1 | | - |
| exon-exon | APOC4-APOC2 | 19 | + | DLG3 | X | + |
| exon-intron | FXR2 | 17 | - | MPDU1 | 17 | - |
| exon-intron | MYBPC2 | 19 | + | MYBPC2 | 19 | - |
| exon-exon | COL1A2 | 7 | - | COL1A2 | 7 | + |
| exon-exon | PRRG1 | X | + | PLP1 | X | + |
| exon-exon | SLC35G2 | 3 | + | MBP | 18 | - |
| exon-exon | LOC105376384 | 10 | - | FBH1 | 10 | - |
| exon-intron | MARK1 | 1 | - | PFKP | 10 | - |
| exon-exon | GPM6A | 4 | - | ANKRD17 | 4 | - |
| exon-exon | ZNF626 | 19 | - | ADI1 | 2 | - |
| exon-exon | EIF4H | 7 | + | EIF4HP1 | 7 | + |
| exon-intron | POLE4 | 2 | + | TACR1 | 2 | + |
| intron-exon | DGKI | 7 | + | SCMH1 | 1 | - |
| intron-exon | ZSWIM6 | 5 | + | CDK6 | 7 | - |
| exon-intron | ZBTB8OS | 1 | - | LOC102723870 | | - |
| intron-exon | LOC105370449 | 14 | + | ATP6V1G2-DDX39B | 6 | - |
| exon-exon | RTN3 | 11 | + | RTN3 | 11 | - |
| exon-exon | PEX16 | 11 | + | PEX16 | 11 | - |
| exon-exon | ALDH3A2 | 17 | + | ALDH3A2 | 17 | - |
| exon-exon | LOC101929709 | 8 | - | LOC112268015 | 8 | - |
| exon-intron | ATF7IP | 12 | + | ASAP3 | 1 | - |
| exon-intron | GLUL | 1 | - | AC244205.1 | 2 | - |
| exon-exon | BMS1P20 | 22 | + | CUEDC1 | 17 | - |
| exon-exon | IGLV1-47 | 22 | - | RCSD1 | 1 | + |
| intron-exon | AC013463.2 | 2 | + | SCN3A | 2 | + |
| exon-exon | NOL11 | 17 | + | REL | | + |
| exon-exon | IL1B | 2 | + | TXN | 9 | + |
| exon-exon | TXN | 9 | - | IL1B | 2 | - |
| intron-exon | HIVEP2 | 6 | - | NARS1 | 18 | - |
| intron-exon | AC084855.1 | 15 | + | ADAMTS17 | 15 | + |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-intron | LOC107985056 | 17 | + | LOC100420851 | 17 | + |
| exon-exon | RPS15P2 | 1 | + | COA6 | 1 | + |
| intron-exon | BACE2 | 21 | + | PSG3 | 19 | + |
| exon-exon | HNRNPU | 1 | + | LPCAT3 | 12 | - |
| exon-exon | HNRNPU | 1 | + | LPCAT3 | 12 | - |
| exon-exon | UBB | 17 | - | UBB | 17 | + |
| intron-exon | PHRF1 | 11 | + | SRSF3 | 6 | + |
| exon-intron | TGFBI | 5 | - | SH3PXD2A | 10 | - |
| exon-exon | GPR107 | 9 | - | GPR107 | 9 | + |
| intron-exon | RYBP | 3 | - | CNDP2 | 18 | + |
| intron-exon | INTS9 | 8 | - | ZNF395 | 8 | - |
| exon-intron | BCAM | 19 | - | LOC105375567 | 7 | - |
| intron-exon | GPSM2 | 1 | - | ITGA5 | 12 | - |
| exon-exon | RPLP2 | 11 | - | HBB | 11 | - |
| intron-exon | AL049870.2 | 14 | + | KLHL28 | 14 | + |
| intron-exon | MLLT10 | 10 | - | NPAS2 | 2 | - |
| intron-exon | COL4A2-AS1 | 13 | - | COL4A1 | 13 | - |
| exon-intron | RPL28 | 19 | + | ACKR2 | | + |
| exon-exon | CPLANE1 | 5 | + | RPN2 | 20 | + |
| intron-exon | ZNF124 | 1 | - | PSG4 | 19 | - |
| exon-exon | ATRN | 20 | - | GIGYF2 | 2 | + |
| exon-exon | BSDC1 | 1 | - | UBE2O | 17 | + |
| exon-exon | VWF | 12 | + | FCGR3A | 1 | + |
| exon-exon | LZTS3 | 20 | - | TPP1 | 11 | + |
| intron-exon | PTPN23 | 3 | - | FLT4 | 5 | + |
| intron-exon | MAST4 | 5 | + | CSH2 | 17 | + |
| intron-exon | HCRTR1 | 1 | + | CYB5R1 | 1 | - |
| exon-exon | LOC107985532 | 17 | - | CSH1 | 17 | + |
| exon-intron | PSG2 | 19 | + | DHX15 | | + |
| exon-exon | MIR205HG | 1 | - | PAPPA | 9 | + |
| exon-exon | SDC1 | 2 | + | PRRC2B | 9 | + |
| exon-intron | SORBS1 | 10 | - | IMMP2L | 7 | - |
| exon-exon | PSG7 | 19 | - | FNDC3B | 3 | + |
| exon-exon | UBR5 | 8 | + | BAZ2A | 12 | + |
| intron-exon | LOXL2 | 8 | - | MAP4 | 3 | + |
| exon-exon | TMEM59 | 1 | - | CLN8 | 8 | + |
| exon-exon | SPTAN1 | 9 | - | GPS1 | 17 | + |
| exon-exon | ALPP | 2 | - | PTPRU | 1 | - |
| exon-exon | UBA52 | 19 | + | CSH1 | 17 | + |
| exon-intron | PAPPA | 9 | - | MEIS2 | 15 | - |
| exon-exon | HEG1 | 3 | - | SLC39A1 | 1 | - |
| exon-exon | AP2A2 | 11 | - | ACVRL1 | 12 | + |
| exon-exon | TLE3 | 15 | - | CSH1 | 17 | - |
| exon-exon | ANO1 | 11 | - | TMEM184B | 22 | + |
| exon-exon | TFE3 | X | + | CYP11A1 | 15 | + |
| exon-intron | CSH2 | 17 | - | FTSJ3 | 17 | - |
| exon-exon | DNAJB9 | 7 | - | TPP1 | 11 | + |
| exon-exon | CTSD | 11 | - | PRRC2C | 1 | - |
| exon-exon | FN1 | 2 | - | CSH2 | 17 | - |
| exon-exon | LOC107987135 | 9 | - | CSH2 | 17 | - |
| exon-exon | GPC3 | X | - | EEF1A1 | 6 | + |
| exon-exon | FBLN1 | 22 | + | RBMX | X | + |
| exon-intron | HUWE1 | X | - | SYN3 | 22 | - |
| exon-exon | SPTAN1 | 9 | + | MEST | 7 | + |
| exon-exon | MAN1A2 | 1 | - | ZYX | 7 | - |
| intron-exon | STK17B | 2 | - | SLC4A2 | 7 | - |
| exon-exon | PLAC4 | 21 | - | ADAM12 | 10 | + |
| intron-exon | LOC107986768 | 7 | - | CSH1 | 17 | - |
| exon-exon | MAP7 | 6 | + | MAP7 | 6 | - |
| exon-intron | IDS | X | - | LOC100630923 | 7 | - |
| intron-exon | RTTN | 18 | + | CSH1 | 17 | - |
| exon-exon | CGA | 6 | + | PRG2 | 11 | - |
| exon-intron | BHLHE41 | 12 | + | LOC105371956 | | + |
| exon-intron | INS-IGF2 | 11 | + | ERV3-1-ZNF117 | | + |
| exon-intron | CBY1 | 22 | - | ANO10 | 3 | + |
| exon-exon | SERPING1 | 11 | + | ILF3 | 19 | + |
| exon-exon | UROD | 1 | - | UROD | 1 | + |
| exon-exon | TIMP2 | 17 | + | FLT4 | 5 | + |
| intron-exon | AC004784.1 | 19 | + | COLEC12 | 18 | - |
| exon-exon | LTBP3 | 11 | - | LTBP3 | 11 | + |
| exon-exon | TASOR | 3 | - | ADGRE2 | 19 | - |
| exon-exon | CDC42BPA | 1 | - | SGK1 | 6 | - |
| exon-exon | OSBPL3 | 7 | - | FOXA1 | 14 | - |
| exon-intron | USP43 | 17 | - | CFAP52 | | - |
| exon-exon | CHAC1 | 15 | + | C16orf72 | 16 | + |
| exon-exon | IFI30 | 19 | + | IFITM3 | 11 | - |
| exon-exon | IFI30 | 19 | + | IFITM3 | 11 | - |
| exon-exon | UBA6 | 4 | - | UBA6 | 4 | + |
| exon-exon | PDK3 | X | - | PDK3 | X | + |
| exon-exon | SERPINF1 | 17 | - | SERPINF1 | 17 | + |
| exon-exon | SNHG29 | 17 | + | COL1A2 | 7 | + |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | CMSS1 | 3 | + | ZNF529 | 19 | - |
| exon-exon | DAP3 | 1 | + | RPS18 | 6 | + |
| intron-exon | MIGA1 | 1 | + | ALDOA | 16 | + |
| exon-exon | SRRM1 | 1 | - | SRRM1 | 1 | + |
| exon-exon | RPS9 | 19 | - | RPS9 | 19 | + |
| exon-exon | LTBP2 | 14 | + | LTBP2 | 14 | - |
| exon-exon | SNORD140 | 22 | + | COL8A2 | 1 | - |
| exon-intron | BABAM1 | 19 | + | PPP1R12B | 1 | - |
| exon-exon | RPL6 | 12 | + | RPL6 | 12 | - |
| exon-intron | VPS33B | 15 | - | VPS33B-DT | 15 | - |
| exon-exon | LOC101927496 | 12 | - | LDHB | 12 | - |
| intron-exon | ST3GAL2 | 16 | + | MTSS2 | 16 | + |
| exon-intron | CRK | 17 | + | PI4KAP2 | 22 | - |
| intron-exon | LOC105371217 | 17 | + | ACTG1 | 17 | - |
| exon-intron | UBB | 17 | - | AFF3 | 2 | + |
| intron-exon | ELMO1 | 7 | - | GAS2L3 | 12 | + |
| exon-intron | GRIFIN | 7 | + | GTF2IP1 | 7 | - |
| exon-exon | LOC107983996 | 17 | - | LOC105371856 | 17 | - |
| exon-exon | KRT86 | 12 | - | KRT86 | 12 | + |
| exon-intron | CRY1 | 12 | + | AC078929.1 | 12 | + |
| intron-exon | SNX14 | 6 | - | COL3A1 | 2 | + |
| intron-exon | TTC28 | 22 | - | EHBP1 | 2 | - |
| exon-intron | EHBP1 | 2 | + | TTC28-AS1 | 22 | + |
| exon-exon | LINC00880 | 3 | + | LINC02029 | 3 | + |
| intron-exon | ENG | 9 | - | FAM120AOS | 9 | - |
| exon-intron | IFNAR1 | 21 | - | DLG1 | 3 | + |
| intron-exon | PPIL6 | 6 | - | SNHG14 | 15 | - |
| exon-exon | SNX27 | 1 | + | NR2F6 | 19 | - |
| exon-intron | GOLGA2P9 | 19 | + | AC011467.4 | | + |
| intron-exon | AC078882.1 | 2 | - | LRP1B | 2 | - |
| intron-exon | RNA28SP | 21 | + | CS | 12 | - |
| intron-exon | AC094108.1 | 5 | - | SLCO6A1 | 5 | - |
| exon-exon | ADCY2 | 5 | - | SPACA3 | 17 | - |
| intron-exon | AL358215.2 | 1 | - | LOC105378898 | | - |
| intron-exon | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | + | LOC101929240 | 17 | + |
| exon-exon | EAF1 | 3 | - | METTL6 | | - |
| intron-exon | LINC01020 | 5 | - | LOC105374630 | 5 | - |
| intron-exon | MACROD2 | 20 | + | MACROD2 | 20 | - |
| intron-exon | BANP | 16 | - | LOC105378179 | 14 | + |
| exon-exon | ISLR | 15 | + | RPS3 | 11 | + |
| exon-exon | GRSF1 | 4 | + | PTMA | 2 | + |
| exon-exon | VPS29 | 12 | + | VPS29 | 12 | - |
| exon-exon | NAALADL1 | 11 | - | SAC3D1 | 11 | - |
| exon-exon | CRIP2 | 14 | - | KIF20B | 10 | + |
| exon-exon | EIF3C | 16 | - | SLC25A1 | 22 | + |
| exon-exon | H4C5 | 6 | + | FAM171A1 | 10 | - |
| exon-exon | UBE2M | 19 | + | HSF1 | 8 | - |
| exon-exon | LOC105378565 | 10 | + | LOC105378566 | 10 | + |
| intron-exon | USP46 | 4 | + | USP46-DT | 4 | + |
| exon-exon | INS-IGF2 | 11 | - | CREBBP | 16 | - |
| exon-exon | LOC105370502 | 14 | + | LOC112268134 | 14 | + |
| exon-exon | PPP1R35 | 7 | + | PPP1R35-AS1 | 7 | + |
| exon-exon | CDKL3 | 5 | + | UBE2B | 5 | + |
| exon-exon | WFDC2 | 20 | - | WFDC2 | 20 | + |
| exon-exon | BEND7 | 10 | + | LOC105376421 | 10 | + |
| exon-exon | CCDC66 | 3 | + | NDUFB5 | 3 | + |
| exon-exon | CRTAP | 3 | + | PPP2R5C | 14 | + |
| exon-exon | MGAT1 | 5 | + | MGAT1 | 5 | - |
| exon-exon | FRG1BP | 20 | + | LSM8 | 7 | + |
| intron-exon | TAFA1 | 3 | + | LYST | 1 | - |
| exon-intron | LOC105370911 | 15 | - | AC090607.3 | 15 | - |
| exon-exon | LINC02509 | 4 | - | TUBB6 | 18 | + |
| exon-intron | RAI14 | 5 | - | LOC105371198 | 16 | + |
| intron-exon | AC243829.4 | 17 | + | LOC102724850 | 17 | + |
| exon-exon | COL1A2 | 7 | + | SACS | 13 | - |
| exon-exon | TCL1A | 14 | + | TCL1A | 14 | - |
| exon-exon | SNTB2 | 16 | + | LRRFIP1 | 2 | + |
| exon-exon | GADD45GIP1 | 19 | - | RAD23A | 19 | - |
| exon-intron | MYH3 | 17 | - | MYH13 | | - |
| intron-exon | AKR1C2 | 10 | - | AKR1C1 | 10 | - |
| exon-exon | USP34 | 2 | - | HERPUD1 | 16 | + |
| exon-intron | YLPM1 | 14 | + | YLPM1 | 14 | - |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | CYP4F29P | 21 | - | CYP4F29P | 21 | + |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | ATP6V0B | 1 | + | ATP6V0B | 1 | - |
| exon-exon | TMEM223 | 11 | - | TMEM179B | 11 | - |
| intron-exon | RP5-936J12.1 | 1 | - | LOC112268286 | 1 | - |
| exon-exon | RPS2 | 16 | + | RPS2P55 | | - |
| exon-exon | AIMP1 | 4 | - | CALM1 | 14 | + |
| exon-exon | TRIM14 | 9 | - | LRRC41 | 1 | + |
| exon-exon | RBMS1 | 2 | - | APC | 5 | + |
| exon-exon | PLCG2 | 16 | + | CYREN | 7 | - |
| exon-exon | TNNC2 | 20 | - | PRMT2 | 21 | + |
| exon-intron | MDC1 | 6 | - | SOD2 | 6 | - |
| exon-intron | CHST7 | x | - | LOC112268284 | 21 | - |
| exon-exon | CMTM3 | 16 | + | UBE2J2 | 1 | - |
| exon-intron | HDAC10 | 22 | + | SNRNP70 | 19 | - |
| exon-exon | GSTP1 | 11 | + | SAT1 | X | + |
| exon-exon | AFF3 | 2 | - | CDH3 | 16 | + |
| exon-exon | UQCRC2 | 16 | + | LGALS1 | 22 | + |
| exon-exon | SERINC1 | 6 | - | PALLD | 4 | + |
| exon-exon | SPARC | 5 | + | NPLOC4 | 17 | + |
| intron-exon | LINC01031 | 17 | + | POLR2A | 17 | - |
| intron-exon | CLIC5 | 6 | - | XG | X | - |
| exon-exon | SPEN | 1 | - | SPEN | 1 | + |
| intron-exon | CCNY | 10 | + | SSR3 | 3 | - |
| exon-exon | TRAJ34 | 14 | + | TRAC | 14 | + |
| exon-exon | MRPL14 | 6 | + | MRPL14 | 6 | - |
| intron-exon | RPSAP71 | | + | CD24 | 6 | - |
| exon-intron | NOC2L | 1 | - | SAMD11 | | - |
| exon-exon | THAP11 | | + | RNA45SN3 | 21 | + |
| exon-exon | SERPING1 | 11 | + | ND2 | MT | + |
| exon-exon | PRDX1 | 1 | - | PRDX1 | 1 | + |
| intron-exon | LOC105379243 | 8 | - | NEIL2 | 8 | - |
| exon-exon | EBNA1BP2 | 1 | - | FAM183A | | - |
| intron-exon | LINC01890 | | + | LINC01888 | | + |
| intron-exon | AC079907.1 | | + | NUP37 | 12 | + |
| intron-exon | LOC728715 | | + | LOC105369647 | 12 | + |
| intron-exon | AL008633.1 | | + | LOC100128268 | | + |
| exon-exon | CD81 | 11 | + | ATP5IF1 | 1 | + |
| exon-exon | TUT7 | | + | LOC102723413 | | - |
| exon-exon | LOC105372647 | | + | CCDC185 | | + |
| exon-exon | TASOR2 | | + | NAA50 | 3 | + |
| exon-intron | AMPD3 | 11 | + | TRIP11 | | + |
| exon-exon | GPR108 | 19 | - | PDE4A | 19 | + |
| intron-exon | C22orf23 | 22 | - | MICALL1 | 22 | - |
| exon-exon | MRPL14 | 6 | + | MRPL14 | 6 | - |
| exon-exon | RPL3 | 22 | + | RPL3 | 22 | - |
| exon-exon | KDM5C | X | + | PTPMT1 | 11 | + |
| intron-exon | SYT2 | 1 | - | PPP2R2A | 8 | - |
| intron-exon | IRAG1 | 11 | - | IRAG1-AS1 | 11 | - |
| intron-exon | STAG2 | X | + | ZIK1P1 | X | + |
| exon-intron | EXD1 | 15 | + | TMEM168 | 7 | + |
| exon-intron | LOC105370787 | 15 | + | LOC102724219 | 21 | + |
| intron-exon | ATRNL1 | | + | COL1A1 | 17 | + |
| intron-exon | PRRG2 | | - | NOSIP | | - |
| exon-exon | YEATS2 | 3 | - | TRIM68 | 11 | + |
| exon-exon | ATP5MC1 | 17 | + | EIF4E2 | 2 | + |
| intron-exon | AL157834.1 | | + | LOC107984257 | 10 | + |
| exon-exon | CGA | 6 | + | CGA | 6 | - |
| exon-exon | CPSF6 | 12 | - | CPSF6 | 12 | + |
| intron-exon | AGPS | 2 | - | TTC30B | | - |
| intron-exon | EVL | 14 | + | PPHLN1 | 12 | + |
| intron-exon | PRUNE2 | 9 | + | LOC107987206 | 14 | + |
| exon-exon | FLRT2 | 14 | + | HOMER2 | 15 | - |
| exon-exon | LOC729867 | 1 | + | DCAF8 | 1 | + |
| exon-intron | SMC5 | 9 | + | TRPM3 | 9 | + |
| exon-intron | TIMM13 | 19 | + | LOC106804547 | 19 | + |
| exon-exon | LINC02761 | 11 | - | LOC112268079 | 11 | - |
| exon-exon | EID1 | 15 | + | SEPHS1 | 10 | - |
| exon-intron | SLC35F5 | 2 | - | AC017074.1 | 2 | - |
| exon-exon | RNA45SN3 | 21 | + | ENG | 9 | - |
| exon-exon | ZNF608 | 5 | + | REEP3 | 10 | - |
| exon-exon | CST3 | 20 | + | VPS13D | 1 | - |
| intron-exon | DLGAP4-AS1 | 20 | - | DLGAP4 | 20 | - |
| exon-exon | RPL13P12 | 17 | + | TSPAN3 | 15 | + |
| exon-exon | RPL11 | 1 | - | KDM5C | X | + |
| exon-exon | APOA1 | 11 | + | APOA1-AS | 11 | + |
| exon-exon | PTPRD | 9 | - | RTL8A | X | - |
| exon-exon | LOC101928721 | | - | NSUN7 | | - |
| exon-exon | LINC01695 | 21 | + | SEC24D | 4 | + |
| intron-exon | AC011471.4 | | + | ZNF738 | 19 | - |
| intron-exon | RNA28SP | 21 | + | DIPK1B | 9 | + |
| exon-exon | RNA45SN1 | 21 | + | ADAM19 | 5 | - |
| intron-exon | NEDD4 | 15 | - | ARMCX3 | X | + |
| intron-exon | RPLP0 | 12 | - | RBM3 | X | + |
| exon-exon | SLITRK2 | X | + | SLITRK2 | X | - |
| exon-exon | PFDN6 | 6 | - | UHRF2 | 9 | - |
| exon-intron | TRPC4AP | 20 | + | LOC100506578 | | - |
| exon-exon | LINC02455 | | - | NINJ2 | | - |
| intron-exon | AP001021.3 | | + | CYRIA | 2 | - |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| exon-exon | HDLBP | 2 | - | RPS14 | 5 | - |
| exon-exon | CIAO1 | 2 | - | CLCN2 | 3 | + |
| exon-exon | MEGF11 | 15 | + | FKBP10 | 17 | + |
| intron-exon | ANKRD12 | 18 | + | TWSG1 | | + |
| intron-exon | VPS33A | | - | LOC171391 | | - |
| exon-exon | NET1 | 10 | + | ATRN | 20 | + |
| intron-exon | LOC105372544 | | + | HID1 | 17 | - |
| exon-intron | ZKSCAN1 | 7 | + | NF1 | 17 | + |
| exon-exon | ZBTB25 | 14 | - | ARMC8 | 3 | + |
| exon-exon | AP2S1 | 19 | + | EEF2 | 19 | + |
| exon-exon | LOC105373780 | | + | ZNF804A | | + |
| exon-exon | CEBPZ | 2 | - | NR2F1 | 5 | + |
| exon-intron | TLE5 | 19 | + | AEBP2 | 12 | - |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN1 | 21 | + |
| intron-exon | AC016590.1 | 19 | - | LOC284412 | 19 | - |
| exon-exon | PDGFRL | 8 | - | PDGFRL | 8 | + |
| exon-intron | ARMCX3 | X | + | CYYR1-AS1 | | - |
| exon-exon | GABARAP | 17 | - | GABARAP | 17 | + |
| exon-exon | C21orf91 | | + | ZW10 | | + |
| exon-intron | MIEN1 | 17 | + | HNRNPDL | 4 | + |
| exon-intron | FN1 | 2 | - | AL356010.2 | | + |
| intron-exon | LOC105375168 | 7 | + | SOSTDC1 | 7 | - |
| intron-exon | SMURF1 | 7 | + | KIF3A | 5 | - |
| exon-exon | ATP6 | MT | - | DCAF6 | 1 | - |
| exon-exon | SLFN5 | 17 | + | NF2 | 22 | + |
| exon-exon | SSPN | 12 | + | LOC105369705 | 12 | + |
| exon-exon | MALAT1 | 11 | + | BHLHE40 | 3 | + |
| intron-exon | CLTRN | X | + | CA5BP1-CA5B | X | + |
| intron-exon | IL6ST | 5 | + | LOC101928419 | | + |
| exon-intron | FAM86JP | 3 | + | ALG1L | | - |
| exon-intron | FTL | 19 | - | MRM3 | 17 | + |
| exon-exon | DCTN2 | 12 | - | MBD6 | 12 | - |
| exon-exon | GSN | 9 | - | FOXO3 | 6 | - |
| exon-exon | LOC102724776 | 4 | + | MAP9 | 4 | + |
| exon-exon | MDC1 | 6 | - | H19 | 11 | - |
| exon-intron | ATP6 | MT | - | MRPL23 | 11 | + |
| intron-exon | AHR | 7 | - | LOC101927609 | | - |
| exon-exon | SLCO5A1 | 8 | - | PRKCSH | 19 | + |
| exon-intron | RPL7L1 | 6 | - | ACTL6A | 3 | + |
| exon-exon | DCBLD2 | 3 | - | TXNRD3 | 3 | - |
| exon-exon | PRXL2A | 10 | + | EIF2S3 | X | + |
| exon-exon | ND2 | MT | - | PRKAB1 | | - |
| intron-exon | SRSF5 | 14 | + | YWHAZ | 8 | - |
| exon-exon | POFUT2 | | - | RPL21P28 | | - |
| exon-exon | TIA1 | 2 | - | COPS8 | 2 | + |
| intron-exon | IGH | 14 | + | IGHA2 | 14 | + |
| exon-exon | CDKL3 | 5 | + | UBE2B | 5 | + |
| exon-exon | RBM3 | X | - | SIKE1 | 1 | + |
| exon-exon | FOXO3 | 6 | + | SEPTIN1 | 16 | - |
| exon-exon | CYBC1 | 17 | + | ENTPD4 | 8 | + |
| exon-exon | PREB | 2 | - | PREB | 2 | + |
| intron-exon | NT5DC1 | 6 | - | FAM160B1 | 10 | - |
| intron-exon | SMIM36 | 17 | - | CNN1 | 19 | - |
| exon-intron | GTPBP3 | 19 | - | CSNK1A1 | 5 | + |
| exon-exon | PCSK7 | 11 | - | LRRC61 | 7 | - |
| exon-exon | NADSYN1 | 11 | + | NADSYN1 | 11 | - |
| exon-exon | NDUFB10 | 16 | + | NDUFB10 | 16 | - |
| exon-intron | LOC105377246 | 4 | - | LOC105377672 | | - |
| intron-exon | RANBP2 | 2 | + | MAN1A1 | 6 | - |
| exon-intron | EXOSC2 | 9 | - | FBXO27 | 19 | + |
| exon-exon | PCDHB13 | 5 | + | PCDHB13 | 5 | - |
| exon-intron | RHPN2 | 19 | + | CD2AP | 6 | - |
| exon-exon | COPA | 1 | - | COPA | 1 | + |
| exon-exon | LOC100653395 | 3 | - | GGCX | 2 | - |
| exon-intron | MEG3 | 14 | - | ACTR3-AS1 | | + |
| exon-exon | LTBP1 | | - | FKBP9 | 7 | - |
| exon-intron | SMU1 | 9 | - | DNAJC9-AS1 | 10 | - |
| exon-exon | LINC00476 | 9 | - | LOC112268049 | | - |
| exon-intron | TSNAX | 1 | + | TSNAX-DISC1 | 1 | + |
| intron-exon | LOC105373786 | | + | ND5 | MT | + |
| exon-exon | PM20D2 | 6 | - | ND3 | MT | + |
| exon-exon | RTKN | 2 | - | COX6B1 | 19 | + |
| intron-exon | MAP2K1 | 15 | + | PDK2 | 17 | + |
| exon-exon | RPS19 | 19 | - | PSMD11 | 17 | - |
| exon-exon | CNOT6L | 4 | - | AKT3 | 1 | - |
| exon-exon | DHCR24 | 1 | - | DHCR24 | 1 | + |
| exon-exon | SSH1 | 12 | - | SSH1 | 12 | + |
| exon-exon | DSC2 | 18 | - | DSC2 | 18 | + |
| exon-exon | UBE2M | 19 | + | HSF1 | 8 | - |
| exon-exon | LRRC59 | 17 | - | EME1 | 17 | - |
| intron-exon | PRPF40B | 12 | + | FMNL3 | 12 | - |
| exon-intron | TTC9C | | - | AP001458.2 | | - |
| exon-exon | PIK3C2B | 1 | + | ANKHD1-EIF4EBP3 | 5 | - |
| intron-exon | LOC102723313 | 8 | + | PINX1 | 8 | - |
| exon-exon | BEST1 | 11 | + | HERPUD1 | 16 | - |
| exon-exon | SPRY4 | 5 | - | GPRC5A | 12 | + |
| exon-exon | GAPDH | 12 | + | GAPDHP58 | | - |
| exon-exon | HNRNPU | 1 | - | HNRNPU | 1 | + |
| exon-exon | HNRNPA2B1 | 7 | - | HNRNPA2B1 | 7 | + |
| exon-exon | CYRIB | 8 | - | CYRIB | 8 | + |
| exon-exon | ATP6 | MT | + | ATP6 | MT | - |
| exon-exon | DYNC1LI1 | 3 | - | DYNC1LI1 | 3 | + |
| exon-exon | ATP5MC2 | 12 | - | ATP5MC2 | 12 | + |
| intron-exon | LIPI | 21 | - | LIPI | 21 | + |
| exon-exon | RBM39 | 20 | - | RBM39 | 20 | + |
| exon-exon | TMEM65 | 8 | - | TMEM65 | 8 | + |
| exon-exon | TAT-AS1 | 16 | + | MYRF | 11 | - |
| exon-exon | PCK1 | 20 | + | PCK1 | 20 | - |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN1 | 21 | - |
| exon-intron | LOC653513 | 1 | - | AC245297.3 | 1 | - |
| exon-exon | RBM11 | 21 | + | RBM11 | 21 | - |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | GJB1 | X | + | GJB1 | X | - |
| exon-exon | CLOCK | 4 | - | TMEM165 | 4 | + |
| exon-exon | TNFAIP6 | 2 | + | TNFAIP6 | 2 | - |
| exon-exon | COX7C | 5 | + | COX7C | 5 | - |
| intron-exon | ANKRD26 | 10 | - | WDR75 | 2 | + |
| exon-exon | BTBD9 | 6 | + | NHSL2 | X | - |
| exon-exon | TFCP2 | 12 | + | TFCP2 | 12 | - |
| intron-exon | LOC102723566 | | + | ASS1 | 9 | + |
| exon-exon | JTB | 1 | + | JTB | 1 | - |
| exon-exon | SLC18B1 | 6 | - | LARP6 | 15 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| exon-exon | KDM5C | X | + | PSMB7 | 9 | - |
| exon-exon | ZNF451 | 6 | - | ZNF451 | 6 | + |
| exon-exon | RPS2 | 16 | + | MED1 | 17 | - |
| exon-exon | USF3 | 3 | + | USF3 | 3 | - |
| intron-exon | RUFY2 | 10 | - | HNRNPH3 | 10 | + |
| intron-exon | CRACR2A | 12 | + | LOC107984495 | 12 | + |
| exon-exon | FAR2 | 12 | - | FAR2 | 12 | + |
| exon-exon | FTH1 | 11 | + | FTH1 | 11 | - |
| exon-exon | SF3A3 | 1 | - | TOX4 | 14 | + |
| exon-intron | SLC39A10 | 2 | - | MIA3 | 1 | - |
| intron-exon | GTF2IP13 | 7 | + | LOC112267911 | 7 | + |
| intron-exon | SLC35F2 | 11 | - | LOC101927837 | 16 | + |
| exon-exon | FGB | 4 | + | FGB | 4 | - |
| exon-intron | FMO5 | 1 | - | CHD1L | 1 | + |
| exon-exon | RPL10A | 6 | + | RPL10A | 6 | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | SH3BP4 | 2 | + | SH3BP4 | 2 | - |
| exon-exon | RPL10 | X | + | RPL10P16 | 19 | + |
| exon-intron | IGHGP | 14 | - | IGH | 14 | - |
| exon-exon | SP1 | 12 | - | GPATCH2L | 14 | - |
| exon-intron | ZNF43 | 19 | + | COL5A3 | | + |
| exon-exon | RASA4DP | 7 | - | RASA4 | 7 | - |
| exon-exon | PRRC2C | 1 | - | RGS5 | 1 | + |
| exon-exon | ANKS1A | 6 | - | MFAP4 | 17 | + |
| exon-intron | CD177 | | + | AC005392.3 | | + |
| exon-exon | CALM1 | 14 | + | APOBEC2 | 6 | + |
| exon-exon | IFI30 | 19 | - | SETX | 9 | + |
| exon-exon | NF1 | 17 | - | NF1 | 17 | + |
| exon-exon | MCAM | 11 | + | FN1 | 2 | + |
| exon-intron | MMADHC | 2 | - | ABTB2 | 11 | + |
| exon-exon | ASAH1 | 8 | - | ASAH1 | 8 | + |
| exon-exon | YBX3 | 12 | + | LOC112268284 | 21 | - |
| exon-intron | RAPGEF3 | 12 | - | LOC105369748 | 12 | + |
| exon-intron | IGHG1 | 14 | + | IGH | 14 | - |
| exon-exon | UBE2L6 | 11 | - | UBE2L6 | 11 | + |
| exon-exon | TAOK3 | 12 | - | TOB1 | 17 | - |
| exon-exon | KDM1A | 1 | + | KDM1A | 1 | - |
| exon-exon | FAHD2B | 2 | + | SELENOW | 19 | - |
| exon-exon | OXA1L | 14 | - | RPL27 | 17 | + |
| intron-exon | RILPL1 | 12 | + | PTGES | 9 | + |
| exon-intron | ACTA2-AS1 | 10 | + | RNA28SP | 21 | - |
| intron-exon | RPS4Y1 | Y | + | PLEKHA2 | 8 | - |
| exon-intron | H3P6 | 2 | + | H3P36 | | + |
| intron-exon | LEMD3 | 12 | + | ATP6 | MT | + |
| exon-exon | GPATCH8 | 17 | + | GPATCH8 | 17 | - |
| exon-intron | SETDB1 | 1 | - | MED25 | 19 | - |
| exon-exon | RPL32 | 3 | + | SERPINA9 | 14 | + |
| exon-intron | MCCC1 | 3 | + | PTPN14 | 1 | + |
| exon-intron | CSPP1 | 8 | + | PLPP1 | 5 | + |
| exon-exon | ELOVL7 | 5 | - | ELOVL7 | 5 | + |
| exon-exon | ACTG2 | 2 | + | ACTG2 | 2 | - |
| exon-exon | HLA-A | 6 | - | HLA-H | 6 | - |
| exon-intron | PLCD3 | 17 | + | SNRPF | 12 | - |
| exon-exon | MTM1 | X | + | MTM1 | X | - |
| exon-exon | TSKU | 11 | + | TSKU | 11 | - |
| exon-exon | SMYD2 | 1 | + | SMYD2 | 1 | - |
| exon-exon | LOC107987206 | 14 | + | LOC105378179 | 14 | + |
| exon-exon | MYL6 | 12 | - | MYL6B | 12 | - |
| exon-exon | PIAS1 | 15 | + | PIAS1 | 15 | - |
| exon-exon | SDCBP | 8 | + | SDCBP | 8 | - |
| intron-exon | DHRS1 | 14 | - | RABGGTA | 14 | - |
| exon-exon | ITPR3 | 6 | + | ITPR3 | 6 | - |
| exon-exon | RNA45SN3 | 21 | + | RPL14P1 | 12 | + |
| exon-exon | STAG2 | X | + | STAG2 | X | - |
| exon-exon | TAGLN | 11 | + | PCSK7 | 11 | - |
| exon-exon | PRKAR1A | 17 | + | FAM20A | 17 | - |
| exon-intron | REXO2 | 11 | - | SARM1 | 17 | - |
| exon-exon | EEF1A1P13 | 5 | - | EEF1A1 | 6 | + |
| exon-exon | ZNF106 | 15 | - | ZNF106 | 15 | + |
| exon-exon | EEF1A1P24 | 3 | + | EEF1A1 | 6 | + |
| exon-exon | USP48 | 1 | - | USP48 | 1 | + |
| exon-intron | NUDT15 | 13 | - | FLNB | 3 | - |
| intron-exon | FANCA | 16 | - | ZNF282 | 7 | - |
| exon-exon | CALU | 7 | + | CALU | 7 | - |
| exon-intron | DARS2 | 1 | + | GAS5-AS1 | 1 | + |
| exon-exon | EEF1A1P5 | 9 | + | EEF1A1 | 6 | + |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | PPP1CA | 11 | - | RAD9A | 11 | - |
| exon-intron | HECTD1 | 14 | + | LOC105370437 | 14 | + |
| exon-exon | EEF1A1P13 | 5 | - | EEF1A1P5 | 9 | - |
| exon-exon | TUFM | 16 | + | NRBP2 | 8 | + |
| intron-exon | METTL5 | 2 | - | SSB | 2 | - |
| exon-intron | NECTIN2 | 19 | - | RAD51B | 14 | - |
| exon-exon | ALDH1A1 | 9 | + | ALDH1A1 | 9 | - |
| exon-exon | SCAMP3 | 1 | + | SCAMP3 | 1 | - |
| exon-intron | GDI1 | X | - | RNA28SP | 21 | - |
| exon-exon | TMEM33 | 4 | + | TMEM33 | 4 | - |
| exon-intron | PPIA | 7 | - | CD38 | 4 | - |
| exon-intron | SYNRG | 17 | + | ZNF876P | 4 | - |
| exon-intron | IGKC | 2 | + | IGK | 2 | + |
| intron-exon | IGH | 14 | + | IGHG1 | 14 | + |
| exon-exon | STEAP2 | 7 | + | STEAP2 | 7 | - |
| exon-exon | SGK1 | 6 | - | SGK1 | 6 | + |
| exon-intron | SRC | 20 | + | SSH2 | 17 | + |
| exon-intron | CARHSP1 | 16 | - | LOC100130283 | 16 | + |
| exon-intron | ITM2C | 2 | - | OPA3 | 19 | + |
| exon-intron | FBXL19 | 16 | - | LIPE-AS1 | 19 | + |
| exon-exon | RPL13 | 16 | - | MAPKAPK3 | 3 | - |
| exon-exon | SENP3-EIF4A1 | 17 | - | YWHAE | 17 | + |
| exon-exon | PLPPR3 | 19 | - | PTBP1 | 19 | - |
| exon-exon | RAB6A | 11 | - | ACTA2 | 10 | - |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | TPM4 | 19 | + | TPM4 | 19 | - |
| intron-exon | SNX4 | 3 | + | CEACAM5 | 19 | - |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN3 | 21 | - |
| exon-intron | RNA45SN1 | 21 | + | RNR1 | MT | - |
| exon-exon | RPLP0 | 12 | - | RPLP0 | 12 | + |
| exon-exon | HMGN3 | 6 | - | HMGN3 | 6 | + |
| exon-exon | RAP1A | 1 | + | RAP1A | 1 | - |
| exon-exon | EEF1A1 | 6 | - | EEF1A1 | 6 | + |
| exon-exon | ATG4C | 1 | + | ATG4C | 1 | - |
| exon-exon | KTN1 | 14 | + | KTN1 | 14 | - |
| exon-intron | RPL17 | 18 | - | PIGK | 1 | - |
| exon-exon | SPARC | 5 | - | SPARC | 5 | + |
| intron-exon | LARP1B | 4 | - | EMC7 | 15 | + |
| exon-intron | IL1RN | 2 | - | PARP4 | 13 | + |
| exon-intron | RUSF1 | 16 | + | SLC5A2 | 16 | + |
| exon-intron | RPS23P8 | X | - | DIP2B | 12 | - |
| exon-exon | YIPF2 | 19 | - | HLA-H | 6 | - |
| exon-exon | ARF3 | 12 | - | ARF3 | 12 | + |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | PTPRF | 1 | + | PTPRF | 1 | - |
| exon-intron | REXO2 | 11 | - | SARM1 | 17 | - |
| exon-exon | FAM166A | 9 | - | TUBB4B | 9 | - |
| exon-exon | IL20RA | 6 | + | ATP6V0E2 | 7 | - |
| exon-exon | RTN4IP1 | 6 | - | AEBP1 | 7 | - |
| exon-exon | SCAPER | 15 | - | SCAPER | 15 | + |
| exon-exon | OLA1 | 2 | + | RNA45SN1 | 21 | - |
| exon-intron | RTCA | 1 | - | RASSF8-AS1 | 12 | + |
| exon-exon | TSC22D1 | 13 | - | TSC22D1 | 13 | + |
| exon-exon | TRIM41 | 5 | - | TALAM1 | 11 | - |
| exon-exon | TACSTD2 | 1 | - | TACSTD2 | 1 | + |
| exon-exon | UPF1 | 19 | + | UPF1 | 19 | - |
| exon-exon | PPDPF | 20 | - | MYO1D | 17 | + |
| exon-exon | RARS2 | 6 | - | RARS2 | 6 | + |
| exon-intron | RPS16 | 19 | - | BIK | 22 | - |
| exon-exon | SDF2L1 | 22 | - | DUOX2 | 15 | + |
| exon-exon | DNAJC3 | 13 | + | DNAJC3 | 13 | - |
| exon-exon | TMED2 | 12 | + | TMED2 | 12 | - |
| exon-exon | RPS3A | 4 | + | RPS3A | 4 | - |
| exon-exon | SEMA4B | 15 | - | SEMA4B | 15 | + |
| intron-exon | AL162497.1 | 13 | - | RNA45SN1 | 21 | - |
| exon-intron | LOC107986029 | 3 | - | MUC20P1 | 3 | - |
| exon-exon | LOC105372401 | 19 | - | RAP2B | 3 | + |
| exon-exon | SPTBN1 | 2 | - | RNA45SN1 | 21 | - |
| exon-exon | PCIF1 | 20 | - | NEAT1 | 11 | - |
| exon-exon | LOC105372401 | 19 | - | RAP2B | 3 | + |
| exon-exon | RPS24 | 10 | - | CTNND1 | 11 | - |
| exon-intron | RPL36AP28 | 7 | - | HTR2C | X | - |
| exon-exon | RAB2A | 8 | - | MYH9 | 22 | + |
| exon-exon | CSNK1G3 | 5 | + | CSNK1G3 | 5 | - |
| intron-exon | NDE1 | 16 | + | NCOA6 | 20 | + |
| exon-intron | CDCP1 | 3 | + | CAMLG | 5 | - |
| exon-exon | AP4M1 | 7 | - | KIFAP3 | 1 | + |
| exon-exon | TRMT112 | 11 | - | ESRRA | 11 | - |
| exon-exon | MFSD14B | 9 | + | MFSD14B | 9 | - |
| exon-exon | COL12A1 | 6 | - | COL12A1 | 6 | + |
| exon-exon | RPL18 | 19 | + | RNA45SN1 | 21 | - |
| exon-exon | SCNM1 | 1 | - | RNA45SN2 | 21 | - |
| exon-exon | KLK3 | 19 | - | MRPL4 | 19 | - |
| exon-intron | GTF3C1 | 16 | + | ZNF532 | 18 | - |
| exon-exon | RPL31 | 2 | - | CALU | 7 | + |
| exon-exon | GDE1 | 16 | - | GDE1 | 16 | + |
| intron-exon | NNT | 5 | + | ERH | 14 | + |
| exon-intron | KCTD20 | 6 | - | LOC105373971 | 2 | - |
| exon-exon | SQSTM1 | 5 | - | PIGR | 1 | - |
| exon-exon | IVNS1ABP | 1 | + | CASTOR3 | 7 | - |
| exon-exon | RPL14 | 3 | - | S100A16 | 1 | + |
| intron-exon | LOC112268284 | 21 | - | RNA45SN3 | 21 | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | EMP2 | 16 | - | EMP2 | 16 | + |
| exon-intron | CYB5D1 | 17 | + | NAA38 | 17 | - |
| intron-exon | LOC112268284 | 21 | - | RNA45SN3 | 21 | - |
| exon-exon | RPS6 | 9 | + | NPAS2 | 2 | + |
| exon-exon | FLJ32255 | 5 | + | LOC105374746 | 5 | + |
| intron-exon | TMED8 | 14 | - | GSTZ1 | 14 | - |
| exon-intron | CSTB | 21 | + | EXT2 | 11 | - |
| intron-exon | LOC105369332 | 11 | + | DOT1L | 19 | + |
| exon-exon | ND4 | MT | - | RNA45SN2 | 21 | - |
| intron-exon | PARP4 | 13 | + | MCF2L2 | 3 | - |
| exon-exon | PRPF40B | 12 | + | REPS1 | 6 | + |
| exon-exon | PDAP1 | 7 | - | ARPC1B | 7 | - |
| exon-exon | ZNF652 | 17 | - | ZNF652 | 17 | + |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | ADGRG1 | 16 | + | ADGRG1 | 16 | - |
| exon-intron | RPL9P18 | 6 | - | UBE2Q2P2 | 15 | + |
| exon-exon | PIGU | 20 | - | PIGU | 20 | + |
| exon-exon | LMNA | 1 | + | LMNA | 1 | - |
| exon-exon | TTLL3 | 3 | + | TTLL3 | 3 | - |
| exon-exon | RNVU1-18 | 1 | + | RN7SK | 6 | + |
| exon-intron | TSPYL1 | 6 | - | DSE | 6 | + |
| intron-exon | TTTY14 | Y | + | CD24 | 6 | - |
| exon-exon | NR4A1 | 12 | + | NR4A1 | 12 | - |
| exon-intron | UBE2D3 | 4 | - | LOC102723704 | 4 | + |
| exon-exon | VCP | 9 | - | VCP | 9 | + |
| exon-exon | YIF1B | 19 | - | YIF1B | 19 | + |
| exon-exon | GANAB | 11 | - | GANAB | 11 | + |
| exon-exon | SOS1 | 2 | - | SOS1 | 2 | + |
| exon-exon | DCLRE1C | 10 | + | DCLRE1C | 10 | - |
| exon-exon | SLC13A3 | 20 | - | SLC13A3 | 20 | + |
| intron-exon | DIO2-AS1 | 14 | - | LOC105379005 | 5 | + |
| exon-exon | MSL1 | 17 | + | MSL1 | 17 | - |
| exon-exon | RBM26 | 13 | - | RBM26 | 13 | + |
| exon-exon | FBXL2 | 3 | + | FBXL2 | 3 | - |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | PEBP1 | 12 | + | PEBP1 | 12 | - |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | SEH1L | 18 | + | SEH1L | 18 | - |
| exon-exon | XPO1 | 2 | - | XPO1 | 2 | + |
| intron-exon | RYR2 | 1 | + | POLR1B | 2 | - |
| exon-exon | DYNC1H1 | 14 | - | UBR4 | 1 | + |
| exon-intron | SERINC1 | 6 | + | G3BP1 | 5 | - |
| exon-exon | PPIA | 7 | - | RNA45SN3 | 21 | + |
| exon-intron | NEAT1 | 11 | - | UNC13B | 9 | - |
| exon-exon | CYTB | MT | - | RNA45SN2 | 21 | - |
| exon-exon | FAIM2 | 12 | - | FAIM2 | 12 | + |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | ENG | 9 | - | EMILIN1 | 2 | + |
| exon-exon | FOCAD | 9 | - | RPS2 | 16 | - |
| intron-exon | GGT1 | 22 | + | RNA45SN2 | 21 | - |
| exon-exon | RRBP1 | 20 | + | RNA45SN1 | 21 | - |
| exon-intron | FILIP1L | 3 | - | CMSS1 | 3 | + |
| exon-intron | TAF15 | 17 | + | DIAPH2 | X | + |
| exon-exon | CAVIN3 | 11 | + | LOC101927825 | 11 | + |
| exon-exon | PDLIM5 | 4 | + | PDLIM5 | 4 | - |
| exon-exon | OSR2 | 8 | - | GOLIM4 | 3 | + |
| intron-exon | RPL31P35 | 7 | - | UBE2D3 | 4 | + |
| exon-exon | TMEM59 | 1 | - | TMEM59 | 1 | + |
| exon-exon | SLC39A13 | 11 | - | SLC39A13 | 11 | + |
| exon-exon | RERE | 1 | - | RERE | 1 | + |
| intron-exon | SLC35F1 | 6 | - | RPL29 | 3 | - |
| exon-intron | RPL9P8 | 15 | - | UBE2Q2P2 | 15 | + |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | CYP20A1 | 2 | + | CYP20A1 | 2 | - |
| exon-exon | SRSF10 | 1 | - | SRSF10 | 1 | + |
| exon-intron | CAPN12 | 19 | - | LOC107985291 | 19 | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN2 | 21 | - |
| exon-intron | LAMA4 | 6 | + | LAMA4-AS1 | 6 | + |
| intron-exon | SUCO | 1 | - | GLRX2 | 1 | + |
| exon-intron | ZNF33A | 10 | - | DEXI | 16 | - |
| exon-exon | RANBP3 | 19 | + | CCNG2 | 4 | - |
| exon-exon | BSG | 19 | + | BSG | 19 | - |
| exon-exon | ATP5MC2 | 12 | + | MRPS25 | 3 | + |
| exon-exon | RPS7P1 | 17 | + | RPS7 | 2 | - |
| exon-exon | SDCBP | 8 | + | SDCBP | 8 | - |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | EPS15 | 1 | - | EPS15 | 1 | + |
| exon-exon | TUBA1B | 12 | - | TUBA1B | 12 | + |
| intron-exon | MORC4 | X | - | MORC4 | X | + |
| exon-exon | ZNF121 | 19 | - | ZNF121 | 19 | + |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN2 | 21 | - |
| exon-intron | TOR1AIP2 | 1 | + | IL4I1 | 19 | + |
| exon-exon | COX6B1 | 19 | - | SORL1 | 11 | - |
| exon-exon | TFF1 | 21 | + | EEF1G | 11 | - |
| exon-exon | UQCRB | 8 | + | UNG | 12 | - |
| exon-exon | ITLN1 | 1 | + | ACSL5 | 10 | + |
| intron-exon | IGH | 14 | + | IGHA2 | 14 | + |
| intron-exon | AC092574.2 | 4 | - | ZNF718 | 4 | - |
| exon-exon | ND1 | MT | - | COX1 | MT | - |
| exon-exon | ND1 | MT | - | RNA45SN2 | 21 | - |
| exon-intron | TMEM184C | 4 | + | RNR2 | MT | - |
| exon-intron | ZNF331 | 19 | - | MGST1 | 12 | - |
| exon-exon | COX3 | MT | - | ABR | 17 | - |
| exon-exon | SSR2 | 1 | + | AAK1 | 2 | + |
| exon-exon | LSM4 | 19 | + | ATP11A | 13 | - |
| exon-exon | KRT18 | 12 | - | HSD17B2 | 16 | - |
| exon-exon | RECQL5 | 17 | - | RECQL5 | 17 | + |
| exon-exon | MALAT1 | 11 | + | TALAM1 | 11 | - |
| exon-intron | RNA45SN2 | 21 | + | LOC112268284 | 21 | - |
| exon-exon | ENTPD6 | 20 | + | ENTPD6 | 20 | - |
| exon-exon | S100A16 | 1 | - | S100A16 | 1 | + |
| exon-exon | NEO1 | 15 | + | NEO1 | 15 | - |
| exon-exon | GDI2 | 10 | - | TASOR2 | 10 | + |
| exon-exon | LOC107987206 | 14 | + | LOC105378179 | 14 | + |
| exon-exon | PITPNA | 17 | - | PITPNA-AS1 | 17 | + |
| exon-exon | RPL3P4 | 14 | - | RPL3P4 | 14 | + |
| exon-exon | EXOC4 | 7 | + | EXOC4 | 7 | - |
| exon-exon | TALAM1 | 11 | - | MALAT1 | 11 | + |
| exon-intron | ZNF772 | 19 | + | AC003005.2 | 19 | + |
| intron-exon | TRIM16 | 17 | + | NCOR1 | 17 | + |
| exon-exon | TGFB3 | 14 | - | TGFB3 | 14 | + |
| exon-exon | ANXA2 | 15 | + | GSTM3 | 1 | + |
| exon-exon | DDX17 | 22 | - | DDX17 | 22 | + |
| exon-exon | ADH5 | 4 | - | ADH5 | 4 | + |
| exon-exon | LTBP4 | 19 | + | LTBP4 | 19 | - |
| exon-exon | ATAD2B | 2 | + | ATG2B | 14 | + |
| intron-exon | STPG4 | 2 | - | RPL7P1 | 5 | + |
| intron-exon | ATP5MF-PTCD1 | 7 | - | DHX33 | 17 | + |
| exon-exon | GLUL | 1 | + | GLUL | 1 | - |
| exon-exon | IGHV3-38 | 14 | - | IGHV3-23 | 14 | - |
| exon-intron | RPS29 | 14 | + | CDKAL1 | 6 | + |
| exon-intron | NADK2 | 5 | + | CMIP | 16 | - |
| exon-intron | TM4SF1 | 3 | + | MECOM | 3 | + |
| exon-exon | PSMA7 | 20 | + | UBA52 | 19 | + |
| exon-exon | ST20-MTHFS | 15 | + | RNA45SN2 | 21 | - |
| intron-exon | ALG1L8P | 11 | + | OSBPL7 | 17 | + |
| exon-exon | ECD | 10 | + | HSP90AB1 | 6 | - |
| exon-intron | EPRS1 | 1 | + | LOC112268284 | 21 | - |
| exon-exon | EFHD2 | 1 | - | SP3 | 2 | + |
| exon-intron | PHKG1 | 7 | - | TCF12 | 15 | - |
| exon-exon | NACA3P | 4 | - | HLA-B | 6 | + |
| exon-intron | PICK1 | 22 | - | PTPRH | 19 | + |
| exon-intron | CXADR | 21 | - | CFAP44 | 3 | + |
| exon-exon | RACK1 | 5 | + | RNA45SN1 | 21 | - |
| intron-exon | PLCG2 | 16 | - | ND2 | MT | + |
| exon-exon | ENTPD2 | 9 | + | C1S | 12 | - |
| intron-exon | STAG2 | X | - | MYEOV | 11 | - |
| exon-exon | ND2 | MT | - | CBX1 | 17 | + |
| exon-intron | CFLAR | 2 | - | LOC101928565 | 1 | + |
| exon-exon | PFDN1 | 5 | + | KRT6A | 12 | - |
| exon-exon | RPS27A | 2 | - | KRT14 | 17 | + |
| exon-intron | RBBP5 | 1 | + | NSUN5P1 | 7 | - |
| intron-exon | RIMS3 | 1 | + | NFYC | 1 | + |
| exon-intron | ND4 | MT | - | LOC101927947 | 4 | + |
| exon-exon | SEM1 | 7 | + | TOM1L1 | | + |
| exon-exon | RNA45SN3 | 21 | + | GID8 | | + |
| exon-exon | CXCL12 | 10 | + | RNA45SN3 | 21 | - |
| exon-intron | CXCL12 | 10 | + | RNA28SP | 21 | - |
| exon-exon | RPL18 | 19 | + | LOC112268284 | 21 | - |
| exon-exon | PTMS | 12 | - | MYH9 | 22 | + |
| exon-exon | BCL3 | 19 | - | RNA45SN3 | 21 | - |
| exon-intron | CEMIP2 | 9 | + | BHLHE40 | 3 | - |
| exon-intron | AMH | 19 | - | LOC108783649 | 19 | - |
| exon-intron | LOC105379005 | 5 | + | LOC101928858 | 5 | + |
| exon-exon | TSC22D1 | 13 | - | TSC22D1 | 13 | + |
| exon-exon | SERPINB6 | 6 | - | SERPINB6 | 6 | + |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | SYTL3 | 6 | + | SYTL3 | 6 | - |
| exon-exon | FAM66A | 8 | - | FAM66D | 8 | - |
| exon-exon | ND4 | MT | + | ND4 | MT | - |
| exon-exon | RPL13A | 19 | + | RPL13AP5 | 10 | - |
| exon-exon | MCC | 5 | - | MCC | 5 | + |
| exon-exon | ENC1 | 5 | - | ENC1 | 5 | + |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN3 | 21 | - |
| exon-exon | LILRB4 | 19 | - | IMPA2 | 18 | - |
| exon-exon | RNA45SN2 | 21 | + | PABPC1 | 8 | - |
| exon-exon | SLC25A29 | 14 | - | YY1 | 14 | - |
| exon-exon | LOC105373610 | 2 | + | COX2 | MT | + |
| intron-exon | DYRK1A | 21 | - | EIF3F | 11 | + |
| exon-exon | ZMAT2 | 5 | - | ACTG1 | 17 | - |
| exon-exon | NOC4L | 12 | - | NIBAN1 | 1 | - |
| exon-exon | PPP2CA | 5 | - | PPP2CA | 5 | + |
| exon-exon | PURA | 5 | - | NORAD | 20 | + |
| exon-exon | SMG7 | 1 | - | SMG7 | 1 | + |
| exon-intron | COL1A1 | 17 | + | UBE2W | 8 | + |
| intron-exon | LOC107984461 | 12 | - | PPFIBP1 | 12 | + |
| intron-exon | STAG3L1 | 7 | - | TRIM74 | 7 | + |
| exon-exon | NAALADL1 | 11 | - | SAC3D1 | 11 | - |
| exon-intron | GATAD2A | 19 | - | GATAD2A | 19 | + |
| exon-intron | LINC02273 | 4 | + | LINC02273 | 4 | - |
| exon-exon | CYBA | 16 | + | LOC105375945 | 9 | - |
| exon-intron | VAMP2 | 17 | + | FNDC3B | 3 | - |
| intron-exon | ANXA4 | 2 | + | ANXA4 | 2 | - |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | ZZEF1 | 17 | - | ZZEF1 | 17 | + |
| exon-exon | LPCAT2 | 16 | + | LPCAT2 | 16 | - |
| exon-intron | CMBL | 5 | + | MARCHF6 | 5 | + |
| exon-intron | GNB1 | 1 | + | FANK1 | 10 | - |
| exon-exon | HIVEP1 | 6 | + | HIVEP1 | 6 | - |
| exon-intron | SUZ12P1 | 17 | + | SUZ12P1 | 17 | - |
| exon-exon | NGRN | 15 | + | NGRN | 15 | - |
| exon-exon | NORAD | 20 | - | NORAD | 20 | + |
| exon-exon | JAM3 | 11 | + | JAM3 | 11 | - |
| intron-exon | ITFG2-AS1 | 12 | - | PMVK | 1 | + |
| exon-exon | DDX17 | 22 | - | DDX17 | 22 | + |
| exon-exon | ND4 | MT | + | ND4 | MT | - |
| exon-exon | LTBP3 | 11 | - | SCYL1 | 11 | - |
| exon-intron | ND1 | MT | - | KIAA1217 | 10 | - |
| intron-exon | IGH | 14 | + | IGHG1 | 14 | + |
| intron-exon | RPL13AP5 | 10 | - | DYNC1H1 | 14 | - |
| exon-exon | ND4 | MT | - | ND4 | MT | + |
| exon-exon | TRMT12 | | - | LOC728554 | 5 | + |
| exon-intron | LOC102723722 | | - | CYP2D6 | 22 | - |
| exon-intron | TRIM2 | 4 | - | CCDC192 | 5 | - |
| exon-intron | MRPL12 | 17 | - | AC139530.1 | 17 | - |
| intron-exon | EXOC3L2 | 19 | - | BLOC1S3 | 19 | - |
| intron-exon | AC117460.1 | 3 | + | LOC105373996 | 3 | + |
| intron-exon | LHX6 | 9 | - | MORN5 | 9 | - |
| exon-intron | AKR1C2 | 10 | + | LOC101928051 | 10 | + |
| exon-intron | RPL36AP9 | 1 | - | AC093151.3 | 1 | - |
| exon-intron | YEATS2 | 3 | - | CRADD | 12 | + |
| exon-exon | ND4 | MT | - | TALAM1 | 11 | - |
| exon-exon | RAB33B | 4 | + | RAB33B | 4 | - |
| intron-exon | TRND | MT | - | COX1 | MT | - |
| exon-exon | LCN2 | 9 | - | NAPRT | 8 | + |
| exon-exon | MGRN1 | 16 | - | RNA45SN2 | 21 | - |
| exon-intron | CTDSP2 | 12 | + | RNA28SP | 21 | - |
| exon-intron | ND4 | MT | - | LOC107985771 | 2 | - |
| exon-intron | ND1 | MT | - | PPFIA1 | 11 | - |
| exon-intron | TPMT | 6 | + | ZNF81 | X | - |
| exon-exon | MYBBP1A | 17 | - | SPNS2 | 17 | - |
| intron-exon | NR4A3 | 9 | + | NR4A3 | 9 | - |
| exon-intron | FUS | 16 | - | SRR | 17 | - |
| exon-intron | SS18 | 18 | + | AC092574.2 | 4 | + |
| exon-exon | COL1A1 | 17 | + | AEBP1 | 7 | - |
| exon-intron | HSD17B7 | 1 | - | TTC13 | 1 | + |
| exon-intron | PIGS | | + | GUSBP2 | | + |
| intron-exon | AC005699.1 | 4 | - | LOC107986178 | 4 | - |
| exon-intron | ND2 | MT | - | SOX6 | 11 | + |
| exon-intron | RAB27B | 18 | + | AC098848.1 | | + |
| exon-exon | GREB1 | | - | MSL3 | | - |
| exon-exon | COL1A1 | 17 | - | PEAK1 | 15 | - |
| exon-exon | NECAP1 | 12 | - | ETS1 | 11 | + |
| exon-intron | WAPL | 10 | + | TMCC1 | 3 | + |
| exon-exon | IGLV2-23 | 22 | + | IGLV2-18 | 22 | + |
| exon-exon | HOXB13 | 17 | + | ACTG2 | 2 | + |
| exon-exon | ANXA2 | 15 | + | MSRB1 | 16 | + |
| exon-exon | CCDC80 | 3 | - | SLC24A5 | 15 | + |
| exon-exon | SCAI | | - | GOLGA1 | | - |
| exon-exon | LINC01016 | 6 | + | COPE | 19 | + |
| exon-exon | PEX5 | 12 | - | ABCC6 | | + |
| exon-exon | NCBP2 | 3 | + | PEX5 | 12 | - |
| exon-exon | GNA13 | 17 | + | ADGRF3 | | + |
| exon-exon | CSNK1A1 | 5 | + | LOC105369783 | 12 | + |
| exon-exon | HNRNPA0 | 5 | + | HCFC2 | 12 | - |
| intron-exon | UFL1 | 6 | - | UFL1-AS1 | 6 | - |
| exon-exon | HDDC2 | 6 | + | RPS6KC1 | 1 | - |
| exon-intron | RPRD1B | 20 | - | ZMYM4 | 1 | + |
| exon-exon | LOC730098 | 9 | + | DENND2B | 11 | + |
| exon-intron | LOC105372942 | 22 | - | THADA | 2 | + |
| intron-exon | AUNIP | 1 | - | MTFR1L | 1 | - |
| intron-exon | CRYZL2P-SEC16B | 1 | + | RASAL2 | 1 | + |
| exon-exon | MEA1 | 6 | - | PPP2R5D | 6 | + |
| exon-exon | BID | 22 | + | COPG1 | 3 | - |
| exon-exon | SLC9A3R1 | 17 | - | TALAM1 | 11 | - |
| exon-exon | KRT18P19 | 2 | + | SMARCC1 | 3 | + |
| exon-exon | CRYAB | 11 | + | RNA45SN1 | 21 | - |
| exon-intron | CDAN1 | 15 | + | UBTD2 | 5 | + |
| exon-exon | KHSRP | 19 | + | IGFBP5 | 2 | + |
| intron-exon | TDRKH | 1 | - | OAZ3 | 1 | - |
| intron-exon | TGIF2-RAB5IF | 20 | - | SEC63 | 6 | - |
| exon-exon | SLC25A29 | 14 | - | YY1 | 14 | - |
| exon-intron | LOC105374224 | | + | AC068759.1 | | + |
| exon-exon | CITED4 | 1 | + | CCNK | 14 | - |
| exon-exon | SARS2 | 19 | - | SARS2 | 19 | + |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | DOC2A | 16 | - | INO80E | 16 | - |
| exon-exon | SERPINH1 | 11 | - | AP2M1 | 3 | - |
| exon-exon | ATP6 | MT | - | ARFGAP2 | 11 | - |
| exon-intron | KDELR2 | 7 | + | C16orf72 | 16 | - |
| exon-exon | RPL37A | 2 | - | KLHL12 | 1 | + |
| exon-exon | PPDPF | 20 | - | TMED7-TICAM2 | 5 | + |
| exon-exon | ND2 | MT | - | STK4 | 20 | + |
| exon-exon | JUP | 17 | - | JUP | 17 | + |
| exon-exon | PEX19 | 1 | - | PEX19 | 1 | + |
| exon-exon | PSAP | 10 | - | PSAP | 10 | + |
| exon-exon | IPO9 | 1 | + | IPO9 | 1 | - |
| exon-intron | ATP8A1 | 4 | + | HFM1 | 1 | + |
| exon-exon | SDC2 | 8 | + | SDC2 | 8 | - |
| exon-exon | VKORC1L1 | 7 | + | VKORC1L1 | 7 | - |
| intron-exon | IGH | 14 | + | IGHG1 | 14 | + |
| exon-exon | IGHG1 | 14 | + | IGHG3 | 14 | + |
| intron-exon | AL645608.4 | | - | LOC284600 | | - |
| exon-intron | DHX29 | 5 | - | AC026704.1 | | - |
| exon-intron | KARS1 | 16 | + | RAD51AP2 | | - |
| exon-intron | MYLK | 3 | - | MYLK-AS1 | 3 | + |
| exon-exon | FLOT1 | 6 | - | ZNF415 | 19 | - |
| exon-exon | LOC105370792 | 15 | + | EHD4 | 15 | + |
| exon-exon | GDI2 | 10 | - | GDI2 | 10 | + |
| exon-exon | ZNF302 | 19 | + | ZNF302 | 19 | - |
| exon-exon | UBE2R2 | 9 | + | UBE2R2 | 9 | - |
| exon-exon | HNRNPLL | 2 | - | HNRNPLL | 2 | + |
| exon-exon | KMT2C | 7 | - | KMT2C | 7 | + |
| exon-exon | SATB1 | 3 | - | SATB1 | 3 | + |
| exon-exon | STARD7 | 2 | + | CCDC97 | 19 | - |
| intron-exon | CELF2-AS1 | 10 | - | SPAG17 | 1 | - |
| exon-exon | ZNF214 | 11 | - | ZNF215 | 11 | - |
| intron-exon | ALDH1L1-AS1 | 3 | + | ALDH1L1 | 3 | + |
| exon-exon | PABPC1 | 8 | - | PABPC1 | 8 | + |
| exon-intron | APEH | 3 | + | APEH | 3 | - |
| exon-exon | RPL26P19 | 5 | - | RPL26 | 17 | + |
| exon-exon | DDX18 | 2 | + | DDX18 | 2 | - |
| exon-exon | CNN3 | 1 | - | CNN3 | 1 | + |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | EEF1A1P5 | 9 | + | EEF1A1P5 | 9 | - |
| exon-exon | RAB40B | 17 | - | RAB40B | 17 | + |
| exon-intron | CSRNP2 | 12 | - | LETMD1 | 12 | + |
| exon-exon | OSBPL9 | 1 | + | OSBPL9 | 1 | - |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | SSR4 | X | + | SSR4 | X | - |
| intron-exon | AC104248.1 | 8 | - | LOC101927413 | 8 | - |
| exon-exon | TMEM9 | 1 | - | TMEM9 | 1 | + |
| exon-intron | MED4 | 13 | + | STAT5A | 17 | - |
| exon-exon | ATP6V1G2-DDX39B | 6 | + | UBTD1 | 10 | - |
| intron-exon | NOS1AP | 1 | - | ATF6 | 1 | - |
| exon-intron | NUTM2A | 10 | + | LOC112268063 | 10 | - |
| exon-intron | NOLC1 | 10 | - | SHROOM3-AS1 | 4 | - |
| exon-exon | PRKCB | 16 | + | LEMD2 | 6 | - |
| exon-intron | ACTG1 | 17 | + | RNR1 | MT | - |
| exon-exon | METRNL | 17 | - | MIDN | 19 | - |
| exon-exon | LOC105372136 | | - | WDR7-OT1 | | - |
| intron-exon | SNX16 | 8 | + | HNRNPA1P4 | 8 | + |
| exon-exon | TBC1D9B | 5 | - | TBC1D9B | 5 | + |
| exon-intron | TRA2A | 7 | + | RNR2 | MT | + |
| exon-exon | GTPBP1 | 22 | - | TAF1D | 11 | - |
| exon-exon | TM2D1 | 1 | - | TM2D1 | 1 | + |
| exon-intron | TMSB10 | 2 | + | LOC105374836 | 2 | - |
| exon-exon | IGHG1 | 14 | - | IGHG1 | 14 | + |
| exon-exon | IGLC3 | 22 | - | IGLL5 | 22 | - |
| exon-exon | IGKC | 2 | - | IGKC | 2 | + |
| exon-exon | GNB1 | 1 | - | GNB1 | 1 | + |
| intron-exon | SREBF2 | 22 | + | CFL1 | 11 | - |
| intron-exon | SLC35F1 | 6 | - | RPL29 | 3 | - |
| intron-exon | BTBD7 | 14 | - | FARSB | 2 | - |
| exon-exon | RNA45SN2 | 21 | + | CRYAB | 11 | - |
| exon-exon | ISCA2 | 14 | + | ISCA2 | 14 | - |
| exon-exon | CMPK1 | 1 | + | CMPK1 | 1 | - |
| intron-exon | CYP4F12 | 19 | + | OR10H1 | 19 | + |
| exon-exon | ND1 | MT | + | ND1 | MT | - |
| exon-exon | CALM1 | 14 | + | CALM1 | 14 | - |
| exon-exon | DDX46 | 5 | - | DDX46 | 5 | + |
| exon-exon | LDHB | 12 | + | LDHB | 12 | - |
| exon-intron | PGP | 16 | + | AUTS2 | 7 | - |
| exon-intron | BLCAP | 20 | + | CTNNBL1 | 20 | + |
| exon-exon | CSTF2 | X | - | CSTF2 | X | + |
| exon-intron | TIMM10B | 11 | - | NCKAP1 | 2 | + |
| exon-exon | S100A11 | 1 | + | RNA45SN2 | 21 | - |
| intron-exon | IGH | 14 | + | IGHG3 | 14 | + |
| exon-intron | RRP7A | 22 | - | LOC101927372 | 22 | - |
| exon-exon | PGD | 1 | + | PGD | 1 | - |
| exon-intron | TAGLN | 11 | + | PCSK7 | 11 | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | C6orf62 | 6 | - | C6orf62 | 6 | + |
| intron-exon | COX3 | MT | - | ND4 | MT | - |
| exon-intron | FLNB | 3 | + | FLNB-AS1 | 3 | - |
| exon-exon | TBC1D2B | 15 | - | TBC1D2B | 15 | + |
| exon-exon | CCDC6 | 10 | - | CCDC6 | 10 | + |
| exon-exon | DHCR24 | 1 | - | DHCR24 | 1 | + |
| exon-exon | NOL11 | 17 | + | NOL11 | 17 | - |
| exon-exon | ORM1 | 9 | + | ORM1 | 9 | - |
| exon-exon | EDF1 | 9 | - | EDF1 | 9 | + |
| exon-exon | FAM91A1 | 8 | + | FAM91A1 | 8 | - |
| exon-exon | CIAPIN1 | 16 | - | CIAPIN1 | 16 | + |
| exon-exon | LASP1 | 17 | + | LASP1 | 17 | - |
| intron-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| intron-exon | GAREM2 | 2 | + | RNA45SN1 | 21 | - |
| exon-exon | MFF | 2 | + | MFF | 2 | - |
| exon-exon | SEPTIN7 | 7 | + | SEPTIN7 | 7 | - |
| exon-exon | MED21 | 12 | + | MED21 | 12 | - |
| intron-exon | TRIM26 | 6 | - | ND1 | MT | + |
| exon-exon | NORAD | 20 | - | MAML3 | 4 | - |
| exon-exon | RPL13AP25 | 13 | + | SF3A3 | 1 | + |
| exon-exon | ND4 | MT | - | COX1 | MT | - |
| exon-exon | FAM136A | 2 | - | FAM136A | 2 | + |
| exon-exon | TPCN1 | 12 | + | YARS2 | 12 | - |
| exon-intron | MAP3K20 | 2 | + | MAP3K20-AS1 | 2 | - |
| exon-exon | LOC105370202 | 13 | - | RB1 | 13 | - |
| exon-exon | PHACTR4 | 1 | + | PHACTR4 | 1 | - |
| exon-intron | UBE4A | 11 | + | LOC100131626 | 11 | - |
| exon-exon | OGFRL1 | 6 | + | OGFRL1 | 6 | - |
| exon-exon | GSAP | 7 | - | GSAP | 7 | + |
| exon-exon | RNF19A | 8 | - | RNF19A | 8 | + |
| exon-intron | EIF2S2 | 20 | - | LOC101926913 | 2 | - |
| exon-intron | PGM2L1 | 11 | - | LOC112268078 | 11 | + |
| exon-exon | HAUS1 | 18 | + | HAUS1 | 18 | - |
| exon-exon | SLC2A12 | 6 | + | ZNF236 | 18 | - |
| exon-intron | LOC105373071 | | - | LOC107985535 | | - |
| exon-exon | BRD7 | 16 | + | BRD7 | 16 | - |
| intron-exon | CDK5RAP2 | 9 | + | FBXW2 | 9 | + |
| exon-intron | APLP2 | 11 | - | ZFAND6 | 15 | - |
| exon-intron | YIPF4 | 2 | - | SPAST | 2 | - |
| exon-exon | CTBP1 | 4 | - | MANEAL | 1 | + |
| intron-exon | CASK | X | + | FAM13A | 4 | + |
| exon-intron | DGKA | 12 | - | MIR4713HG | 15 | + |
| exon-intron | TYSND1 | 10 | + | HMGCS1 | 5 | + |
| exon-intron | EEF1A1 | 6 | + | SEMA5A | 5 | + |
| exon-exon | CXCL12 | 10 | + | CXCL12 | 10 | - |
| exon-exon | AHCYL1 | 1 | - | AHCYL1 | 1 | + |
| exon-exon | EEF1A1P6 | 7 | + | EEF1A1 | 6 | - |
| intron-exon | TMEM241 | 18 | - | CABLES1 | 18 | + |
| intron-exon | SGK1 | 6 | + | INS-IGF2 | 11 | + |
| exon-intron | MIR12136 | 1 | - | DARS1 | 2 | + |
| exon-exon | PPDPF | 20 | - | PPDPF | 20 | + |
| intron-exon | RANBP2 | 2 | + | MAP2 | 2 | - |
| exon-exon | TUBA1B | 12 | + | RNA45SN3 | 21 | + |
| exon-intron | C3 | 19 | + | RPS19BP1 | | + |
| exon-intron | SLC35A3 | | + | NUTM2B-AS1 | 10 | - |
| exon-intron | RNA45SN2 | 21 | - | LSAMP | 3 | - |
| exon-intron | TUBB4A | 19 | + | RBM20 | 10 | - |
| intron-exon | TSPAN9 | 12 | + | MAML1 | 5 | - |
| exon-exon | ACTA2-AS1 | 10 | + | ACTA2 | 10 | - |
| exon-exon | EIF5B | 2 | - | EIF5B | 2 | + |
| intron-exon | MACF1 | 1 | + | SERPINA5 | 14 | + |
| intron-exon | CEP295 | 11 | - | XRCC1 | 19 | + |
| exon-exon | PRR12 | 19 | - | H19 | 11 | - |
| intron-exon | TAX1BP1 | 7 | + | ZNF766 | | + |
| exon-exon | DGAT2 | 11 | - | TMBIM6 | 12 | - |
| exon-exon | UPF3B | X | + | RNA45SN2 | 21 | - |
| intron-exon | ARAP3 | 5 | + | LOC105378460 | | - |
| exon-exon | ENY2 | 8 | - | SF3B1 | 2 | + |
| exon-exon | STK19 | 6 | - | CLU | 8 | + |
| intron-exon | SLC25A37 | 8 | - | PGRMC1 | X | - |
| exon-intron | C3 | 19 | + | SCAMP2 | 15 | + |
| exon-exon | APOA1 | 11 | + | APOA1-AS | 11 | + |
| exon-exon | RAC1 | 7 | - | IFIT1B | | - |
| exon-intron | PPP6R3 | 11 | + | AP003096.1 | | + |
| exon-exon | SLC39A8 | 4 | + | C11orf21 | | + |
| exon-intron | CLN6 | 15 | + | HCG17 | | + |
| exon-exon | MRPL9 | 1 | - | NCAM1 | 11 | + |
| exon-intron | H6PD | 1 | - | PEX14 | 1 | - |
| exon-intron | H6PD | 1 | - | PEX14 | 1 | - |
| exon-intron | UQCRB | 8 | + | LOC105372671 | | + |
| exon-exon | LOC112268423 | 2 | - | RABL2A | 2 | - |
| intron-exon | MBD5 | 2 | - | POLK | | - |
| exon-intron | CHCHD2P6 | | - | DOCK3 | | - |
| exon-exon | ZNF587 | 19 | + | UBE2CP5 | 19 | + |
| intron-exon | EVA1C | 21 | + | NEAT1 | 11 | + |
| exon-exon | USP24 | 1 | - | NFAT5 | 16 | - |
| exon-intron | EIF3E | 8 | + | CREBBP | 16 | + |
| intron-exon | TOPBP1 | 3 | + | CEP135 | 4 | - |
| intron-exon | ZIM2 | 19 | + | PEG3-AS1 | 19 | + |
| intron-exon | CECR2 | 22 | - | EPB41 | 1 | - |
| intron-exon | SETD2 | 3 | + | PIPOX | 17 | - |
| intron-exon | WBP2NL | 22 | + | ELK1 | X | + |
| exon-exon | TROAP | 12 | - | TROAP | 12 | + |
| exon-intron | AFMID | 17 | - | KLRG1 | 12 | + |
| exon-intron | LINC00337 | 1 | - | CHCHD3 | 7 | + |
| exon-intron | PSAP | 10 | + | BMS1P2-AGAP9 | 10 | - |
| exon-intron | ATG2B | 14 | + | LOC105369953 | 12 | + |
| exon-intron | NDUFA4L2 | 12 | + | LOC112163617 | 12 | + |
| exon-exon | AUP1 | 2 | + | EEF2 | 19 | + |
| exon-intron | POLDIP3 | 22 | + | THA1P | 17 | - |
| exon-exon | FAU | 11 | + | FAU | 11 | - |
| exon-intron | COPE | 19 | + | HBP1 | 7 | + |
| exon-exon | RACK1 | 5 | + | STOX2 | 4 | - |
| exon-exon | PKM | 15 | + | PTK2B | 8 | - |
| exon-exon | DCTN1 | 2 | - | DCTN1 | 2 | + |
| intron-exon | IGL | 22 | - | IGLC2 | 22 | - |
| intron-exon | LOC112268138 | 14 | + | IGHG3 | 14 | + |
| intron-exon | LOC112268138 | 14 | + | IGHG1 | 14 | + |
| intron-exon | LOC112268138 | 14 | + | IGHG1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG1 | 14 | + |
| exon-exon | COX3 | MT | + | COX3 | MT | - |
| exon-exon | HLA-C | 6 | - | HLA-C | 6 | + |
| exon-intron | NAIP | 5 | - | GTF2H2 | 5 | + |
| exon-intron | ND2 | MT | - | LINC01943 | 2 | - |
| exon-exon | STK17B | 2 | - | STK17B | 2 | + |
| exon-intron | FMR1-AS1 | X | + | LOC107032825 | X | + |
| intron-exon | CGREF1 | 2 | - | KHK | 2 | - |
| exon-exon | SYCE2 | 19 | - | LSP1 | 11 | - |
| exon-exon | PTGES3 | 12 | - | PTGES3 | 12 | + |
| exon-exon | NACA | 12 | - | NACA | 12 | + |
| exon-exon | WNT5A | 3 | - | WNT5A | 3 | + |
| intron-exon | ATG7 | 3 | + | VGLL4 | 3 | - |
| exon-intron | IGKC | 2 | + | IGK | 2 | + |
| exon-intron | ATP6 | MT | + | MTATP6P1 | 1 | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | EIF3H | 8 | - | EIF3H | 8 | + |
| exon-exon | GSN | 9 | + | GSN | 9 | - |
| exon-exon | IGHG1 | 14 | - | IGHG1 | 14 | + |
| exon-intron | IGLC3 | 22 | + | IGL | 22 | - |
| exon-exon | ATP6 | MT | + | ATP6 | MT | - |
| exon-exon | PPP1R12A | 12 | - | PPP1R12A | 12 | + |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN2 | 21 | - |
| exon-intron | SEC23A | 14 | + | PSMB5 | 14 | - |
| exon-exon | PLTP | 20 | - | CTSA | 20 | - |
| exon-exon | EEF1A1P11 | 1 | - | MAN1B1 | | - |
| exon-exon | OR6F1 | 1 | + | OR14A2 | 1 | + |
| exon-intron | GNB5 | 15 | + | DLG2 | 11 | + |
| exon-exon | SMARCA1 | X | - | CNP | 17 | + |
| exon-exon | EEF1A1 | 6 | - | EEF1A1P13 | 5 | + |
| exon-exon | UTP20 | 12 | + | UTP20 | 12 | - |
| exon-intron | EID1 | 15 | + | SHC4 | 15 | - |
| exon-exon | PLPBP | 8 | + | PLPBP | 8 | - |
| exon-intron | IGHM | 14 | + | IGHM | 14 | - |
| exon-intron | ZMYND8 | 20 | + | AC108721.2 | 12 | - |
| exon-intron | RPL7P9 | 1 | + | RAD51AP1 | 12 | - |
| exon-exon | ND5 | MT | + | ND4 | MT | + |
| exon-exon | HSPA8 | 11 | - | HSPA8 | 11 | + |
| exon-exon | IGHG1 | 14 | - | IGHG1 | 14 | + |
| intron-exon | IGL | 22 | + | IGLC2 | 22 | - |
| exon-exon | NDUFA11 | 19 | + | NDUFA11 | 19 | - |
| exon-exon | ARHGDIA | 17 | + | TNNT3 | 11 | - |
| exon-exon | RACK1 | 5 | + | CAP1 | 1 | - |
| exon-intron | CIB2 | 15 | + | RNA28SP | 21 | - |
| exon-exon | BRWD1 | 21 | + | CTDNEP1 | 17 | + |
| exon-intron | LOC283387 | | - | ZBTB46 | 20 | - |
| intron-exon | AC073539.3 | 19 | - | LOC107985324 | 19 | - |
| exon-exon | CHGA | 14 | - | CHGA | 14 | + |
| exon-exon | TIMM50 | 19 | - | ACTR3C | 7 | + |
| intron-exon | RIC3-DT | 11 | - | RIC3 | 11 | - |
| exon-intron | POM121L8P | 22 | - | EFCAB6 | 22 | + |
| intron-exon | PRIM2 | 6 | + | GUSBP4 | 6 | + |
| exon-intron | ZNF22-AS1 | 10 | + | CEP164P1 | 10 | + |
| exon-exon | IGLC2 | 22 | + | IGLC2 | 22 | - |
| exon-exon | EXOC5 | 14 | - | EXOC5 | 14 | + |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN1 | 21 | - |
| intron-exon | IGL | 22 | - | IGLC3 | 22 | + |
| exon-intron | GEMIN8 | X | - | GEMIN8 | X | + |
| exon-intron | LL21NC02-21A1.1 | 21 | + | PRPF31 | 19 | - |
| exon-intron | CD9 | 12 | + | LOC105369625 | 12 | - |
| exon-exon | TUBA1B | 12 | + | TCF20 | 22 | + |
| exon-exon | LOC105372725 | 20 | + | LOC102723814 | 20 | + |
| intron-exon | RANBP9 | 6 | + | MCUR1 | 6 | + |
| exon-exon | RPL10A | 6 | + | RPL10A | 6 | - |
| exon-exon | RPS16 | 19 | - | ZNF90 | 19 | - |
| intron-exon | COX1 | MT | + | MIR12136 | 1 | - |
| exon-exon | RPS3 | 11 | + | RPS3 | 11 | - |
| exon-exon | NR3C1 | 5 | - | NR3C1 | 5 | + |
| exon-exon | PABPC1 | 8 | - | OGA | 10 | - |
| exon-exon | CD74 | 5 | + | CD74 | 5 | - |
| intron-exon | ZBTB8OS | 1 | + | NAA25 | 12 | + |
| intron-exon | PLEKHB2 | 2 | - | FAR2P4 | 2 | - |
| exon-exon | FKBP8 | 19 | + | LIG4 | 13 | + |
| exon-intron | GSN | 9 | - | RNA28SP | 21 | - |
| exon-exon | OLFML1 | | - | PIGCP1 | | - |
| exon-exon | MARCKS | 6 | - | LGI4 | 19 | + |
| exon-exon | RPLP2 | 11 | - | PEG10 | 7 | - |
| exon-exon | PRKAR2A | 3 | - | PRKAR2A | 3 | + |
| exon-exon | COX1 | MT | + | COX1 | MT | - |
| exon-intron | RNA45SN3 | 21 | + | TPTEP2-CSNK1E | 22 | + |
| exon-exon | LOC100507642 | 7 | - | EDARADD | 1 | - |
| exon-exon | NUDCD2 | 5 | - | NUDCD2 | 5 | + |
| exon-intron | NUDCD2 | 5 | + | BACH2 | 6 | + |
| exon-exon | POMT2 | 14 | - | POMT2 | 14 | + |
| exon-intron | ACTBP2 | 5 | + | SNORD140 | 22 | + |
| exon-exon | RRAGA | 9 | + | RRAGA | 9 | - |
| exon-intron | XAGE2 | X | - | LOC105377209 | X | - |
| exon-exon | SEC62 | 3 | + | SEC62 | 3 | - |
| exon-intron | COX17 | 3 | + | AC092910.3 | 3 | + |
| exon-exon | SERPING1 | 11 | - | CPNE1 | 20 | + |
| exon-exon | RALY | 20 | - | KPNB1 | 17 | - |
| intron-exon | DPP9 | 19 | + | LOC105378179 | 14 | + |
| exon-exon | CCDC92 | 12 | + | BDKRB2 | 14 | - |
| intron-exon | IGH | 14 | + | IGHG1 | 14 | + |
| intron-exon | RASSF4 | 10 | + | DDB1 | 11 | + |
| exon-exon | BCLAF1 | 6 | + | SEMA6A | 5 | + |
| exon-exon | SLIT3 | 5 | + | PCNP | 3 | - |
| exon-exon | COX4I1 | 16 | - | TOMM22 | 22 | - |
| exon-exon | DCC | 18 | + | DCC | 18 | - |
| exon-exon | KIF3B | 20 | + | KIF3B | 20 | - |
| exon-exon | SLC25A44 | 1 | - | IGF2R | 6 | - |
| exon-exon | GPX3 | 5 | - | RPN2 | 20 | - |
| exon-exon | CAPZB | 1 | + | TAP2 | 6 | + |
| intron-exon | PACS2 | 14 | - | KRAS | 12 | + |
| exon-exon | EIF1B | 3 | - | EIF1B | 3 | + |
| exon-intron | KRTCAP2 | 1 | + | RNA28SP | 21 | - |
| intron-exon | AC007000.3 | 7 | - | POLR2J2 | 7 | + |
| exon-intron | OR10G3 | 14 | + | PDE4D | 5 | + |
| exon-intron | GAPDH | 12 | - | PTCH1 | 9 | + |
| exon-exon | DOC2A | 16 | - | INO80E | 16 | - |
| exon-intron | COLEC11 | 2 | - | PITPNC1 | 17 | - |
| exon-intron | IGKC | 2 | + | IGK | 2 | + |
| exon-intron | EEF1A1 | 6 | + | LOC107986859 | 7 | - |
| exon-exon | IGLL5 | 22 | + | IGLC2 | 22 | + |
| exon-exon | TUG1 | 22 | + | TUG1 | 22 | - |
| exon-exon | RPS4X | X | - | RPS4X | X | + |
| exon-exon | KPNB1 | 17 | + | KPNB1 | 17 | - |
| exon-exon | PDCD4 | 10 | + | PDCD4 | 10 | - |
| exon-exon | BCAT1 | 12 | + | BCAT1 | 12 | - |
| exon-exon | SFPQ | 1 | - | SUMO3 | 21 | - |
| intron-exon | IGH | 14 | + | IGHG3 | 14 | + |
| exon-exon | IGHG1 | 14 | + | IGHG1 | 14 | - |
| exon-exon | AP2M1 | 3 | + | AP2M1 | 3 | - |
| exon-intron | IGLC2 | 22 | + | IGL | 22 | + |
| exon-intron | IGLC3 | 22 | + | IGL | 22 | + |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | HNRNPA2B1 | 7 | - | HNRNPA2B1 | 7 | + |
| exon-intron | ND4 | MT | + | LOC102723803 | 9 | - |
| exon-exon | HLA-DPA1 | 6 | + | HLA-DPA1 | 6 | - |
| exon-exon | IGHGP | 14 | - | IGHG1 | 14 | + |
| intron-exon | ZNF513 | 2 | + | ZNF513 | 2 | - |
| exon-exon | STAT2 | 12 | - | STAT2 | 12 | + |
| intron-exon | AC008915.2 | 16 | - | COG7 | 16 | - |
| exon-exon | MARCHF6 | 5 | + | MARCHF6 | 5 | - |
| exon-exon | NOL11 | 17 | + | NOL11 | 17 | - |
| exon-exon | SPAG9 | 17 | - | SPAG9 | 17 | + |
| exon-exon | NEAT1 | 11 | + | NEAT1 | 11 | - |
| exon-exon | LPP | 3 | + | LPP | 3 | - |
| exon-exon | SPRY1 | 4 | + | SPRY1 | 4 | - |
| exon-intron | EID1 | 15 | + | SHC4 | 15 | - |
| exon-exon | UBE2G1 | 17 | - | UBE2G1 | 17 | + |
| exon-exon | TMTC3 | 12 | + | TMTC3 | 12 | - |
| exon-exon | GNA13 | 17 | - | GNA13 | 17 | + |
| intron-exon | ABCB1 | 7 | - | LRIG2 | 1 | - |
| exon-exon | IWS1 | 2 | + | IWS1 | 2 | - |
| exon-intron | JTB | 1 | + | JTB | 1 | - |
| exon-intron | CCT3 | 1 | + | HVCN1 | 12 | + |
| exon-exon | POU2F3 | 11 | + | LPP | 3 | - |
| intron-exon | AL080313.1 | 6 | - | LOC105374943 | 6 | - |
| exon-intron | LOC105371009 | 15 | + | LINC02251 | 15 | + |
| intron-exon | SUCLA2 | 13 | + | LINC00444 | 13 | + |
| exon-intron | NDUFA4L2 | 12 | + | LOC112163617 | 12 | + |
| exon-intron | TCEAL2 | X | - | DLG2 | 11 | + |
| exon-intron | ZNF420 | 19 | + | ZNF585A | 19 | + |
| intron-exon | AL161785.3 | 9 | - | LOC105376290 | 9 | - |
| exon-intron | SSTR4 | 20 | - | AL049651.2 | 20 | - |
| intron-exon | SUCLA2 | 13 | + | LINC00444 | 13 | + |
| exon-intron | FTL | 19 | - | LOC107985923 | 2 | + |
| exon-intron | NME2P1 | 12 | - | MTND1P23 | 1 | + |
| exon-intron | RPL41 | 12 | - | RPL24 | 3 | - |
| exon-intron | MTIF2 | 2 | + | CCDC88A | 2 | + |
| intron-exon | LOC100996731 | 1 | + | PCGF5 | 10 | - |
| exon-exon | SEPTIN1 | 16 | + | ZNF48 | 16 | + |
| exon-exon | AZIN1 | 8 | - | AEBP2 | 12 | + |
| exon-exon | SULF2 | 20 | - | NCOA3 | 20 | - |
| exon-intron | EIF2AK2 | 2 | + | OSBPL9 | 1 | - |
| intron-exon | KCNAB2 | 1 | - | FGFR1 | 8 | + |
| exon-exon | EBF1 | 5 | - | EBF1 | 5 | + |
| exon-exon | RNA45SN1 | 21 | + | SGSM3 | 22 | - |
| exon-intron | CDK4 | 12 | - | AC007556.1 | 2 | - |
| intron-exon | ADAM9 | 8 | - | PLEKHA2 | 8 | - |
| exon-exon | UBE2D2 | 5 | - | HNRNPU | 1 | + |
| exon-exon | ZFP91-CNTF | 11 | - | RGPD1 | 2 | - |
| intron-exon | ARL10 | 5 | - | RPL14P1 | 12 | - |
| exon-exon | RNF185 | 22 | - | STEAP2 | 7 | - |
| exon-exon | RNA45SN1 | 21 | + | MBP | 18 | - |
| exon-exon | CACNA1A | 19 | - | DNAJC13 | 3 | + |
| exon-intron | PTGS1 | 9 | + | GNAS | 20 | + |
| exon-exon | RPS17P16 | 22 | - | MFSD11 | 17 | + |
| exon-exon | ATXN2 | 12 | + | RBBP8 | 18 | + |
| exon-exon | PRR15 | 7 | + | MAP7D1 | 1 | + |
| exon-exon | MALAT1 | 11 | + | SPRED1 | 15 | + |
| intron-exon | SLC44A1 | 9 | - | RPRD2 | 1 | + |
| exon-exon | VPS51 | 11 | - | PRNP | 20 | - |
| exon-intron | LOC105375322 | 7 | - | LOC112268284 | 21 | - |
| exon-exon | TBKBP1 | | - | TUFM | 16 | - |
| exon-exon | STEAP2 | 7 | - | SEC23A | 14 | + |
| exon-intron | RCC2 | 1 | - | LOC643634 | | + |
| intron-exon | RBM4 | 11 | + | RBM4B | 11 | + |
| exon-intron | UBE2F-SCLY | 2 | - | CHURC1-FNTB | 14 | + |
| intron-exon | FOXO3 | 6 | - | SNRNP48 | 6 | - |
| exon-exon | MFRP | | + | C1QTNF5 | | + |
| intron-exon | AC113414.1 | 5 | - | GNAS | 20 | + |
| exon-exon | KIF1B | 1 | - | GALNT11 | 7 | + |
| exon-exon | RPL28 | 19 | - | EPB41L1 | 20 | - |
| exon-exon | SV2A | 1 | + | DENND5A | 11 | - |
| exon-exon | MXD3 | 5 | - | PRELID1 | 5 | - |
| exon-intron | HBG2 | 11 | + | IMMP2L | 7 | + |
| exon-exon | COL1A1 | 17 | + | HSP90B1 | 12 | - |
| exon-exon | LOC112267958 | 6 | - | KLC4 | 6 | - |
| exon-exon | MOSPD3 | 7 | - | CCDC86 | 11 | + |
| exon-exon | APLP2 | 11 | - | AFAP1L1 | 5 | - |
| intron-exon | CTR9 | 11 | - | PHYKPL | 5 | + |
| intron-exon | BCL6 | 3 | - | LOC100131635 | 3 | - |
| exon-intron | LOC112267958 | 6 | - | SERPINA4 | 14 | + |
| exon-exon | PRDM11 | 11 | - | ABLIM1 | 10 | + |
| exon-exon | SRI | 7 | + | SRIP3 | Y | + |
| exon-exon | LOC102724050 | 12 | - | EZR | 6 | + |
| exon-exon | PITRM1 | 10 | + | PITRM1-AS1 | 10 | + |
| intron-exon | TBC1D8 | 2 | - | RPL31 | 2 | - |
| intron-exon | LOC105376392 | 10 | - | ATP5F1C | 10 | - |
| exon-intron | TSC22D1 | 13 | + | ITCH | 20 | + |
| intron-exon | LIX1L | 1 | - | LIX1L-AS1 | 1 | - |
| exon-exon | FLJ32255 | 5 | + | LOC648987 | 5 | + |
| intron-exon | ABCA17P | 16 | - | ZNF598 | 16 | + |
| exon-exon | SPDYE3 | 7 | + | PMS2P7 | 7 | - |
| exon-intron | IFITM2 | 11 | - | RIN2 | 20 | - |
| exon-exon | RPS13 | 11 | + | RPS13 | 11 | - |
| exon-exon | APMAP | 20 | + | PANK3 | 5 | - |
| intron-exon | AK1 | 9 | + | GOLGA2 | 9 | + |
| intron-exon | AFF3 | 2 | + | MINK1 | 17 | - |
| intron-exon | DTL | 1 | + | FN1 | 2 | + |
| intron-exon | AC002091.1 | 17 | - | CTB-41I6.1 | 17 | - |
| exon-exon | TMEM184A | 7 | - | MAFK | 7 | - |
| exon-intron | A2M | 12 | - | KLRG1 | 12 | + |
| exon-intron | NDRG4 | 16 | - | GATAD2B | 1 | + |
| exon-intron | CHMP4B | 20 | - | ASTN2 | 9 | + |
| intron-exon | FKBP3 | 14 | + | MIS18BP1 | 14 | + |
| exon-exon | RPL19P4 | 2 | - | DTD1 | 20 | - |
| intron-exon | ZNF141 | 4 | + | RPS17 | 15 | - |
| exon-exon | DSC2 | 18 | - | DSC2 | 18 | + |
| exon-exon | JMJD1C | 10 | - | JMJD1C | 10 | + |
| exon-exon | PSMD13 | 11 | - | LOC107986811 | 7 | - |
| intron-exon | TSPOAP1-AS1 | 17 | + | SREBF2 | 22 | - |
| intron-exon | IGHA2 | 14 | + | IGHA1 | 14 | + |
| exon-intron | CD37 | 19 | - | DNM2 | 19 | - |
| exon-intron | PABPC1P3 | X | + | EPRS1 | 1 | + |
| intron-exon | RNR2 | MT | - | PPP1R13B | 14 | - |
| intron-exon | ANKDD1A | 15 | + | ANP32B | 9 | - |
| intron-exon | LINC01037 | 1 | - | LINC01036 | 1 | - |
| intron-exon | KLHL6 | 3 | - | MCM4 | 8 | + |
| exon-exon | MATR3 | 5 | + | MATR3 | 5 | - |
| exon-exon | ITIH5 | 10 | - | ITIH5 | 10 | + |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | ND4 | MT | + | ND4 | MT | - |
| exon-exon | SAP18 | 13 | + | SAP18 | 13 | - |
| exon-exon | IGHG3 | 14 | - | IGHGP | 14 | - |
| exon-exon | EGR1 | 5 | + | EGR1 | 5 | - |
| exon-intron | ARHGAP45 | 19 | + | PLK5 | 19 | + |
| exon-exon | SSU72 | 1 | - | FTH1 | 11 | - |
| exon-intron | LOC105373618 | 2 | - | RBM6 | 3 | - |
| exon-exon | CDK4 | 12 | - | DNASE1 | 16 | - |
| exon-exon | ZCRB1 | 12 | + | PPHLN1 | 12 | + |
| exon-intron | IGFBP7 | 4 | + | SAXO1 | 9 | - |
| intron-exon | AL512658.1 | 6 | + | LOC105378073 | 6 | + |
| intron-exon | AP003550.1 | 8 | + | ATP6V1C1 | 8 | + |
| intron-exon | BCL2L13 | 22 | - | UBN2 | 7 | - |
| exon-intron | PIM3 | 22 | - | LOC105374298 | 3 | + |
| exon-exon | RPL10P16 | 19 | + | UBE2F-SCLY | 2 | - |
| exon-exon | HLA-E | 6 | - | HLA-E | 6 | + |
| exon-exon | FXYD2 | 11 | + | FXYD6-FXYD2 | 11 | + |
| exon-exon | MRPL45 | 17 | - | ND5 | MT | - |
| exon-intron | KMT2E-AS1 | 7 | - | GPATCH8 | 17 | - |
| intron-exon | IGL | 22 | - | IKZF1 | 7 | - |
| intron-exon | ZRSR2 | X | - | ZRSR2 | X | + |
| intron-exon | LOC107987075 | 9 | + | FAM27E3 | 9 | + |
| intron-exon | LOC105370582 | 14 | + | LOC112267892 | 14 | + |
| exon-intron | YBX3 | 12 | + | VSTM4 | 10 | + |
| intron-exon | LOC79999 | 17 | - | GRAPL | 17 | - |
| exon-exon | ATP6 | MT | + | ATP6 | MT | - |
| exon-exon | AP3S1 | 5 | + | AP3S1 | 5 | - |
| exon-exon | IGHG1 | 14 | - | IGHG1 | 14 | + |
| exon-exon | HLA-B | 6 | + | HLA-B | 6 | - |
| exon-exon | THBS1 | 15 | + | THBS1 | 15 | - |
| exon-exon | RRM2 | 2 | - | NCKAP1 | 2 | + |
| intron-exon | DGKI | 7 | - | RPS21 | 20 | + |
| exon-exon | PRICKLE3 | X | - | PLP2 | X | - |
| intron-exon | MIR497HG | 17 | - | LINC02099 | 8 | - |
| exon-exon | PCNP | 3 | + | AKAP13 | 15 | - |
| exon-intron | PHKG1 | 7 | - | ABCC9 | 12 | + |
| exon-intron | LOC79999 | 17 | - | EPN2 | 17 | + |
| exon-intron | RPL5 | 1 | + | DIPK1A | 1 | - |
| exon-exon | MAN1A1 | 6 | - | MAN1A1 | 6 | + |
| exon-intron | GLTP | 12 | + | DYRK1A | 21 | - |
| exon-exon | RBM39 | 20 | - | RBM39 | 20 | + |
| exon-intron | PAIP2 | 5 | + | SLC23A1 | 5 | - |
| exon-exon | RUFY2 | 10 | - | RUFY2 | 10 | + |
| exon-intron | OGA | 10 | - | BTRC | 10 | - |
| exon-exon | NPM1 | 5 | + | NPM1 | 5 | - |
| exon-exon | MALAT1 | 11 | + | REEP3 | 10 | - |
| intron-exon | HMGB1 | 13 | - | LOC107984577 | 13 | - |
| exon-exon | KPNA2 | 17 | + | KPNA2 | 17 | - |
| exon-intron | LPXN | 11 | + | CORO7-PAM16 | 16 | + |
| intron-exon | TRIP12 | 2 | - | ST6GAL1 | 3 | - |
| intron-exon | IGL | 22 | - | MEF2C | 5 | + |
| exon-exon | RBFOX2 | 22 | + | AHCYL1 | 1 | + |
| intron-exon | LOC112268284 | 21 | - | ARHGEF7 | 13 | + |
| intron-exon | LOC105373579 | 2 | - | RUVBL2 | 19 | - |
| intron-exon | PTPRG | 3 | + | FAM168A | 11 | - |
| intron-exon | AC095038.1 | 7 | + | LOC100533632 | 7 | + |
| exon-exon | KCNAB2 | 1 | - | KCNAB2 | 1 | + |
| intron-exon | FYB1 | 5 | - | OSMR | 5 | - |
| exon-exon | DYNLRB1 | 20 | - | LOC112268284 | 21 | - |
| exon-intron | EMILIN1 | 2 | - | RNA28SP | 21 | - |
| intron-exon | POP1 | 8 | + | EHD4 | 15 | + |
| intron-exon | PDE12 | 3 | + | RPL13AP5 | 10 | + |
| exon-exon | SERBP1 | 1 | - | SERBP1 | 1 | + |
| exon-intron | LOC441242 | 7 | - | INTS4P2 | 7 | + |
| exon-exon | PLPPR3 | 19 | - | PTBP1 | 19 | - |
| intron-exon | FNDC1 | 6 | - | SYTL3 | 6 | - |
| intron-exon | LOC105369743 | 12 | - | PRKAB2 | 1 | + |
| intron-exon | CWF19L2 | 11 | - | SLC30A6 | 2 | - |
| exon-exon | MAP3K2-DT | 2 | - | GSTZ1 | 14 | - |
| exon-intron | NUP50 | 22 | + | LOC105373064 | 22 | - |
| exon-exon | SERPINA5 | 14 | + | LOC112268127 | 14 | - |
| exon-intron | ATL3 | 11 | - | LOC107984336 | 11 | + |
| exon-intron | ZBTB33 | X | + | TMEM255A | X | - |
| exon-exon | LOC105375489 | 7 | - | ARF5 | 7 | - |
| intron-exon | AC108059.3 | 2 | + | ENY2 | 8 | - |
| exon-exon | TMEM63A | 1 | - | EPHX1 | 1 | - |
| exon-exon | NT5C2 | 10 | + | RN7SL3 | 14 | + |
| exon-exon | VDR | 12 | + | VDR | 12 | - |
| intron-exon | RBM27 | 5 | + | LOC105378213 | 5 | + |
| exon-intron | CCDC86 | 11 | - | AP000777.2 | 11 | - |
| exon-exon | IFITM3 | 11 | + | MICOS10 | 1 | + |
| intron-exon | DRG1 | 22 | + | EIF4ENIF1 | 22 | + |
| intron-exon | LOC105376767 | | - | CELA2A | | - |
| exon-intron | GCM2 | 6 | + | AL024498.2 | 6 | + |
| exon-intron | LOC100996442 | 1 | + | SEPTIN7 | 7 | - |
| exon-intron | RPS15P9 | 19 | + | RPS15P4 | 2 | - |
| exon-exon | MSH3 | 5 | + | MSH3 | 5 | - |
| exon-exon | PFKFB3 | 10 | + | PFKFB3 | 10 | - |
| exon-exon | MUC1 | 1 | - | MUC1 | 1 | + |
| exon-exon | PAK2 | 3 | + | PAK2 | 3 | - |
| exon-exon | MYLIP | 6 | + | MYLIP | 6 | - |
| exon-exon | DSP | 6 | + | DSP | 6 | - |
| intron-exon | LOC105370802 | 15 | - | BLOC1S6 | 15 | - |
| exon-exon | ZNF107 | 7 | + | ZNF117 | 7 | + |
| exon-exon | COX2 | MT | + | COX2 | MT | - |
| exon-exon | GAPVD1 | 9 | - | KPNA2 | 17 | + |
| exon-exon | GJA1 | 6 | - | GJA1 | 6 | + |
| exon-exon | COL1A1 | 17 | + | COL1A1 | 17 | - |
| exon-exon | ITGB1 | 10 | + | ITGB1 | 10 | - |
| exon-exon | LMNA | 1 | - | LMNA | 1 | + |
| intron-exon | RP4-536B24.3 | | - | CTSB | 8 | - |
| exon-exon | APLP2 | 11 | + | PPM1G | 2 | - |
| exon-intron | DNM1P46 | 15 | + | RN7SL484P | 15 | + |
| exon-exon | RAB31 | 18 | - | RAB31 | 18 | + |
| intron-exon | AC023790.2 | 12 | - | GPRC5D-AS1 | 12 | - |
| exon-exon | IPO9 | 1 | + | IPO9 | 1 | - |
| exon-intron | AZIN1 | 8 | - | GRIK4 | 11 | - |
| exon-intron | TOMM5 | 9 | + | TMEM165 | 4 | + |
| intron-exon | RNR2 | MT | - | LINC01061 | 4 | + |
| intron-exon | EEF1AKMT3 | 12 | - | METTL1 | 12 | - |
| exon-exon | TLCD3B | 16 | - | C16orf92 | 16 | - |
| exon-intron | LOC107984356 | 11 | - | PGM2L1 | 11 | - |
| exon-intron | LINC00375 | 13 | + | KAT6B | 10 | + |
| exon-exon | PEX10 | 1 | - | RER1 | 1 | - |
| exon-intron | LOC105377407 | 4 | + | AC133530.1 | 4 | + |
| exon-exon | FBXO11 | 2 | + | LOC100506235 | 2 | + |
| exon-exon | C20orf96 | 20 | + | KMT2D | 12 | + |
| exon-exon | TRMU | 22 | + | NSMCE2 | 8 | - |
| exon-exon | TAPBPL | 12 | - | ARHGAP21 | 10 | + |
| exon-exon | GLG1 | 16 | + | TMEM127 | 2 | + |
| exon-exon | FGFBP3 | 10 | + | ITGA1 | 5 | - |
| exon-exon | GNB1 | 1 | + | TARDBP | 1 | - |
| exon-exon | SERPINF1 | 17 | + | WDR1 | 4 | - |
| exon-exon | RPS2P55 | X | + | MAF | 16 | + |
| exon-exon | PSMB4 | 1 | - | RNA45SN1 | 21 | - |
| intron-exon | LOC105376413 | 10 | + | LOC105376412 | 10 | + |
| exon-intron | IGKC | 2 | + | KLC1 | 14 | - |
| exon-intron | PPP1R14B | 11 | + | PPP1R14B-AS1 | 11 | + |
| intron-exon | ITSN1 | 21 | - | MPHOSPH9 | 12 | + |
| exon-exon | RPL10A | 6 | - | PIK3CG | 7 | - |
| intron-exon | PHYKPL | 5 | - | HNRNPAB | 5 | - |
| exon-intron | CPNE5 | 6 | + | LOC112268284 | 21 | - |
| exon-exon | RAD9A | 11 | + | PSAT1 | 9 | - |
| exon-intron | CCNE1 | 19 | - | HIGD1A | 3 | + |
| exon-exon | ARRDC1 | 9 | - | ZNF562 | 19 | + |
| intron-exon | LOC105372255 | 19 | - | SLC14A2-AS1 | 18 | - |
| exon-intron | DDX19A | 16 | - | ZBTB43 | 9 | - |
| exon-exon | NCF2 | 1 | + | PITX1 | 5 | - |
| exon-exon | ND4 | MT | - | KLHDC4 | 16 | - |
| intron-exon | TOMM20L | 14 | + | TIMM9 | 14 | + |
| exon-exon | TANGO2 | 22 | - | NPTN | 15 | + |
| exon-exon | TPT1 | 13 | + | IST1 | 16 | - |
| intron-exon | ATP6V1E2 | 2 | + | SLC30A9 | 4 | - |
| intron-exon | GAREM2 | 2 | + | CHID1 | 11 | + |
| intron-exon | ABTB2 | 11 | - | QRICH1 | 3 | + |
| exon-exon | MAX | 14 | + | LOC100506321 | 14 | + |
| exon-exon | STK39 | 2 | + | NFIC | 19 | + |
| exon-exon | PRKCE | 2 | + | PRKCE | 2 | - |
| intron-exon | SLC9A6 | X | - | LRRC8B | 1 | - |
| exon-exon | BRD9 | 5 | + | RNA45SN1 | 21 | - |
| exon-exon | SLC25A13 | 7 | - | SEM1 | 7 | - |
| intron-exon | RPL41 | 12 | - | RBFOX2 | 22 | - |
| exon-exon | XBP1 | 22 | - | XBP1 | 22 | + |
| exon-exon | FBXL18 | 7 | + | TMED4 | 7 | + |
| intron-exon | RPLP2 | 11 | - | CEP20 | 16 | + |
| exon-intron | METTL21A | 2 | + | RAP2C-AS1 | X | + |
| exon-exon | YWHAQ | 2 | - | DEK | 6 | - |
| exon-exon | MRPL35 | 2 | + | REEP1 | 2 | + |
| exon-intron | ZNF740 | 12 | - | AGAP2 | 12 | + |
| exon-intron | H1-10 | 3 | + | H1-10-AS1 | 3 | + |
| exon-intron | NAA20 | 20 | - | TBC1D32 | 6 | + |
| exon-exon | LOC101927811 | 7 | + | ITGB8 | 7 | + |
| exon-exon | BEX4 | X | - | CTBP2 | 10 | - |
| exon-exon | GSK3A | 19 | + | PWP1 | 12 | + |
| exon-intron | CDKN2AIPNL | 5 | + | SELENOT | 3 | - |
| exon-exon | ZNF260 | 19 | - | ZNF260 | 19 | + |
| exon-exon | H3-3B | 17 | - | H3-3B | 17 | + |
| intron-exon | RNR2 | MT | - | NR3C2 | 4 | + |
| exon-exon | RNASEH2C | 11 | - | KAT5 | 11 | - |
| exon-intron | EIF3I | 1 | - | CFDP1 | 16 | + |
| exon-intron | FTL | 19 | - | MAPKAPK5 | 12 | - |
| intron-exon | LOC105370384 | 13 | - | CDC16 | 13 | - |
| exon-exon | NOL10 | 2 | + | NOL10 | 2 | - |
| exon-exon | RNA45SN2 | 21 | - | BDKRB2 | 14 | + |
| exon-exon | RBM14 | 11 | - | SLC27A2 | 15 | - |
| exon-intron | EID1 | 15 | + | SHC4 | 15 | - |
| exon-intron | ATP6 | MT | - | LINC02882 | 12 | + |
| exon-exon | CRISP3 | 6 | - | CRISP3 | 6 | + |
| exon-intron | SS18 | 18 | + | HNRNPC | 14 | - |
| intron-exon | CYB561D2 | 3 | + | SERPINA5 | 14 | - |
| exon-intron | EP300 | 22 | + | EP300-AS1 | 22 | + |
| exon-intron | UBAP1L | 15 | + | ZYX | 7 | + |
| exon-exon | ND4 | MT | - | CTSL | 9 | + |
| exon-exon | CHRNA4 | 20 | + | CHRNA4 | 20 | - |
| intron-exon | TRNL1 | MT | - | MYADM | 19 | - |
| exon-exon | CPNE4 | 3 | - | CPNE4 | 3 | + |
| exon-exon | TAF5L | 1 | + | B4GALT5 | 20 | + |
| exon-exon | OLFML2A | 9 | + | ESYT2 | 7 | - |
| exon-exon | ND3 | MT | - | ND5 | MT | - |
| intron-exon | COL6A3 | 2 | - | PDE8A | 15 | - |
| intron-exon | IGKC | 2 | + | TALAM1 | 11 | - |
| exon-exon | CD63 | 12 | + | ZNF569 | 19 | + |
| exon-exon | ZMYND8 | 20 | + | SESTD1 | 2 | + |
| exon-exon | GSK3B | 3 | + | SNRPD1 | 18 | - |
| exon-exon | HSPB1 | 7 | - | EGR1 | 5 | - |
| exon-intron | CIRBP-AS1 | 19 | - | NR5A2 | 1 | - |
| exon-intron | RNA45SN1 | 21 | + | LOC112268284 | 21 | - |
| exon-exon | LOC105372165 | 18 | + | MBD2 | 18 | + |
| exon-intron | TRIM38 | 6 | + | U91328.1 | 6 | + |
| intron-exon | C12orf60 | 12 | - | ART4 | 12 | - |
| exon-intron | FAM102A | 9 | - | AL157935.1 | 9 | - |
| exon-intron | WRN | 8 | + | AC009563.1 | 8 | + |
| exon-exon | MYL2 | 12 | + | CCDC120 | X | - |
| intron-exon | SLC16A4 | 1 | - | RBM15 | 1 | - |
| intron-exon | ZG16 | 16 | + | LOC105371167 | 16 | + |
| intron-exon | AL445363.2 | 14 | - | LOC105370449 | 14 | - |
| exon-intron | CNN2 | 19 | - | FBXO15 | 18 | + |
| intron-exon | AP001767.3 | 11 | - | RAB30-DT | 11 | - |
| exon-exon | CYB5R3 | 22 | + | CYB5R3 | 22 | - |
| exon-intron | OSBPL10 | 3 | + | MRPL51 | 12 | - |
| exon-exon | MCHR2-AS1 | 6 | - | PPP4R3A | 14 | + |
| exon-exon | DEGS2 | 14 | - | EVL | 14 | - |
| exon-intron | NBEAL1 | 2 | - | MXD1 | 2 | - |
| exon-exon | PTPRU | 1 | - | GAB1 | 4 | - |
| exon-intron | ANAPC1P4 | 2 | - | LOC102724642 | 2 | - |
| intron-exon | MFSD14A | 1 | + | SASS6 | 1 | + |
| exon-exon | RPLP1 | 15 | - | DCAF8 | 1 | + |
| exon-exon | SOX4 | 6 | - | TNNC1 | 3 | + |
| exon-exon | PPP1CA | 11 | - | RAD9A | 11 | - |
| exon-intron | OGFRL1 | 6 | + | AL136164.2 | 6 | + |
| exon-exon | CTDSP2 | 12 | + | EPSTI1 | 13 | + |
| intron-exon | DIPK1A | 1 | - | HNRNPM | 19 | - |
| exon-exon | LOC107984754 | 15 | - | NEAT1 | 11 | - |
| exon-exon | SRP68 | 17 | + | PARP1 | 1 | + |
| exon-exon | MED13 | 17 | + | LIMS1 | 2 | - |
| exon-intron | IGLC3 | 22 | + | IGL | 22 | + |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | + |
| exon-exon | TUBB | 6 | + | TUBB | 6 | - |
| exon-intron | ANKHD1-EIF4EBP3 | 5 | - | SCAF8 | 6 | - |
| exon-intron | RPL14 | 3 | - | MRPL23 | 11 | + |
| exon-intron | RPL19 | 17 | - | RPL28 | 19 | + |
| exon-exon | RPL14P1 | 12 | - | CBY1 | 22 | + |
| exon-intron | EPS8 | 12 | + | LOC102724146 | 12 | + |
| exon-exon | STN1 | 10 | + | NFE2L1 | 17 | - |
| exon-intron | KCNC2 | 12 | - | RP11-81K13.1 | 12 | - |
| exon-exon | DNAJA3 | 16 | - | DNAJA3 | 16 | + |
| exon-intron | MINDY2 | 15 | + | ZNF444P1 | 15 | + |
| exon-intron | TMED4 | 7 | + | TMEM50B | 21 | + |
| exon-exon | PLTP | 20 | - | CTSA | 20 | - |
| exon-exon | LOC105369782 | 12 | - | ERBB3 | 12 | - |
| exon-intron | LINC02815 | 1 | + | RP5-1061H20.5 | 1 | + |
| exon-exon | LINC01764 | 19 | + | UCA1 | 19 | + |
| intron-exon | RAB3GAP2 | 1 | - | WBP2 | 17 | + |
| exon-intron | LOC102724253 | 15 | + | LINC02694 | 15 | + |
| exon-intron | SKI | 1 | - | PSMD8 | 19 | - |
| intron-exon | RP11-588H23.3 | 12 | - | LOC105369827 | 12 | - |
| exon-intron | PSMB4 | 1 | - | LOC112268284 | 21 | - |
| exon-intron | TMEM121 | 14 | - | ZFC3H1 | 12 | - |
| exon-intron | TMEM201 | 1 | - | LOC101928039 | 15 | + |
| intron-exon | DOCK5 | 8 | - | STAT2 | 12 | + |
| exon-intron | CYTB | MT | - | RNA28SP | 21 | - |
| exon-exon | ZC3HAV1L | 7 | - | LAMC2 | 1 | - |
| intron-exon | AC138811.1 | 16 | + | SMG1 | 16 | + |
| exon-exon | HSF1 | 8 | - | HSF1 | 8 | + |
| exon-exon | LINC02582 | 18 | - | PPP1R8 | 1 | + |
| exon-exon | EOLA2 | X | + | NKAIN2 | 6 | + |
| intron-exon | C8orf86 | 8 | + | LOC105379383 | 8 | + |
| exon-exon | LOC107986780 | 7 | - | ADCYAP1R1 | 7 | + |
| exon-exon | TMEM181 | 6 | - | TMEM181 | 6 | + |
| exon-exon | MRPL52 | 14 | - | CTSD | 11 | + |
| exon-intron | ATF4 | 22 | - | PAX2 | 10 | - |
| intron-exon | PTPN11 | 12 | - | ELMO2 | 20 | + |
| exon-intron | NBAS | 2 | + | ARL6IP5 | 3 | + |
| exon-intron | LOC100128622 | 5 | + | LOC100128340 | 5 | + |
| exon-exon | RPS29 | 14 | + | DNAAF1 | 16 | - |
| exon-exon | CD74 | 5 | + | SOD2 | 6 | + |
| exon-intron | WDR13 | X | - | TMEM201 | 1 | - |
| exon-exon | HERC2P9 | 15 | + | HERC2P9 | 15 | - |
| exon-exon | ITGA7 | 12 | + | ITGA7 | 12 | - |
| exon-intron | FN1 | 2 | + | LOC112268430 | 2 | + |
| intron-exon | MYH2 | 17 | - | MYH8 | 17 | - |
| intron-exon | HSPB8 | 12 | - | LOC100287653 | 12 | - |
| exon-intron | MIGA1 | 1 | + | NSMCE2 | 8 | + |
| intron-exon | AC009097.2 | 16 | + | MARVELD3 | 16 | + |
| exon-exon | DCTN2 | 12 | - | MBD6 | 12 | - |
| exon-exon | CAVIN3 | 11 | + | NDUFS2 | 1 | - |
| exon-intron | ZPR1 | 11 | - | AP006216.1 | 11 | - |
| intron-exon | IGH | 14 | + | IGHG1 | 14 | + |
| exon-exon | SLC15A3 | 11 | - | TMEM132A | 11 | - |
| exon-exon | PDIA4 | 7 | + | CRHR2 | 7 | + |
| exon-intron | CTSL | 9 | - | SUGT1P4-STRA6LP-CCDC180 | 9 | - |
| exon-exon | ND6 | MT | - | NEAT1 | 11 | - |
| exon-exon | USB1 | 16 | - | NAA40 | 11 | - |
| exon-intron | SERPINE2 | 2 | + | PARD3 | 10 | + |
| exon-exon | INS-IGF2 | 11 | + | HSPD1 | 2 | + |
| exon-intron | HSP90AA1 | 14 | + | LINC02343 | 13 | + |
| exon-intron | MFN1 | 3 | - | SREBF2 | 22 | - |
| exon-exon | PLOD1 | 1 | - | TUBB | 6 | - |
| exon-exon | RUSC1-AS1 | 1 | - | FDPSP1 | 1 | - |
| exon-exon | PLPPR3 | 19 | - | PTBP1 | 19 | - |
| exon-intron | ZRANB1 | 10 | - | MIPEPP3 | 13 | + |
| intron-exon | LOC100652758 | 5 | + | G3BP1 | 5 | + |
| intron-exon | ARVCF | 22 | - | RNA45SN1 | 21 | - |
| exon-intron | LOC105375193 | 7 | + | AC003985.1 | 7 | + |
| exon-intron | GTPBP3 | 19 | - | MKX-AS1 | 10 | + |
| exon-intron | NRM | 6 | + | RNA28SP | 21 | - |
| intron-exon | AL355306.2 | 1 | - | LOC126987 | 1 | - |
| exon-exon | UQCRC1 | 3 | + | LDHB | 12 | - |
| exon-intron | RPL34 | 4 | - | TPT1-AS1 | 13 | - |
| exon-intron | FAM204A | 10 | + | DDHD2 | 8 | + |
| exon-exon | HSP90AB1 | 6 | - | PXDN | 2 | + |
| exon-exon | EIF2AK1 | 7 | - | AIMP2 | 7 | - |
| exon-exon | NOL3 | 16 | - | PLEKHA2 | 8 | - |
| exon-exon | DYSF | 2 | - | PRKCSH | 19 | - |
| exon-exon | RPS8 | 1 | - | ZNF618 | 9 | - |
| exon-intron | LOC105370188 | 13 | + | AL359706.1 | 13 | + |
| intron-exon | CCSER1 | 4 | + | MAPK1IP1L | 14 | - |
| exon-intron | TMEM213 | 7 | - | PAPOLG | 2 | - |
| exon-intron | RPS3A | 4 | - | TSNAX-DISC1 | 1 | - |
| exon-exon | MCL1 | 1 | + | SERPINA1 | 14 | + |
| exon-exon | TRA2B | 3 | + | LOC100128164 | 3 | + |
| exon-exon | RPL27A | 11 | - | XBP1 | 22 | - |
| intron-exon | AC132803.1 | 5 | + | ASS1P10 | 5 | + |
| exon-exon | HBG1 | 11 | + | FGGY | 1 | - |
| exon-intron | MIR202HG | 10 | + | RP11-159D12.6 | 17 | - |
| exon-exon | CHGA | 14 | - | CHGA | 14 | + |
| exon-exon | BCRP5 | 22 | + | TMEM191A | 22 | + |
| exon-exon | ARPC1B | 7 | - | ARPC1B | 7 | + |
| exon-exon | PIP4K2B | 17 | - | APBA3 | 19 | - |
| intron-exon | LOC105369736 | 12 | - | LRRK2 | 12 | - |
| exon-exon | SPARC | 5 | + | RBMXP2 | 9 | + |
| exon-intron | LOC112268127 | 14 | - | SERPINA5 | 14 | - |
| exon-exon | MRPS34 | 16 | + | ST6GAL1 | 3 | - |
| intron-exon | FNBP1 | 9 | + | EIF2AK2 | 2 | + |
| exon-exon | FTSJ3 | 17 | + | ARID3B | 15 | - |
| exon-exon | FUZ | 19 | - | AP2A1 | 19 | - |
| intron-exon | AL117348.1 | 1 | + | LEFTY2 | 1 | + |
| exon-exon | ZNF618 | 9 | - | RNA45SN3 | 21 | - |
| exon-intron | FUS | 16 | - | CTSB | 8 | + |
| exon-exon | PIAS1 | 15 | - | PIAS1 | 15 | + |
| intron-exon | AC018653.1 | 12 | + | PEX5 | 12 | + |
| exon-exon | EEF2 | 19 | + | FCGBP | 19 | + |
| exon-exon | RPL12 | 9 | + | IMPA2 | 18 | - |
| exon-exon | SLC25A43 | X | - | SLC25A43 | X | + |
| exon-exon | PTMA | 2 | - | COX3 | MT | + |
| exon-exon | CLU | 8 | + | SCMH1 | 1 | + |
| exon-intron | SMARCC2 | 12 | + | AC073896.4 | 12 | + |
| intron-exon | TDRKH | 1 | - | OAZ3 | 1 | - |
| exon-exon | DNAH7 | 2 | - | SLC39A10 | 2 | - |
| intron-exon | IGL | 22 | - | FAM239A | X | + |
| exon-exon | ATP6V0E2 | 7 | - | KIF5A | 12 | - |
| exon-exon | PPIF | 10 | - | TLCD3A | 17 | - |
| intron-exon | LOC101930048 | 9 | + | VLDLR-AS1 | 9 | + |
| exon-exon | ATP5PF | 21 | + | TADA3 | 3 | - |
| exon-exon | S100A11 | 1 | + | RNA45SN3 | 21 | - |
| intron-exon | SLC25A37 | 8 | - | MLF2 | 12 | + |
| exon-exon | MYL12B | 18 | - | MYL12A | 18 | - |
| exon-exon | KIF5A | 12 | + | CDK14 | 7 | + |
| exon-intron | SENP6 | 6 | - | NSG2 | 5 | + |
| exon-exon | PPM1K | 4 | - | IDS | X | - |
| intron-exon | EIF4G3 | 1 | - | HP1BP3 | 1 | - |
| exon-exon | ATP6AP1 | X | - | PRKCB | 16 | - |
| exon-exon | ANAPC16 | 10 | - | ASCC1 | 10 | - |
| exon-exon | GABRG2 | 5 | - | SCD | 10 | - |
| exon-exon | PLEKHJ1 | 19 | - | LOC105369313 | | - |
| exon-intron | SHB | 9 | - | CDH23 | 10 | + |
| exon-exon | NTRK2 | 9 | + | RNA45SN2 | 21 | + |
| intron-exon | TMEM63A | 1 | - | MSMO1 | 4 | + |
| intron-exon | IFITM3P1 | 4 | - | IFITM2 | 11 | + |
| exon-exon | LOC101927151 | 19 | - | ZNF430 | 19 | - |
| exon-intron | PCDH7 | 4 | - | AC098595.1 | 4 | - |
| intron-exon | ARL14EPL | 5 | + | LMCD1 | 3 | - |
| exon-exon | TCP1 | 6 | - | ACAT2 | 6 | - |
| intron-exon | ZNHIT3 | 17 | + | MYO19 | 17 | - |
| exon-intron | LINC01116 | 2 | + | HSP90AB1 | 6 | - |
| exon-intron | LAIR1 | 19 | + | SNHG17 | 20 | + |
| exon-intron | C2orf69 | 2 | + | LINCR-0002 | 3 | - |
| exon-exon | THOC1 | 18 | - | USP14 | 18 | - |
| exon-intron | CYB561 | 17 | + | NCALD | 8 | + |
| exon-intron | ATP6V1G2-DDX39B | 6 | + | HFM1 | 1 | + |
| intron-exon | AC025442.2 | 5 | - | ERBIN | 5 | - |
| exon-exon | NDUFS3 | 11 | - | SLC26A7 | 8 | - |
| exon-exon | PRDX5 | 11 | - | SNCAIP | 5 | - |
| exon-exon | ADAMTSL4 | 1 | - | MAT2A | 2 | - |
| exon-intron | ATP2C2 | 16 | + | NBEA | 13 | - |
| intron-exon | LOC105369631 | 12 | + | ACRBP | 12 | + |
| exon-intron | LOC107986762 | 7 | - | RNA28SP | 21 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| exon-exon | CLTA | 9 | - | LUZP6 | 7 | + |
| exon-intron | SNRPA1 | 15 | + | SLC17A1 | 6 | - |
| exon-intron | PPIL2 | 22 | + | ZNF587 | 19 | - |
| intron-exon | LOC107986271 | 4 | - | LOC107986270 | 4 | - |
| intron-exon | MMP25 | 16 | + | ANPEP | 15 | + |
| exon-exon | GPX1 | 3 | + | SLC35B3 | 6 | + |
| exon-exon | PHB2 | 12 | + | BTN3A2 | 6 | - |
| exon-exon | CUL4A | 13 | - | CUL4A | 13 | + |
| exon-exon | NUP98 | 11 | - | DDX10 | 11 | + |
| exon-exon | NUP98 | 11 | - | DDX10 | 11 | + |
| exon-exon | DDX10 | 11 | + | NUP98 | 11 | - |
| exon-exon | DDX10 | 11 | + | NUP98 | 11 | - |
| exon-intron | TMEFF2 | | - | RNR2 | MT | - |
| intron-exon | LUZP2 | 11 | - | ABCB7 | X | - |
| exon-intron | EWSR1 | 22 | + | ETV4 | 17 | - |
| intron-exon | KCNIP4 | 4 | + | FLRT2 | 14 | + |
| exon-exon | ARHGEF40 | 14 | + | TNR | 1 | - |
| exon-exon | SS18 | 18 | - | SSX2B | X | + |
| exon-exon | GNA11 | 19 | - | KCNJ13 | 2 | - |
| exon-intron | PMS2P5 | 7 | + | SPDYE10P | 7 | + |
| exon-exon | LOC107985541 | 22 | + | NEFH | 22 | + |
| intron-exon | GNAS | 20 | - | STK38L | 12 | + |
| intron-exon | ANKMY1 | 2 | - | SIK3 | 11 | - |
| exon-exon | FHL2 | 2 | - | TBC1D8 | 2 | - |
| exon-exon | LINC01123 | 2 | + | MGAT4C | 12 | - |
| exon-intron | FGFR2 | 10 | - | FGFR2 | 10 | + |
| exon-intron | FGFR2 | 10 | - | LOC105378521 | | + |
| exon-exon | FGFR2 | 10 | - | LOC105378521 | | + |
| exon-intron | FGFR2 | 10 | - | LOC105378521 | | + |
| exon-exon | BAZ1B | 7 | - | BAZ1B | 7 | + |
| exon-exon | PDXDC2P-NPIPB14P | 16 | + | BAZ2A | 12 | - |
| intron-exon | JPX | X | + | ATXN7L1 | 7 | - |
| exon-exon | TCL6 | 14 | + | TCL1B | | + |
| exon-intron | TCL6 | 14 | + | TCL1B | | + |
| exon-exon | EIF2AK4 | 15 | - | EIF2AK4 | 15 | + |
| exon-intron | CTTNBP2NL | 1 | + | SEPTIN2 | 2 | + |
| exon-exon | NUP98 | 11 | - | HOXD13 | 2 | + |
| exon-intron | SLC4A10 | 2 | + | LOC105373722 | 2 | - |
| exon-intron | GAL3ST2 | | + | NEU4 | | + |
| exon-exon | RELCH | 18 | - | RELCH | 18 | + |
| exon-exon | NRSN2 | 20 | + | CCDC88C | 14 | - |
| exon-exon | NRGN | 11 | + | HRH3 | 20 | - |
| exon-intron | RESF1 | 12 | + | FAM120C | | - |
| exon-exon | HUWE1 | X | - | ATP5ME | 4 | - |
| intron-exon | NPIPB4 | 16 | - | LHPP | 10 | + |
| intron-exon | SIK3 | 11 | - | TRIOBP | 22 | + |
| exon-intron | SLC7A5P1 | | - | SMG1P5 | 16 | - |
| intron-exon | LOC102724404 | 5 | - | MAML3 | 4 | - |
| exon-exon | FRMPD3 | X | - | FRMPD3 | | + |
| exon-exon | ABCE1 | 4 | + | ATP6V1G2-DDX39B | 6 | - |
| exon-exon | CALD1 | 7 | - | CALD1 | 7 | + |
| exon-exon | IGLV2-14 | 22 | + | IGLL5 | 22 | + |
| exon-exon | IGLV3-1 | 22 | + | IGLL5 | 22 | + |
| exon-intron | IGLV1-40 | 22 | + | IGL | 22 | + |
| exon-exon | IGLV5-45 | 22 | + | IGLL5 | 22 | + |
| exon-exon | CRYZL2P | 1 | - | SEC16B | 1 | - |
| exon-exon | FHAD1-AS1 | 1 | - | FHAD1 | 1 | + |
| exon-intron | BCR | 22 | + | ABL1 | 9 | - |
| intron-exon | SH3TC2 | | - | HTR4 | | - |
| intron-exon | VSIR | 10 | - | ZNF664 | 12 | + |
| exon-exon | RNA45SN3 | 21 | + | CBLB | 3 | - |
| exon-intron | LLCFC1 | | + | KEL | | + |
| exon-exon | KAT6A | 8 | - | ASXL2 | 2 | - |
| exon-exon | USF3 | 3 | - | VRK3 | 19 | - |
| exon-intron | ARHGDIG | 16 | + | PDIA2 | | + |
| intron-exon | JAKMIP1 | 4 | - | FLI1 | 11 | + |
| exon-intron | IGHV3-23 | 14 | - | IGH | 14 | - |
| exon-intron | IGHV3-33 | 14 | - | IGH | 14 | - |
| exon-intron | GRIN2B | | - | AC034268.2 | 17 | + |
| exon-exon | TRIM58 | 1 | + | GSE1 | 16 | + |
| exon-exon | GJA1 | 6 | + | IFT140 | 16 | - |
| exon-intron | RABGGTB | 1 | + | MSH4 | | + |
| intron-exon | SLC35E2A | 1 | - | CDK11A | 1 | - |
| exon-exon | GPC2 | 7 | - | GAL3ST4 | 7 | - |
| exon-intron | CASP9 | 1 | - | CELA2B | | - |
| exon-intron | HLA-DRA | 6 | + | PEX5L | 3 | - |
| intron-exon | QTRT1 | 19 | + | DNM2 | 19 | + |
| exon-exon | SOS2 | 14 | - | SOS2 | 14 | + |
| intron-exon | IGSF11 | 3 | + | PPP2R5B | 11 | + |
| exon-intron | SIK3 | 11 | - | APOA1-AS | 11 | - |
| exon-exon | HAGHL | 16 | + | DHX38 | 16 | + |
| exon-exon | SYNGR1 | 22 | + | TAB1 | | + |
| intron-exon | MAPK12 | 22 | - | HDAC10 | 22 | - |
| intron-exon | PSMB2 | 1 | - | TFAP2E-AS1 | 1 | - |
| exon-intron | DBNL | 7 | + | VDAC2 | 10 | + |
| exon-exon | NAGLU | 17 | + | HIP1R | 12 | - |
| intron-exon | TGFBI | 5 | + | CNPY3 | 6 | + |
| intron-exon | DIXDC1 | 11 | + | MCF2 | X | - |
| exon-intron | TSPAN31 | 12 | + | PAK3 | X | - |
| exon-intron | ZNF134 | | + | ZNF211 | | + |
| exon-exon | POLE | 12 | - | HMGCL | 1 | - |
| exon-intron | MYC | 8 | - | TSPOAP1-AS1 | 17 | + |
| exon-exon | EML4 | 2 | + | ALK | 2 | - |
| exon-exon | IGHJ5 | 14 | - | IGHG4 | 14 | - |
| exon-exon | KIF3C | 2 | - | GIT1 | 17 | - |
| exon-exon | TRAV13-2 | 14 | + | TRAJ42 | 14 | + |
| exon-exon | TRAV41 | 14 | + | TRAJ17 | 14 | + |
| exon-intron | TRAV26-1 | 14 | + | TRA | 14 | + |
| intron-exon | TRB | 7 | + | TRBV19 | | + |
| exon-exon | TRAV38-1 | 14 | + | TRAJ30 | | + |
| exon-exon | TRAV14DV4 | 14 | + | TRAJ47 | 14 | + |
| exon-intron | TRBV10-3 | | + | TRB | 7 | + |
| intron-exon | AC008105.2 | 17 | - | FMNL1 | 17 | - |
| intron-exon | PCSK7 | 11 | - | LOC100652768 | 11 | - |
| intron-exon | AL121718.1 | 6 | - | LOC105377865 | 6 | - |
| exon-exon | LOC105377769 | 5 | + | TRIM7 | 5 | + |
| exon-exon | EML4 | 2 | + | ALK | 2 | - |
| exon-exon | EML4 | 2 | + | ALK | 2 | - |
| exon-exon | EML4 | 2 | + | ALK | 2 | - |
| exon-exon | EML4 | 2 | + | ALK | 2 | - |
| exon-exon | KIF5B | 10 | - | ALK | 2 | - |
| exon-exon | SQSTM1 | 5 | + | ALK | 2 | - |
| exon-exon | PRH1 | 12 | - | PRR4 | 12 | - |
| exon-exon | LOC105374690 | 2 | + | CCDC85A | 2 | + |
| intron-exon | DCPS | 11 | - | TIRAP | | - |
| intron-exon | STRA6 | | + | CCDC33 | 15 | + |
| exon-exon | DHCR24 | 1 | + | DHCR24-DT | | + |
| exon-exon | PPFIBP1 | 12 | + | ALK | 2 | - |
| intron-exon | LOC730183 | 16 | + | SRCAP | 16 | + |
| exon-exon | PJA2 | 5 | - | FER | 5 | + |
| exon-exon | PJA2 | 5 | - | FER | 5 | + |
| exon-exon | PJA2 | 5 | - | FER | 5 | + |
| exon-exon | PJA2 | 5 | - | FER | 5 | + |
| exon-exon | PJA2 | 5 | - | FER | 5 | + |
| exon-exon | CUX1 | 7 | + | RET | 10 | + |
| exon-exon | CCND1 | 11 | + | IGLC7 | 22 | + |
| exon-intron | TRBV9 | 7 | + | TRBJ2-1 | 7 | + |
| exon-intron | TRAV17 | 14 | + | TRA | 14 | + |
| exon-intron | TRAV35 | 14 | + | TRA | 14 | + |
| exon-exon | TRAV5 | | + | TRAJ37 | 14 | + |
| exon-exon | KIF5B | 10 | - | ALK | 2 | - |
| exon-exon | TPM3 | 1 | - | ROS1 | 6 | - |
| exon-exon | SDC4 | 20 | - | ROS1 | 6 | - |
| exon-exon | SLC34A2 | 4 | + | ROS1 | 6 | - |
| exon-exon | CD74 | 5 | - | ROS1 | 6 | - |
| exon-exon | CD74 | 5 | - | ROS1 | 6 | - |
| exon-exon | EZR | 6 | - | ROS1 | 6 | - |
| exon-exon | LRIG3 | 12 | - | ROS1 | 6 | - |
| exon-exon | KIF5B | 10 | - | RET | 10 | + |
| exon-exon | FGFR2 | 10 | - | AHCYL1 | 1 | + |
| exon-exon | CIC | 19 | + | FOXO4 | X | + |
| exon-exon | TRAV14DV4 | 14 | + | TRAJ15 | 14 | + |
| exon-exon | TRAV1-2 | 14 | + | TRAJ39 | 14 | + |
| exon-intron | TRAV12-2 | 14 | + | TRA | 14 | + |
| exon-exon | TRAV19 | 14 | + | TRAV3 | | + |
| exon-exon | TRAC | 14 | - | TRAV26-1 | 14 | + |
| exon-intron | TRAV21 | 14 | + | TRA | 14 | + |
| exon-exon | TRAC | 14 | - | TRAV12-1 | | + |
| exon-exon | TRAV17 | 14 | + | TRAJ26 | 14 | + |
| exon-exon | TRAV13-2 | 14 | + | TRAJ44 | 14 | + |
| exon-intron | TRAV1-2 | 14 | + | TRA | 14 | + |
| exon-exon | TRAV29DV5 | 14 | + | TRAJ45 | 14 | + |
| exon-exon | TRAV1-2 | 14 | + | TRAV9-2 | | + |
| exon-exon | TRAV3 | 14 | + | TRAJ21 | 14 | + |
| exon-exon | TRAV17 | 14 | + | TRAV3 | | + |
| exon-exon | TRAV14DV4 | 14 | + | TRAJ23 | 14 | + |
| exon-exon | TRAV14DV4 | 14 | + | TRAV21 | | + |
| exon-exon | TRAV19 | 14 | + | TRAJ45 | 14 | + |
| exon-exon | TRAV13-2 | 14 | + | TRAJ9 | 14 | + |
| exon-exon | TRAV1-2 | 14 | + | TRAJ5 | 14 | + |
| intron-exon | TRAV25 | 14 | + | TRAJ42 | 14 | + |
| intron-exon | TRAV14DV4 | 14 | + | TRAJ53 | 14 | + |
| exon-exon | TRAC | 14 | - | TRAV1-2 | | + |
| exon-exon | TRAV38-2DV8 | 14 | + | TRAJ58 | 14 | + |
| intron-exon | TRAV12-3 | 14 | + | TRAJ3 | | + |
| exon-exon | TRAC | 14 | - | TRAV14DV4 | | + |
| exon-exon | TRAV14DV4 | 14 | + | TRAJ54 | 14 | + |
| exon-exon | TRAC | 14 | - | TRAV19 | 14 | + |
| exon-intron | TRAV35 | 14 | + | TRA | 14 | + |
| exon-exon | TRAV38-2DV8 | 14 | + | TRAJ26 | 14 | + |
| exon-intron | TRAV38-1 | 14 | + | TRA | 14 | + |
| exon-exon | TRAV35 | 14 | + | TRAJ22 | 14 | + |
| exon-exon | TRAV24 | 14 | + | TRAJ52 | 14 | + |
| exon-exon | TRAC | 14 | - | TRAV27 | | + |
| exon-exon | TRAV2 | 14 | + | TRAJ21 | 14 | + |
| exon-exon | TRAV9-2 | 14 | + | TRAJ54 | 14 | + |
| exon-exon | TRAV12-2 | 14 | + | TRAJ26 | 14 | + |
| exon-intron | TRAV21 | 14 | + | TRA | 14 | + |
| exon-exon | TRAV13-1 | 14 | + | TRAJ30 | | + |
| exon-exon | TRAV24 | 14 | + | TRAJ34 | | + |
| exon-exon | TRAC | 14 | - | TRAV19 | 14 | + |
| exon-exon | TRAV1-1 | 14 | + | TRAJ29 | | + |
| exon-exon | TRAV8-3 | 14 | + | TRAJ4 | 14 | + |
| exon-intron | TRAV21 | 14 | + | TRA | 14 | + |
| exon-exon | TRAV19 | 14 | + | TRAJ12 | 14 | + |
| exon-exon | TRAV1-2 | 14 | + | TRAJ12 | 14 | + |
| exon-intron | TRAV29DV5 | 14 | + | TRA | 14 | + |
| exon-exon | TRAV41 | 14 | + | TRAJ42 | 14 | + |
| exon-exon | TRAV20 | 14 | + | TRAJ57 | 14 | + |
| exon-exon | TRAV26-1 | 14 | + | TRAJ47 | 14 | + |
| exon-intron | TRAV14DV4 | 14 | + | TRA | 14 | + |
| exon-intron | TRAV1-1 | 14 | + | TRA | 14 | + |
| exon-exon | TRAV19 | 14 | + | TRAJ18 | 14 | + |
| exon-exon | TRAV19 | 14 | + | TRAJ42 | 14 | + |
| exon-exon | TRAV21 | 14 | + | TRAJ56 | 14 | + |
| intron-exon | TRAV12-3 | 14 | + | TRAJ52 | 14 | + |
| exon-exon | TRAV19 | 14 | + | TRAV21 | | + |
| exon-exon | TRAV19 | 14 | + | TRAJ24 | | + |
| intron-exon | TRAV1-2 | 14 | + | TRAJ20 | 14 | + |
| exon-exon | TRAV20 | 14 | + | TRAJ15 | 14 | + |
| intron-exon | TRAV25 | 14 | + | TRAJ48 | 14 | + |
| exon-exon | TRAC | 14 | - | TRAV9-2 | | + |
| exon-exon | TRBC2 | 7 | - | TRBV15 | | + |
| exon-exon | TRBC2 | 7 | - | TRBV15 | | + |
| exon-exon | LOC105375541 | 7 | - | TRBV30 | 7 | - |
| exon-intron | TRBV24-1 | | + | TRB | 7 | + |
| exon-intron | TRBV20-1 | 7 | + | TRBJ2-7 | 7 | + |
| exon-exon | TRBC2 | 7 | - | TRBV4-1 | | + |
| exon-exon | TRBC2 | 7 | - | TRBV20-1 | | + |
| exon-exon | TRBC2 | 7 | - | TRBV4-1 | | + |
| intron-exon | TRBC1 | 7 | - | TRBV6-1 | | + |
| exon-exon | TRBC1 | 7 | - | TRBV5-6 | 7 | + |
| intron-exon | TRB | 7 | + | TRBV5-4 | 7 | + |
| exon-exon | TRBC1 | 7 | - | TRBV7-6 | | + |
| exon-exon | TRBC1 | 7 | - | TRBV20-1 | | + |
| exon-exon | TRBC2 | 7 | - | TRBV14 | | + |
| exon-exon | TRBC2 | 7 | - | TRBV5-6 | 7 | + |
| exon-exon | TRBC1 | 7 | - | TRBV24-1 | | + |
| exon-exon | TRBC2 | 7 | - | TRBV19 | | + |
| exon-exon | TRBC1 | 7 | - | TRBV6-7 | | + |
| exon-exon | TRBV20-1 | 7 | + | TRBV15 | | + |
| intron-exon | PRSS1 | 7 | + | TRBJ2-2 | | + |
| exon-exon | TRBV2 | 7 | + | TRBV21-1 | | + |
| exon-exon | TRBJ2-1 | 7 | + | TRBC2 | 7 | + |
| exon-exon | PTPRF | 1 | - | CCN1 | 1 | + |
| exon-exon | RTN1 | 14 | + | DLL1 | 6 | - |
| exon-exon | LILRB1 | 19 | + | LYZ | 12 | + |
| intron-exon | AC145285.4 | | - | PARG | 10 | - |
| intron-exon | TENM4 | 11 | - | NRG1 | 8 | + |
| exon-intron | NUMA1 | 11 | - | RARA | 17 | + |
| exon-intron | AKAP1 | 17 | + | KIAA1671 | 22 | + |
| exon-exon | TRAV35 | 14 | + | TRAJ24 | | + |
| exon-exon | CDC14B | | - | RNA45SN1 | 21 | + |
| exon-exon | UBAC2 | 13 | - | IDH3B | 20 | - |
| exon-exon | ZNF16 | | + | ATP1A1 | 1 | + |
| exon-exon | LOC107986763 | | - | LOC112267992 | | - |
| intron-exon | CD47 | | - | HSP90AA1 | 14 | - |
| intron-exon | BRIX1 | | - | RAD1 | 5 | - |
| exon-exon | TCIRG1 | 11 | - | CNIH1 | 14 | - |
| exon-exon | CCNI | 4 | + | CTSZ | 20 | - |
| exon-intron | MTSS1 | 8 | + | LOC105379516 | 22 | - |
| exon-exon | PNMA1 | 14 | + | PNMA1 | 14 | - |
| exon-intron | UTP14A | X | + | ANKDD1A | 15 | - |
| intron-exon | SYT1 | 12 | - | CDH10 | 5 | - |
| intron-exon | LOC284395 | 19 | + | MID1 | X | - |
| exon-exon | TRAJ16 | 14 | + | TRAC | 14 | + |
| exon-exon | ETV6 | 12 | + | NTRK3 | 15 | - |
| exon-intron | EVI5 | 1 | - | TMEM26 | 10 | + |
| exon-exon | TRBJ2-1 | 7 | + | TRBC2 | 7 | + |
| exon-exon | CXCL8 | 4 | + | ARNT2 | 15 | - |
| intron-exon | IGL | 22 | + | IGLV1-51 | | + |
| exon-exon | IGLV4-69 | 22 | + | IGLV5-37 | 22 | + |
| exon-exon | SLC4A7 | 3 | + | SLC4A7 | 3 | - |
| exon-intron | F2RL3 | | + | CPAMD8 | 19 | + |
| intron-exon | LINC01708 | | + | PIGT | 20 | + |
| intron-exon | LOC112268284 | 21 | - | TLL2 | | - |
| exon-exon | CCNK | 14 | + | ATP13A1 | 19 | - |
| exon-exon | MLLT10 | 10 | + | PICALM | 11 | - |
| exon-exon | MLLT10 | 10 | + | PICALM | 11 | - |
| exon-exon | MLLT10 | 10 | + | PICALM | 11 | - |
| exon-exon | MLLT10 | 10 | + | PICALM | 11 | - |
| exon-exon | PICALM | 11 | - | MLLT10 | 10 | + |
| exon-exon | KMT2A | 11 | + | SEPT5-GP1BB | 22 | + |
| intron-exon | ZNF606 | 19 | + | DGKI | 7 | - |
| intron-exon | GOLT1B | 12 | + | HAO2 | 1 | + |
| exon-exon | CUL4A | 13 | - | TPT1 | 13 | - |
| intron-exon | ARHGEF12 | 11 | - | ND4 | MT | + |
| exon-exon | WASF2 | 1 | + | RPS6 | 9 | - |
| exon-exon | RAMP3 | | + | RPL29 | 3 | - |
| exon-exon | IGLV6-57 | 22 | + | IGLV1-40 | 22 | + |
| exon-exon | TRPC4 | 13 | - | TRPC4 | 13 | + |
| exon-exon | CDC14B | | - | HABP4 | 9 | - |
| exon-exon | CHD3 | 17 | + | ARMCX7P | X | - |
| intron-exon | TMEM108 | 3 | + | CHD3 | 17 | + |
| exon-exon | CDK11A | 1 | - | CDK11B | 1 | - |
| exon-exon | UBAC1 | 9 | + | UBAC1 | 9 | - |
| exon-intron | CLDN11 | 3 | + | NCAM2 | 21 | + |
| exon-exon | NPIPB11 | 16 | + | B2M | 15 | + |
| exon-intron | TPT1 | 13 | - | ATF7IP | 12 | - |
| intron-exon | NID1 | 1 | + | HADHA | 2 | - |
| exon-exon | KPNB1 | 17 | - | LSM4 | 19 | + |
| exon-exon | H19 | 11 | - | LRRC59 | 17 | - |
| exon-exon | RPL31 | 2 | - | RPL6P10 | 4 | + |
| exon-exon | TF | 3 | - | CLDN4 | 7 | - |
| exon-exon | SULT2A1 | 19 | - | SERPINC1 | 1 | - |
| exon-exon | TGFBRAP1 | 2 | + | MYCBP2 | 13 | - |
| exon-exon | PDLIM5 | 4 | + | PDC | 1 | - |
| exon-exon | DDX42 | 17 | - | MT1F | 16 | + |
| exon-exon | RNA45SN3 | 21 | + | SOX18 | | - |
| exon-exon | TPI1 | 12 | - | PFKL | 21 | + |
| exon-exon | ZNF587 | 19 | + | ZNF814 | 19 | + |
| intron-exon | ERBIN | 5 | + | SYNPO2L | 10 | - |
| exon-exon | TRAJ32 | 14 | + | TRAC | 14 | + |
| exon-intron | HEXA | 15 | - | RP11-106M3.2 | 15 | - |
| exon-exon | APOA2 | 1 | + | YOD1 | 1 | - |
| intron-exon | CDC5L | 6 | - | ZNF638 | 2 | + |
| exon-exon | MRPL11 | 11 | + | MRFAP1 | 4 | + |
| intron-exon | R3HDM2 | 12 | + | FTL | 19 | + |
| intron-exon | KLKB1 | | - | FGA | 4 | - |
| exon-exon | IFT57 | 3 | - | ESRRB | 14 | + |
| exon-exon | RNA45SN3 | 21 | - | GABBR2 | | - |
| exon-exon | OR1F1 | | + | ZNF200 | | + |
| exon-intron | IL31RA | 5 | + | KRCC1 | 2 | - |
| exon-exon | UBALD2 | 17 | + | RPL13AP5 | 10 | + |
| exon-exon | RNA45SN1 | 21 | + | EVL | 14 | + |
| intron-exon | REEP3 | 10 | - | ALB | 4 | + |
| intron-exon | AKAP13 | 15 | - | SERPINA1 | 14 | - |
| exon-exon | SLC4A1 | 17 | - | FTL | 19 | + |
| exon-intron | AKAP1 | 17 | + | FAR2 | 12 | + |
| exon-exon | MALAT1 | 11 | + | NASP | 1 | + |
| exon-exon | SELENBP1 | 1 | + | CHURC1-FNTB | 14 | + |
| exon-exon | CDC40 | 6 | + | NDUFA4 | 7 | - |
| exon-exon | ATP2C2-AS1 | 16 | - | ATP2C2 | 16 | + |
| intron-exon | POLR3E | 16 | - | ERGIC3 | 20 | + |
| exon-exon | ALB | 4 | - | SCD | 10 | + |
| intron-exon | SLC35F1 | 6 | - | GTPBP2 | 6 | - |
| intron-exon | TF | 3 | - | ALB | 4 | + |
| exon-intron | INS-IGF2 | 11 | + | FNDC3B | 3 | - |
| exon-exon | IFNGR1 | 6 | + | SLC38A2 | 12 | - |
| intron-exon | KMT5B | 11 | + | PNP | 14 | + |
| exon-exon | HBG2 | 11 | + | MYL4 | | + |
| intron-exon | MATR3 | 5 | - | ALB | 4 | + |
| exon-exon | DNAJC8 | 1 | + | RNASE4 | | + |
| exon-exon | ALB | 4 | - | RPS4Y1 | Y | + |
| intron-exon | RPRD2 | 1 | - | MED12 | X | + |
| exon-exon | LDLR | 19 | + | FUT1 | 19 | + |
| intron-exon | PICALM | 11 | + | TF | 3 | + |
| exon-exon | TMEM200B | 1 | - | SLC43A3 | 11 | - |
| exon-intron | RCHY1 | 4 | + | LEMD3 | | + |
| intron-exon | ZNF536 | 19 | - | ALB | 4 | + |
| exon-exon | PPP1R8 | | - | EEF1A1P9 | 4 | + |
| exon-exon | LOC105369690 | 12 | - | ALB | 4 | + |
| intron-exon | ARHGEF12 | 11 | - | NDUFS1 | | - |
| exon-exon | EIF3K | 19 | - | LATS1 | | - |
| intron-exon | NDUFAF2 | | - | NCCRP1 | | - |
| exon-exon | RSL1D1 | 16 | + | PTPN11 | 12 | + |
| exon-exon | RBP4 | 10 | - | CROCCP3 | 1 | - |
| exon-intron | FTL | 19 | - | LOC105372892 | | + |
| exon-exon | TALAM1 | 11 | - | APOB | 2 | - |
| intron-exon | ADGRG2 | X | - | PSTPIP2 | | - |
| intron-exon | NTM | 11 | + | PRODH | 22 | - |
| exon-exon | RAB1B | 11 | + | NFKBIZ | 3 | - |
| exon-exon | SERPINA1 | 14 | - | AGXT2 | 5 | - |
| exon-exon | CRIPT | 2 | - | ZFP36L1 | 14 | - |
| exon-intron | BVES | 6 | - | LMTK2 | 7 | + |
| exon-exon | TFG | 3 | + | ALK | 2 | - |
| exon-exon | IER3IP1 | 18 | - | IER3IP1 | 18 | + |
| exon-exon | RAB22A | 20 | + | RAB22A | 20 | - |
| exon-exon | NTRK3 | 15 | - | ETV6 | 12 | + |
| exon-exon | AKAP13 | 15 | + | DIPK2A | 3 | - |
| exon-exon | AP3D1 | 19 | - | WIPI2 | 7 | + |
| exon-exon | TRIR | 19 | + | LRRFIP1 | 2 | + |
| intron-exon | CNOT2 | 12 | - | AHSG | 3 | + |
| intron-exon | PSPC1 | 13 | + | PBRM1 | 3 | - |
| exon-exon | BMS1P2-AGAP9 | 10 | + | SERPINA1 | 14 | - |
| intron-exon | KMT2C | 7 | - | TXNDC16 | 14 | - |
| intron-exon | ACTR3 | 2 | - | ALB | 4 | + |
| intron-exon | HMG20A | 15 | - | COL3A1 | 2 | + |
| intron-exon | RGS6 | 14 | - | FN1 | 2 | - |
| intron-exon | SPP2 | 2 | - | HBG2 | 11 | - |
| exon-exon | MFSD14B | 9 | - | SF3B1 | 2 | - |
| exon-intron | ROCK1 | | + | GNA13 | 17 | - |
| exon-exon | PSMA7 | 20 | + | TIMM50 | 19 | + |
| exon-exon | TALAM1 | 11 | - | HDAC3 | 5 | - |
| exon-exon | CYB5B | 16 | - | ALAS2 | X | - |
| exon-intron | PIP4K2B | 17 | - | DGCR5 | 22 | + |
| exon-exon | CCDC103 | 17 | - | NCALD | 8 | - |
| intron-exon | DSCAM | 21 | - | TSTD2 | 9 | - |
| exon-exon | ANAPC16 | 10 | - | ASCC1 | 10 | - |
| exon-exon | TSPAN16 | 19 | + | HADH | 4 | + |
| intron-exon | PCDHGA8 | 5 | + | TMEM258 | 11 | - |
| exon-intron | C17orf67 | 17 | + | DGKE | 17 | + |
| intron-exon | HSFX2 | | + | HSFX1 | | + |
| intron-exon | NEK10 | 3 | - | QKI | 6 | + |
| exon-exon | TFG | 3 | + | ALK | 2 | - |
| exon-intron | RARS2 | 6 | - | LOC105377459 | 4 | - |
| exon-exon | NAP1L1 | 12 | + | CDK5 | | - |
| exon-intron | CNPY3 | 6 | + | CNPY3-GNMT | 6 | + |
| exon-intron | PPIA | 7 | + | RERE | 1 | - |
| exon-exon | RSL1D1 | 16 | + | GLOD4 | 17 | - |
| exon-exon | KMT2D | 12 | + | SUPT16H | 14 | - |
| exon-exon | RPLP0 | 12 | + | NDUFA13 | 19 | + |
| exon-exon | DCTN4 | 5 | + | DCTN4 | 5 | - |
| exon-intron | NOC2L | 1 | - | SAMD11 | | - |
| intron-exon | PCNP | 3 | + | MKRN2 | 3 | + |
| intron-exon | ZMYM2 | 13 | - | TRIP4 | 15 | + |
| intron-exon | LOC105371427 | | - | KCNMB4 | 12 | + |
| exon-exon | ADAM29 | 4 | + | PEG10 | 7 | + |
| exon-exon | FASN | 17 | - | ESR1 | 6 | + |
| intron-exon | MLXIP | 12 | - | TPSG1 | | - |
| exon-exon | KMT2A | 11 | + | AFF1 | 4 | + |
| exon-exon | AFF1 | 4 | + | KMT2A | 11 | + |
| intron-exon | BAG6 | 6 | - | MASTL | 10 | - |
| intron-exon | VPS13D | 1 | + | NSUN5P1 | 7 | + |
| exon-intron | CMIP | 16 | - | C22orf24 | 22 | + |
| exon-exon | CNOT3 | | + | LENG1 | | + |
| intron-exon | KCNH1 | | + | MYOF | 10 | - |
| exon-exon | BCL2L13 | 22 | - | BCL2L13 | 22 | + |
| exon-intron | GPI | 19 | + | FBN1 | 15 | + |
| intron-exon | RP11-544M22.13 | 1 | - | F11R | 1 | - |
| exon-exon | SLC26A4-AS1 | | + | CNTNAP2 | 7 | + |
| exon-intron | BIRC2 | 11 | + | TTC17 | 11 | + |
| exon-intron | ARMCX3 | X | + | CYYR1-AS1 | | - |
| exon-intron | SPTLC2 | 14 | - | RBM6 | 3 | - |
| exon-exon | RAPGEF6 | 5 | - | ND4 | MT | + |
| exon-exon | RNA45SN2 | 21 | + | BACE2 | 21 | + |
| exon-exon | CHST6 | 16 | - | COTL1 | 16 | - |
| intron-exon | FP236383.3 | 21 | - | TRIM9 | 14 | - |
| exon-exon | HAS2 | 8 | - | PLAG1 | 8 | - |
| exon-exon | COL1A2 | 7 | + | PLAG1 | 8 | - |
| intron-exon | NRDE2 | 14 | - | TMIGD3 | 1 | - |
| exon-exon | RBAK | 7 | + | NT5C | 17 | - |
| exon-exon | SPRY4 | 5 | - | NEAT1 | 11 | + |
| intron-exon | NUMA1 | 11 | - | MIOX | 22 | + |
| exon-exon | KMT2A | 11 | + | GAS7 | 17 | - |
| exon-exon | KMT2A | 11 | + | GAS7 | 17 | - |
| exon-exon | KMT2A | 11 | + | KMT2A | 11 | - |
| intron-exon | JAG1 | 20 | + | HOOK3 | 8 | + |
| exon-exon | LOC284685 | 1 | - | PATZ1 | 22 | - |
| exon-exon | STIP1 | | - | MAGI3 | 1 | + |
| exon-exon | SS18 | 18 | - | SSX4B | X | - |
| exon-intron | IGHV4-61 | 14 | - | IGH | 14 | - |
| exon-intron | BOLA2-SMG1P6 | 16 | - | SMG1P6 | 16 | - |
| exon-exon | KMT2A | 11 | + | MLLT10 | 10 | + |
| exon-exon | KMT2A | 11 | + | KMT2A | 11 | - |
| exon-exon | KMT2A | 11 | + | KMT2A | 11 | - |
| exon-exon | KMT2A | 11 | + | KMT2A | 11 | - |
| exon-exon | KMT2A | 11 | + | KMT2A | 11 | - |
| exon-exon | KMT2A | 11 | + | MLLT10 | 10 | + |
| intron-exon | RNR2 | MT | + | RAB18 | 10 | + |
| exon-exon | RNA45SN1 | 21 | + | EP400P1 | 12 | - |
| intron-exon | LOC101926886 | | + | GAP43 | 3 | + |
| exon-intron | IGHJ5 | 14 | - | IGHA1 | 14 | - |
| intron-exon | COX1 | MT | - | UIMC1 | 5 | - |
| exon-exon | MALAT1 | 11 | + | B3GNT2 | 2 | + |
| exon-exon | TCF12 | 15 | + | NR4A3 | 9 | + |
| intron-exon | KATNBL1 | 15 | - | FAM43A | 3 | + |
| exon-intron | HNRNPU | 1 | - | SNRNP25 | 16 | + |
| exon-exon | ND2 | MT | + | COMMD5 | 8 | - |
| intron-exon | MSN | X | + | ALK | 2 | - |
| exon-exon | MSN | X | + | ALK | 2 | - |
| exon-exon | KMT2A | 11 | + | GMPS | 3 | + |
| exon-exon | KMT2A | 11 | + | GMPS | 3 | + |
| intron-exon | RANBP2 | 2 | - | FRA10AC1 | 10 | - |
| intron-exon | TMTC4 | 13 | - | ADGRL3 | 4 | + |
| exon-exon | TPM4 | 19 | + | ALK | 2 | - |
| exon-exon | SLAMF9 | 1 | - | ALG12 | 22 | - |
| exon-exon | CEP43 | 6 | + | TAGAP | 6 | - |
| exon-exon | WRAP73 | 1 | - | TOB2P1 | 6 | - |
| intron-exon | RNF145 | 5 | + | MAN1C1 | 1 | + |
| exon-exon | SLIT3 | 5 | - | MAGED2 | X | + |
| exon-intron | IGKV1D-33 | 2 | + | IGK | 2 | - |
| exon-intron | CSNK2A1 | 20 | - | NFE2L2 | 2 | - |
| exon-exon | TRAJ22 | | + | TRAC | 14 | + |
| exon-intron | EPN1 | 19 | + | VN1R3 | 16 | - |
| intron-exon | POLA2 | 11 | + | FRMD8 | 11 | + |
| exon-exon | L2HGDH | 14 | + | PDGFD | 11 | - |
| exon-exon | CLDN10 | 13 | + | DZIP1 | 13 | + |
| exon-intron | FCRL4 | 1 | - | IGH | 14 | - |
| intron-exon | GRM3 | 7 | - | ABCB1 | 7 | - |
| intron-exon | GRM3 | 7 | - | ABCB1 | 7 | - |
| exon-exon | ND2 | MT | + | DLG5 | 10 | - |
| intron-exon | C4orf45 | 4 | + | TEX101 | 19 | + |
| exon-exon | EXD3 | 9 | - | ZNF276 | 16 | + |
| exon-exon | BCAS4 | 20 | + | BCAS3 | 17 | + |
| intron-exon | CDIN1 | 15 | + | TPM4 | 19 | + |
| intron-exon | RBM15 | 1 | + | MRTFA | 22 | - |
| exon-exon | MRTFA | 22 | - | RBM15 | 1 | + |
| exon-exon | MRTFA | 22 | - | RBM15 | 1 | + |
| exon-intron | CGA | 6 | + | MFSD2A | 1 | + |
| intron-exon | AL391834.3 | 9 | + | ACER2 | 9 | + |
| exon-intron | MMP11 | 22 | - | YKT6 | 7 | + |
| exon-exon | LOC100996724 | | + | HMG20B | 19 | + |
| exon-intron | PSG9 | 19 | + | RPL32P18 | 7 | + |
| exon-intron | KMT2A | 11 | + | MLLT1 | 19 | - |
| intron-exon | MLLT1 | 19 | - | KMT2A | 11 | + |
| exon-exon | MLLT1 | 19 | - | KMT2A | 11 | + |
| intron-exon | SLC12A8 | 3 | + | HEG1 | 3 | - |
| intron-exon | CBFB | 16 | + | MYH11 | 16 | - |
| intron-exon | TFG | 3 | + | ALK | 2 | - |
| exon-exon | TFG | 3 | + | ALK | 2 | - |
| exon-exon | CCDC6 | 10 | - | RET | 10 | + |
| exon-intron | SS18 | 18 | - | SSX1 | X | + |
| exon-intron | TIRAP | | + | HP11014 | | + |
| intron-exon | LOC105375633 | 8 | + | NECAB1 | 8 | + |
| exon-exon | RUNX1 | 21 | - | USP25 | 21 | + |
| exon-intron | NBPF1 | 1 | - | ASIC2 | 17 | + |
| exon-intron | NBPF1 | 1 | - | ASIC2 | 17 | + |
| exon-exon | KMT2A | 11 | + | AFF3 | 2 | - |
| exon-exon | CASP8 | 2 | + | PCGF5 | 10 | + |
| exon-exon | UNC5D | 8 | + | TEX2 | 17 | - |
| exon-exon | SLC44A4 | 6 | - | NEU1 | 6 | - |
| exon-exon | KMT2A | 11 | + | PICALM | 11 | - |
| intron-exon | KMT2A | 11 | + | PICALM | 11 | - |
| exon-intron | PLPP3 | 1 | - | AC119674.2 | | - |
| exon-intron | DUSP19 | 2 | + | AC064871.2 | 2 | + |
| exon-exon | AFF1 | 4 | + | KMT2A | 11 | + |
| exon-exon | PCAT2 | | - | CDKN2B | | - |
| exon-exon | CDK6 | 7 | - | KMT2A | 11 | + |
| exon-exon | KMT2A | 11 | + | AFF1 | 4 | + |
| intron-exon | LOC105376434 | 10 | - | METTL9 | 16 | + |
| exon-intron | TRDV2 | 14 | + | TRD | 14 | + |
| intron-exon | TRG | 7 | - | TARP | | - |
| exon-intron | KMT2A | 11 | + | SEPTIN6 | X | - |
| exon-exon | HLA-DQA1 | 6 | + | HLA-DRA | 6 | + |
| exon-exon | HLA-DQB1 | 6 | - | HLA-DRB1 | 6 | - |
| exon-exon | EWSR1 | 22 | + | NR4A3 | 9 | + |
| exon-intron | BAGE2 | 21 | + | FANK1 | 10 | - |
| exon-exon | BAGE2 | 21 | + | CTBP2P1 | Y | + |
| exon-exon | TRAV12-2 | 14 | + | TRAJ23 | 14 | + |
| exon-exon | TRAV12-2 | 14 | + | TRAJ32 | 14 | + |
| exon-intron | HMGA2 | 12 | + | RAD51B | 14 | + |
| exon-exon | IL1RAPL1 | X | + | DMD | X | - |
| intron-exon | BCR | 22 | + | ABL1 | 9 | + |
| exon-intron | STARD7-AS1 | 2 | + | FSTL4 | 5 | + |
| exon-intron | MYRF | 11 | + | LOC105374914 | 6 | - |
| exon-intron | SV2B | 15 | + | NSD2 | 4 | + |
| exon-intron | LGALS8 | 1 | + | LOC105371742 | 17 | - |
| exon-intron | DCUN1D2 | 13 | - | TTC34 | 1 | - |
| exon-intron | TRDC | 14 | + | TRA | 14 | + |
| intron-exon | RAB11B | 19 | - | SNHG17 | 20 | + |
| exon-intron | CD74 | 5 | + | IL4R | 16 | - |
| exon-exon | TRAM2 | 6 | + | API5 | 11 | - |
| exon-exon | NIN | 14 | + | LOC105370489 | 14 | + |
| intron-exon | TMEM87A | 15 | - | LOC105370795 | 15 | - |
| intron-exon | AL355574.1 | 9 | - | LOC107987141 | 9 | - |
| exon-exon | PTMA | 2 | + | PTMAP2 | 5 | + |
| exon-exon | ZFAND5 | 9 | + | ZFAND5 | 9 | - |
| exon-intron | SBK1 | 16 | - | RFTN1P1 | | + |
| exon-exon | LAPTM4B | 8 | - | LAPTM4B | 8 | + |
| exon-exon | FTL | 19 | - | NFE2L2 | 2 | - |
| exon-exon | NMNAT2 | 1 | + | C1orf61 | 1 | + |
| exon-exon | PSMC1P1 | 3 | + | ARHGDIA | 17 | + |
| exon-exon | PRXL2A | 10 | - | TMEM14C | 6 | - |
| exon-intron | ND1 | MT | - | ADCY1 | 7 | - |
| exon-intron | NADK2 | 5 | + | ITSN1 | 21 | - |
| intron-exon | C1QTNF3 | 5 | - | EPB41L3 | 18 | + |
| exon-exon | SPARC | 5 | + | SPARC | 5 | - |
| exon-exon | HADHB | 2 | - | AHSA1 | 14 | - |
| exon-exon | ATMIN | 16 | + | EIF4E2 | 2 | + |
| exon-exon | VGLL4 | 3 | + | ATG7 | 3 | + |
| exon-exon | PLPPR3 | 19 | - | TALAM1 | 11 | - |
| exon-exon | RWDD4 | 4 | + | RWDD4P2 | 7 | - |
| exon-exon | REEP1 | 2 | + | STXBP1 | 9 | - |
| exon-exon | SPIN1 | 9 | - | SPIN1 | 9 | + |
| exon-intron | CNNM2 | 10 | + | BRD2 | 6 | - |
| exon-exon | COL2A1 | 12 | + | COL2A1 | 12 | - |
| exon-exon | TNNT2 | 1 | + | CPSF7 | 11 | + |
| exon-exon | ND4 | MT | - | INVS | 9 | - |
| exon-exon | CT75 | 2 | - | GSG1 | 12 | + |
| intron-exon | TSHR | 14 | + | STON2 | 14 | + |
| intron-exon | NCOA2 | 8 | + | GPI | 19 | - |
| exon-intron | DCAF5 | 14 | + | SS18 | 18 | + |
| exon-exon | LOC105370265 | 13 | + | LOC105370269 | 13 | + |
| exon-exon | ATXN7L1 | 7 | + | CDHR3 | 7 | + |
| exon-intron | GNAI1 | 7 | - | LOC728755 | 14 | + |
| exon-intron | LOC101927039 | 8 | - | UQCRB | 8 | - |
| intron-exon | LOC105377177 | 3 | + | LINC02050 | 3 | + |
| exon-exon | SCCPDH | 1 | - | TCF3 | 19 | + |
| intron-exon | OCIAD1 | 4 | + | SH3GLB2 | 9 | + |
| exon-intron | IRAK1 | X | + | MECP2 | X | + |
| intron-exon | AC008915.2 | 16 | - | COG7 | 16 | - |
| exon-exon | ND3 | MT | - | TRAPPC13 | 5 | - |
| intron-exon | RPL36A-HNRNPH2 | X | - | DSP | 6 | - |
| intron-exon | RAI14 | 5 | + | FBXW2 | 9 | + |
| exon-intron | SFR1 | 10 | - | ENTPD1-AS1 | 10 | - |
| exon-exon | CWC25 | 17 | + | LINC01061 | 4 | + |
| exon-exon | LOC112268450 | 3 | + | PSMC1P7 | 3 | + |
| intron-exon | WNT5B | 12 | + | HIPK3 | 11 | - |
| exon-exon | TNFAIP2 | 14 | - | EIF1 | 17 | + |
| exon-exon | HYOU1 | 11 | + | MTCH1 | 6 | + |
| exon-exon | NOX1 | X | - | CSTF2 | X | - |
| exon-intron | LOC105376158 | 9 | + | AL392185.1 | 9 | + |
| exon-exon | TRIM24 | 7 | - | NTN4 | 12 | + |
| exon-exon | EIF3D | 22 | + | EIF3D | 22 | - |
| exon-intron | CDKN1C | 11 | + | PLXDC2 | 10 | - |
| exon-exon | LTBP3 | 11 | + | RAP1GAP2 | 17 | - |
| exon-exon | PRDM4 | 12 | + | LOC101929162 | 12 | + |
| intron-exon | NFE2L2 | 2 | + | CSAD | 12 | + |
| exon-exon | GRN | 17 | - | ST6GAL1 | 3 | - |
| exon-exon | CHD6 | 20 | + | RNA45SN3 | 21 | - |
| exon-exon | APOA1 | 11 | + | APOA1-AS | 11 | + |
| exon-exon | PIGBOS1 | 15 | + | GHR | 5 | - |
| exon-intron | APOA1 | 11 | + | APOA1-AS | 11 | + |
| intron-exon | FUS | 16 | - | METTL9 | 16 | - |
| exon-intron | MRC1 | 10 | - | MYO1D | 17 | + |
| intron-exon | LOC283038 | 10 | - | COPA | 1 | - |
| exon-intron | NECTIN2 | 19 | - | ADAMTS12 | 5 | + |
| exon-intron | CNN2 | 19 | - | RPS29 | 14 | - |
| exon-exon | PPIA | 7 | - | SLC35B1 | 17 | + |
| exon-exon | CALM2 | 2 | - | B3GNT5 | 3 | + |
| exon-intron | SPDYE2 | 7 | + | POLR2J2 | 7 | + |
| intron-exon | DIPK1A | 1 | - | MINK1 | 17 | - |
| intron-exon | CENPP | 9 | + | OGN | 9 | - |
| exon-exon | PEBP1 | 12 | - | PICALM | 11 | + |
| exon-intron | ND1 | MT | - | TLN1 | 9 | - |
| exon-exon | NSD3 | 8 | + | SYVN1 | 11 | + |
| exon-intron | ECH1 | 19 | + | FTCD | 21 | + |
| exon-exon | LOC112268127 | 14 | - | SERPINA5 | 14 | - |
| exon-intron | SOX11 | 2 | + | AC108025.2 | 2 | + |
| exon-intron | USP32P1 | 17 | - | CCDC144A | 17 | - |
| intron-exon | ATG10 | 5 | + | YWHAQ | 2 | + |
| exon-exon | APOC1 | 19 | - | APOC1 | 19 | + |
| exon-exon | UBL7 | 15 | + | HSPA5 | 9 | + |
| exon-exon | NONO | X | - | HMGN1 | 21 | + |
| exon-intron | NINJ1 | 9 | + | USP2-AS1 | 11 | + |
| exon-exon | TGFBR3L | 19 | - | C1orf35 | 1 | + |
| exon-exon | ERP27 | 12 | + | SPTA1 | 1 | + |
| exon-intron | RAB11B | 19 | - | RRBP1 | 20 | + |
| exon-intron | CIAO1 | 2 | - | ITPR1 | 3 | - |
| exon-exon | GNB5 | 15 | + | RBM15 | 1 | - |
| exon-exon | AK3 | 9 | + | BAG6 | 6 | + |
| exon-intron | ZBTB7A | 19 | + | DKK2 | 4 | + |
| exon-exon | SUPT6H | 17 | - | APOB | 2 | + |
| exon-intron | LINC01145 | 1 | + | FCN2 | 9 | - |
| intron-exon | CPN1 | 10 | - | CSF1R | 5 | + |
| exon-exon | BMERB1 | 16 | - | LARP1B | 4 | - |
| exon-exon | TIAL1 | 10 | + | DKK3 | 11 | - |
| exon-exon | BACH2 | 6 | + | TPT1 | 13 | - |
| exon-exon | ND5 | MT | - | RPS23P8 | X | + |
| exon-exon | INS-IGF2 | 11 | - | ALDOB | 9 | - |
| intron-exon | SLC2A1 | 1 | + | COX1 | MT | + |
| intron-exon | SLC9A9 | | + | COX3 | MT | + |
| exon-intron | INS-IGF2 | 11 | + | C4B | 6 | + |
| exon-intron | STAG1 | 3 | - | RABGEF1 | 7 | + |
| intron-exon | USP32 | 17 | + | HMGB1 | 13 | - |
| exon-exon | APOA2 | 1 | + | PNP | 14 | + |
| intron-exon | ZNF518A | | - | HBG2 | 11 | - |
| exon-exon | HNRNPA1P10 | 19 | + | COX2 | MT | + |
| intron-exon | RABGAP1L | 1 | - | ALB | 4 | + |
| exon-exon | RPS20 | 8 | + | PLPP3 | 1 | - |
| exon-exon | PPP1CC | 12 | + | CENPF | 1 | + |
| intron-exon | ADORA2A-AS1 | | + | ST6GAL1 | 3 | + |
| exon-intron | ATP6 | MT | + | GPC6 | 13 | + |
| exon-exon | PEBP1 | 12 | - | STOM | 9 | - |
| exon-exon | PJA2 | 5 | + | ND1 | MT | + |
| exon-exon | HBA1 | 16 | - | GATA1 | X | + |
| exon-exon | DEFA1B | 8 | + | APOA2 | 1 | - |
| intron-exon | LRRC8C | 1 | - | HBB | 11 | - |
| intron-exon | MACF1 | 1 | - | SRSF3 | 6 | + |
| exon-exon | LOC105369690 | 12 | - | CMAS | 12 | - |
| exon-intron | ND3 | MT | - | SOX6 | 11 | - |
| exon-exon | ITIH3 | 3 | + | SPTLC1 | 9 | - |
| exon-exon | ND4 | MT | - | NDUFA4 | 7 | - |
| exon-exon | ALB | 4 | - | TF | 3 | + |
| exon-exon | RNF10 | 12 | - | RNF10 | 12 | + |
| exon-exon | SCNN1D | 1 | - | LINC01786 | 1 | - |
| exon-exon | MT2A | 16 | - | RNA45SN3 | 21 | - |
| intron-exon | IQCG | 3 | - | RPL35AP21 | 9 | + |
| exon-intron | UBA7 | 3 | + | MIR5193 | 3 | + |
| exon-exon | FBXO34 | 14 | - | SSRP1 | 11 | + |
| exon-intron | GINM1 | 6 | - | AL078581.2 | 6 | - |
| intron-exon | SLC27A4 | 9 | - | PRKCSH | 19 | - |
| intron-exon | SLC12A5-AS1 | 20 | - | MMP9 | 20 | - |
| exon-exon | RPS8 | 1 | - | COPG2 | 7 | + |
| exon-exon | RPS27A | 2 | - | SPAG5 | 17 | + |
| intron-exon | AL592429.2 | 6 | - | LOC107986651 | 6 | - |
| exon-intron | MBP | 18 | - | AC093330.1 | 18 | - |
| exon-intron | HABP2 | 10 | + | KIFBP | 10 | - |
| exon-exon | CYTB | MT | - | COX1 | MT | - |
| exon-exon | C1orf112 | 1 | + | HSP90AA1 | 14 | + |
| intron-exon | RAB7A | 3 | - | LOC101927556 | 16 | + |
| intron-exon | NUDCD3 | 7 | - | LMCD1 | 3 | - |
| intron-exon | LUC7L2 | 7 | - | CHD2 | 15 | - |
| exon-exon | TMEM234 | 1 | - | CCDC28B | 1 | - |
| exon-exon | PPARA | 22 | - | AP2M1 | 3 | - |
| exon-exon | CDC42 | 1 | + | CDC42 | 1 | - |
| exon-exon | DDB1 | 11 | + | S100A11 | 1 | + |
| exon-exon | DBNL | 7 | - | ATOX1 | 5 | - |
| exon-exon | ARID4B | 1 | - | DDX21 | 10 | + |
| exon-exon | F2R | 5 | - | AFMID | 17 | - |
| exon-intron | CALR | 19 | + | RNR2 | MT | - |
| exon-exon | HSPA8 | 11 | + | RNF24 | 20 | + |
| exon-exon | PDLIM7 | 5 | + | UPF1 | 19 | - |
| intron-exon | PC | 11 | - | SLC9A8 | 20 | - |
| intron-exon | CCDC175 | 14 | - | JKAMP | 14 | - |
| intron-exon | PIGK | 1 | + | RPL17P6 | 1 | + |
| exon-exon | TPT1 | 13 | + | PRDX1 | 1 | - |
| exon-exon | PCGF1 | 2 | + | IFITM2 | 11 | - |
| exon-exon | TMEM259 | 19 | + | TMEM259 | 19 | - |
| exon-exon | SCP2 | 1 | - | PJA2 | 5 | + |
| exon-exon | PPDPF | 20 | - | RNA45SN3 | 21 | - |
| exon-exon | ARRDC2 | 19 | + | FBXO32 | 8 | - |
| exon-exon | TMBIM4 | 12 | + | KAT2B | 3 | - |
| exon-exon | TAGLN3 | 3 | - | KDM3B | 5 | - |
| intron-exon | GRPEL2-AS1 | 5 | - | GRPEL2 | 5 | + |
| exon-exon | USP16 | 21 | - | PRDX1 | 1 | + |
| intron-exon | LOC100128006 | 17 | - | KLF3 | 4 | - |
| exon-exon | RTN4RL2 | 11 | - | DAZAP1 | 19 | - |
| exon-intron | SPDYE2 | 7 | + | SPDYE2B | 7 | + |
| exon-exon | TUBB2B | 6 | + | RNA45SN1 | 21 | - |
| exon-exon | MRPS18B | 6 | - | HIGD1A | 3 | + |
| intron-exon | STX12 | 1 | - | ACADSB | 10 | - |
| exon-exon | SLC1A3 | 5 | - | TIMP2 | 17 | + |
| exon-exon | SLC25A39 | 17 | + | MRPL55 | 1 | - |
| exon-exon | RACK1 | 5 | + | SNX11 | 17 | - |
| exon-exon | MFGE8 | 15 | + | MFGE8 | 15 | - |
| intron-exon | LOC112268284 | 21 | - | MGAT4B | 5 | + |
| exon-exon | PRSS23 | 11 | - | SPRY4 | 5 | + |
| exon-exon | PLP2 | X | - | STC2 | 5 | + |
| exon-exon | CHRNE | 17 | - | MINK1 | 17 | - |
| exon-intron | RHOB | 2 | - | SYN3 | 22 | - |
| exon-exon | USP5 | 12 | - | ILRUN | 6 | + |
| exon-exon | DHRS4L2 | 14 | - | DHRS4 | 14 | - |
| intron-exon | TPM1 | 15 | - | SKP2 | 5 | - |
| intron-exon | LOC102724066 | 16 | - | RPSAP58 | 19 | + |
| exon-exon | STAT6 | 12 | - | NAB2 | 12 | - |
| exon-exon | MTREX | 5 | + | PLPP1 | 5 | + |
| exon-exon | FTLP3 | 20 | + | PSMC3 | 11 | - |
| intron-exon | NPPA-AS1 | 1 | + | RNA45SN3 | 21 | - |
| exon-exon | FAU | 11 | + | EIF1 | 17 | - |
| exon-exon | UBQLN1 | 9 | + | LOC105376114 | 9 | + |
| exon-exon | SGK1 | 6 | + | IGFBP4 | 17 | - |
| exon-exon | RPS23 | 5 | + | ATXN7L3 | 17 | + |
| intron-exon | ZNF587 | 19 | + | ZNF814 | 19 | + |
| exon-exon | ADAMTSL5 | 19 | + | RN7SL3 | 14 | + |
| exon-exon | GAS1 | 9 | + | RNA45SN1 | 21 | - |
| exon-exon | RNA45SN2 | 21 | - | KCNE5 | X | + |
| exon-exon | GYS1 | 19 | + | HSPA14 | 10 | - |
| exon-exon | CAV2 | 7 | + | FAM189B | 1 | - |
| exon-intron | RPL7P9 | 1 | + | FNDC1 | 6 | - |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| intron-exon | SYCE1L | 16 | - | MON1B | 16 | - |
| exon-exon | COL6A2 | 21 | - | CAND2 | 3 | - |
| exon-exon | DAXX | 6 | + | VAPB | 20 | - |
| intron-exon | PTGER4 | 5 | + | HAGLR | 2 | + |
| intron-exon | GNA13 | 17 | + | PHF21A | 11 | - |
| intron-exon | KIAA2026 | 9 | - | GMCL1 | 2 | - |
| exon-exon | DAD1 | 14 | + | YWHAE | 17 | + |
| exon-intron | PARGP1-AGAP4 | 10 | + | AGAP4 | 10 | + |
| exon-intron | FTLP3 | 20 | - | RNF24 | 20 | - |
| exon-exon | EML6 | 2 | + | RTN4 | 2 | + |
| exon-intron | UQCRHL | 1 | + | PTPRC | 1 | - |
| exon-exon | COX7A2L | 2 | + | LPIN1 | 2 | - |
| exon-intron | KCNK6 | 19 | - | RPS14 | 5 | + |
| exon-exon | RPSAP58 | 19 | - | CILP | 15 | + |
| exon-intron | NRDC | 1 | + | LOC105378721 | 1 | + |
| exon-exon | GYS1 | 19 | + | CPXM1 | 20 | + |
| exon-exon | YWHAE | 17 | + | CTDSP2 | 12 | + |
| exon-exon | ZDHHC24 | 11 | - | RFC2 | 7 | + |
| exon-exon | WWP1 | | + | AZIN1 | 8 | + |
| exon-exon | TUG1 | 22 | - | PPIB | 15 | - |
| exon-exon | SLC20A2 | 8 | + | CYB5A | 18 | - |
| intron-exon | SOX5 | 12 | + | HBG1 | 11 | - |
| intron-exon | RNR2 | MT | - | FGB | 4 | + |
| intron-exon | XPO7 | 8 | - | YWHAE | 17 | - |
| exon-exon | H19 | 11 | - | RPL12 | 9 | - |
| exon-intron | C3 | 19 | - | MT1G | 16 | - |
| exon-exon | MRC2 | 17 | + | YBX3 | 12 | - |
| intron-exon | LOC107984026 | 10 | - | P2RX4 | 12 | + |
| exon-intron | COX3 | MT | - | ATP6 | MT | + |
| exon-exon | C4A | 6 | - | GAPDH | 12 | + |
| exon-exon | SERPINA1 | 14 | + | PSMD2 | 3 | + |
| intron-exon | LINC01478 | | + | COX1 | MT | - |
| exon-exon | RPS16 | 19 | + | FGA | 4 | - |
| intron-exon | NSL1 | | + | HAT1 | 2 | + |
| intron-exon | BBS9 | | - | PSMC1P1 | | + |
| exon-exon | SCD | 10 | - | PTMA | 2 | + |
| intron-exon | EIF2AK3 | 2 | + | UGT2B4 | 4 | - |
| exon-exon | STK38L | 12 | + | ALB | 4 | + |
| intron-exon | DNAJB1 | 19 | + | A2M | 12 | - |
| exon-exon | NEAT1 | 11 | - | HBG2 | 11 | - |
| exon-exon | MSL3 | X | - | ALB | 4 | + |
| exon-intron | FGG | 4 | - | RNF157 | | - |
| exon-exon | COX1 | MT | - | FTL | 19 | + |
| exon-exon | ND5 | MT | - | PDAP1 | 7 | - |
| intron-exon | L3MBTL4 | | - | LMLN | 3 | - |
| exon-exon | GOT1 | 10 | + | FABP1 | 2 | - |
| exon-intron | LIPC | 15 | - | SMIM14 | 4 | - |
| exon-exon | ND1 | MT | + | HEATR1 | 1 | - |
| intron-exon | RNR2 | MT | - | VTN | 17 | - |
| intron-exon | GPHN | 14 | + | STX12 | 1 | + |
| intron-exon | SLC22A10 | | + | PRG4 | 1 | + |
| exon-exon | SEC62 | 3 | + | COX1 | MT | + |
| exon-exon | ND3 | MT | - | POLR2B | 4 | + |
| intron-exon | SMOC1 | 14 | + | GALNT2 | 1 | + |
| exon-exon | SNX6 | 14 | - | HERC1 | 15 | - |
| intron-exon | FBXW8 | 12 | - | RANBP2 | 2 | + |
| exon-intron | RERE | 1 | - | IRAG2 | 12 | + |
| exon-exon | MEG3 | 14 | - | MAF | 16 | + |
| exon-exon | SRSF6 | 20 | - | HMBOX1 | 8 | - |
| exon-intron | NUCB1 | 19 | - | TASP1 | 20 | + |
| exon-intron | HSPB1 | 7 | - | DDX17 | 22 | + |
| exon-exon | ROBO3 | 11 | - | SCARB1 | 12 | + |
| intron-exon | PLD3 | 19 | + | DVL1 | | + |
| intron-exon | UNC13A | 19 | - | RNF149 | 2 | - |
| exon-intron | MARK2 | 11 | + | RHOA | 3 | - |
| intron-exon | TBC1D10B | 16 | - | NAPB | 20 | + |
| exon-exon | RNA45SN3 | 21 | + | TMED4 | 7 | - |
| intron-exon | NFASC | 1 | - | MAZ | 16 | + |
| intron-exon | LINC-PINT | 7 | + | YWHAG | 7 | + |
| exon-intron | SENP8 | 15 | + | AC020779.2 | 15 | + |
| intron-exon | HOXB6 | 17 | - | HOXB3 | 17 | - |
| intron-exon | AC011396.2 | 5 | + | LOC105378213 | 5 | + |
| exon-exon | LOC105379316 | 8 | + | LINC02153 | 8 | + |
| exon-exon | RPLP0 | 12 | + | ZKSCAN1 | 7 | - |
| exon-exon | RHOB | 2 | - | UBE2D3P1 | 20 | + |
| intron-exon | MAPRE1 | 20 | + | EFCAB8 | 20 | + |
| intron-exon | AC005699.1 | 4 | - | LOC107986178 | 4 | - |
| intron-exon | CELA2B | 1 | + | CASP9 | 1 | + |
| exon-exon | SUMF1 | 3 | + | SUMF1 | 3 | - |
| exon-intron | PSPHP1 | 7 | - | LANCL2 | 7 | - |
| exon-exon | RNA45SN2 | 21 | + | GET1-SH3BGR | 21 | + |
| exon-exon | DNPH1 | 6 | + | P3H4 | 17 | - |
| intron-exon | LOC107984029 | 10 | + | PBXIP1 | 1 | - |
| exon-exon | BCL2L1 | 20 | + | SORT1 | 1 | + |
| exon-exon | PUDP | X | + | SSR3 | 3 | + |
| exon-exon | KIF1C | 17 | - | VCL | 10 | - |
| exon-exon | ATP6V0C | 16 | - | FAM98A | 2 | + |
| exon-intron | SEPTIN2 | 2 | - | RNA28SP | 21 | - |
| exon-intron | UBN2 | 7 | - | HIVEP3 | 1 | + |
| exon-exon | TBL1X | X | - | TBL1X | X | + |
| exon-exon | CAPN1 | 11 | - | RNA45SN2 | 21 | - |
| exon-exon | KRTDAP | 19 | + | RBMX | X | - |
| intron-exon | TBX1 | 22 | - | CUL9 | 6 | - |
| exon-exon | LGALS3 | 14 | - | ATG12 | 5 | + |
| intron-exon | AK8 | 9 | + | RALGDS | 9 | + |
| exon-exon | HBA2 | 16 | - | NFE2L1 | 17 | - |
| exon-exon | IGF2BP2 | | + | TF | 3 | + |
| exon-exon | ASXL1 | 20 | - | HBG2 | 11 | - |
| exon-intron | ND5 | MT | + | AHSP | | - |
| exon-exon | ND2 | MT | - | ACTR2 | 2 | + |
| intron-exon | TSC22D4 | 7 | - | CYTB | MT | + |
| intron-exon | AC010522.1 | 19 | + | FTL | 19 | + |
| intron-exon | ANP32B | 9 | + | ND4 | MT | + |
| intron-exon | RNR1 | MT | - | NRSN2 | 20 | + |
| exon-exon | CYTB | MT | - | CENPF | 1 | + |
| intron-exon | TRNL1 | MT | - | TF | 3 | + |
| exon-intron | CDR1 | X | - | ST7 | 7 | + |
| exon-exon | COX1 | MT | - | MSRA | 8 | + |
| exon-exon | COX1 | MT | - | ACAA1 | 3 | - |
| intron-exon | MTND2P28 | 1 | - | DERL2 | 17 | - |
| intron-exon | CPS1 | 2 | - | COX1 | MT | + |
| exon-intron | RPL4 | 15 | + | LARGE1 | 22 | - |
| exon-exon | ANKRD28 | 3 | + | LMNB1 | 5 | + |
| intron-exon | SNTB1 | 8 | - | EFR3A | 8 | + |
| exon-exon | EEF1A1P13 | 5 | - | EEF1A1P12 | 2 | + |
| intron-exon | STRBP | 9 | + | UBB | 17 | + |
| intron-exon | MIPEPP3 | 13 | + | HBB | 11 | - |
| intron-exon | PRC1-AS1 | | + | ND1 | MT | + |
| exon-exon | COX1 | MT | + | PTPN11 | 12 | - |
| intron-exon | GTF2E2 | 8 | + | GALE | | - |
| exon-exon | SART1 | 11 | - | ITIH4 | 3 | - |
| intron-exon | LOC101928042 | 15 | - | NREP | 5 | - |
| exon-exon | AHSG | 3 | - | CD74 | 5 | - |
| intron-exon | CLIP2 | 7 | - | CEBPA | 19 | - |
| exon-exon | INS-IGF2 | 11 | - | HBG2 | 11 | - |
| intron-exon | GFI1B | | - | TBCD | 17 | - |
| exon-exon | CLK3 | 15 | + | ITIH4 | 3 | - |
| intron-exon | ZNF37BP | | + | RPS24 | 10 | + |
| exon-intron | SERPINA6 | | + | SPCS2 | 11 | + |
| exon-exon | SAMD9 | 7 | + | GCLM | 1 | - |
| exon-exon | RTN3 | 11 | - | EDEM1 | 3 | + |
| exon-exon | CYTB | MT | + | TMEM134 | 11 | - |
| exon-exon | OSMR | 5 | - | FGG | 4 | - |
| intron-exon | RBM26 | 13 | - | TMBIM6 | 12 | + |
| exon-exon | VAV2 | 9 | - | PSMD1 | 2 | + |
| exon-exon | ALB | 4 | + | ZDHHC2 | 8 | + |
| intron-exon | LINC02192 | | + | ND1 | MT | + |
| intron-exon | CYP4F2 | | + | ND4 | MT | + |
| exon-exon | TTR | 18 | - | TPT1 | 13 | - |
| intron-exon | ITPR2 | 12 | + | EIF5 | 14 | + |
| intron-exon | MALRD1 | 10 | - | ATM | 11 | + |
| exon-exon | TOMM6 | 6 | - | TOMM6 | 6 | + |
| exon-exon | COX3 | MT | + | HINT2 | | - |
| exon-exon | ND2 | MT | + | ND1 | MT | + |
| intron-exon | DDAH1 | 1 | - | LOC646626 | 1 | - |
| exon-intron | PRXL2A | 10 | - | FOXN3 | 14 | + |
| intron-exon | LOC105378316 | 10 | - | TFAM | 10 | - |
| exon-exon | LOC107985584 | 22 | + | BCRP2 | 22 | + |
| exon-exon | PJA2 | 5 | + | OXLD1 | 17 | + |
| exon-exon | RNASE4 | 14 | - | ANXA2 | 15 | + |
| intron-exon | LOC101928295 | 19 | - | DKKL1 | 19 | - |
| exon-exon | SNX33 | 15 | - | PROS1 | 3 | + |
| intron-exon | ZNF805 | 19 | - | TOR1AIP2 | 1 | + |
| exon-exon | TPMT | 6 | + | TYW1 | 7 | - |
| intron-exon | SLC27A4 | 9 | - | AMBRA1 | 11 | + |
| exon-exon | DCXR | 17 | + | CALM1 | 14 | - |
| exon-exon | BMERB1 | 16 | - | PNCK | X | + |
| exon-exon | MRM2 | 7 | + | COL3A1 | 2 | - |
| exon-intron | RHCG | 15 | + | ITGA6-AS1 | 2 | - |
| exon-exon | CST3 | 20 | + | CST3 | 20 | - |
| exon-exon | PARP14 | 3 | - | KIRREL1 | 1 | - |
| exon-exon | PSMC4 | 19 | - | WNT7B | 22 | - |
| exon-exon | RPS19 | 19 | - | ARHGEF2 | 1 | + |
| exon-exon | CKAP4 | 12 | + | HBG2 | 11 | - |
| exon-intron | EEF1A1P6 | 7 | + | PAPSS1 | 4 | + |
| exon-exon | LOC112268127 | 14 | - | SERPINA5 | 14 | + |
| intron-exon | ST20-MTHFS | 15 | + | ST20-AS1 | 15 | + |
| intron-exon | SLC27A4 | 9 | - | PKM | 15 | + |
| intron-exon | TPRKB | 2 | + | DMGDH | 5 | + |
| exon-exon | TUBB3 | 16 | - | IGFBP7 | 4 | + |
| exon-exon | SLC30A6 | 2 | - | UGGT1 | 2 | - |
| exon-exon | SIRT6 | 19 | + | SDC3 | 1 | + |
| exon-intron | ADAMTS4 | 1 | + | LOC102724485 | 16 | + |
| exon-exon | KRT18 | 12 | - | PLAGL1 | 6 | - |
| exon-exon | PPIA | 7 | - | COX1 | MT | - |
| intron-exon | LOC102030688 | X | - | IRAK1 | X | - |
| intron-exon | AC005154.5 | 7 | + | GARS1-DT | 7 | + |
| exon-exon | MIR202HG | 10 | + | MYO7A | 11 | - |
| exon-intron | BRDT | 1 | - | PRRX1 | 1 | - |
| exon-exon | RNA45SN1 | 21 | - | BCL9 | 1 | + |
| intron-exon | LOC112268426 | 2 | + | CXCR4 | 2 | + |
| exon-exon | YPEL1 | 22 | - | PPIL2 | 22 | - |
| exon-exon | DDX24 | 14 | + | RNF185 | 22 | + |
| exon-intron | TMED10 | 14 | + | THSD4 | 15 | + |
| exon-exon | ATP6V1G2-DDX39B | 6 | + | DHCR24 | 1 | + |
| exon-intron | DEGS1 | 1 | + | CDC73 | 1 | + |
| exon-exon | TRIOBP | 22 | - | KPNB1 | 17 | + |
| intron-exon | NPEPPS | 17 | + | LOC112268184 | 17 | + |
| intron-exon | WDR47 | 1 | - | CXCL12 | 10 | + |
| intron-exon | RNA28SP | 21 | - | RNA45SN2 | 21 | - |
| exon-intron | KCNH3 | 12 | + | LRCH3 | 3 | - |
| exon-exon | RNPC3 | 1 | - | TTC37 | 5 | + |
| exon-exon | AGO1 | 1 | - | AGO1 | 1 | + |
| exon-exon | SF3B1 | 2 | + | SF3B1 | 2 | - |
| exon-exon | PHKA1 | X | + | PHKA1 | X | - |
| exon-exon | COX2 | MT | - | RPS8 | 1 | + |
| intron-exon | FCHSD2 | 11 | - | TERF2IP | 16 | + |
| intron-exon | ATRN | 20 | - | PKD1P1 | 16 | + |
| exon-exon | H19 | 11 | - | HBG2 | 11 | - |
| exon-exon | ALB | 4 | - | ITGA1 | 5 | + |
| intron-exon | SNHG14 | 15 | + | ARPC2 | 2 | - |
| exon-exon | LOC730021 | 3 | - | FTLP3 | 20 | + |
| exon-exon | AHSG | 3 | - | ALB | 4 | + |
| exon-intron | NDUFA6 | 22 | + | RNR2 | MT | + |
| exon-exon | ATP6 | MT | - | AURKB | | - |
| exon-exon | RUNDC1 | 17 | - | NDUFB9 | 8 | + |
| intron-exon | GC | 4 | + | GC | 4 | - |
| exon-intron | TALAM1 | 11 | - | STK4 | 20 | - |
| exon-exon | TALAM1 | 11 | - | CYTB | MT | + |
| intron-exon | SORBS1 | 10 | - | ND2 | MT | - |
| exon-exon | CRTAP | 3 | - | FGG | 4 | - |
| exon-exon | COX2 | MT | - | HBG2 | 11 | - |
| exon-intron | KCTD9 | 8 | - | ARL15 | 5 | - |
| intron-exon | KDM4C | 9 | - | H19 | 11 | - |
| intron-exon | AIMP2 | 7 | + | FTL | 19 | + |
| intron-exon | PCBP1-AS1 | | + | ZCRB1 | 12 | - |
| exon-exon | NCL | 2 | + | ALB | 4 | - |
| exon-exon | APOB | 2 | + | HBG1 | 11 | - |
| exon-intron | TUBB1 | | + | CAGE1 | 6 | - |
| intron-exon | LCP1 | 13 | - | ARL17B | 17 | - |
| exon-exon | GABPA | 21 | - | ALB | 4 | + |
| exon-exon | CD83 | 6 | - | MALAT1 | 11 | + |
| exon-exon | RPL5 | 1 | + | ALB | 4 | + |
| exon-intron | CFLAR | 2 | - | FAM107B | 10 | + |
| exon-exon | CCT7 | 2 | - | MOSPD3 | 7 | - |
| exon-exon | RNA45SN2 | 21 | - | GTF3C6 | 6 | - |
| exon-exon | RPS4X | X | + | NTHL1 | 16 | - |
| intron-exon | LOC112268268 | 20 | + | SLC25A31 | 4 | - |
| exon-intron | ACOT2 | 14 | - | HEATR4 | 14 | - |
| exon-exon | HBM | 16 | - | HBM | 16 | + |
| exon-intron | OGFRL1 | 6 | + | AL136164.2 | 6 | + |
| exon-intron | TLR6 | 4 | + | TMEM156 | 4 | + |
| exon-exon | PCNP | 3 | + | CKB | 14 | + |
| exon-intron | BBIP1 | 10 | - | RNASEH2B | 13 | - |
| exon-exon | CACNA1H | 16 | - | COL6A2 | 21 | - |
| exon-exon | COL6A1 | 21 | + | FTH1 | 11 | - |
| exon-intron | NME1-NME2 | 17 | - | CD74 | 5 | + |
| exon-exon | RNA45SN1 | 21 | + | PHB2 | 12 | - |
| exon-intron | MANSC1 | 12 | + | PARVB | 22 | + |
| exon-exon | ATP5MC2 | 12 | + | EEF2 | 19 | + |
| exon-exon | PKD1 | 16 | + | RNA45SN1 | 21 | - |
| exon-exon | TUBB | 6 | - | TUBB | 6 | + |
| intron-exon | LOC105371082 | 16 | + | SEPTIN2 | 2 | - |
| exon-exon | CGB3 | 19 | + | TPT1P9 | 9 | - |
| exon-exon | LONP2 | 16 | - | GNA13 | 17 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| exon-exon | RPL14 | 3 | - | RPL41 | 12 | + |
| exon-exon | PSMA2 | 7 | + | RALB | 2 | - |
| exon-exon | COL1A2 | 7 | - | TCF4 | 18 | + |
| exon-exon | CYB5D2 | 17 | - | HSPA5 | 9 | + |
| exon-intron | KLHL40 | 3 | - | TMEM139-AS1 | 7 | - |
| exon-exon | CRYBB2P1 | 22 | - | RBMS2 | 12 | - |
| intron-exon | PPM1F | 22 | - | POLR3A | 10 | + |
| exon-intron | PSPC1 | 13 | - | PSPC1-AS2 | 13 | - |
| intron-exon | SYN1 | X | - | ALDOC | 17 | + |
| exon-intron | NDUFA4L2 | 12 | + | LOC112163617 | 12 | + |
| intron-exon | LOC105372521 | 20 | - | PLCB1 | 20 | - |
| intron-exon | ADAMTS6 | 5 | + | SNHG16 | 17 | + |
| intron-exon | AC112493.1 | X | + | LOC105373150 | X | + |
| exon-exon | KXD1 | 19 | - | UFC1 | 1 | - |
| intron-exon | FP236315.3 | 21 | + | LOC107987323 | 22 | - |
| exon-exon | TUBA1A | 12 | + | SNRNP27 | 2 | - |
| exon-intron | LOC112268219 | 1 | + | HPRT1 | X | + |
| exon-intron | MYCBPAP | 17 | - | G3BP2 | 4 | - |
| intron-exon | LOC105370765 | 15 | + | LOC441722 | 15 | + |
| exon-exon | BRICD5 | 16 | - | MLST8 | 16 | - |
| exon-exon | HIGD1B | 17 | + | GFAP | 17 | + |
| intron-exon | HNRNPUL2-BSCL2 | 11 | + | NRSN2 | 20 | - |
| exon-exon | NDRG2 | 14 | + | BAG6 | 6 | + |
| intron-exon | AL121894.1 | 20 | + | LOC105372573 | 20 | + |
| intron-exon | LOC105369351 | 11 | - | LOC105369352 | 11 | - |
| exon-exon | PLPPR3 | 19 | - | PTBP1 | 19 | - |
| exon-exon | ZFPM1 | 16 | - | RNA45SN3 | 21 | - |
| intron-exon | LAMTOR4 | 7 | - | GHITM | 10 | - |
| exon-exon | LOC105377730 | 5 | - | LOC401218 | 5 | - |
| exon-intron | LRCH4 | 7 | + | AL513478.4 | 9 | + |
| exon-exon | C1orf21 | 1 | + | ANKLE2 | 12 | - |
| exon-exon | TVP23A | 16 | - | NUBP1 | 16 | - |
| intron-exon | SYS1-DBNDD2 | 20 | - | PSMD2 | 3 | - |
| exon-exon | RPL10A | 6 | - | ITGB5 | 3 | + |
| exon-exon | FIBP | 11 | + | RNA45SN2 | 21 | - |
| exon-exon | TFAP2C | 20 | - | UVSSA | 4 | - |
| exon-intron | COL14A1 | 8 | - | WASHC5 | 8 | + |
| exon-exon | POLR2J | 7 | + | DLGAP4 | 20 | - |
| exon-intron | SNX32 | 11 | + | NTRK2 | 9 | - |
| exon-intron | HMGCL | 1 | + | VPS37B | 12 | + |
| exon-intron | HP1BP3 | 1 | + | EIF4G3 | 1 | + |
| intron-exon | GUSBP14 | 5 | + | NAF1 | 4 | + |
| exon-exon | EML3 | 11 | + | DGKA | 12 | - |
| exon-exon | CBX5 | 12 | + | HFM1 | 1 | + |
| exon-intron | LOC101927039 | 8 | - | UQCRB | 8 | - |
| exon-intron | ESF1 | 20 | + | NDUFAF5 | 20 | + |
| exon-exon | PHKB | 16 | - | HES1 | 3 | - |
| intron-exon | RBM39 | 20 | + | MKLN1 | 7 | + |
| exon-intron | FBXL18 | 7 | + | CHRM3 | 1 | - |
| exon-exon | ATL1 | 14 | - | PMPCB | 7 | + |
| intron-exon | RABEP1 | 17 | + | EIF4G1 | 3 | - |
| intron-exon | AHCTF1 | 1 | + | ZNF431 | 19 | - |
| exon-exon | IQCD | 12 | + | CASC3 | 17 | - |
| exon-intron | ADAM18 | 8 | - | DDHD2 | 8 | + |
| intron-exon | AL021154.1 | 1 | + | LOC105376859 | 1 | + |
| exon-intron | NDUFS2 | 1 | - | BAZ1B | 7 | + |
| exon-intron | GLB1L | 2 | + | SLC8A1-AS1 | 2 | + |
| exon-exon | CYTB | MT | + | ND4 | MT | + |
| intron-exon | TNKS | 8 | - | ATF7IP | 12 | + |
| exon-intron | EIF3A | 10 | - | SLCO1B1 | 12 | + |
| intron-exon | TRAM1 | 8 | + | RAP1A | 1 | + |
| exon-intron | ALB | 4 | + | PCNP | 3 | - |
| exon-intron | CFB | 6 | + | PARN | 16 | - |
| exon-exon | ASGR2 | 17 | + | BLOC1S1-RDH5 | 12 | + |
| exon-exon | RALBP1 | 18 | - | RALBP1 | 18 | + |
| exon-intron | DEFA1 | | - | RNF115 | 1 | + |
| intron-exon | UBAC2 | 13 | - | SNHG29 | 17 | + |
| exon-intron | FGG | 4 | - | TSPAN5 | 4 | + |
| exon-exon | ALB | 4 | - | CBR1 | 21 | + |
| intron-exon | CDK19 | 6 | + | USP14 | 18 | + |
| intron-exon | EZH2 | 7 | + | ATP2A2 | 12 | + |
| intron-exon | MARCHF1 | | - | HSPA5 | 9 | - |
| exon-exon | INS-IGF2 | 11 | + | RNPS1 | 16 | - |
| exon-exon | ALAS2 | X | + | ALB | 4 | + |
| exon-exon | MAGT1 | X | + | SERPINA1 | 14 | - |
| intron-exon | RNR2 | MT | - | EEF1A1 | 6 | - |
| exon-exon | ZFPL1 | | - | APOA1 | | - |
| exon-exon | PHB2 | 12 | - | COL3A1 | 2 | + |
| exon-exon | INS-IGF2 | 11 | + | UBC | 12 | - |
| exon-exon | DHCR24 | 1 | + | B4GALT5 | 20 | - |
| intron-exon | ZYG11B | 1 | + | ALB | 4 | + |
| exon-exon | ND3 | MT | - | MALAT1 | 11 | + |
| intron-exon | LOC106099065 | 11 | + | RBP4 | 10 | - |
| intron-exon | NCAM2 | 21 | - | ILF2 | 1 | - |
| intron-exon | BACH2 | 6 | + | APOA2 | 1 | - |
| intron-exon | EIF3E | 8 | - | PIKFYVE | | + |
| exon-exon | APOA2 | 1 | + | SND1 | 7 | + |
| intron-exon | CREBBP | 16 | + | RIOK3 | 18 | + |
| exon-exon | TEAD3 | | + | ATP6 | MT | + |
| exon-exon | UPF1 | 19 | - | CACNA1A | 19 | + |
| exon-exon | NR2F2 | 15 | - | MRTO4 | 1 | + |
| exon-intron | PSMA3-AS1 | 14 | - | FOXJ3 | 1 | - |
| intron-exon | DLGAP4-AS1 | 20 | - | ZNF227 | 19 | - |
| exon-exon | GABARAPL1 | 12 | - | GIGYF2 | 2 | - |
| exon-exon | MOSMO | 16 | + | LOC105371129 | 16 | + |
| exon-exon | IGLL5 | 22 | - | PDCD4-AS1 | 10 | + |
| intron-exon | ABR | 17 | + | DUX4L50 | 9 | - |
| exon-intron | SUGP2 | 19 | + | GATAD2A | 19 | + |
| exon-intron | LOC100129484 | 7 | - | AC092171.4 | 7 | - |
| exon-intron | SOD1 | 21 | - | RRP8 | | + |
| intron-exon | PTGR1 | 9 | - | ZNF483 | 9 | - |
| exon-exon | MRPL14 | 6 | + | MRPL14 | 6 | - |
| exon-exon | LINC01620 | 20 | + | PAFAH2 | 1 | + |
| exon-exon | MXD3 | 5 | + | EME2 | 16 | - |
| exon-exon | CAVIN3 | 11 | + | LOC101927825 | 11 | + |
| exon-intron | MARK3 | 14 | - | LOC101929290 | 8 | - |
| exon-intron | HEXIM1 | 17 | + | AC002117.1 | 17 | + |
| exon-intron | CNPY2 | 12 | - | AC073896.1 | 12 | - |
| exon-exon | BFAR | 16 | - | SRSF5 | 14 | - |
| exon-exon | RNA45SN1 | 21 | + | FTH1 | 11 | - |
| exon-intron | RIOK1 | 6 | - | PIGL | 17 | - |
| exon-exon | RPLP1 | 15 | - | PASK | 2 | + |
| exon-intron | SBDS | 7 | + | DNAH8 | 6 | + |
| exon-intron | SPCS1 | 3 | - | NTM | 11 | + |
| exon-exon | RPL32 | 3 | - | CAND2 | 3 | - |
| intron-exon | CCDC178 | 18 | - | LOC105372058 | 18 | - |
| exon-intron | MTNR1B | 11 | - | AP003171.1 | 11 | - |
| exon-exon | BPHL | 6 | - | BPHL | 6 | + |
| exon-intron | LOC105371349 | 16 | + | AC099511.1 | 16 | + |
| exon-exon | PPIA | 7 | - | HNRNPH3 | 10 | + |
| exon-exon | RPS27A | 2 | - | LOC107984466 | 12 | + |
| exon-intron | FAM238B | 10 | - | RORA | 15 | + |
| exon-intron | FLJ39095 | 1 | + | OFD1P6Y | Y | + |
| exon-intron | DUSP19 | 2 | + | AC064871.2 | 2 | + |
| exon-intron | KRTCAP2 | 1 | + | PRMT2 | 21 | - |
| exon-exon | SAR1A | 10 | + | NDC1 | 1 | + |
| intron-exon | AL121574.1 | 6 | + | LOC107986593 | 6 | + |
| exon-exon | EIF2AK1 | 7 | - | AIMP2 | 7 | - |
| exon-intron | CD74 | 5 | + | UBAC2 | 13 | - |
| exon-exon | GNAL | 18 | + | FMO5 | 1 | - |
| exon-intron | SLC7A8 | 14 | + | SCNN1A | 12 | + |
| exon-exon | PEBP1 | 12 | - | PEBP1 | 12 | + |
| exon-exon | CLCNKB | 1 | - | CLCNKA | 1 | - |
| exon-intron | RPS15P4 | 2 | + | ITPK1 | 14 | + |
| exon-exon | RNA45SN3 | 21 | + | MDGA1 | 6 | + |
| intron-exon | AC087664.1 | 8 | + | LOC105375860 | 8 | + |
| exon-exon | NDFIP1 | 5 | - | NDFIP1 | 5 | + |
| exon-intron | RPL21P16 | 10 | + | CALML4 | 15 | + |
| exon-exon | CKAP2 | 13 | - | RNA45SN1 | 21 | - |
| exon-exon | USP4 | 3 | + | ETS1 | 11 | + |
| exon-exon | C5orf60 | 5 | + | PANK3 | 5 | + |
| exon-exon | SLC35A4 | 5 | - | NUMA1 | 11 | + |
| exon-exon | PPDPF | 20 | - | CHST11 | 12 | + |
| exon-intron | H2AX | 11 | + | ATG12 | 5 | + |
| exon-exon | PLPPR3 | 19 | - | PTBP1 | 19 | - |
| exon-exon | GPR155 | 2 | + | BCKDHB | 6 | - |
| exon-exon | CYP4A11 | 1 | + | RNA45SN2 | 21 | - |
| intron-exon | KB-1930G5.4 | 8 | + | CALR | 19 | - |
| intron-exon | CAV1 | 7 | + | COMETT | 7 | + |
| exon-intron | LINC01731 | 1 | + | LINC01138 | 1 | - |
| intron-exon | AL133342.1 | 20 | + | LOC105372648 | 20 | + |
| exon-intron | EMC3 | 3 | - | AC018809.2 | 3 | - |
| intron-exon | KIF11 | 10 | - | MARCHF5 | 10 | - |
| exon-intron | OAF | 11 | - | AUTS2 | 7 | - |
| intron-exon | MAP3K13 | 3 | - | TALAM1 | 11 | - |
| intron-exon | C11orf80 | 11 | + | C1QBP | 17 | - |
| intron-exon | C9orf139 | 9 | + | NPDC1 | 9 | + |
| exon-exon | RPL28 | 19 | - | LOC105374445 | 4 | - |
| exon-exon | MAP4 | 3 | + | MYO1B | 2 | - |
| exon-intron | SFXN3 | 10 | - | TNIK | 3 | + |
| exon-intron | RPL14 | 3 | + | NBEAP3 | 22 | + |
| exon-exon | ADAM19 | 5 | + | EEF1A1P5 | 9 | + |
| intron-exon | LINC01060 | 4 | + | LOC105377609 | 4 | + |
| exon-exon | AK4 | 1 | - | ALDOB | 9 | - |
| exon-exon | LOC107986287 | 4 | - | LINC02499 | 4 | - |
| intron-exon | PKP4-AS1 | 2 | - | PKP4 | 2 | - |
| exon-exon | TCF4 | 18 | + | LIPA | 10 | + |
| exon-intron | RPL7A | 9 | - | RNR1 | MT | - |
| intron-exon | TSPAN16 | 19 | + | RSF1 | 11 | + |
| exon-intron | VSNL1 | 2 | + | LRP1B | 2 | - |
| exon-exon | NDRG4 | 16 | - | NDRG4 | 16 | + |
| exon-intron | PPP1CA | 11 | - | UBE2H | 7 | - |
| exon-intron | PAX3 | 2 | + | LOC107985991 | 2 | + |
| exon-exon | USP49 | 6 | + | MED20 | 6 | + |
| exon-exon | LOC107984019 | 11 | + | ZNF215 | 11 | + |
| exon-intron | CD180 | 5 | + | CCDC149 | 4 | + |
| exon-exon | TDG | | + | ND4 | MT | + |
| exon-exon | PTPN18 | 2 | + | PTPN18 | 2 | - |
| exon-exon | UBC | 12 | + | ND1 | MT | - |
| exon-exon | FBXO7 | 22 | + | FBXO7 | 22 | - |
| exon-exon | SPNS2 | 17 | - | KLF5 | 13 | - |
| exon-exon | PXDC1 | 6 | - | PXDC1 | 6 | + |
| exon-intron | LOC105375027 | 6 | + | LOC105375026 | 6 | + |
| exon-exon | FXYD3 | 19 | - | ZNF202 | 11 | + |
| exon-intron | LDLRAD2 | 1 | + | LOC105373000 | 22 | - |
| exon-exon | RPS21 | 20 | - | PIAS3 | 1 | + |
| exon-intron | MIOS | 7 | - | AC004982.2 | 7 | - |
| exon-intron | ZMYM5 | 13 | + | PELP1 | 17 | + |
| exon-intron | ADGRL2 | 1 | - | TTN-AS1 | 2 | + |
| exon-exon | VPS37A | 8 | - | VCAM1 | 1 | - |
| exon-exon | PSMD4 | 1 | - | SUSD6 | 14 | - |
| exon-exon | LOC112268079 | 11 | + | LINC02761 | 11 | + |
| exon-exon | C19orf48 | 19 | + | DCTN5 | 16 | - |
| exon-exon | COL1A1 | 17 | + | GRAP2 | 22 | - |
| exon-intron | TRIP6 | 7 | - | ENSA | 1 | + |
| exon-exon | ELK3 | 12 | - | GRK6 | 5 | - |
| exon-exon | NASP | 1 | - | IGFBP5 | 2 | + |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN1 | 21 | + |
| exon-exon | CCNL2 | 1 | + | EPB41L2 | 6 | + |
| intron-exon | RPL15P3 | 6 | - | NHSL1 | 6 | + |
| exon-exon | NCBP3 | 17 | - | LRPAP1 | 4 | - |
| exon-exon | SERPINF1 | 17 | - | PSMB8 | 6 | + |
| exon-intron | STRN3 | 14 | - | LINC00299 | 2 | + |
| exon-exon | GBP2 | 1 | + | ETS2 | 21 | - |
| exon-intron | ND3 | MT | - | RFC3 | 13 | + |
| exon-exon | CFB | 6 | - | CFB | 6 | + |
| exon-exon | NTF3 | 12 | - | RPS25 | 11 | + |
| exon-intron | ND3 | MT | - | PCDH11X | X | - |
| exon-intron | TMEM176A | 7 | - | ZNF407 | 18 | - |
| exon-exon | C6orf89 | 6 | - | C6orf89 | 6 | + |
| exon-exon | HLA-A | 6 | - | EPAS1 | 2 | - |
| intron-exon | BAD | 11 | + | GPR137 | 11 | + |
| exon-intron | TM2D1 | 1 | - | ZNF532 | 18 | - |
| exon-intron | GRINA | 8 | - | NAV2 | 11 | - |
| exon-exon | NDUFA4 | 7 | + | ELOVL5 | 6 | + |
| intron-exon | IGH | 14 | + | IGHG1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG2 | 14 | + |
| intron-exon | TJP1 | 15 | + | C6orf118 | 6 | + |
| exon-exon | RPL18 | 19 | + | KIAA1191 | 5 | + |
| exon-exon | TSNAXIP1 | 16 | - | GPSM1 | 9 | - |
| exon-exon | DZIP1 | 13 | + | DNAH17 | 17 | + |
| exon-intron | ZDHHC3 | 3 | + | C2orf72 | 2 | - |
| exon-exon | ND4 | MT | - | MAN2A1 | 5 | - |
| exon-intron | LOC102724775 | 11 | + | PRSS23 | 11 | + |
| intron-exon | ANXA4 | 2 | - | SOD2 | 6 | + |
| exon-exon | CEP68 | 2 | - | CFLAR | 2 | - |
| exon-exon | DDTL | 22 | + | AKAP13 | 15 | - |
| exon-intron | EP300 | 22 | - | CDK5RAP1 | 20 | + |
| exon-exon | INS-IGF2 | 11 | + | MYH3 | 17 | + |
| intron-exon | ASPH | 8 | - | DDX19A | 16 | + |
| exon-exon | FTL | 19 | - | TYRO3 | 15 | - |
| exon-intron | HMGA1 | 6 | + | STAG3L5P-PVRIG2P-PILRB | 7 | + |
| exon-exon | PHF3 | 6 | - | PHF3 | 6 | + |
| exon-exon | PLEKHA5 | 12 | + | CUL2 | 10 | - |
| exon-exon | NFIC | 19 | - | VSTM4 | 10 | + |
| exon-exon | IGLL5 | 22 | - | FN3K | 17 | - |
| exon-intron | CBX5 | 12 | - | LOC107984525 | 12 | - |
| exon-exon | RGS10 | 10 | - | HMGN1 | 21 | - |
| exon-exon | FGFR4 | 5 | - | TALAM1 | 11 | - |
| exon-exon | COMT | 22 | - | COMT | 22 | + |
| exon-exon | PEX19 | 1 | + | EIF2D | 1 | - |
| exon-exon | FAM222B | 17 | + | FAM222B | 17 | - |
| exon-exon | FBXO11 | 2 | + | LOC100506235 | 2 | + |
| exon-exon | PTK2B | 8 | - | RPL11 | 1 | - |
| exon-intron | AHNAK | 11 | + | ATP1A1-AS1 | 1 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | LOC105369370 | 11 | - |
| exon-exon | RPL13AP25 | 13 | + | EIF4HP1 | 7 | + |
| intron-exon | LOC101927473 | 7 | - | LOC105375392 | 7 | - |
| exon-exon | CIRBP | 19 | - | CIRBP | 19 | + |
| intron-exon | RNR1 | MT | - | EZH1 | 17 | + |
| exon-exon | VAMP2 | 17 | + | CFAP20 | 16 | - |
| exon-exon | AXL | 19 | - | FAM168B | 2 | + |
| exon-exon | EIF3H | 8 | + | ACSL5 | 10 | - |
| exon-exon | LRRC75A | 17 | - | RNA45SN2 | 21 | - |
| exon-intron | MGST3 | 1 | + | TENT4A | 5 | + |
| exon-exon | C3 | 19 | + | ALB | 4 | + |
| exon-exon | MAFG | 17 | + | ANXA6 | 5 | + |
| exon-intron | CCT8 | 21 | + | GPHN | 14 | + |
| exon-intron | TANGO2 | 22 | - | LOC105375660 | | + |
| exon-exon | PIM3 | 22 | - | ATP5MC2 | 12 | + |
| exon-exon | MARK2 | 11 | - | ALDOC | 17 | + |
| intron-exon | SOS2 | 14 | - | GNE | 9 | + |
| exon-intron | LTO1 | 11 | + | FRMD4A | 10 | + |
| exon-exon | TPI1P1 | 1 | - | PPP2R1A | 19 | - |
| intron-exon | PSMD14 | 2 | + | SMIM7 | 19 | + |
| exon-exon | INPP5K | 17 | - | FBXO34 | 14 | + |
| exon-intron | LINC01503 | 9 | - | TGM2 | 20 | + |
| exon-intron | MTHFD1L | 6 | - | CKMT2-AS1 | 5 | - |
| exon-exon | GAPDH | 12 | - | CIRBP | 19 | - |
| exon-intron | COX8A | 11 | - | RNA28SP | 21 | - |
| exon-exon | TPT1 | 13 | + | SUCO | 1 | - |
| exon-exon | TPT1 | 13 | + | SUCO | 1 | - |
| exon-exon | MYH7 | 14 | + | GYS1 | 19 | + |
| intron-exon | GBE1 | 3 | - | XPO4 | 13 | + |
| exon-exon | WASHC4 | 12 | - | VPS41 | 7 | + |
| exon-intron | PTMS | 12 | - | DDX17 | 22 | + |
| exon-intron | SPCS3 | 4 | - | LOC105370032 | 12 | - |
| exon-exon | AP2M1 | 3 | - | PTK7 | 6 | - |
| exon-exon | SHMT1 | 17 | + | RNA45SN2 | 21 | - |
| exon-exon | RACK1 | 5 | + | FN1 | 2 | + |
| exon-exon | BRD8 | 5 | + | HLA-DRA | 6 | - |
| intron-exon | RPAP1 | 15 | - | RAD54L | 1 | - |
| exon-exon | INHA | 2 | - | RNA45SN1 | 21 | - |
| exon-exon | COX6C | 8 | + | AFF4 | 5 | + |
| intron-exon | EBF3 | 10 | - | YWHAZ | 8 | + |
| exon-exon | CSP3 | 19 | - | SUPT16H | 14 | + |
| exon-exon | FHL3 | 1 | + | APOA2 | 1 | - |
| exon-exon | RGMA | 15 | + | SFTPC | 8 | + |
| exon-exon | ACTB | 7 | + | MEF2C | 5 | + |
| exon-exon | MRPS15 | 1 | + | RNA45SN1 | 21 | - |
| exon-intron | FAAHP1 | 1 | - | CIB1 | 15 | + |
| exon-exon | POLD2 | 7 | + | TTC28 | 22 | + |
| exon-intron | GATAD1 | 7 | - | DNAH2 | 17 | - |
| exon-intron | RPS4X | X | + | BTD | 3 | + |
| intron-exon | PPM1F | 22 | - | FAM32A | 19 | - |
| exon-exon | TAGLN3 | 3 | - | SNRPD2 | 19 | - |
| intron-exon | LOC100996737 | 1 | - | ARHGAP19-SLIT1 | 10 | + |
| exon-intron | NAPEPLD | 7 | - | STX16-NPEPL1 | 20 | - |
| intron-exon | IGH | 14 | + | RNA45SN1 | 21 | - |
| exon-exon | EIF4A1P13 | 7 | + | COPG1 | 3 | - |
| exon-exon | RNA45SN1 | 21 | + | MAN2C1 | 15 | - |
| exon-exon | VAT1 | 17 | + | HNRNPA1P48 | 16 | - |
| exon-exon | GET3 | 19 | - | GANAB | 11 | + |
| exon-exon | SCNN1D | 1 | - | LINC01786 | 1 | - |
| exon-intron | MAGED2 | X | - | LOC105372275 | 19 | + |
| exon-exon | PLA2G12A | 4 | + | SOGA1 | 20 | - |
| exon-intron | LOC112268127 | 14 | - | PPP6R2 | 22 | - |
| exon-intron | EEPD1 | 7 | - | RNA28SP | 21 | - |
| exon-intron | LOC105375423 | 7 | - | SLC49A4 | 3 | - |
| exon-exon | PUDP | X | + | LYZ | 12 | - |
| exon-intron | GPI | 19 | - | NUDT6 | 4 | - |
| intron-exon | MIR762HG | 16 | + | TSC22D1 | 13 | + |
| exon-exon | KLF12 | 13 | + | KLF12 | 13 | - |
| exon-exon | SLA2 | 20 | - | RAB5IF | 20 | - |
| exon-exon | HDGFL3 | 15 | + | HDGFL3 | 15 | - |
| intron-exon | TAF15 | 17 | + | PEX19 | 1 | + |
| exon-intron | GON4L | 1 | - | LOC105371452 | 1 | - |
| exon-intron | GON4L | 1 | - | LOC105371452 | 1 | - |
| exon-exon | S100A16 | 1 | + | HTATSF1 | X | - |
| exon-exon | RPL12 | 9 | + | RNA45SN1 | 21 | - |
| exon-exon | RPL32 | 3 | + | CA12 | 15 | + |
| exon-exon | TLN1 | 9 | + | KCTD12 | 13 | + |
| intron-exon | TMEM213 | 7 | - | SASH1 | 6 | - |
| exon-exon | RPS19 | 19 | - | VKORC1L1 | 7 | - |
| intron-exon | KCNQ1-AS1 | 11 | - | KCNQ1 | 11 | - |
| exon-exon | CITED4 | 1 | + | BIN2 | 12 | + |
| exon-intron | PPP1R3B | 8 | + | GATA2 | 3 | + |
| exon-exon | LRP2 | 2 | + | RNA45SN2 | 21 | - |
| intron-exon | CLCA4 | 1 | + | CLCA3P | 1 | + |
| intron-exon | POLR2J4 | 7 | - | UBE2D4 | 7 | - |
| exon-intron | PYCARD | 16 | + | PYCARD-AS1 | 16 | + |
| exon-exon | TYSND1 | 10 | + | CAPZB | 1 | + |
| exon-exon | H2BU1 | 1 | - | SMG7 | 1 | - |
| exon-intron | SAPCD2 | 9 | - | AL807752.2 | 9 | - |
| exon-exon | RPS2 | 16 | + | NPAS2 | 2 | - |
| exon-intron | KLK1 | 19 | + | PDE3A | 12 | - |
| intron-exon | TBC1D8 | 2 | - | RPL31 | 2 | - |
| exon-exon | STARD3NL | 7 | - | STARD3NL | 7 | + |
| exon-exon | POLDIP3 | 22 | + | POLDIP3 | 22 | - |
| exon-intron | PNISR | 6 | + | OSBPL2 | 20 | - |
| exon-exon | LIMD2 | 17 | - | MAP3K3 | 17 | - |
| exon-intron | LOC101927391 | 7 | + | GRIP1 | 12 | + |
| intron-exon | GON4L | 1 | + | MSTO1 | 1 | + |
| intron-exon | DGUOK-AS1 | 2 | - | CFLAR | 2 | - |
| exon-intron | CXXC5 | 5 | - | SMYD3 | 1 | + |
| exon-exon | CDK2AP2 | 11 | + | PFDN5 | 12 | - |
| exon-exon | SAMD4B | 19 | - | IRF3 | 19 | + |
| exon-intron | COL1A1 | 17 | + | RNA18SP5 | 21 | - |
| exon-exon | UBR4 | 1 | + | COL1A1 | 17 | - |
| intron-exon | PSMA3 | 14 | + | HMGB1P14 | 14 | + |
| intron-exon | ANKDD1A | 15 | + | ILF3 | 19 | - |
| exon-exon | NOLC1 | 10 | - | RPL14 | 3 | - |
| exon-intron | LINC00960 | | - | LINC01844 | | - |
| intron-exon | ANKDD1A | 15 | + | ITM2B | 13 | - |
| exon-intron | MALAT1 | 11 | - | SERPINI1 | | - |
| exon-intron | CIAPIN1 | 16 | + | LOC105369670 | | + |
| exon-exon | IRF2 | 4 | + | EMP1 | 12 | + |
| exon-exon | PKD1P5-LOC105376752 | 16 | + | APOL3 | 22 | + |
| exon-intron | RSL1D1 | 16 | + | MAGI2 | 7 | + |
| exon-exon | GNAS | 20 | - | GNAS | 20 | + |
| intron-exon | INVS | 9 | + | BSG | 19 | - |
| exon-exon | ATXN3 | 14 | + | THSD7A | 7 | + |
| exon-exon | NKAPD1 | 11 | + | TIMM8B | 11 | - |
| exon-exon | UBB | 17 | - | UBBP4 | | + |
| exon-exon | KCNAB1 | 3 | + | KIF3B | 20 | - |
| exon-intron | CACNB3 | 12 | - | LOC112268284 | 21 | - |
| intron-exon | CAST | 5 | + | ERAP1 | 5 | + |
| exon-exon | ARVCF | 22 | + | PCBP2 | 12 | - |
| exon-exon | KPTN | 19 | + | PSKH1 | 16 | - |
| exon-intron | BRAF | 7 | + | SPAG5-AS1 | 17 | + |
| exon-exon | TOMM7 | 7 | + | DDX41 | 5 | + |
| exon-intron | SERPINB1 | 6 | + | FAM71E1 | 19 | + |
| intron-exon | AL139125.1 | 10 | + | LINC02642 | 10 | + |
| intron-exon | TTC16 | 9 | + | TOR2A | 9 | + |
| intron-exon | ATPSCKMT | 5 | - | CCT5 | 5 | - |
| exon-exon | CERS1 | 19 | + | GDF1 | 19 | + |
| exon-exon | RPLP0 | 12 | + | ZNF853 | 7 | - |
| exon-exon | DYNLL2 | 17 | - | TAPBPL | 12 | - |
| exon-exon | MAPK9 | 5 | + | ITPR1 | 3 | - |
| intron-exon | AC105052.1 | 7 | + | GARS1-DT | 7 | + |
| exon-exon | SUMO2P3 | | - | ND2 | MT | + |
| exon-exon | VASP | 19 | - | TMSB4X | X | + |
| exon-intron | MDK | 11 | - | RABGAP1 | 9 | - |
| exon-intron | SLMAP | 3 | - | LOC105377103 | 3 | - |
| exon-intron | RPP14 | 3 | - | STK11 | 19 | - |
| exon-exon | HDAC6 | X | + | STIM2 | 4 | + |
| exon-exon | FRZB | 2 | + | SDC2 | 8 | - |
| exon-exon | ACOT7 | 1 | + | ZCCHC24 | 10 | - |
| intron-exon | IGSF22 | | - | TAF10 | 11 | - |
| exon-exon | RPL13 | 16 | - | SLC19A1 | | - |
| exon-intron | ND2 | MT | - | AL353595.1 | | + |
| exon-exon | NPM1 | 5 | - | NPM1 | 5 | + |
| exon-intron | RPL36AP26 | | + | LOC105375138 | | - |
| intron-exon | POLR2F | 22 | + | LRFN3 | 19 | - |
| exon-exon | COL1A1 | 17 | + | MYO1B | 2 | - |
| intron-exon | LOC101928174 | 15 | + | RNA45SN2 | 21 | - |
| exon-exon | NEU1 | 6 | - | NEU1 | 6 | + |
| exon-intron | LOC105369205 | 17 | + | DHCR24 | 1 | + |
| exon-intron | NUDT15 | 13 | - | SUCLA2 | 13 | - |
| intron-exon | TRNE | MT | - | PLXNA2 | 1 | + |
| exon-exon | ARMCX3 | X | - | HCG25 | | + |
| exon-exon | SEC13 | 3 | - | SEC13 | 3 | + |
| exon-exon | SLC25A6 | Y | + | SLC25A6 | X | - |
| exon-intron | NUSAP1 | 15 | - | PRKCH | 14 | - |
| exon-exon | SNHG7 | 9 | + | LAMB1 | 7 | + |
| exon-exon | RNA45SN2 | 21 | - | UBA1 | X | - |
| exon-exon | SENP3-EIF4A1 | 17 | - | HSPA2 | 14 | - |
| intron-exon | LOC107986945 | | - | ZBTB38 | 3 | - |
| exon-exon | TNRC6C | 17 | - | ALG2 | 9 | + |
| exon-exon | C3 | 19 | + | USP38 | 4 | - |
| intron-exon | TSPAN9 | 12 | + | REV3L | 6 | + |
| exon-intron | NPRL3 | 16 | - | MPG | 16 | - |
| exon-exon | ACSM5 | | + | LOC105371119 | | + |
| intron-exon | NGLY1 | 3 | + | C20orf27 | 20 | + |
| exon-intron | ELN | 7 | - | WDR1 | 4 | + |
| exon-exon | MIR205HG | 1 | - | NEXN | 1 | - |
| exon-exon | MOV10 | 1 | + | PSMF1 | 20 | - |
| intron-exon | DIPK1A | 1 | - | WDR76 | 15 | - |
| exon-intron | LPIN3 | 20 | + | TUBGCP3 | 13 | + |
| intron-exon | PLEKHH2 | 2 | + | SRCAP | 16 | - |
| intron-exon | REV3L | 6 | - | MFSD4B | 6 | - |
| exon-intron | PURA | 5 | - | CHST9 | 18 | + |
| exon-intron | PIGW | 17 | - | TSPAN1 | 1 | + |
| exon-exon | HMGB1 | 13 | + | MAPRE1 | 20 | - |
| exon-exon | RAB7A | 3 | + | DICER1 | 14 | - |
| intron-exon | WSB1 | 17 | - | LOC105378179 | 14 | + |
| exon-intron | GNAI2 | 3 | - | MRPL23 | 11 | + |
| exon-intron | NECTIN3-AS1 | 3 | + | NECTIN3 | 3 | + |
| intron-exon | TRNL1 | MT | - | TTC3 | 21 | - |
| intron-exon | NAA11 | 4 | - | LINC01088 | 4 | - |
| exon-exon | KCTD15 | 19 | - | CYTB | MT | - |
| exon-exon | PCOLCE | 7 | - | SEMA3B | 3 | - |
| intron-exon | AL008638.1 | 22 | - | LOC107985534 | 22 | - |
| exon-exon | PPP2CA | 5 | + | RANGAP1 | 22 | + |
| exon-exon | FGFR2 | 10 | + | GLB1L2 | 11 | - |
| exon-exon | RPL13A | 19 | - | FAM32A | 19 | - |
| exon-exon | YWHAE | 17 | + | YWHAE | 17 | - |
| exon-exon | LAIR1 | 19 | + | EIF4E2 | 2 | - |
| exon-exon | MTA1 | 14 | - | LOC112268155 | 15 | - |
| exon-exon | ND6 | MT | - | PLEKHM2 | 1 | - |
| intron-exon | RASSF4 | 10 | + | BPGM | 7 | - |
| exon-intron | VAV2 | 9 | - | ZNF818P | 19 | + |
| exon-exon | RACK1 | 5 | + | WASF2 | 1 | + |
| exon-exon | LINC00673 | 17 | + | LRP1 | 12 | - |
| exon-exon | RNA45SN2 | 21 | - | ZNF333 | 19 | + |
| exon-exon | ND4 | MT | - | ZNF7 | 8 | - |
| intron-exon | FAM153CP | 5 | - | NUP50 | 22 | - |
| exon-intron | LOC105370174 | 13 | - | FAM214A | 15 | - |
| exon-exon | AGAP11 | 10 | - | MMRN2 | 10 | - |
| intron-exon | ATAD2 | 8 | + | ZFYVE26 | 14 | - |
| exon-exon | PPDPF | 20 | - | RNA45SN1 | 21 | - |
| exon-exon | RPS4X | X | + | ALG10B | 12 | - |
| intron-exon | AL391839.3 | 10 | + | LOC101929431 | 10 | + |
| exon-intron | NPRL3 | 16 | - | MPG | 16 | - |
| exon-exon | ITGAE | 17 | + | CALHM2 | 10 | + |
| exon-exon | RNA45SN1 | 21 | - | RNF216 | 7 | + |
| exon-exon | CRCP | 7 | - | ASL | 7 | - |
| exon-exon | MMS19 | 10 | + | AJUBA | 14 | + |
| exon-intron | PRSS23 | 11 | - | LRPPRC | 2 | + |
| exon-intron | AIMP1 | 4 | - | MIR2052HG | 8 | + |
| exon-exon | CDK5RAP3 | 17 | - | TRERF1 | 6 | + |
| intron-exon | LOC105375492 | 7 | - | SND1 | 7 | - |
| exon-intron | SARNP | 12 | - | HDLBP | 2 | - |
| intron-exon | AL672291.1 | 1 | - | ZNF692 | 1 | - |
| exon-exon | CIAPIN1 | 16 | + | PDHA2 | 4 | - |
| intron-exon | TAF9B | X | - | PGK1 | X | - |
| exon-exon | MVP | 16 | - | AP1B1 | 22 | + |
| exon-exon | RPS12 | 6 | - | NIPAL3 | 1 | - |
| exon-intron | CD34 | 1 | + | DEPDC1B | 5 | + |
| exon-exon | PRRX1 | 1 | - | PGRMC2 | 4 | + |
| intron-exon | DDN-AS1 | 12 | + | KMT2D | 12 | + |
| exon-exon | SAMD14 | 17 | - | PDK2 | 17 | - |
| intron-exon | SVIL | 10 | - | MYH9 | 22 | + |
| exon-intron | KDM5C | X | + | COLGALT1 | 19 | - |
| exon-exon | MAPK1 | 22 | + | CASP1 | 11 | - |
| exon-intron | SLC25A1 | 22 | + | FMNL3 | 12 | + |
| exon-intron | TRIM14 | 9 | + | SLC6A16 | 19 | + |
| exon-exon | MRPS25 | 3 | + | SEC23B | 20 | - |
| exon-exon | BCAT1 | 12 | + | DNAJC18 | 5 | + |
| intron-exon | ADGRE3 | 19 | - | TXNRD1 | 12 | - |
| exon-exon | LOC101927235 | 2 | - | SPI1 | 11 | + |
| exon-intron | CDK6 | 7 | + | MBD3 | 19 | + |
| exon-intron | CST3 | 20 | + | LPP | 3 | - |
| intron-exon | LOC105379243 | 8 | - | NEIL2 | 8 | - |
| exon-exon | NRCAM | 7 | + | NRCAM | 7 | - |
| exon-exon | FURIN | 15 | - | PCNX3 | 11 | - |
| intron-exon | AC064829.1 | Y | - | LINC00279 | Y | - |
| intron-exon | SMCR8 | 17 | + | SHMT1 | 17 | + |
| exon-exon | PAK4 | 19 | - | RNA28SN2 | 21 | - |
| intron-exon | RPAIN | 17 | + | C1QBP | 17 | + |
| exon-intron | NFATC2IP | 16 | - | ARHGEF7 | 13 | - |
| exon-intron | TMEM120A | 7 | - | LOC102723543 | 1 | - |
| intron-exon | WNT5B | 12 | - | PPP2R1A | 19 | - |
| intron-exon | AL049649.1 | 20 | + | LOC339593 | 20 | + |
| exon-intron | ERH | 14 | + | ELK4 | 1 | + |
| exon-intron | KCNAB1 | 3 | + | GIPC2 | 1 | - |
| exon-exon | TM2D1 | 1 | - | TLE2 | 19 | - |
| exon-exon | HLA-C | 6 | + | LOC112268284 | 21 | - |
| intron-exon | ALOX12-AS1 | 17 | + | ALOX12 | 17 | + |
| exon-intron | CA11 | 19 | + | SEC1P | 19 | + |
| exon-exon | COL8A1 | 3 | - | COL8A1 | 3 | + |
| exon-exon | ELN | 7 | - | CAPG | 2 | + |
| exon-intron | HIRIP3 | 16 | + | LOC107985291 | 19 | - |
| exon-intron | RPL13AP25 | 13 | + | LOC105369194 | 3 | + |
| exon-intron | PCTP | 17 | + | AC090618.1 | 17 | + |
| exon-intron | IGKC | 2 | + | IGK | 2 | + |
| intron-exon | RTCA-AS1 | 1 | + | DBT | 1 | + |
| exon-exon | MRPL9 | 1 | + | RPS6KA2 | 6 | - |
| exon-exon | DNAAF4-CCPG1 | 15 | - | PIGB | 15 | - |
| intron-exon | WWOX | 16 | - | ICAM1 | 19 | - |
| exon-exon | ARPC3P3 | 11 | + | ARPC3 | 12 | - |
| exon-exon | RASD1 | | + | RASD1 | 17 | - |
| intron-exon | CACNA2D1 | 7 | + | CACNA2D1 | 7 | - |
| exon-exon | MED21 | 12 | - | FBXO11 | 2 | + |
| exon-exon | ARHGEF5 | | - | HBA2 | 16 | - |
| exon-exon | COL1A1 | 17 | + | COL1A1 | 17 | - |
| exon-exon | SRCAP | 16 | - | SRCAP | 16 | + |
| exon-intron | CCDC18 | 1 | + | CCDC18-AS1 | 1 | + |
| exon-intron | RBP4 | 10 | + | ZDHHC17 | 12 | + |
| intron-exon | NOTCH2NLB | 1 | + | COPE | 19 | - |
| exon-exon | GARS1 | 7 | - | DDX17 | 22 | - |
| exon-exon | IGHG1 | 14 | + | IGHG3 | 14 | + |
| exon-exon | IGLV1-47 | 22 | + | IGLL5 | 22 | + |
| exon-intron | TALAM1 | 11 | - | AC007656.1 | 12 | - |
| exon-exon | MRPS12 | 19 | - | RBM33 | 7 | - |
| exon-exon | RLN1 | 9 | - | RLN2 | 9 | - |
| intron-exon | LOC105377291 | 4 | - | OLFML2A | 9 | - |
| intron-exon | LOC105371611 | 1 | - | FMO2 | 1 | + |
| exon-exon | LOX | 5 | + | LOC107985476 | 21 | - |
| exon-intron | MYL2 | 12 | + | SNHG14 | 15 | - |
| exon-exon | PRKCD | 3 | - | PRKCD | 3 | + |
| exon-exon | PPP1R3F | X | - | PPP1R3F | X | + |
| exon-exon | MICOS10P2 | | + | NCOR1 | 17 | + |
| intron-exon | SMIM13 | 6 | + | ERVFRD-1 | | - |
| exon-exon | JAG1 | 20 | + | EIF4A2 | 3 | + |
| exon-intron | TCEAL9 | X | - | RHOBTB3 | 5 | - |
| intron-exon | IGH | 14 | + | IGHA1 | 14 | + |
| exon-intron | TMA7 | 3 | + | PVT1 | 8 | - |
| intron-exon | LOC102724715 | | - | MYO1D | 17 | - |
| exon-exon | PRKCSH | 19 | - | ENC1 | 5 | + |
| intron-exon | RRP36 | 6 | - | RNA45SN3 | 21 | - |
| exon-exon | GPC3 | X | + | PDGFRA | 4 | - |
| exon-exon | RPL13 | 16 | - | SP1 | 12 | - |
| exon-exon | ADAMTS12 | 5 | + | TPX2 | 20 | - |
| exon-exon | EIF3I | 1 | - | NONO | X | - |
| intron-exon | COL4A4 | 2 | - | THRA | 17 | + |
| intron-exon | IGH | 14 | + | TBC1D1 | 4 | + |
| intron-exon | RGPD3 | 2 | - | PLGLA | 2 | - |
| exon-intron | OIP5-AS1 | 15 | - | SLC36A2 | 5 | + |
| exon-exon | LRPAP1 | 4 | + | LRPAP1 | 4 | - |
| exon-intron | HSPB1P1 | 9 | + | FARP2 | 2 | - |
| exon-intron | LPP | 3 | - | ETFB | 19 | + |
| exon-exon | PCK1 | 20 | - | EPG5 | 18 | + |
| exon-exon | KDELR3 | 22 | - | KDELR3 | 22 | + |
| exon-exon | KDM6B | 17 | - | RTN4 | 2 | - |
| intron-exon | SEC63 | 6 | - | SLC26A6 | 3 | + |
| exon-exon | CMTM6 | 3 | + | CMTM6 | 3 | - |
| exon-intron | PLPBP | 8 | - | WDR82 | 3 | + |
| intron-exon | WSB1 | 17 | - | RECK | 9 | - |
| intron-exon | SPDYE1 | | + | POLR2J | | + |
| intron-exon | IGH | 14 | + | IGHA1 | 14 | + |
| exon-exon | SLC35E2B | 1 | - | CDK11B | 1 | - |
| intron-exon | FAM193A | 4 | - | UBA1 | X | - |
| intron-exon | AC135178.6 | 17 | - | PFAS | 17 | - |
| exon-exon | LOC101927978 | 16 | - | LOC107984814 | 16 | - |
| exon-exon | PIK3R4 | 3 | + | PIK3R4 | 3 | - |
| exon-intron | LCP1 | 13 | + | SCN1A | | - |
| exon-intron | ERN2 | 16 | + | HDLBP | 2 | + |
| exon-exon | BHMT2 | 5 | - | TMBIM4 | 12 | - |
| exon-exon | AP1S3 | 2 | + | STOM | 9 | + |
| exon-intron | SNHG16 | 17 | - | OSBPL5 | 11 | + |
| exon-exon | CDC6 | 17 | - | CDC6 | 17 | + |
| intron-exon | TSPOAP1-AS1 | 17 | + | RIPOR1 | 16 | - |
| exon-intron | RAB4B-EGLN2 | 19 | + | CYP2F2P | | + |
| exon-exon | MAPK1IP1L | 14 | - | MAPK1IP1L | 14 | + |
| exon-intron | ARMC1 | 8 | + | SGMS1-AS1 | 10 | - |
| intron-exon | AC093895.1 | 4 | + | LOC105377324 | 4 | + |
| exon-exon | RGMA | 15 | + | RNA45SN1 | 21 | - |
| exon-exon | RNA45SN2 | 21 | - | RASGRP3 | 2 | - |
| exon-exon | PLXNB2 | 22 | + | TRIM25 | 17 | + |
| exon-intron | CAST | 5 | - | ERAP1 | 5 | - |
| exon-exon | FTL | 19 | - | RNA45SN2 | 21 | - |
| exon-exon | NEURL1 | 10 | - | RNA45SN2 | 21 | - |
| exon-exon | LOC105371787 | | + | FAM215A | | + |
| exon-exon | CCL8 | 17 | - | ARL8B | 3 | - |
| exon-intron | RPS27L | 15 | + | ERMP1 | 9 | - |
| intron-exon | CD200 | 3 | - | LOC105374042 | 3 | - |
| exon-exon | SUCLG2 | 3 | + | DLG3 | X | - |
| intron-exon | NLRP1 | | + | PHYHIP | | + |
| exon-exon | JUND | 19 | - | PHF5A | 22 | - |
| exon-intron | USP11 | X | - | PRODH | 22 | + |
| exon-intron | GIT1 | 17 | + | CYB5D2 | 17 | - |
| exon-exon | PCSK1N | X | + | RNA45SN3 | 21 | - |
| exon-intron | CYTB | MT | - | KCTD5 | 16 | - |
| exon-exon | CHD2 | 15 | - | HSP90B1 | 12 | - |
| exon-intron | RPL10P16 | 19 | + | IQGAP2 | 5 | - |
| exon-exon | PAPSS1 | 4 | + | PAPSS1 | 4 | - |
| exon-exon | DPP6 | 7 | - | DTNA | 18 | + |
| intron-exon | STAU2 | 8 | + | SSR1 | 6 | + |
| exon-intron | PECR | | + | THEM7P | | + |
| exon-exon | AAAS | 12 | + | ZNF414 | 19 | + |
| exon-intron | SEPTIN9 | 17 | + | EFR3B | 2 | + |
| exon-intron | PRMT3 | 11 | + | EIF4G3 | 1 | - |
| exon-intron | HUWE1 | X | - | RNR2 | MT | + |
| intron-exon | PIN4 | X | - | ND4 | MT | + |
| exon-exon | H4C8 | 6 | - | LOC105374985 | 6 | - |
| exon-exon | COX3 | MT | + | TRIM52 | 5 | - |
| exon-intron | RNA45SN3 | 21 | + | TTC6 | 14 | - |
| exon-intron | LINC01137 | 1 | - | LOC107984942 | 1 | - |
| exon-intron | AQP1 | 7 | + | SPTBN1 | 2 | + |
| exon-intron | PIM1 | 6 | - | GBF1 | 10 | - |
| intron-exon | DHX16 | | - | C6orf136 | | - |
| exon-intron | HLA-A | 6 | - | PERP | 6 | + |
| exon-exon | YBX1 | 1 | - | YBX1 | 1 | + |
| exon-intron | LOC105369839 | 12 | + | LINC02445 | 12 | + |
| intron-exon | IGL | 22 | - | IGLC2 | 22 | - |
| exon-exon | COX6A1 | 12 | - | LGR5 | 12 | - |
| exon-exon | RNASEK-C17orf49 | 17 | - | IKBKE | 1 | - |
| exon-intron | MRPL44 | 2 | - | DNAH14 | 1 | - |
| exon-intron | FNIP1 | 5 | - | CDC42SE2 | 5 | - |
| exon-exon | FTL | 19 | - | MYH11 | 16 | - |
| exon-exon | PKD1 | 16 | + | LOC105371049 | 16 | + |
| exon-intron | COX15 | 10 | + | CSE1L | 20 | - |
| exon-exon | RNA45SN1 | 21 | + | GNB1 | 1 | - |
| exon-exon | RNA45SN1 | 21 | + | EIF1 | 17 | + |
| exon-exon | ARL16 | 17 | - | OXLD1 | 17 | - |
| exon-intron | RNA45SN2 | 21 | + | MTATP6P1 | 1 | + |
| exon-intron | RNA45SN2 | 21 | + | TXNRD1 | 12 | + |
| exon-exon | RNA45SN3 | 21 | + | HSPB1 | 7 | + |
| exon-exon | RNA45SN1 | 21 | - | TMEM138 | 11 | + |
| exon-exon | RAI1 | 17 | + | JAZF1 | 7 | - |
| exon-intron | RNA45SN2 | 21 | - | RNR2 | MT | + |
| intron-exon | PAK3 | X | - | XPOT | 12 | - |
| intron-exon | OGG1 | 3 | + | CBX2 | 17 | - |
| exon-exon | COX5B | 2 | - | PLK4 | 4 | + |
| intron-exon | RAN | 12 | + | ND4 | MT | + |
| exon-exon | UBE2L3 | 22 | - | UBE2L1 | 14 | + |
| exon-exon | ND3 | MT | - | U2SURP | 3 | + |
| exon-intron | TXNRD2 | 22 | + | RHBDD1 | 2 | - |
| exon-intron | CKB | 14 | + | LOC112268284 | 21 | - |
| exon-exon | ASIC1 | 12 | - | CEMP1 | 16 | - |
| exon-intron | LOC728743 | 7 | - | LOC107986859 | 7 | - |
| intron-exon | AGPS | 2 | + | ANKRD10 | 13 | + |
| exon-intron | IGBP1 | X | - | GLS | 2 | - |
| intron-exon | IGH | 14 | + | IGHA1 | 14 | + |
| exon-exon | GNB1 | 1 | + | COX1 | MT | - |
| intron-exon | MTCH2 | 11 | + | MTCH2 | 11 | - |
| exon-exon | BTG1 | 12 | + | BTG1 | 12 | - |
| exon-exon | SSB | 2 | - | PHOSPHO2-KLHL23 | 2 | - |
| exon-intron | BRD7 | 16 | + | AC007493.2 | 16 | + |
| exon-intron | LRRC61 | 7 | - | ACTR3C | 7 | - |
| exon-intron | CYP21A1P | 6 | + | LOC106780804 | 6 | + |
| intron-exon | IGH | 14 | + | IGHG1 | 14 | + |
| intron-exon | MTND1P23 | 1 | - | MBD6 | 12 | - |
| exon-intron | NGRN | 15 | - | AC091167.6 | 15 | - |
| exon-exon | POLDIP2 | 17 | - | TNFAIP1 | 17 | - |
| exon-intron | ND1 | MT | - | LOC105370733 | 15 | + |
| intron-exon | LOC112268138 | 14 | + | IGHG1 | 14 | + |
| exon-exon | MEIS1 | 2 | + | MEIS1 | 2 | - |
| intron-exon | IGH | 14 | + | IGHA1 | 14 | + |
| exon-exon | ZMIZ2 | 7 | - | RNA45SN1 | 21 | - |
| exon-intron | TIMM10B | 11 | - | NSD3 | 8 | + |
| exon-exon | MIDN | 19 | - | ARL8A | 1 | + |
| exon-exon | SRI | 7 | + | SRIP3 | Y | + |
| intron-exon | GSEC | 11 | - | DCPS | 11 | - |
| exon-intron | SMPDL3B | 1 | - | DNAJB12 | 10 | + |
| exon-exon | PCYT2 | 17 | + | IQCE | 7 | - |
| exon-exon | U2AF1L4 | 19 | + | GTF3C5 | 9 | - |
| exon-intron | SPINK1 | 5 | + | NCOA3 | 20 | - |
| intron-exon | IGH | 14 | + | IGHA1 | 14 | + |
| exon-exon | ACSBG1 | 15 | - | IDH3A | 15 | + |
| exon-exon | TLE5 | 19 | + | ABL1 | 9 | - |
| intron-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| exon-intron | IFI27 | 14 | - | SREBF2 | 22 | - |
| intron-exon | AC006262.3 | 19 | + | IGFL1 | 19 | + |
| intron-exon | TAF9B | X | - | PGK1 | X | - |
| exon-exon | MCC | 5 | + | DVL3 | 3 | - |
| exon-intron | POLR2J3 | 7 | + | RAB1A | 2 | + |
| exon-intron | CNKSR3 | 6 | + | FNDC3A | 13 | - |
| exon-exon | EEF1A1 | 6 | + | IGSF3 | 1 | + |
| exon-exon | ZNF219 | 14 | + | LOC112268284 | 21 | - |
| intron-exon | ARL10 | 5 | + | NOP16 | 5 | - |
| exon-intron | NAV1 | 1 | + | LOC112577528 | 1 | + |
| exon-intron | SCRIB | 8 | - | IQANK1 | 8 | - |
| exon-exon | MPRIP | 17 | + | FTL | 19 | + |
| intron-exon | IGH | 14 | + | IGHA1 | 14 | + |
| exon-exon | CCDC80 | 3 | + | PTPRC | 1 | - |
| exon-intron | RPS11 | 19 | - | LIPC | 15 | - |
| exon-intron | LAG3 | 12 | - | PTMS | 12 | - |
| exon-exon | PPDPF | 20 | - | C1orf61 | 1 | + |
| exon-exon | MT2A | 16 | - | RNA45SN1 | 21 | - |
| exon-intron | CEBPB | 20 | - | FAAH2 | X | - |
| exon-intron | GIGYF2 | 2 | - | MEIS1 | 2 | - |
| intron-exon | IGH | 14 | + | IGHG2 | 14 | + |
| exon-exon | FZD5 | 2 | + | RNA45SN2 | 21 | - |
| intron-exon | CASC1 | 12 | - | IRAG2 | 12 | - |
| intron-exon | LRRC71 | 1 | + | SEMA7A | 15 | + |
| exon-intron | SRP54 | 14 | - | CRTAP | 3 | - |
| exon-intron | NRDC | 1 | + | LOC105378721 | 1 | + |
| exon-exon | ATP6 | MT | - | VMP1 | 17 | - |
| exon-intron | LOC105369782 | 12 | - | PDLIM5 | 4 | - |
| exon-exon | ATP6 | MT | - | NAMPT | 7 | + |
| exon-intron | CS | 12 | + | USP37 | 2 | + |
| exon-intron | RACK1 | 5 | + | RCL1 | 9 | - |
| exon-intron | IL2RG | X | + | LOC105372666 | 20 | - |
| exon-intron | UFSP2 | 4 | + | C4orf47 | 4 | + |
| intron-exon | STPG2 | 4 | - | LGR4 | 11 | + |
| exon-intron | C22orf39 | 22 | + | ANO10 | 3 | + |
| exon-exon | GAPDH | 12 | - | ALDH7A1 | 5 | + |
| exon-exon | LINC01971 | 17 | + | ELAVL3 | 19 | + |
| exon-intron | ARID3A | 19 | - | PCAT14 | 22 | - |
| exon-intron | ZNF207 | 17 | - | RHOT1 | 17 | - |
| intron-exon | TMEM235 | 17 | - | AFMID | 17 | - |
| exon-exon | RPL34 | 4 | - | NEK7 | 1 | - |
| exon-intron | NFIC | 19 | - | RHEX | 1 | - |
| intron-exon | DENND4B | 1 | - | LOC101928059 | 1 | - |
| exon-intron | FBXO36 | 2 | - | LOC107985544 | 22 | - |
| intron-exon | LINC02067 | 3 | + | RPL23AP42 | 3 | - |
| intron-exon | LOC107986310 | 4 | - | LOC107986309 | 4 | - |
| exon-exon | PCSK1N | X | + | RNA45SN1 | 21 | - |
| exon-intron | C12orf65 | 12 | - | PITPNM2 | 12 | - |
| exon-intron | C1orf174 | 1 | + | PPP1CB | 2 | - |
| exon-intron | CTSB | 8 | + | RBM6 | 3 | - |
| exon-exon | CALD1 | 7 | - | CALD1 | 7 | + |
| exon-exon | EEF2K | 16 | - | TNPO3 | 7 | + |
| intron-exon | WDR63 | 1 | - | MCOLN3 | 1 | - |
| exon-intron | RPL21P16 | 10 | - | UBE2E1 | 3 | - |
| intron-exon | LOC107985892 | 2 | + | CAPZA1 | 1 | + |
| exon-exon | ZMYND8 | 20 | + | MACROH2A1 | 5 | - |
| exon-intron | HCFC1 | X | + | LYPLA1 | 8 | + |
| exon-exon | ATP5F1B | 12 | - | RPS6 | 9 | + |
| exon-exon | CS | 12 | - | HSP90AB1 | 6 | - |
| exon-exon | SLC25A3 | 12 | + | LBR | 1 | - |
| intron-exon | LINC01592 | 8 | + | TSN | 2 | - |
| exon-exon | DNAJB2 | 2 | - | IFRD1 | 7 | - |
| exon-exon | COPS7B | 2 | - | COPS7B | 2 | + |
| exon-intron | BLMH | 17 | + | EIF3C | 16 | - |
| exon-exon | PCGF2 | 17 | + | LOC100287808 | 17 | + |
| exon-exon | TRAF4 | 17 | - | TRAF4 | 17 | + |
| exon-exon | FAM110B | 8 | - | AGA | 4 | - |
| exon-exon | COL6A2 | 21 | - | MPRIP | 17 | - |
| intron-exon | ARVCF | 22 | - | SEPHS1 | 10 | + |
| exon-intron | CUEDC1 | 17 | + | AKIP1 | 11 | - |
| intron-exon | LOC105376751 | 16 | + | AEN | 15 | - |
| exon-exon | RAB7A | 3 | - | NSD3 | 8 | + |
| intron-exon | ITGB1-DT | 10 | - | RHNO1 | 12 | - |
| exon-intron | PARP14 | 3 | + | AC010201.2 | 12 | + |
| exon-exon | MCHR2-AS1 | 6 | - | MCHR2 | 6 | - |
| exon-exon | XPNPEP3 | 22 | - | USO1 | 4 | - |
| exon-exon | UTP3 | 4 | - | C16orf87 | 16 | + |
| exon-exon | NTRK3 | 15 | + | ACTR8 | 3 | + |
| exon-intron | MAPK1 | 22 | + | JAZF1 | 7 | + |
| exon-intron | ATE1-AS1 | 10 | + | NSMCE4A | 10 | + |
| exon-intron | BACE2 | 21 | - | DNAJB6 | 7 | - |
| exon-intron | SAMD14 | 17 | + | LARP1 | 5 | - |
| intron-exon | BAG6 | 6 | + | EPHX1 | 1 | - |
| exon-exon | ADAP2 | 17 | - | GSTZ1 | 14 | - |
| exon-exon | PRSS8 | 16 | + | S100A14 | 1 | + |
| exon-intron | SLC30A5 | 5 | - | TAOK3 | 12 | + |
| intron-exon | PTK2 | 8 | - | AHSA1 | 14 | + |
| exon-exon | RPL23 | 17 | - | DFFA | 1 | - |
| exon-intron | SMYD5 | 2 | - | PSMB7 | 9 | + |
| exon-exon | LINC02582 | 18 | - | PPP1R8 | 1 | + |
| exon-exon | SPATA21 | 1 | - | LOC100130075 | 12 | + |
| exon-exon | RPL8 | 8 | + | KIRREL1 | 1 | - |
| intron-exon | ANP32A | 15 | + | GSDMD | 8 | - |
| exon-exon | MT1L | 16 | - | CABYR | 18 | - |
| exon-exon | ZNF316 | 7 | - | PYGB | 20 | - |
| exon-exon | TSPYL2 | X | - | NCL | 2 | + |
| exon-exon | UBE4A | 11 | + | VBP1 | X | + |
| exon-intron | SERTAD4-AS1 | 1 | + | SERTAD4 | 1 | + |
| exon-exon | PIM3 | 22 | - | PORCN | X | + |
| exon-intron | NACC1 | 19 | - | PODXL | 7 | + |
| exon-exon | U2AF2 | 19 | + | ZFP36L2 | 2 | - |
| exon-exon | COASY | 17 | - | PPAN-P2RY11 | 19 | - |
| exon-exon | RPL26P6 | 10 | + | SMG1P1 | 16 | - |
| exon-exon | MAZ | 16 | - | MAZ | 16 | + |
| exon-exon | SPATA8 | 15 | - | PDE3B | 11 | - |
| exon-exon | LEFTY2 | 1 | + | TTC3 | 21 | + |
| intron-exon | CUBN | 10 | + | TINAGL1 | 1 | - |
| exon-exon | FKBP8 | 19 | - | ELP6 | 3 | - |
| exon-intron | DIDO1 | 20 | + | LOC100507351 | 17 | - |
| exon-exon | ERF | 19 | + | KIAA2013 | 1 | + |
| exon-exon | C7orf50 | 7 | + | ZYX | 7 | - |
| intron-exon | ZNF609 | 15 | + | FGB | 4 | - |
| exon-intron | LOC107985251 | 1 | + | C4BPAP1 | 1 | + |
| intron-exon | ITFG2-AS1 | 12 | - | ZFR | 5 | + |
| exon-exon | TPI1P1 | 1 | - | MAPK14 | 6 | - |
| exon-intron | RAD9A | 11 | + | LOC112268284 | 21 | - |
| exon-exon | COMMD10 | 5 | + | ELOF1 | 19 | + |
| exon-exon | ZBTB7A | 19 | + | TIMM44 | 19 | + |
| intron-exon | ANKAR | 2 | + | LOC105378179 | 14 | + |
| exon-exon | LOC105370792 | 15 | + | SLC38A5 | X | + |
| exon-exon | ZFYVE21 | 14 | - | BACH1 | 21 | - |
| exon-exon | CHRAC1 | 8 | - | SBNO1 | 12 | + |
| exon-intron | ZNF784 | 19 | + | RPGRIP1L | 16 | + |
| intron-exon | LOC107984217 | 10 | + | CLK2 | 1 | + |
| intron-exon | ZBTB44 | 11 | + | CLU | 8 | + |
| exon-exon | GOLGB1 | 3 | + | ATG5 | 6 | + |
| exon-exon | TMEM68 | 8 | + | ERCC3 | 2 | + |
| exon-exon | LMF1 | 16 | + | TSPOAP1 | 17 | + |
| exon-intron | CAMK2N1 | 1 | + | ABCD3 | 1 | - |
| exon-intron | SPON1 | 11 | - | RP11-563D10.1 | 1 | + |
| intron-exon | PRSS54 | 16 | - | IQGAP1 | 15 | - |
| exon-exon | ZHX2 | 8 | - | HNRNPA3 | 2 | - |
| intron-exon | LINC00856 | 10 | + | LINC00856 | 10 | - |
| exon-exon | DNAJB9 | 7 | - | DNAJB9 | 7 | + |
| exon-exon | NBPF15 | 1 | + | PFN1P2 | 1 | - |
| exon-intron | FIBP | 11 | + | RNA28SP | 21 | - |
| exon-exon | RAB7A | 3 | - | NSD3 | 8 | + |
| exon-intron | AKAP9 | 7 | + | LINC02698 | 11 | - |
| exon-exon | AKR1B1 | 7 | + | PPP1R21 | 2 | - |
| exon-intron | NFKB2 | 10 | - | POLR2A | 17 | - |
| exon-intron | DCHS1 | 11 | + | TAF4 | 20 | + |
| exon-intron | DPYSL5 | 2 | - | LOC105374845 | 2 | + |
| exon-exon | RASGRP4 | 19 | + | WDR33 | 2 | + |
| intron-exon | THADA | 2 | - | MTA3 | 2 | - |
| exon-intron | STARD3NL | 7 | - | CTBP1-AS | 4 | + |
| intron-exon | MRPL23 | 11 | + | MLLT11 | 1 | - |
| exon-exon | ST20-MTHFS | 15 | + | ST20-AS1 | 15 | + |
| exon-exon | MRPS18B | 6 | - | NFATC2IP | 16 | + |
| exon-intron | HPS6 | 10 | + | STX16-NPEPL1 | 20 | + |
| exon-intron | PLEKHH3 | 17 | + | PTBP1 | 19 | - |
| intron-exon | ZRANB3 | 2 | - | ILDR2 | 1 | + |
| exon-exon | ZDHHC1 | 16 | + | RNA45SN2 | 21 | - |
| intron-exon | RSPH14 | 22 | - | MED29 | 19 | - |
| exon-exon | DNAH12 | 3 | + | FUT10 | 8 | + |
| exon-exon | IL32 | 16 | - | PUS1 | 12 | - |
| exon-exon | DGKZ | 11 | - | RAB6B | 3 | + |
| exon-intron | IFITM1 | 11 | - | CRIM1 | 2 | - |
| exon-exon | BCL2L2-PABPN1 | 14 | - | ZBTB16 | 11 | + |
| exon-exon | TERF1P3 | 4 | + | MLEC | 12 | - |
| exon-intron | EMILIN1 | 2 | - | GPHN | 14 | + |
| exon-exon | CLU | 8 | + | ZBTB18 | 1 | - |
| exon-intron | HCLS1 | 3 | + | CDK14 | 7 | - |
| exon-intron | GSTM2 | 1 | - | ARHGEF3 | 3 | + |
| exon-exon | DES | 2 | - | FHDC1 | 4 | - |
| intron-exon | ARL14EPL | 5 | + | CHD8 | 14 | + |
| exon-exon | KRT19 | 17 | + | SPINT1 | 15 | - |
| exon-exon | BRD9 | 5 | + | ACADVL | 17 | - |
| intron-exon | LOC105378287 | 10 | + | NEFM | 8 | - |
| intron-exon | CABP4 | 11 | + | TMEM134 | 11 | + |
| exon-exon | RNF187 | 1 | + | LOC105373124 | 1 | + |
| intron-exon | IL6ST | 5 | - | BTG2 | 1 | - |
| intron-exon | LOC107984139 | 19 | + | ACTB | 7 | + |
| exon-intron | NDUFA10 | 2 | - | NPLOC4 | 17 | - |
| exon-exon | SLC25A35 | 17 | + | CHD3 | 17 | - |
| intron-exon | STK32A | 5 | + | DCTN1 | 2 | + |
| exon-exon | SLC35A2 | X | - | PQBP1 | X | - |
| exon-exon | HSP90AB1 | 6 | - | HSP90AB1 | 6 | + |
| exon-exon | ZRANB3 | 2 | + | NADK2 | 5 | + |
| exon-exon | RDH13 | 19 | - | LOC107985325 | 19 | - |
| exon-exon | ZC3H7B | 22 | + | SUOX | 12 | + |
| exon-exon | SRRM2 | 16 | - | CBX1 | 17 | + |
| intron-exon | LOC105373021 | 22 | + | SRRM2 | 16 | - |
| exon-exon | COA6-AS1 | 1 | + | COA6 | 1 | + |
| exon-exon | VAV3 | 1 | - | WARS2 | 1 | - |
| exon-exon | SP3 | 2 | + | AKR1B1 | 7 | - |
| exon-exon | SRPK1 | 6 | + | SRPK1 | 6 | - |
| exon-exon | LINC02558 | 22 | - | SLC5A1 | 22 | - |
| intron-exon | ITFG1 | 16 | - | ITFG1-AS1 | 16 | - |
| intron-exon | LOC100288866 | 17 | - | NONOP1 | 16 | + |
| exon-exon | RBM38 | 20 | - | CARS1 | 11 | + |
| intron-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| intron-exon | IGH | 14 | + | IGHA2 | 14 | + |
| exon-exon | SLFN5 | 17 | - | SLFN5 | 17 | + |
| exon-intron | FLJ32255 | 5 | + | LOC105374746 | 5 | + |
| intron-exon | PAFAH1B1 | 17 | + | SNTN | 3 | + |
| intron-exon | HCG21 | 6 | - | MUCL3 | 6 | + |
| exon-exon | SNHG14 | 15 | - | ARHGEF7 | 13 | - |
| exon-exon | TBX3 | 12 | + | KRT5 | 12 | + |
| exon-exon | BANF1 | 11 | - | EIF2AK2 | 2 | + |
| exon-exon | RPL15 | 3 | - | TGOLN2 | 2 | + |
| exon-intron | HCN3 | 1 | + | MUC1 | 1 | + |
| exon-exon | H1-10 | 3 | + | H1-10-AS1 | 3 | + |
| intron-exon | NARS2 | 11 | - | RNA45SN3 | 21 | - |
| exon-intron | PSAP | 10 | + | HERC2P9 | 15 | - |
| intron-exon | NMNAT2 | 1 | - | LAMC2 | 1 | - |
| exon-exon | POLR2H | 3 | - | SRRT | 7 | - |
| exon-exon | APOE | 19 | - | APOE | 19 | + |
| exon-exon | FLII | 17 | + | FLII | 17 | - |
| exon-intron | TMED5 | 1 | - | R3HDM1 | 2 | + |
| exon-exon | SEZ6L2 | 16 | + | SEZ6L2 | 16 | - |
| exon-exon | SOCS7 | 17 | - | SOCS7 | 17 | + |
| exon-exon | NDUFAF8 | 17 | - | ANKLE2 | 12 | + |
| exon-intron | EIF3I | 1 | - | YPEL1 | 22 | + |
| intron-exon | AMZ1 | 7 | + | GNA12 | 7 | - |
| exon-intron | IGFBP5 | 2 | + | RPL35 | 9 | - |
| exon-exon | BAMBI | 10 | + | COL15A1 | 9 | + |
| exon-exon | RNA45SN1 | 21 | + | FAM160B2 | 8 | + |
| exon-intron | SMIM11A | 21 | - | CFAP43 | 10 | + |
| exon-exon | AURKAIP1 | 1 | + | CCNL2 | 1 | + |
| intron-exon | DCC | 18 | + | LINC01917 | 18 | + |
| exon-exon | SHISA5 | 3 | + | SHISA5 | 3 | - |
| intron-exon | LOC102723945 | 16 | - | MOCS3 | 20 | - |
| exon-exon | COL1A1 | 17 | + | ABI3BP | 3 | + |
| intron-exon | LOC112268138 | 14 | + | IGHG1 | 14 | + |
| intron-exon | MPPED1 | 22 | + | AKAP17A | Y | - |
| exon-intron | UACA | 15 | + | IARS1 | 9 | + |
| exon-intron | DRAP1 | 11 | - | LOC105378585 | 1 | + |
| exon-exon | NUCB1 | 19 | - | RNA45SN1 | 21 | - |
| exon-exon | SLC12A2 | 5 | - | AKIRIN1 | 1 | - |
| exon-exon | KLK3 | 19 | - | GSN | 9 | - |
| exon-exon | APOL1 | 22 | - | IFFO2 | 1 | + |
| exon-exon | CHMP2B | 3 | - | MYH9 | 22 | + |
| intron-exon | HORMAD2-AS1 | 22 | - | EMG1 | 12 | + |
| exon-exon | HSPA5 | 9 | + | HSPA5 | 9 | - |
| exon-exon | NSG1 | 4 | - | CTSD | 11 | + |
| exon-intron | AKIP1 | 11 | - | SOD2 | 6 | + |
| exon-exon | LINC00461 | 5 | + | LINC00461 | 5 | - |
| exon-exon | H1-0 | 22 | - | NINL | 20 | + |
| exon-intron | NUDT15 | 13 | - | ARPP19 | 15 | + |
| intron-exon | LMO7-AS1 | 13 | - | UCHL3 | 13 | - |
| intron-exon | IGH | 14 | + | IGHA2 | 14 | + |
| exon-exon | CALM2 | 2 | + | H2BC4 | 6 | + |
| exon-intron | RPS6KA4 | 11 | - | TES | 7 | - |
| exon-exon | KLF6 | 10 | + | SH3BP4 | 2 | - |
| exon-intron | KCNJ14 | 19 | + | AC008403.1 | 19 | + |
| exon-intron | PACSIN2 | 22 | + | BRWD1 | 21 | + |
| exon-exon | LINC00673 | 17 | + | LINC00673 | 17 | - |
| intron-exon | TDRD10 | 1 | - | PRRG4 | 11 | - |
| exon-exon | NOX1 | X | - | CSTF2 | X | - |
| exon-exon | ZNF655 | 7 | + | TMEM225B | 7 | + |
| exon-exon | NUMBL | 19 | + | CBX6 | 22 | - |
| exon-intron | TP73-AS1 | 1 | + | PWWP3A | 19 | - |
| exon-intron | PAK3 | X | - | DUSP11 | 2 | + |
| exon-exon | NDEL1 | 17 | - | NDEL1 | 17 | + |
| exon-exon | CTNNBL1 | 20 | - | CTNNBL1 | 20 | + |
| intron-exon | ZNF620 | 3 | - | ZNF619 | 3 | - |
| intron-exon | LOC106029312 | 7 | + | STAG3L2 | 7 | + |
| exon-exon | SYCE2 | 19 | - | GCDH | 19 | - |
| intron-exon | C8orf89 | 8 | - | LOC105375901 | 8 | - |
| exon-exon | RPL39 | X | + | RPLP0P6 | 2 | + |
| exon-exon | YWHAE | 17 | + | SPRY3 | Y | - |
| exon-exon | LEMD2 | 6 | + | GOLGA8A | 15 | - |
| intron-exon | SNRPD2 | 19 | + | QPCTL | 19 | + |
| intron-exon | GUSBP14 | 5 | + | CDH12P3 | 5 | + |
| intron-exon | PEAK1 | 15 | + | CHCHD2 | 7 | - |
| exon-exon | RPL18 | 19 | + | RETREG3 | 17 | + |
| exon-intron | COMMD1 | 2 | - | AC058822.1 | 4 | + |
| exon-exon | LOC729973 | 1 | - | LOC100130394 | 5 | - |
| exon-intron | RPL28 | 19 | - | TEKT4P2 | 21 | + |
| exon-intron | GALNT6 | 12 | + | LARP4 | 12 | - |
| intron-exon | HYI-AS1 | 1 | - | HYI | 1 | - |
| intron-exon | AKAP9 | 7 | + | GNS | 12 | - |
| exon-exon | MED27 | 9 | + | MED27 | 9 | - |
| exon-exon | LRRC75A | 17 | - | SNHG29 | 17 | - |
| exon-intron | TATDN3 | 1 | - | LARP4 | 12 | - |
| intron-exon | NUCKS1 | 1 | + | SCNM1 | 1 | - |
| exon-exon | TRMT10B | 9 | + | EXOSC3 | 9 | - |
| intron-exon | CNKSR2 | X | + | KLHL34 | X | + |
| exon-intron | TMEM213 | 7 | - | CARD14 | 17 | + |
| exon-exon | NDUFA10 | 2 | - | NDUFA10 | 2 | + |
| exon-intron | LOC105376361 | 10 | + | AL450322.2 | 10 | + |
| exon-exon | RPL21P16 | 10 | + | ERN1 | | - |
| exon-intron | ND2 | MT | - | ARFIP1 | | + |
| exon-exon | CYB561D2 | 3 | - | PHYKPL | 5 | - |
| exon-intron | CENPH | 5 | - | MGAT5 | 2 | - |
| exon-exon | RNA45SN2 | 21 | - | FRG1BP | 20 | - |
| exon-intron | ARHGAP29 | 1 | + | ARHGAP29-AS1 | 1 | + |
| exon-exon | SSBP3 | 1 | + | EIF4EBP2 | 10 | - |
| exon-intron | INTS11 | 1 | + | MLXIPL | 7 | + |
| exon-exon | TP53I11 | 11 | + | RNA45SN1 | 21 | - |
| exon-exon | TNFRSF14 | 1 | - | C1QA | 1 | - |
| exon-exon | EIF5B | 2 | - | GCN1 | 12 | + |
| intron-exon | CYRIA | 2 | + | ZC3H7B | 22 | - |
| intron-exon | DLEU2 | 13 | - | CENPH | 5 | - |
| intron-exon | FBXL3 | 13 | - | C20orf27 | 20 | - |
| exon-exon | ZDHHC4 | 7 | - | ZDHHC4 | 7 | + |
| exon-exon | CTDSPL | 3 | - | CTDSPL | 3 | + |
| intron-exon | LOC107985522 | 1 | - | LOC100996723 | 1 | - |
| exon-exon | AP1G2 | 14 | + | LOC102724814 | 14 | + |
| exon-exon | RNF216 | 7 | + | COL5A2 | 2 | + |
| exon-intron | IFI6 | 1 | + | RPS29 | 14 | - |
| exon-exon | LOC101929718 | 14 | - | POLR1A | 2 | - |
| exon-exon | ARF3 | 12 | + | ARF3 | 12 | - |
| intron-exon | SNX29 | 16 | - | ZC3HAV1 | 7 | + |
| exon-exon | DDX17 | 22 | + | RN7SK | 6 | - |
| exon-exon | FCMR | 1 | + | FCMR | 1 | - |
| exon-intron | OTUD5 | X | + | ZBTB44 | 11 | + |
| exon-intron | NDFIP1 | 5 | - | SIK3 | 11 | + |
| exon-intron | DDX46 | 5 | - | STARD13 | 13 | + |
| exon-intron | PCMT1 | 6 | - | LINC01982 | 17 | - |
| exon-exon | COL1A2 | 7 | - | EEF1A1 | 6 | + |
| intron-exon | DHDDS | 1 | + | COL18A1 | 21 | - |
| intron-exon | NMNAT2 | 1 | - | LAMC2 | 1 | - |
| exon-exon | PPP1R14A | 19 | + | EIF4G1 | 3 | - |
| intron-exon | GSDME | 7 | + | LOC107986779 | 7 | + |
| intron-exon | IGL | 22 | - | IGLC3 | 22 | - |
| exon-exon | CCL21 | 9 | + | GEMIN5 | 5 | - |
| exon-exon | EIF2AK1 | 7 | - | AIMP2 | 7 | - |
| exon-exon | ATP5F1C | 10 | - | ATP5F1C | 10 | + |
| exon-exon | DDX3X | X | - | DDX3X | X | + |
| intron-exon | LOC112268430 | 2 | + | FN1 | 2 | - |
| exon-exon | IGFBP4 | 17 | + | IGFBP4 | 17 | - |
| exon-exon | IVNS1ABP | 1 | - | IVNS1ABP | 1 | + |
| exon-exon | BYSL | 6 | + | BYSL | 6 | - |
| exon-exon | UBE2J1 | 6 | + | UBE2J1 | 6 | - |
| exon-exon | DGCR2 | 22 | + | DGCR2 | 22 | - |
| exon-exon | CMTR2 | 16 | + | CMTR2 | 16 | - |
| exon-exon | POSTN | 13 | + | POSTN | 13 | - |
| exon-exon | SNX18 | 5 | - | TUBA1A | 12 | - |
| exon-exon | COL5A2 | 2 | + | COL5A2 | 2 | - |
| exon-exon | DCN | 12 | + | DCN | 12 | - |
| exon-exon | COL1A2 | 7 | - | LGALS1 | 22 | + |
| exon-exon | MOV10 | 1 | - | MOV10 | 1 | + |
| exon-intron | RPL37A | 2 | - | TMEM176A | | + |
| exon-exon | AAAS | 12 | + | C15orf39 | 15 | - |
| exon-intron | ZFP36L1 | 14 | + | LINC01091 | 4 | - |
| intron-exon | SNX4 | 3 | + | RFC5 | 12 | - |
| exon-exon | RPL6P27 | 18 | + | RBM39 | 20 | + |
| exon-intron | NF2 | 22 | - | LSM14A | 19 | - |
| exon-exon | CARS1 | 11 | + | CARS1-AS1 | 11 | + |
| exon-exon | MRPL12 | 17 | - | MRPL12 | 17 | + |
| exon-exon | PLPPR3 | 19 | - | PTBP1 | 19 | - |
| exon-exon | PLPPR3 | 19 | - | PTBP1 | 19 | - |
| exon-intron | CACYBP | 1 | - | ST14 | 11 | - |
| exon-intron | PNPT1 | 2 | + | PPWD1 | 5 | - |
| exon-exon | MOAP1 | 14 | + | PDCD1LG2 | 9 | - |
| exon-exon | RPL14P1 | 12 | - | BAIAP2 | 17 | - |
| exon-intron | RPL26 | 17 | + | PTTG1IP | 21 | + |
| exon-exon | SLC66A2 | 18 | - | ZFAS1 | 20 | + |
| exon-exon | SCNM1 | 1 | + | VPS72 | 1 | + |
| exon-exon | SULF2 | 20 | - | NCOA3 | 20 | - |
| exon-intron | RTRAF | 14 | - | UNC13B | 9 | - |
| exon-exon | IGFBP7 | 4 | - | POLR2B | 4 | - |
| intron-exon | RPLP0P9 | 5 | - | MTMR10 | 15 | + |
| exon-exon | LOC112268423 | 2 | - | RABL2A | 2 | - |
| intron-exon | MACROD2 | 20 | - | HAVCR1 | 5 | + |
| intron-exon | ARHGAP15 | 2 | + | LAS1L | X | - |
| exon-exon | UHMK1 | 1 | - | PECAM1 | 17 | + |
| exon-exon | PCGF2 | 17 | - | CISD3 | 17 | - |
| exon-exon | BTD | 3 | - | FAM98B | 15 | - |
| intron-exon | IGH | 14 | + | IGHA1 | 14 | + |
| intron-exon | TSPOAP1-AS1 | 17 | + | RIPOR1 | 16 | - |
| exon-exon | CRIP2 | 14 | - | NAP1L4 | 11 | - |
| exon-exon | ODF3B | 22 | + | RNA45SN2 | 21 | - |
| exon-exon | MGRN1 | 16 | - | CRIM1 | 2 | - |
| intron-exon | POLR2J4 | 7 | + | C9orf78 | 9 | + |
| exon-intron | BHMT2 | 5 | - | THAP5 | 7 | + |
| exon-intron | SET | 9 | + | SET | 9 | - |
| exon-exon | SMAD2 | 18 | + | POSTN | 13 | + |
| exon-exon | KLHL22 | 22 | + | KLHL22 | 22 | - |
| exon-exon | TMEM101 | 17 | + | RASA4B | 7 | - |
| exon-exon | ATP1B2 | 17 | - | ALDH3A2 | 17 | - |
| exon-exon | CD27-AS1 | 12 | + | AAK1 | 2 | + |
| exon-intron | PRC1 | 15 | + | PRC1-AS1 | 15 | + |
| exon-exon | SPCS3 | 4 | - | SLC6A20 | 3 | + |
| intron-exon | NIBAN1 | 1 | + | CXCL16 | 17 | + |
| exon-exon | ABHD14A-ACY1 | 3 | - | MC1R | 16 | - |
| exon-intron | CAPN12 | 19 | - | LOC107985291 | 19 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | RBPJ | 4 | - | KIF5B | 10 | - |
| intron-exon | MYCBP2 | 13 | - | GPR155 | 2 | - |
| intron-exon | LINC02381 | 12 | + | CCDC149 | 4 | - |
| exon-exon | INVS | 9 | + | ND4 | MT | + |
| exon-intron | RCCD1 | 15 | - | KANK1 | 9 | - |
| exon-intron | LOC101928953 | 8 | - | MYPN | 10 | + |
| exon-intron | LRP6 | 12 | - | ARL10 | 5 | + |
| exon-intron | TMEM213 | 7 | + | BMS1 | 10 | + |
| exon-intron | GM2A | 5 | + | RANBP2 | 2 | + |
| exon-intron | ZSCAN16-AS1 | 6 | - | ZNF602P | 6 | - |
| exon-exon | MTF2 | 1 | - | TSC22D1 | 13 | + |
| exon-exon | PURA | 5 | - | RNA45SN3 | 21 | - |
| exon-exon | KCNA6 | 12 | - | KCNA6 | 12 | + |
| exon-exon | TIMP2 | 17 | + | SRGAP2 | 1 | - |
| exon-exon | TRIM28 | 19 | - | RNA45SN1 | 21 | - |
| exon-intron | IGKC | 2 | + | IGK | 2 | + |
| exon-intron | ZNF578 | 19 | - | ALKBH3 | 11 | + |
| exon-exon | PGM1 | 1 | - | PGM1 | 1 | + |
| exon-exon | PLEKHD1 | 14 | - | SLC39A9 | 14 | - |
| exon-exon | PXDN | 2 | + | PXDN | 2 | - |
| exon-exon | CBX3 | 7 | - | CCDC32 | 15 | + |
| exon-exon | COPE | 19 | + | GNPTG | 16 | - |
| exon-intron | LRRFIP1 | 2 | - | ARRB1 | 11 | + |
| exon-exon | STRN3 | 14 | - | STRN3 | 14 | + |
| intron-exon | NMNAT2 | 1 | - | LAMC2 | 1 | - |
| exon-exon | LENG9 | 19 | - | LENG8 | 19 | - |
| intron-exon | BMERB1 | 16 | + | MYH11 | 16 | + |
| exon-exon | PPP1R13B | 14 | - | RERE | 1 | + |
| intron-exon | IL7 | 8 | - | GSS | 20 | + |
| exon-exon | SERPINA1 | 14 | + | KREMEN1 | 22 | - |
| exon-exon | SNRPG | 2 | + | CLPB | 11 | - |
| exon-exon | PACS2 | 14 | - | ADGRA2 | 8 | + |
| intron-exon | AKAP10 | 17 | + | HNRNPA3 | 2 | - |
| exon-exon | RNA45SN2 | 21 | + | KRT10 | 17 | - |
| exon-intron | COL1A1 | 17 | + | GRID1 | 10 | + |
| exon-exon | MEIS2 | 15 | + | MEIS2 | 15 | - |
| exon-exon | HOMEZ | 14 | - | LOC105370406 | 14 | - |
| exon-exon | ND4 | MT | - | TIMM44 | 19 | + |
| exon-exon | RNA45SN1 | 21 | + | AGTRAP | 1 | + |
| exon-intron | RPS28 | 19 | - | ZHX2 | 8 | - |
| exon-intron | DUSP19 | 2 | + | AC064871.2 | 2 | + |
| intron-exon | LOC105372424 | 19 | - | IGFL2 | 19 | - |
| intron-exon | PRKN | 6 | + | PACRG | 6 | + |
| exon-intron | CALCOCO2 | 17 | - | KIF24 | 9 | - |
| exon-intron | MIR4307HG | 14 | - | AL132718.1 | 14 | - |
| exon-exon | MRPS26 | 20 | + | NAPSB | 19 | - |
| intron-exon | RAB2A | 8 | - | FLCN | 17 | + |
| exon-intron | DNAJC27-AS1 | 2 | - | DNAJC27 | 2 | - |
| intron-exon | RPAIN | 17 | + | COL3A1 | 2 | - |
| exon-intron | ELN | 7 | - | RNA28SP | 21 | - |
| exon-exon | ARF6 | 14 | + | ARF6 | 14 | - |
| exon-intron | RGPD1 | 2 | - | RANBP2 | 2 | - |
| intron-exon | FRMD4A | 10 | - | PRPF18 | 10 | - |
| intron-exon | LOC644215 | 10 | - | RRP12 | 10 | - |
| exon-intron | OGFRL1 | 6 | + | AL589935.1 | 6 | + |
| exon-intron | SWAP70 | 11 | - | H2BP2 | 1 | + |
| intron-exon | MRPS18A | 6 | - | RSPH9 | 6 | - |
| intron-exon | ORAI3 | 16 | - | FBXL19 | 16 | - |
| exon-exon | CCNI | 4 | - | TXLNGY | Y | + |
| exon-exon | CLDN15 | 7 | + | FIS1 | 7 | + |
| exon-intron | LOC100507562 | 2 | - | AC011752.1 | 2 | - |
| exon-exon | S100A11 | 1 | + | RBM39 | 20 | + |
| exon-intron | ATP6V1C2 | 2 | + | EIF4A2 | 3 | - |
| exon-intron | YES1 | 18 | + | SETD3 | 14 | + |
| exon-intron | RPS24 | 10 | - | CLSTN2 | 3 | - |
| exon-exon | KCNG1 | 20 | + | PRNP | 20 | - |
| exon-exon | DNMT1 | 19 | + | TALAM1 | 11 | - |
| exon-exon | AZGP1 | 7 | + | PCSK5 | 9 | - |
| exon-exon | EVX1 | 7 | - | RNA45SN2 | 21 | - |
| exon-exon | LOC105379251 | 9 | - | DUX4L50 | 9 | - |
| exon-intron | CNNM2 | 10 | + | AKAP13 | 15 | - |
| exon-intron | RBM3 | X | - | WWC1 | 5 | - |
| exon-exon | LOC105374137 | 3 | - | CHST2 | 3 | - |
| exon-exon | RNA45SN1 | 21 | - | TRERF1 | 6 | + |
| exon-exon | HIVEP3 | 1 | + | HIVEP3 | 1 | - |
| intron-exon | LOC101928953 | 8 | - | PPP1R16A | 8 | - |
| exon-exon | JPH4 | 14 | - | AP1G2 | 14 | - |
| exon-exon | MKRN1 | 7 | + | DPY30 | 2 | - |
| exon-exon | CCT4 | 2 | - | ATG5 | 6 | - |
| exon-exon | GSN | 9 | - | TSIX | X | + |
| exon-exon | RPP25L | 9 | + | TUBA1A | 12 | + |
| exon-exon | VIRMA | 8 | + | CMIP | 16 | - |
| exon-intron | ARHGAP6 | X | + | BACH2 | 6 | + |
| exon-exon | NFIX | 19 | - | LYL1 | 19 | - |
| exon-intron | NDUFA4L2 | 12 | + | LOC112163617 | 12 | + |
| intron-exon | LOC105377043 | 3 | - | MYH7B | 20 | - |
| exon-exon | H3-3A | 1 | - | H3P6 | 2 | + |
| exon-intron | GOLGA8IP | 15 | - | LOC101927846 | 15 | - |
| exon-exon | SEPTIN6 | X | + | GNB5 | 15 | - |
| exon-exon | CCNP | 19 | + | CCNP | 19 | - |
| intron-exon | ZNF263 | 16 | - | LINC00921 | 16 | - |
| exon-exon | RBM14 | 11 | - | RBM14 | 11 | + |
| exon-exon | LOC105372582 | 20 | - | LOC107985400 | 20 | - |
| exon-exon | PRELID1P6 | 2 | + | ABCA9 | 17 | + |
| exon-exon | COL1A2 | 7 | - | PARVA | 11 | - |
| exon-exon | ATP6AP2 | X | + | ARHGEF12 | 11 | + |
| intron-exon | FAM160A1 | 4 | + | GATB | 4 | + |
| exon-intron | REC8 | 14 | - | ZNF623 | 8 | - |
| exon-exon | MALAT1 | 11 | + | DDX12P | 12 | - |
| exon-intron | ATP1B3 | 3 | - | CIITA | 16 | - |
| exon-exon | AGBL5 | 2 | - | LAMB2P1 | 3 | + |
| exon-exon | MAP4K1 | 19 | + | LOC105372397 | 19 | + |
| intron-exon | LOC105373511 | 2 | - | CNOT11 | 2 | - |
| exon-exon | HSPA1A | 6 | - | FOXP1 | 3 | + |
| exon-exon | NBPF10 | 1 | + | ND5 | MT | - |
| exon-exon | BCL2L2-PABPN1 | 14 | - | CYP4F8 | 19 | - |
| exon-intron | SLC1A5 | 19 | + | KIAA1217 | 10 | - |
| exon-exon | PAEP | 9 | - | RNA45SN1 | 21 | - |
| exon-intron | KLK3 | 19 | - | LINC-PINT | 7 | + |
| exon-exon | PDSS2 | 6 | + | PDSS2 | 6 | - |
| exon-exon | CDC42EP1 | 22 | + | CIAO2B | 16 | - |
| exon-exon | VPS4B | 18 | - | ATP6V1A | 3 | + |
| intron-exon | GPC5 | 13 | + | CDYL | 6 | - |
| exon-exon | KLHDC10 | 7 | - | KLHDC10 | 7 | + |
| intron-exon | C16orf96 | 16 | + | ZNF500 | 16 | + |
| exon-intron | LOC105372081 | 18 | + | LINC01477 | 18 | + |
| intron-exon | AL357052.1 | 6 | + | LOC105374961 | 6 | + |
| exon-exon | LONP1 | 19 | - | RPL36P14 | 9 | - |
| intron-exon | AC090625.2 | 11 | - | SLC1A2 | 11 | - |
| exon-exon | GLIPR2 | 9 | - | GLIPR2 | 9 | + |
| exon-intron | ZIM2-AS1 | 19 | - | LOC105372472 | 19 | - |
| intron-exon | RP11-506N2.1 | 4 | + | LOC105377246 | 4 | + |
| intron-exon | CHTOP | 1 | + | S100A1 | 1 | + |
| exon-exon | PGM1 | 1 | - | CPSF2 | 14 | - |
| exon-exon | EIF2S3 | X | + | HNRNPA3 | 2 | + |
| intron-exon | LOC105376431 | 10 | + | STK11IP | 2 | - |
| intron-exon | MFSD4B | 6 | + | HSCB | 22 | - |
| exon-exon | SLC12A7 | 5 | + | COPZ2 | 17 | + |
| exon-exon | CAVIN1 | 17 | + | CDC42EP5 | 19 | - |
| exon-intron | LGALS3 | 14 | + | NBEA | 13 | - |
| exon-exon | ATF5 | 19 | - | VPS13D | 1 | - |
| exon-exon | LIFR | 5 | + | TPM3 | 1 | + |
| exon-exon | SALL3 | 18 | - | LOC112268284 | 21 | - |
| exon-intron | ACOT2 | 14 | - | HEATR4 | 14 | - |
| intron-exon | AC096637.2 | 1 | - | LOC91548 | 1 | - |
| exon-exon | TSC22D1 | 13 | + | RACK1 | 5 | + |
| exon-exon | ACTR10 | 14 | - | TAGLN2 | 1 | + |
| exon-exon | RNF11 | 1 | - | RNF11 | 1 | + |
| intron-exon | ZFP82 | 19 | + | ZNF260 | 19 | + |
| exon-exon | LOC107986215 | 4 | - | RASGEF1B | 4 | - |
| exon-exon | PAQR7 | 1 | + | XIAP | X | - |
| exon-exon | EIF3H | 8 | + | DCAF11 | 14 | - |
| intron-exon | LOC108783649 | 19 | - | AMH | 19 | - |
| exon-exon | BRF2 | 8 | - | ADGRA2 | 8 | - |
| exon-exon | SPTBN1 | 2 | - | SERPINB1 | 6 | + |
| exon-exon | STK39 | 2 | + | PCNX1 | 14 | - |
| exon-intron | AHCYL1 | 1 | - | CDK6 | 7 | + |
| exon-intron | ARHGEF1 | 19 | - | KLHL24 | 3 | - |
| exon-exon | TTC23L | 5 | + | RAD1 | 5 | + |
| intron-exon | PLXDC1 | 17 | + | FBXL20 | 17 | + |
| intron-exon | GABPB1-AS1 | 15 | - | GABPB1 | 15 | - |
| exon-exon | CDIP1 | 16 | - | KCNK6 | 19 | + |
| exon-intron | TAF15 | 17 | - | ARHGAP26 | 5 | + |
| exon-exon | MSN | X | - | CNST | 1 | - |
| intron-exon | WSB2 | 12 | - | RFC5 | 12 | - |
| exon-exon | CD74 | 5 | + | RNA45SN2 | 21 | - |
| exon-exon | DAZAP2 | 12 | - | PTMA | 2 | - |
| intron-exon | CDC40 | 6 | + | QSOX1 | 1 | - |
| exon-intron | RPS20P10 | 2 | + | GLIDR | 9 | + |
| exon-exon | LOC727803 | 12 | - | POLR1B | 2 | + |
| exon-intron | CPNE1 | 20 | + | DCAF11 | 14 | - |
| exon-exon | ZNF532 | 18 | + | ZNF532 | 18 | - |
| exon-exon | SORBS2 | 4 | + | SORBS2 | 4 | - |
| intron-exon | TMX2-CTNND1 | 11 | - | ARHGEF10L | 1 | - |
| exon-exon | COL1A1 | 17 | + | TNXB | 6 | + |
| intron-exon | LOC100996737 | 1 | - | LINC02802 | 1 | + |
| exon-intron | PKM | 15 | + | CSDC2 | 22 | - |
| intron-exon | TXNL4A | 18 | - | TUBB4B | 9 | - |
| exon-intron | AP3D1 | 19 | + | COL19A1 | 6 | + |
| exon-exon | RPL39P3 | 6 | + | POLR1B | 2 | - |
| exon-exon | AGPAT4 | 6 | + | FGD5-AS1 | 3 | + |
| intron-exon | HSF5 | 17 | + | ZNF70 | 22 | + |
| intron-exon | RNF212B | 14 | + | HOMEZ | 14 | + |
| exon-exon | RPS8P8 | 5 | - | WAC | 10 | - |
| exon-exon | EFNA1 | 1 | - | BRD2 | 6 | - |
| exon-intron | MOAP1 | 14 | + | SNHG31 | 2 | - |
| exon-intron | RTN4 | 2 | + | RTN4 | 2 | - |
| exon-exon | PHYHD1 | 9 | + | LRRC8A | 9 | + |
| exon-intron | TNF | 6 | + | TNF | 6 | - |
| exon-exon | EFHD1 | 2 | - | TRAPPC3 | 1 | + |
| exon-exon | RASL10A | 22 | + | RASL10A | 22 | - |
| exon-intron | LMF1 | 16 | + | LOC107987382 | 16 | + |
| exon-exon | GTF2I | 7 | + | NCL | 2 | - |
| exon-exon | MAP4K3 | 2 | - | MAP4K3 | 2 | + |
| intron-exon | LRRC37A5P | 9 | + | LOC107987116 | 9 | + |
| intron-exon | LINC00501 | 3 | + | GFER | 16 | - |
| exon-exon | TIMM8B | 11 | - | NKAPD1 | 11 | - |
| exon-intron | ABCA3 | 16 | + | LOC105371453 | 1 | - |
| intron-exon | SMC5-AS1 | 9 | - | MECP2 | X | + |
| intron-exon | IGH | 14 | + | IGHA1 | 14 | + |
| exon-exon | H1-0 | 22 | - | C16orf46 | 16 | + |
| exon-exon | GPR37L1 | 1 | - | PLXNB3 | X | - |
| intron-exon | KCTD1 | 18 | + | FBXL19 | 16 | - |
| exon-exon | ZNF800 | 7 | + | ZNF800 | 7 | - |
| exon-exon | MYO1E | 15 | + | HNRNPA2B1 | 7 | - |
| intron-exon | AC100793.4 | 17 | + | DST | 6 | + |
| intron-exon | LOC111240475 | 17 | + | HSD17B1 | 17 | + |
| intron-exon | CCDC51 | 3 | - | PTAR1 | 9 | + |
| exon-exon | COL6A1 | 21 | - | AZIN1 | 8 | + |
| exon-exon | ATXN7L3B | 12 | - | PLD5 | 1 | + |
| exon-intron | RNA45SN3 | 21 | + | BFAR | 16 | - |
| intron-exon | LOC107984026 | 10 | - | BMS1P2-AGAP9 | 10 | + |
| exon-exon | POLRMT | 19 | + | ZFP36L1 | 14 | + |
| exon-exon | LOC102723596 | 3 | + | LOC105376942 | 3 | + |
| exon-exon | EEF2 | 19 | + | NXF1 | 11 | - |
| intron-exon | KIF13B | 8 | + | CHD2 | 15 | - |
| exon-intron | FMO6P | 1 | + | PTPN14 | 1 | + |
| intron-exon | CFB | 6 | - | NCL | 2 | + |
| exon-exon | BCOR | X | + | CHCHD7 | 8 | - |
| exon-exon | ND4 | MT | + | ANKRD17 | 4 | - |
| exon-exon | RPS24 | 10 | - | IPO7 | 11 | + |
| exon-intron | ND4 | MT | - | SSH2 | 17 | + |
| exon-exon | ND4 | MT | + | MYOF | 10 | + |
| exon-intron | H2BC5 | 6 | - | WAPL | 10 | - |
| exon-intron | COG3 | 13 | + | AGA | 4 | - |
| exon-exon | ARHGAP1 | 11 | + | ARHGAP1 | 11 | - |
| exon-exon | EEF2 | 19 | + | TAPBP | 6 | + |
| exon-exon | FLNB | 3 | - | FLNB | 3 | + |
| exon-exon | NOP53 | 19 | - | NOP53 | 19 | + |
| exon-exon | PPP1CA | 11 | + | ECE1 | 1 | + |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| exon-exon | GON4L | 1 | - | SOX13 | 1 | - |
| exon-exon | IFIH1 | 2 | + | IFIH1 | 2 | - |
| exon-exon | ZFYVE1 | 14 | - | ND2 | MT | + |
| exon-exon | ACO2 | 22 | - | ACO2 | 22 | + |
| exon-exon | CNDP2 | 18 | + | ALKBH5 | 17 | - |
| exon-exon | ALDH2 | 12 | + | ALDH2 | 12 | - |
| intron-exon | RHBDF1 | 16 | + | RHBDF1 | 16 | - |
| exon-exon | ITPR3 | 6 | - | LOC105373085 | 22 | + |
| exon-exon | RSRC2 | 12 | - | NIPBL | 5 | + |
| intron-exon | MTATP6P1 | 1 | - | MPHOSPH8 | 13 | + |
| exon-exon | RPL28 | 19 | + | RPL28 | 19 | - |
| exon-exon | VCP | 9 | - | VCP | 9 | + |
| exon-intron | ANKLE2 | 12 | - | NFAT5 | 16 | - |
| intron-exon | FLNB-AS1 | 3 | - | FLNB | 3 | - |
| exon-exon | SLC22A17 | 14 | - | SLC22A17 | 14 | + |
| intron-exon | ND5 | MT | + | ATP6 | MT | + |
| exon-exon | MDK | 11 | - | FTH1 | 11 | - |
| intron-exon | CPB1 | 3 | - | NEAT1 | 11 | - |
| intron-exon | TLCD4-RWDD3 | 1 | + | OFD1 | X | - |
| exon-exon | TFAM | 10 | - | RPS11 | 19 | + |
| intron-exon | NFKB1 | 4 | + | PSMB4 | 1 | + |
| exon-intron | EIF4E | 4 | - | ASAP2 | 2 | + |
| exon-intron | FCGR2A | 1 | + | FRMPD1 | 9 | + |
| exon-exon | ZNF335 | 20 | + | VPS25 | 17 | + |
| exon-exon | LGALS3BP | 17 | + | LGALS3BP | 17 | - |
| exon-intron | TALAM1 | 11 | - | ESR1 | 6 | + |
| exon-exon | ND5 | MT | - | ATP6 | MT | - |
| intron-exon | HERC3 | 4 | - | HERC3 | 4 | + |
| exon-intron | ACTB | 7 | + | INTS4 | 11 | - |
| exon-intron | RPS23 | 5 | - | RPS24 | 10 | + |
| exon-exon | GALNT6 | 12 | + | GALNT6 | 12 | - |
| exon-exon | CHD2 | 15 | - | CHD2 | 15 | + |
| exon-exon | JPT2 | 16 | + | ARPC2 | 2 | - |
| exon-intron | SPARC | 5 | + | WASHC2A | 10 | - |
| exon-exon | VAT1 | 17 | - | GOLM1 | 9 | + |
| exon-intron | TAGLN2 | 1 | + | ZXDC | 3 | - |
| intron-exon | MUC5B-AS1 | 11 | - | MUC5B | 11 | + |
| exon-intron | ICE2 | 15 | + | ENG | 9 | - |
| exon-exon | KRR1 | 12 | - | GLIPR1 | 12 | - |
| intron-exon | LOC112268138 | 14 | + | IGHG1 | 14 | + |
| exon-exon | MGST1 | 12 | - | CRYZ | 1 | + |
| exon-intron | PCDHB19P | 5 | + | PCDHB@ | 5 | + |
| intron-exon | PRR7-AS1 | 5 | + | PRR7 | 5 | + |
| exon-exon | LOC112268184 | 17 | - | NPEPPS | 17 | - |
| exon-intron | SPAG16 | 2 | - | ZNF677 | 19 | + |
| exon-exon | FAAP20 | 1 | - | PRKCZ | 1 | - |
| exon-intron | TRMT2B | X | + | PCGF6 | 10 | + |
| intron-exon | MTA3 | 2 | + | AP3D1 | 19 | - |
| intron-exon | LOC112268149 | 15 | - | STRIT1 | 3 | - |
| exon-exon | YAF2 | 12 | + | APOD | 3 | - |
| exon-intron | DNAJC22 | 12 | - | ITM2B | 13 | - |
| exon-intron | EIF3I | 1 | - | CTNNA1 | 5 | - |
| exon-exon | BSG | 19 | - | TPM1-AS | 15 | - |
| exon-exon | S100A6 | 1 | + | AP2A1 | 19 | - |
| exon-intron | PKM | 15 | + | ITGA6 | 2 | - |
| exon-exon | SND1 | 7 | - | BET1L | 11 | + |
| exon-intron | TIMP2 | 17 | + | LOC105369844 | 12 | + |
| exon-intron | RACK1 | 5 | + | SRSF4 | 1 | + |
| exon-intron | WRNIP1 | 6 | - | GMDS-DT | 6 | - |
| intron-exon | LOC643441 | 1 | + | RPS15P1 | 1 | + |
| exon-intron | TFCP2 | 12 | + | LOC105373966 | 2 | - |
| exon-exon | INPPL1 | 11 | - | YBX1 | 1 | - |
| exon-intron | DCAF10 | 9 | - | ATP1B1 | 1 | - |
| exon-exon | CATSPER2 | 15 | + | PPIP5K1P1 | 15 | + |
| exon-intron | CHAF1A | 19 | - | APP | 21 | + |
| exon-exon | TOMM20 | 1 | + | CDH20 | 18 | - |
| intron-exon | CELF2-AS1 | 10 | - | PTGES3L-AARSD1 | 17 | + |
| exon-intron | C9orf78 | 9 | + | SRSF11 | 1 | - |
| exon-intron | GPRC5A | 12 | - | XRN2 | 20 | - |
| exon-exon | CLCN3 | 4 | - | NFATC3 | 16 | - |
| exon-exon | C11orf49 | 11 | - | VMA21 | X | - |
| intron-exon | ZNF32-AS3 | 10 | + | LOC107986064 | 3 | - |
| exon-exon | RASAL1 | 12 | + | ARL4C | 2 | + |
| exon-exon | LOC101927610 | 7 | + | AZGP1 | 7 | + |
| exon-exon | QTRT1 | 19 | - | IRF2BP2 | 1 | + |
| exon-exon | APOBEC3F | 22 | - | HGSNAT | 8 | - |
| exon-exon | CCDC51 | 3 | + | SHISA5 | 3 | + |
| exon-exon | PNISR | 6 | + | ND2 | MT | + |
| exon-intron | LOC101928283 | 7 | - | HSPA12A | 10 | + |
| exon-exon | RAB7A | 3 | - | RPL29 | 3 | + |
| intron-exon | NUTM2A-AS1 | 10 | - | NUTM2B-AS1 | 10 | + |
| exon-intron | ORAI2 | 7 | - | ZNF618 | 9 | - |
| intron-exon | C21orf91-OT1 | 21 | + | C21orf91 | 21 | + |
| exon-exon | ANXA5 | 4 | + | ANXA5 | 4 | - |
| intron-exon | WDR47 | 1 | - | SUGT1P4-STRA6LP-CCDC180 | 9 | - |
| exon-intron | GRHPR | 9 | - | LCLAT1 | 2 | - |
| exon-exon | PDCD11 | 10 | - | FYCO1 | 3 | + |
| exon-exon | CD82 | 11 | - | DBR1 | 3 | + |
| exon-intron | FRMD6 | 14 | - | RNR2 | MT | + |
| exon-exon | CTSB | 8 | + | TNFRSF10B | 8 | + |
| exon-exon | ANKRD11P2 | X | - | ANKRD11 | 16 | + |
| exon-intron | ND2 | MT | - | ZNF577 | 19 | + |
| exon-exon | NDUFA11 | 19 | + | ZFP36 | 19 | - |
| exon-intron | BTN3A2 | 6 | - | PRSS23 | 11 | + |
| exon-exon | CDC37L1-DT | 9 | + | AK3 | 9 | + |
| exon-intron | EIF3I | 1 | - | IQCJ-SCHIP1 | 3 | - |
| exon-intron | GTF2H2B | 5 | - | LOC107986356 | 5 | - |
| exon-intron | TMEM63A | 1 | - | KLHDC4 | 16 | - |
| exon-exon | HNRNPUL1 | 19 | - | PDXDC1 | 16 | - |
| exon-exon | PKM | 15 | + | SAFB | 19 | - |
| exon-exon | CSGALNACT2 | 10 | - | CSGALNACT2 | 10 | + |
| exon-exon | NOP10 | 15 | + | NOP10 | 15 | - |
| exon-exon | NNMT | 11 | - | PNPO | 17 | - |
| exon-exon | PAFAH1B1 | 17 | - | ELOVL7 | 5 | + |
| exon-intron | KIF5B | 10 | - | LOC101926913 | 2 | + |
| exon-exon | SRSF6 | 20 | + | SRSF6 | 20 | - |
| exon-exon | RPS27AP16 | 16 | + | RNA45SN2 | 21 | - |
| exon-exon | RPL19P4 | 2 | - | DTD1 | 20 | - |
| intron-exon | LOC107985034 | 17 | + | PATZ1 | 22 | + |
| exon-intron | CTXN1 | 19 | + | TIMM44 | 19 | + |
| intron-exon | FCGRT | 19 | - | LOC105378281 | 10 | - |
| intron-exon | LOC105373194 | X | - | UBA1 | X | - |
| exon-exon | EIF3L | 22 | - | DHCR24 | 1 | + |
| intron-exon | SH3PXD2B | 5 | + | PPP1R11 | 6 | - |
| exon-intron | LDB1 | 10 | - | ITGB4 | 17 | + |
| exon-exon | CLU | 8 | + | RNA45SN2 | 21 | - |
| exon-exon | ZNF219 | 14 | - | ARHGEF40 | 14 | - |
| intron-exon | EIF4B | 12 | + | LOC283335 | 12 | + |
| intron-exon | AC006547.1 | 22 | - | TANGO2 | 22 | - |
| intron-exon | ACSBG2 | 19 | + | IGFBP5 | 2 | + |
| exon-intron | NKTR | 3 | + | ZBTB47 | 3 | + |
| intron-exon | AC112695.1 | 4 | + | GRID2 | 4 | + |
| exon-intron | MSR1 | 8 | + | PKP2 | 12 | - |
| exon-exon | ASB6 | 9 | - | TMEM120A | 7 | - |
| exon-exon | ABO | 9 | - | PIGR | 1 | + |
| exon-intron | CTSB | 8 | - | LOC105373609 | 2 | - |
| exon-exon | CDV3 | 3 | + | CDV3 | 3 | - |
| exon-exon | GRB2 | 17 | + | GRB2 | 17 | - |
| intron-exon | TMC5 | 16 | + | HSP90B1 | 12 | - |
| exon-exon | GOLGB1 | 3 | + | ND4 | MT | + |
| intron-exon | NUP88 | 17 | - | SCIMP | 17 | - |
| exon-exon | NEURL1 | 10 | + | SH3PXD2A | 10 | + |
| exon-exon | NOC2L | 1 | + | ZFYVE27 | 10 | - |
| intron-exon | SMG1P3 | 16 | + | SLC7A5P2 | 16 | + |
| intron-exon | SHLD2 | 10 | + | NUTM2A-AS1 | 10 | + |
| intron-exon | CORO7-PAM16 | 16 | - | FTSJ3 | 17 | + |
| exon-exon | CD4 | 12 | - | NEAT1 | 11 | - |
| intron-exon | LOC107985522 | 1 | - | RNA45SN3 | 21 | - |
| exon-intron | KIFC2 | 8 | + | POMP | 13 | - |
| exon-exon | RAVER1 | 19 | + | RNA45SN1 | 21 | - |
| exon-exon | AGFG1 | 2 | + | NECTIN3 | 3 | + |
| exon-intron | TRDMT1 | 10 | + | ZNF350-AS1 | 19 | + |
| exon-exon | TNFSF10 | 3 | + | CES4A | 16 | - |
| exon-exon | ZNF791 | 19 | - | ZC3HAV1L | 7 | + |
| exon-exon | BCL2L12 | 19 | - | LENG8 | 19 | - |
| exon-exon | LENG1 | 19 | - | CNOT3 | 19 | - |
| intron-exon | ADGRE2 | 19 | - | RNA45SN3 | 21 | - |
| exon-exon | TOP3A | 17 | + | DMD | X | + |
| exon-exon | SF3B4 | 1 | + | PRAG1 | 8 | + |
| exon-exon | ERCC8 | 5 | + | ERCC8-AS1 | 5 | + |
| exon-exon | PCNP | 3 | - | PCCA | 13 | - |
| exon-exon | MT2A | 16 | - | FASN | 17 | + |
| intron-exon | LOC101929937 | 20 | - | NRSN2 | 20 | - |
| exon-exon | FRMD4B | 3 | + | SLC22A17 | 14 | + |
| exon-exon | RPL14 | 3 | - | E2F4 | 16 | - |
| exon-exon | GNPTG | 16 | - | SREBF1 | 17 | + |
| exon-exon | MYL6 | 12 | - | DST | 6 | + |
| exon-exon | FYN | 6 | + | COL6A3 | 2 | + |
| exon-exon | LTBP4 | 19 | - | LTBP4 | 19 | + |
| exon-exon | RNA45SN2 | 21 | - | CACNG4 | 17 | - |
| exon-exon | MEIS3 | 19 | + | TSIX | X | + |
| intron-exon | AP001767.3 | 11 | - | RAB30-DT | 11 | - |
| exon-exon | C15orf39 | 15 | - | TEAD4 | 12 | - |
| exon-exon | RNA45SN3 | 21 | + | LIN7B | 19 | + |
| intron-exon | LOC110121285 | 1 | - | CELSR2 | 1 | - |
| exon-exon | PPM1G | 2 | + | DDX25 | 11 | - |
| exon-exon | PTP4A1 | 6 | - | BCLAF3 | X | + |
| intron-exon | RASSF1 | 3 | + | ND2 | MT | - |
| intron-exon | CRYZL1 | 21 | + | TMEM127 | 2 | + |
| exon-exon | LLPH | 12 | + | EHD4 | 15 | + |
| exon-intron | IFI6 | 1 | + | LOC105371493 | 17 | - |
| exon-intron | TLCD3B | 16 | - | C3orf20 | 3 | - |
| intron-exon | AL353626.1 | 9 | - | LOC100132004 | 9 | - |
| intron-exon | LOC102723935 | 1 | + | METTL2A | 17 | - |
| exon-exon | B4GALT1 | 9 | + | NUDT8 | 11 | - |
| intron-exon | LOC102724687 | 8 | - | HMBOX1 | 8 | + |
| exon-exon | PPP1R35 | 7 | + | PPP1R35-AS1 | 7 | + |
| exon-exon | PRKDC | 8 | + | PRKDC | 8 | - |
| intron-exon | ZFHX3 | 16 | - | APMAP | 20 | - |
| exon-exon | FAM219A | 9 | + | FAM219A | 9 | - |
| exon-intron | PLXND1 | 3 | + | LOC105370052 | 12 | - |
| intron-exon | AL024498.2 | 6 | - | TMEM14B | 6 | - |
| intron-exon | CHD1L | 1 | + | SKP2 | 5 | - |
| exon-intron | ZNF736 | 7 | - | MGAT4C | 12 | + |
| intron-exon | NACA | 12 | + | PRIM1 | 12 | + |
| exon-exon | B4GALT4 | 3 | + | B4GALT4-AS1 | 3 | + |
| exon-exon | MCL1 | 1 | - | GARS1 | 7 | + |
| exon-intron | SDHAP2 | 3 | - | TBC1D2B | 15 | + |
| exon-exon | RNA45SN1 | 21 | - | RMRP | 9 | + |
| exon-exon | C6orf89 | 6 | - | SH3PXD2A | 10 | + |
| exon-intron | TAGLN | 11 | + | SUCLA2 | 13 | + |
| exon-intron | LOC100134317 | 19 | - | AC092296.2 | 19 | - |
| intron-exon | LINC01010 | 6 | + | LOC101928304 | 6 | + |
| exon-exon | EBAG9 | 8 | - | EBAG9 | 8 | + |
| exon-intron | C1R | 12 | + | BAIAP2L1 | 7 | - |
| exon-exon | SHISA8 | 22 | - | SREBF2 | 22 | - |
| exon-exon | TBRG1 | 11 | - | TBRG1 | 11 | + |
| exon-exon | NCOA4 | 10 | + | CD163 | 12 | + |
| exon-intron | ACSL6 | 5 | + | AC034228.2 | 5 | + |
| exon-exon | TACC1 | 8 | - | PLXNB2 | 22 | + |
| exon-exon | GRIN1 | 9 | - | SNRNP70 | 19 | - |
| exon-exon | RNA45SN1 | 21 | - | FBXO42 | 1 | + |
| exon-exon | APBB3 | 5 | + | RASSF4 | 10 | - |
| exon-exon | STK39 | 2 | + | PCNX1 | 14 | - |
| exon-exon | PLCB3 | 11 | - | ESS2 | 22 | + |
| exon-exon | SPRED1 | 15 | - | MNT | 17 | + |
| intron-exon | LOC112268284 | 21 | - | DAXX | 6 | + |
| exon-intron | SNX32 | 11 | + | BCR | 22 | - |
| exon-exon | KCNK15-AS1 | 20 | - | KCNK15 | 20 | + |
| exon-exon | HSP90AA1 | 14 | + | HSP90AB3P | 4 | + |
| exon-exon | SFPQ | 1 | + | HSPD1 | 2 | + |
| intron-exon | IGL | 22 | - | SERINC5 | 5 | + |
| exon-exon | TAF8 | 6 | - | CRK | 17 | + |
| exon-exon | MT2A | 16 | - | RNA45SN3 | 21 | - |
| intron-exon | REEP3 | 10 | + | HP1BP3 | 1 | + |
| exon-exon | CEP170B | 14 | - | RNA45SN2 | 21 | - |
| intron-exon | DDAH1 | 1 | + | RNA45SN1 | 21 | - |
| exon-exon | TFAP2A | 6 | + | LOC441722 | 15 | + |
| exon-intron | POFUT1 | 20 | - | CCDC50 | 3 | - |
| exon-exon | LOC112268155 | 15 | - | ABHD2 | 15 | - |
| exon-intron | DCAF7 | 17 | - | LINC02808 | 1 | - |
| intron-exon | ITFG2 | 12 | + | FASN | 17 | + |
| exon-exon | RPS27P17 | 7 | + | SLC25A4 | 4 | - |
| exon-exon | ACTG2 | 2 | - | PRKCI | 3 | - |
| exon-exon | SHFL | 19 | - | ANGPTL6 | 19 | - |
| intron-exon | ARL10 | 5 | - | BMS1P14 | 2 | - |
| intron-exon | CDHR3 | 7 | - | RBM47 | 4 | - |
| exon-exon | MTPN | 7 | + | LUZP6 | 7 | + |
| exon-exon | CST3 | 20 | + | RNA45SN1 | 21 | - |
| exon-exon | PTGS1 | 9 | - | SYNPO2 | 4 | - |
| exon-intron | ENO2 | 12 | + | ATN1 | 12 | + |
| exon-exon | RPL23 | 17 | + | RPL23 | 17 | - |
| intron-exon | LOC105379243 | 8 | - | NEIL2 | 8 | - |
| exon-intron | SLC44A4 | 6 | + | CD24 | 6 | + |
| exon-exon | GATA2 | 3 | + | LAMP2 | X | + |
| exon-exon | HMGN1 | 21 | + | LOC105370687 | 14 | + |
| exon-exon | KCNAB1 | 3 | + | CPEB4 | 5 | - |
| exon-exon | RSL1D1 | 16 | + | RSL1D1 | 16 | - |
| exon-exon | LOXL3 | 2 | - | HTRA2 | 2 | - |
| exon-exon | TXNDC11 | 16 | + | TSPAN14 | 10 | - |
| exon-intron | CCDC88A | 2 | + | LINC02224 | 5 | + |
| exon-exon | GNAI1 | 7 | - | TALAM1 | 11 | - |
| exon-exon | EFNA5 | 5 | + | RPS23 | 5 | + |
| exon-intron | UBB | 17 | - | CHRM3-AS2 | 1 | - |
| intron-exon | GOLT1A | 1 | + | IL10RB | 21 | - |
| exon-exon | POP5 | 12 | + | SRRM2 | 16 | - |
| exon-exon | CELA3A | 1 | - | CELA3B | 1 | - |
| exon-intron | BFAR | 16 | - | PBX1 | 1 | - |
| exon-exon | FUS | 16 | - | ACTN4 | 19 | - |
| exon-intron | LMNB1 | 5 | - | CALD1 | 7 | - |
| exon-intron | SMARCD2 | 17 | + | LOC107988032 | X | + |
| exon-intron | IGLL5 | 22 | - | DIAPH2 | X | + |
| exon-exon | PROM2 | 2 | - | HEATR5A | 14 | + |
| intron-exon | LOC105373971 | 2 | - | PPP1R7 | 2 | - |
| exon-intron | SDR42E1 | 16 | - | AC092142.2 | 16 | - |
| intron-exon | LOC102723945 | 16 | - | ND5 | MT | - |
| exon-intron | LOC105378419 | 10 | - | LIPA | 10 | - |
| exon-intron | CCDC69 | 5 | + | DUBR | 3 | + |
| exon-exon | APLP2 | 11 | - | APLP2 | 11 | + |
| exon-exon | APLP2 | 11 | - | ZNF652 | 17 | - |
| exon-exon | EIF3I | 1 | - | ANKRD42 | 11 | - |
| exon-exon | CST3 | 20 | + | ATP1A1-AS1 | 1 | - |
| exon-exon | CLTC | 17 | - | FCHO2 | 5 | + |
| exon-intron | INTS8 | 8 | + | ANK2 | 4 | + |
| intron-exon | UBE2Q2P2 | 15 | + | TSNAX-DISC1 | 1 | - |
| exon-exon | HNRNPH1 | 5 | - | HNRNPH1 | 5 | + |
| exon-intron | CLEC14A | 14 | + | FXYD6-FXYD2 | 11 | + |
| exon-intron | PSMG3 | 7 | + | IL10RA | 11 | - |
| exon-intron | ARHGAP31 | 3 | - | CEP83 | 12 | + |
| exon-exon | PILRB | 7 | - | STAG3L5P | 7 | - |
| exon-intron | ASRGL1 | 11 | - | ASTN1 | 1 | + |
| exon-exon | RGS20 | 8 | + | TCEA1 | 8 | + |
| intron-exon | LOC105372733 | 21 | + | TFCP2L1 | 2 | + |
| exon-intron | ARCN1 | 11 | - | JAKMIP2 | 5 | + |
| exon-intron | DHFR | 5 | + | PSME4 | 2 | + |
| exon-exon | BRD2 | 6 | - | SLC39A11 | 17 | + |
| exon-intron | CCDC66 | 3 | - | ASAP1 | 8 | + |
| exon-exon | ANP32A | 15 | - | TPR | 1 | - |
| exon-exon | NUCKS1 | 1 | + | WNK1 | 12 | - |
| exon-intron | SERF2-C15ORF63 | 15 | - | RP11-739L10.1 | 18 | - |
| exon-intron | MUC13 | 3 | + | CDKN2B-AS1 | 9 | + |
| exon-exon | SH3BGRL3 | 1 | - | IQGAP1 | 15 | - |
| intron-exon | LOC112268138 | 14 | + | IGHG3 | 14 | + |
| exon-exon | TCP1 | 6 | - | ACAT2 | 6 | - |
| exon-exon | UVSSA | 4 | + | DGCR8 | 22 | + |
| exon-exon | SLC9A1 | 1 | + | COL4A1 | 13 | + |
| exon-exon | PDE6D | 2 | - | PDE6D | 2 | + |
| exon-intron | WWP2 | 16 | + | NFIA | 1 | + |
| exon-exon | TSPEAR | 21 | - | TSPEAR-AS1 | 21 | + |
| exon-exon | EFNA2 | 19 | + | EFNA2 | 19 | - |
| exon-intron | SEC14L2 | 22 | - | IGH | 14 | - |
| exon-intron | IGHV4-34 | 14 | - | IGH | 14 | - |
| exon-exon | MATR3 | 5 | + | MATR3 | 5 | - |
| intron-exon | WDR70 | 5 | + | NCR2 | | + |
| exon-intron | EWSR1 | 22 | + | FLI1 | 11 | + |
| intron-exon | FLI1 | 11 | + | EWSR1 | 22 | + |
| exon-intron | EWSR1 | 22 | + | FLI1 | 11 | + |
| intron-exon | FLI1 | 11 | + | EWSR1 | 22 | + |
| exon-intron | EWSR1 | 22 | + | FLI1 | 11 | + |
| exon-intron | EWSR1 | 22 | + | FLI1 | 11 | + |
| exon-exon | IGLV3-21 | 22 | + | IGLV3-1 | 22 | + |
| exon-intron | THRAP3 | 1 | - | LINC02730 | 11 | + |
| exon-intron | IGKV3-11 | | - | IGK | 2 | - |
| exon-exon | IGHV3-30 | 14 | - | IGHV3-21 | 14 | - |
| exon-exon | TAF15 | 17 | + | NR4A3 | 9 | + |
| exon-exon | KIF1A | 2 | + | KIF1A | 2 | - |
| exon-exon | KAT6A | 8 | - | CREBBP | 16 | - |
| exon-exon | CREBBP | 16 | - | KAT6A | 8 | - |
| exon-exon | CAMK2B | | - | COX3 | MT | + |
| intron-exon | WASHC2C | 10 | - | HOXB6 | 17 | - |
| exon-exon | RNA45SN1 | 21 | + | LAPTM4B | 8 | + |
| exon-exon | COX2 | MT | - | TRIM63 | 1 | - |
| exon-exon | KRT1 | 12 | + | TMPO | 12 | - |
| exon-exon | FUS | 16 | + | ATF1 | 12 | + |
| exon-exon | PCM1 | 8 | + | RET | 10 | + |
| exon-exon | BMS1P20 | 22 | + | IGLV1-36 | 22 | + |
| exon-intron | IGLV1-40 | 22 | + | IGL | 22 | + |
| exon-exon | BCR | 22 | + | FGFR1 | 8 | - |
| exon-exon | FGFR1 | 8 | - | BCR | 22 | + |
| exon-exon | KAT6B | 10 | + | CREBBP | 16 | - |
| exon-exon | CREBBP | 16 | - | KAT6B | 10 | + |
| exon-exon | FUS | 16 | + | DDIT3 | 12 | - |
| exon-intron | FUS | 16 | + | DDIT3 | 12 | - |
| exon-exon | RBM15 | 1 | + | MRTFA | 22 | - |
| exon-intron | MRTFA | 22 | - | RBM15 | 1 | + |
| exon-exon | COX6A2 | 16 | - | MYL3 | 3 | - |
| exon-exon | RNA45SN1 | 21 | + | EEF1A2 | 20 | - |
| exon-intron | TRBV20-1 | 7 | + | TRB | 7 | + |
| intron-exon | AFF1 | 4 | + | KMT2A | 11 | + |
| exon-intron | KMT2A | 11 | + | AFF1 | 4 | + |
| exon-exon | PML | 15 | + | RARA | 17 | + |
| intron-exon | PLSCR1 | 3 | - | KAT6A | 8 | - |
| exon-intron | LPCAT2 | 16 | + | BLOC1S5-TXNDC5 | 6 | - |
| exon-exon | TRBJ2-2 | | + | TRBC2 | 7 | + |
| exon-exon | NUP98 | 11 | - | HOXC13 | 12 | + |
| exon-intron | IGLV2-14 | 22 | + | IGL | 22 | + |
| intron-exon | IGHV3-65 | | - | IGHV3-53 | 14 | - |
| exon-intron | MALAT1 | 11 | + | TFEB | 6 | - |
| intron-exon | TFEB | | - | MALAT1 | 11 | + |
| exon-exon | FUS | 16 | + | CREB3L2 | 7 | - |
| exon-exon | CREB3L2 | 7 | - | FUS | 16 | + |
| exon-exon | IGHV3-21 | 14 | - | IGHV3-11 | 14 | - |
| exon-exon | DGAT1 | 8 | - | NOP53 | 19 | + |
| exon-exon | PYCR2 | 1 | - | TNNI1 | 1 | - |
| exon-intron | OBSCN | 1 | + | TFDP2 | 3 | - |
| exon-exon | KIF1C | 17 | + | MB | 22 | - |
| exon-intron | RPS25P6 | 5 | - | ARL14EPL | 5 | - |
| intron-exon | IGH | 14 | - | IGHJ2 | 14 | - |
| exon-exon | IGHV4-34 | 14 | - | IGHV4-4 | 14 | - |
| exon-intron | IGHV4-34 | 14 | - | IGH | 14 | - |
| exon-exon | IGHV3-65 | | - | IGHV3-53 | 14 | - |
| exon-exon | TRGV9 | | - | TARP | | - |
| intron-exon | SCARF2 | 22 | - | USP41 | 22 | - |
| exon-intron | MYC | 8 | - | IGH | 14 | - |
| exon-intron | MYC | 8 | - | IGH | 14 | - |
| exon-exon | MYC | 8 | - | IGHV4-34 | 14 | - |
| exon-intron | MYC | 8 | - | IGH | 14 | + |
| exon-intron | MYC | 8 | - | IGH | 14 | - |
| intron-exon | IGH | 14 | - | IGHM | 14 | - |
| exon-intron | UBA6-AS1 | 4 | + | TMPRSS11F | | + |
| exon-intron | MYC | 8 | - | IGH | 14 | - |
| exon-intron | MYC | 8 | - | IGH | 14 | - |
| exon-intron | MYC | 8 | - | IGH | 14 | - |
| exon-intron | MYC | 8 | - | IGH | 14 | - |
| exon-exon | MYC | 8 | - | MIR4538 | 14 | - |
| exon-intron | MYC | 8 | - | IGH | 14 | - |
| exon-intron | MYC | 8 | - | IGH | 14 | - |
| exon-intron | MYC | 8 | - | IGH | 14 | - |
| exon-intron | MYC | 8 | - | IGH | 14 | - |
| exon-intron | MYC | 8 | - | IGH | 14 | - |
| exon-exon | MYC | 8 | - | IGHV3-53 | 14 | - |
| exon-intron | MYC | 8 | - | IGHJ3P | 14 | - |
| exon-intron | MYC | 8 | - | IGH | 14 | - |
| exon-exon | MBOAT1 | 6 | - | RPL37 | 5 | - |
| intron-exon | PTTG1IP | 21 | - | MRPL33 | 2 | + |
| exon-intron | GUSBP11 | 22 | - | PQBP1 | X | + |
| intron-exon | BCLAF1 | 6 | - | ADPGK | 15 | - |
| exon-exon | MRPS33 | 7 | + | RNA45SN1 | 21 | - |
| exon-exon | TAGLN | 11 | + | PCSK7 | 11 | - |
| exon-exon | DUSP27 | 1 | + | MALAT1 | 11 | + |
| exon-intron | COX7A1 | 19 | + | POSTN | 13 | - |
| exon-exon | DST | 6 | - | DST | 6 | + |
| exon-exon | PIGL | 17 | - | MZT2B | 2 | + |
| exon-exon | RPS7P10 | 13 | - | RPLP0 | 12 | + |
| exon-exon | SF3B6 | 2 | - | RPLP0 | 12 | - |
| exon-intron | RPL19 | 17 | + | PDLIM7 | 5 | - |
| intron-exon | MACF1 | 1 | + | CLASP1 | 2 | - |
| exon-exon | MYH7 | 14 | - | MYH6 | 14 | - |
| intron-exon | IKZF5 | 10 | + | ELN | 7 | + |
| exon-exon | EIF3D | 22 | + | TBX20 | 7 | + |
| exon-exon | RNA45SN3 | 21 | + | SH3BGRL3 | 1 | + |
| exon-exon | ACTC1 | 15 | - | NDUFA1 | X | + |
| exon-exon | PKM | 15 | - | PKM | 15 | + |
| intron-exon | LOC106099064 | 11 | + | TMEM185A | X | - |
| exon-intron | SLC4A1 | 17 | + | TCF7L1 | 2 | - |
| exon-exon | RPL8 | 8 | + | UBL4A | X | + |
| exon-exon | SLC25A35 | 17 | - | UBB | 17 | + |
| exon-exon | WDR44 | X | + | RAB13 | 1 | - |
| exon-exon | GAPDH | 12 | - | CEP350 | 1 | + |
| exon-exon | HSPB6 | 19 | - | NOP16 | 5 | - |
| exon-exon | FHL1 | X | - | SGCA | 17 | + |
| exon-exon | SKP1 | 5 | - | HSPB1 | 7 | + |
| exon-exon | TNNI3 | 19 | - | USF2 | 19 | + |
| exon-exon | HBB | 11 | - | LRRC2 | 3 | - |
| exon-exon | HBB | 11 | - | RNH1 | 11 | + |
| exon-exon | PARD3 | 10 | + | RETREG1 | 5 | + |
| exon-intron | IGHGP | 14 | - | IGH | 14 | - |
| exon-exon | PTGDS | 9 | + | MYL7 | 7 | - |
| exon-intron | NRDC | 1 | - | C3orf38 | 3 | - |
| exon-exon | NFE2L2 | 2 | + | NACA | 12 | + |
| exon-exon | ENO1 | 1 | + | PSMD4 | 1 | + |
| exon-exon | TOMM6 | 6 | + | GAPDH | 12 | + |
| exon-exon | IARS1 | 9 | - | TMEM165 | 4 | - |
| exon-exon | SFMBT2 | 10 | - | PLCXD1 | Y | + |
| exon-exon | FAUP1 | 18 | - | PLIN3 | 19 | - |
| exon-exon | TNK2 | 3 | - | RNF187 | 1 | + |
| exon-exon | C19orf25 | 19 | - | KLF2 | 19 | + |
| exon-exon | CD34 | 1 | + | CD34 | 1 | - |
| exon-exon | NAT9 | 17 | - | RPL10 | X | + |
| exon-exon | CLLU1 | 12 | + | LINC02397 | 12 | + |
| exon-exon | KMT2A | 11 | + | MAML2 | 11 | - |
| intron-exon | PTPRT | 20 | + | ILF3 | 19 | + |
| intron-exon | ABCA5 | 17 | - | WDR55 | 5 | + |
| exon-exon | PRDM10 | 11 | - | FABP1 | 2 | - |
| intron-exon | RRP12 | 10 | - | PIGR | 1 | - |
| exon-intron | MEPCE | 7 | + | POLDIP3 | 22 | - |
| exon-exon | RNA45SN2 | 21 | + | PALM2AKAP2 | 9 | + |
| exon-exon | UHRF1BP1 | 6 | + | ND2 | MT | + |
| exon-intron | CMTR1 | 6 | + | RNR2 | MT | + |
| intron-exon | ZNF790 | 19 | - | CHP1 | 15 | + |
| exon-exon | RNA45SN2 | 21 | + | POMT1 | 9 | + |
| exon-exon | RHBDL2 | 1 | - | NXN | 17 | - |
| exon-exon | HMCES | 3 | + | DLGAP4 | 20 | + |
| exon-exon | TSPAN13 | 7 | + | PAK1IP1 | 6 | + |
| exon-exon | UEVLD | 11 | - | LYZ | 12 | + |
| exon-intron | GATAD2A | 19 | + | PRDM2 | 1 | + |
| exon-intron | SLC30A6 | 2 | + | RASSF3 | 12 | + |
| intron-exon | COL4A1 | 13 | - | SMIM4 | 3 | + |
| exon-exon | TMEM38B | 9 | + | VAPA | 18 | + |
| exon-intron | RUFY2 | 10 | - | LRRFIP1 | 2 | + |
| intron-exon | MIR100HG | 11 | - | DSC3 | 18 | - |
| exon-exon | KPNA4 | 3 | - | ANO10 | 3 | - |
| exon-exon | CCDC88A | 2 | - | RPL37A | 2 | + |
| exon-intron | TMEM143 | 19 | - | AC068533.3 | 7 | + |
| exon-intron | SVIL | 10 | - | LINC02613 | 2 | + |
| exon-exon | NCL | 2 | - | ARIH2 | 3 | + |
| exon-exon | RNU6-2 | 19 | + | NGLY1 | 3 | - |
| exon-intron | ZNF711 | X | + | CREB5 | 7 | + |
| intron-exon | LOC101927978 | 16 | + | HMGN3 | 6 | - |
| intron-exon | LRTOMT | 11 | - | RBMS1 | 2 | - |
| exon-exon | SPOPL | | + | LRRC2 | 3 | - |
| intron-exon | ZNF804A | 2 | + | GLRX3 | 10 | + |
| exon-exon | FBXW8 | 12 | + | ADGB | 6 | + |
| intron-exon | LOC107985174 | 1 | + | RPL23P6 | 6 | - |
| intron-exon | SEL1L | 14 | - | NEK4 | 3 | - |
| intron-exon | DNAJC15 | 13 | + | DES | 2 | + |
| intron-exon | TSPAN9 | 12 | + | ACTR10 | 14 | + |
| exon-exon | RPL7P9 | 1 | - | CLMN | 14 | - |
| exon-intron | BAHD1 | 15 | + | RMDN3 | 15 | + |
| exon-exon | HSPA13 | 21 | - | CCDC88C | 14 | - |
| exon-exon | INO80D | 2 | - | NAV1 | 1 | + |
| exon-exon | ANKRD40 | 17 | - | ELP2 | 18 | + |
| exon-exon | DARS2 | 1 | + | C20orf27 | 20 | - |
| exon-exon | PNMA2 | 8 | - | KIAA0319L | 1 | - |
| intron-exon | LOC107986859 | 7 | + | LOC728743 | 7 | + |
| exon-exon | ZNF451 | 6 | + | ZNF69 | 19 | + |
| exon-exon | MAN1A2 | 1 | + | USF3 | 3 | - |
| exon-exon | PPM1H | 12 | - | PPM1H | 12 | + |
| exon-exon | CTTNBP2NL | 1 | + | RPL41 | 12 | + |
| intron-exon | LOC112267872 | 19 | - | SLAIN2 | 4 | + |
| exon-exon | NFIA | 1 | + | GNPAT | 1 | + |
| exon-exon | GALNT14 | 2 | - | LAMTOR2 | 1 | + |
| exon-intron | PHAX | | + | CELA3B | 1 | - |
| exon-intron | ANKHD1-EIF4EBP3 | 5 | + | PCDHA10 | | + |
| exon-exon | RBM38 | 20 | + | CTBP2 | 10 | - |
| exon-intron | HELB | 12 | + | LOC101929331 | | + |
| exon-exon | KIAA1191 | 5 | - | CHP1 | 15 | + |
| exon-intron | ANKRD36B | 2 | - | AC159540.2 | 2 | - |
| intron-exon | STON2 | 14 | - | TNS1 | 2 | - |
| exon-intron | LOC102724850 | | + | LOC101927369 | | + |
| exon-exon | KLF11 | 2 | + | DCP2 | 5 | + |
| exon-exon | LRATD1 | 2 | - | LRATD1 | 2 | + |
| exon-intron | TUG1 | 22 | - | ACOX1 | 17 | - |
| intron-exon | MED13L | 12 | - | ND1 | MT | + |
| intron-exon | NR5A2 | | + | ND4 | MT | + |
| exon-exon | EVC | 4 | + | HLA-E | 6 | + |
| exon-exon | PHF6 | X | + | STX12 | 1 | + |
| exon-exon | MAPK1IP1L | 14 | + | FCF1 | 14 | + |
| exon-intron | PEX3 | | + | RNR2 | MT | + |
| exon-exon | DESI2 | 1 | + | DNAJC16 | | - |
| exon-exon | TTBK1 | | + | CREB3L2 | 7 | - |
| intron-exon | ZC3HC1 | 7 | - | HMGCS1 | 5 | - |
| intron-exon | PUM2 | 2 | - | VPS35 | 16 | - |
| exon-exon | ANKRD11 | 16 | - | HABP4 | 9 | + |
| exon-exon | RAB42 | 1 | + | EHD2 | 19 | + |
| exon-exon | CDCP1 | 3 | - | KPNB1 | 17 | + |
| exon-exon | PCNX3 | 11 | + | SF3A1 | 22 | - |
| exon-exon | NHS | X | + | MYL6 | 12 | + |
| exon-intron | NEAT1 | 11 | + | AC244205.1 | 2 | - |
| exon-exon | SCAMP5 | 15 | + | KLF4 | 9 | - |
| intron-exon | PFKFB2 | 1 | - | PIGR | 1 | - |
| exon-exon | DDX24 | 14 | - | NDRG1 | 8 | - |
| exon-exon | ZSWIM1 | 20 | + | DGAT1 | 8 | - |
| exon-intron | COX1 | MT | + | RNR2 | MT | + |
| exon-exon | MACO1 | 1 | + | FAM122B | X | - |
| exon-intron | LOC105377217 | | - | FAM224B | | - |
| exon-exon | LOC646762 | 7 | - | LOC646762 | 7 | + |
| intron-exon | LBX1-AS1 | 10 | + | RBFOX2 | 22 | - |
| intron-exon | ZEB2 | 2 | - | JCHAIN | 4 | - |
| exon-intron | FAM86DP | | - | ALG1L6P | 3 | - |
| intron-exon | LPP | 3 | + | CD58 | 1 | - |
| exon-exon | DISP2 | 15 | + | TMED10 | 14 | - |
| exon-exon | ATMIN | 16 | + | PDIA6 | 2 | - |
| exon-exon | USP48 | 1 | - | ATP8 | MT | + |
| exon-exon | RNU1-1 | 1 | - | PLAGL2 | 20 | - |
| intron-exon | RNU6-13P | | + | UBR2 | 6 | + |
| exon-exon | PGPEP1 | 19 | + | FKBP8 | 19 | - |
| exon-intron | RNF125 | | + | C6orf132 | 6 | - |
| exon-intron | DUOXA1 | 15 | - | RPS6 | 9 | - |
| intron-exon | MRPS22 | 3 | + | CMPK1 | 1 | + |
| intron-exon | APP | 21 | - | RAB11FIP1 | 8 | - |
| exon-exon | CYTB | MT | + | RSPO3 | 6 | + |
| exon-exon | PNPT1 | 2 | - | RPS15A | 16 | - |
| exon-exon | FTSJ3 | 17 | - | COX2 | MT | + |
| exon-exon | ZNF587 | 19 | + | UBE2CP5 | 19 | + |
| exon-exon | MPDU1 | 17 | + | SOX15 | 17 | + |
| intron-exon | LOC106799848 | 14 | + | ATG9B | 7 | - |
| exon-intron | SOCS2 | 12 | - | SOCS2-AS1 | 12 | - |
| intron-exon | RTN1 | 14 | - | DPYSL2 | 8 | + |
| intron-exon | WDR27 | 6 | - | SLC25A6 | X | - |
| exon-exon | LTO1 | 11 | - | FTH1 | 11 | - |
| exon-exon | OLFML2A | 9 | + | PXN | 12 | - |
| exon-intron | SNHG7 | 9 | - | DIPK1B | 9 | - |
| exon-exon | GABBR1 | 6 | - | SV2B | 15 | + |
| intron-exon | LARGE1 | 22 | - | TMEM189-UBE2V1 | 20 | - |
| intron-exon | LOC107983998 | 19 | + | COX2 | MT | + |
| exon-intron | NYAP2 | | + | LOC105373914 | | + |
| exon-exon | UTP23 | 8 | + | LOC112268030 | 8 | + |
| exon-intron | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | ZNF446 | 19 | + | DOT1L | 19 | + |
| exon-exon | EEF1AKMT1 | | - | IL17D | 13 | - |
| intron-exon | TAS1R1 | 1 | - | CLIP3 | 19 | - |
| intron-exon | NKTR | 3 | + | RPL35A | 3 | + |
| intron-exon | ROCK1 | | - | ND6 | MT | + |
| exon-exon | UCK2 | 1 | + | FAM78B-AS1 | 1 | + |
| exon-exon | DZIP1 | 13 | - | PKP4 | 2 | + |
| exon-exon | SMC5 | 9 | + | ND3 | MT | + |
| exon-intron | C11orf54 | 11 | + | TAF1D | 11 | + |
| intron-exon | GALNT18 | 11 | - | ND4 | MT | + |
| exon-intron | TNFSF4 | 1 | - | NUTM2A-AS1 | 10 | - |
| exon-intron | LOC100505549 | 18 | + | LOC105372141 | | + |
| exon-exon | DDX50 | 10 | + | WASF1 | 6 | - |
| exon-exon | CINP | | - | ZNF839 | | - |
| exon-exon | SYNE1 | 6 | - | ND6 | MT | + |
| exon-intron | LOC102723517 | 17 | - | LOC108021842 | | - |
| exon-exon | COPS8 | 2 | - | LOC105373950 | | - |
| exon-exon | ROBO3 | 11 | + | ND4 | MT | + |
| intron-exon | TRIM55 | 8 | + | PSMG3 | 7 | - |
| exon-intron | STX6 | 1 | - | KIAA1614 | 1 | - |
| exon-exon | PLPPR4 | 1 | + | REPIN1 | 7 | + |
| intron-exon | ENSA | 1 | + | CELA2A | | + |
| exon-exon | FCHO2 | 5 | + | CSH1 | 17 | - |
| intron-exon | HBP1 | 7 | - | ND4 | MT | + |
| exon-exon | HMBOX1 | 8 | + | ATP6 | MT | + |
| exon-intron | C9orf85 | 9 | + | COX3 | MT | + |
| intron-exon | GPBP1 | 5 | + | REXO5 | 16 | + |
| exon-intron | LOC112268206 | | + | LOC147004 | | + |
| intron-exon | LINC00692 | 3 | - | OTOA | 16 | + |
| exon-exon | FATE1 | X | + | TMEM131 | 2 | - |
| exon-exon | ARHGEF25 | 12 | + | SLC26A10 | | + |
| exon-intron | STK31 | | + | LOC105375188 | | + |
| intron-exon | LOC105371954 | 18 | - | LINC00470 | 18 | - |
| exon-intron | LOC107984867 | 16 | + | RP11-410D17.2 | | + |
| intron-exon | LOC727978 | 3 | - | APBB1 | 11 | - |
| exon-intron | RGS8 | | - | SDHAP3 | | - |
| exon-exon | CPLX2 | 5 | + | RAB6B | 3 | - |
| exon-exon | NIPA1 | 15 | + | SMPD1 | 11 | + |
| exon-exon | SNX27 | 1 | + | SNCB | 5 | - |
| exon-exon | MGAT5B | 17 | + | ZNF358 | 19 | + |
| exon-exon | APOLD1 | 12 | + | EEF1A1 | 6 | - |
| intron-exon | GPSM1 | 9 | + | TMEM94 | 17 | + |
| exon-intron | GLTPD2 | | - | AC233723.2 | | - |
| exon-intron | LOC100507351 | | + | RP11-13K12.5 | | + |
| intron-exon | KIF25-AS1 | 6 | - | LMNA | 1 | + |
| intron-exon | TSKU | 11 | + | C1orf116 | 1 | - |
| exon-exon | IGHG1 | 14 | - | IGLV3-19 | 22 | + |
| exon-exon | LINC00221 | 14 | + | LOC112268139 | | + |
| exon-exon | RN7SK | 6 | + | C10orf126 | 10 | + |
| exon-exon | SEC24B-AS1 | | - | RBMXP4 | | - |
| intron-exon | ATP8B4 | 15 | - | LOC105370733 | 15 | + |
| exon-intron | CCDC62 | 12 | + | AP003774.5 | 11 | + |
| exon-intron | AMOTL1 | 11 | + | AP002383.2 | | + |
| exon-exon | TTC14 | 3 | + | PTER | 10 | + |
| exon-exon | LRCH4 | 7 | - | SAP25 | | - |
| exon-exon | ERAP2 | 5 | + | POR | 7 | + |
| intron-exon | CHD4 | 12 | - | ISM1 | 20 | + |
| exon-exon | NOC4L | 12 | + | RAB3GAP2 | 1 | - |
| intron-exon | ZNF133 | 20 | + | BMPR2 | 2 | + |
| exon-exon | RNA45SN2 | 21 | + | GPR34 | X | + |
| exon-intron | PNISR | 6 | - | FAXC | 6 | - |
| exon-exon | SPG11 | 15 | - | ISLR | 15 | + |
| exon-exon | OLFML2A | 9 | + | PDLIM7 | 5 | - |
| exon-exon | PLXNA2 | 1 | - | TMEM50A | 1 | + |
| exon-exon | MIER1 | 1 | + | WLS | 1 | - |
| exon-exon | UBE2J2 | 1 | - | RPL38 | 17 | + |
| exon-exon | GMPR2 | 14 | + | STOML2 | 9 | - |
| exon-exon | IER5L | 9 | - | MGAT2 | 14 | + |
| exon-exon | GOLGA2 | 9 | - | FOXA2 | 20 | - |
| exon-exon | RNVU1-7 | 1 | - | PSG1 | 19 | - |
| exon-exon | LAMB4 | 7 | - | COBLL1 | 2 | - |
| exon-exon | EMSY | 11 | + | SLC30A9 | 4 | + |
| intron-exon | SMURF2P1 | 17 | + | LRRC37BP1 | 17 | + |
| exon-exon | DYNC1I2 | 2 | + | ND1 | MT | + |
| exon-intron | SAMD4B | 19 | + | KIAA1841 | 2 | + |
| exon-exon | RNA45SN1 | 21 | + | GALNT7 | 4 | + |
| exon-intron | C9orf131 | 9 | - | AL353795.3 | | - |
| exon-intron | TMEM259 | 19 | - | GRIN3B | | - |
| intron-exon | PPARD | 6 | - | ARHGEF1 | 19 | + |
| exon-exon | RALGDS | 9 | + | RALGDS | 9 | - |
| exon-intron | IGHJ6 | 14 | - | IGHD | 14 | - |
| exon-exon | CCDC58 | 3 | - | ENO1 | 1 | - |
| intron-exon | PIKFYVE | | + | ATP6 | MT | + |
| exon-exon | BTBD9 | 6 | - | VSNL1 | 2 | + |
| exon-intron | LINC00693 | | - | LOC107986012 | | - |
| exon-exon | YLPM1 | 14 | + | EPHB6 | 7 | + |
| exon-exon | TSHZ1 | 18 | + | BGN | X | + |
| exon-exon | INTS8 | 8 | + | TALDO1 | 11 | + |
| exon-exon | KIAA2026 | 9 | - | PRDX1 | 1 | - |
| exon-exon | C2CD3 | 11 | - | SOX4 | 6 | + |
| exon-exon | SFT2D2 | 1 | + | TBX19 | 1 | + |
| exon-intron | CELSR2 | 1 | + | PVR | 19 | + |
| intron-exon | NOCT | 4 | - | MMS19 | 10 | - |
| intron-exon | SHMT1 | 17 | - | MLLT11 | 1 | - |
| intron-exon | TEX10 | 9 | - | WSB1 | 17 | + |
| exon-exon | KLF8 | X | + | FERMT2 | 14 | - |
| exon-exon | ANKRD52 | 12 | - | RPL13AP5 | 10 | + |
| exon-exon | LOC101926887 | 10 | - | LIPA | 10 | - |
| exon-intron | TAF1L | 9 | + | AL589642.1 | | + |
| exon-exon | DAAM2 | 6 | + | CCDC80 | 3 | - |
| exon-intron | ZBTB44 | 11 | + | ZBTB44-DT | 11 | + |
| intron-exon | MVB12B | 9 | - | FKBP8 | 19 | - |
| intron-exon | AC073343.2 | | + | PMS2CL | | + |
| exon-exon | HOXD8 | | - | LOC100129455 | | - |
| exon-exon | LOC105376060 | 9 | - | CBWD6 | 9 | - |
| exon-exon | NR2F1-AS1 | 5 | - | USP11 | X | + |
| exon-exon | EMX1 | 2 | + | TARS2 | 1 | + |
| exon-exon | C9orf152 | 9 | - | MYH11 | 16 | - |
| intron-exon | ZNF391 | 6 | + | RPL35A | 3 | + |
| exon-exon | CKAP5 | 11 | - | STATH | 4 | + |
| exon-exon | NHSL1 | 6 | - | FTL | 19 | + |
| intron-exon | ZNF420 | 19 | + | RPLP2 | 11 | + |
| exon-intron | TRIM56 | 7 | + | SNRNP70 | 19 | + |
| intron-exon | SMTN | 22 | + | AMT | 3 | - |
| intron-exon | MIR8061 | 19 | + | UBC | 12 | - |
| exon-exon | NEURL4 | | - | GPS2 | 17 | - |
| exon-exon | ANKRD26 | 10 | - | NBR1 | 17 | + |
| intron-exon | LOC105371191 | 16 | - | DUSP22 | 6 | + |
| exon-intron | LOC100289333 | 19 | + | LOC107984139 | 19 | + |
| intron-exon | LOC497256 | 9 | + | SPATA31E1 | 9 | + |
| exon-intron | LOC107983961 | | + | CASC22 | | + |
| exon-intron | LOC285847 | | - | FKBP5 | 6 | - |
| exon-exon | ZNF596 | 8 | + | DDX21 | 10 | + |
| intron-exon | MYH9 | 22 | - | PITHD1 | 1 | + |
| intron-exon | ASCC2 | 22 | - | LAMTOR3 | 4 | - |
| intron-exon | TAMM41 | 3 | - | RAB1B | 11 | + |
| exon-exon | CA13 | | + | CA3 | 8 | + |
| exon-exon | DTX3L | 3 | + | HLA-DRB5 | 6 | - |
| exon-exon | RNF213 | 17 | + | SIT1 | 9 | - |
| exon-exon | INTS1 | 7 | - | SQSTM1 | 5 | + |
| exon-intron | SP3 | 2 | - | AFTPH | 2 | + |
| exon-exon | ENTPD3-AS1 | 3 | - | SOD2 | 6 | - |
| intron-exon | SRGAP1 | 12 | + | LEFTY2 | 1 | - |
| intron-exon | ITPR1 | 3 | + | ATP8 | MT | + |
| intron-exon | NUDCD1 | 8 | - | ATP6 | MT | + |
| exon-exon | SYTL4 | | - | DHCR24 | 1 | - |
| exon-exon | AP1AR | 4 | + | SRSF7 | 2 | - |
| exon-intron | CCDC183 | 9 | + | RABL6 | 9 | + |
| exon-exon | DCAF5 | 14 | - | COX3 | MT | + |
| intron-exon | VPS36 | 13 | - | PAIP2B | 2 | - |
| exon-intron | MAF | 16 | - | WWOX | 16 | - |
| exon-exon | LOC105370982 | 15 | + | LOC107983974 | 15 | + |
| exon-exon | SYT2 | 1 | - | PPFIA4 | 1 | + |
| intron-exon | SEPTIN11 | 4 | + | SYT11 | 1 | + |
| intron-exon | CCDC175 | 14 | - | TNFRSF25 | 1 | - |
| intron-exon | LOC107986064 | | + | GALNT15 | | + |
| intron-exon | INVS | 9 | + | ATP6 | MT | + |
| exon-intron | LINC00683 | 18 | + | LINC01927 | | + |
| exon-exon | LOC497256 | 9 | - | LOC112267903 | | - |
| exon-exon | ZNF708 | 19 | - | CYP46A1 | 14 | + |
| intron-exon | TENT2 | 5 | + | CD24 | 6 | - |
| exon-intron | THEM5 | | - | C2CD4D-AS1 | 1 | - |
| exon-intron | RAB28P5 | | - | AL683813.1 | | - |
| intron-exon | LTBP2 | 14 | - | PLCB2 | 15 | - |
| exon-exon | TSPAN3 | 15 | - | FLRT2 | 14 | + |
| intron-exon | NOL4L | 20 | + | PDCL | 9 | - |
| exon-exon | EPHB2 | 1 | + | TMEM60 | 7 | - |
| exon-exon | YLPM1 | 14 | + | RPL6 | 12 | - |
| exon-exon | PYGO2 | 1 | - | FTH1 | 11 | - |
| exon-exon | IFTAP | 11 | + | LOC107984325 | 11 | + |
| intron-exon | HACD3 | | + | ATP6 | MT | + |
| exon-intron | LOC107985075 | | + | ALOX12B | | + |
| exon-exon | BMPER | 7 | + | COX3 | MT | + |
| exon-exon | NBEAL1 | 2 | + | CARF | 2 | + |
| exon-intron | FAM66C | | + | DEFB109F | | + |
| exon-intron | EPCAM-DT | 2 | - | MSH2 | 2 | - |
| exon-exon | NAPB | 20 | - | ZNHIT3 | 17 | + |
| intron-exon | NSG1 | 4 | + | GPS2 | 17 | - |
| intron-exon | SLC36A4 | 11 | - | CSH1 | 17 | - |
| exon-intron | LOC729451 | | - | SAMD4A | 14 | - |
| exon-exon | RBP5 | 12 | - | C1RL-AS1 | 12 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-intron | SDHAF1 | 19 | + | TP53 | 17 | - |
| intron-exon | TRN-GTT23-1 | | - | LINC01138 | 1 | - |
| intron-exon | GBF1 | 10 | + | HDHD3 | 9 | - |
| exon-exon | SIRPB2 | 20 | - | HSPA1A | 6 | + |
| exon-exon | RPS17 | 15 | - | LOC107987347 | Y | - |
| intron-exon | EP400 | 12 | + | LMO4 | 1 | + |
| intron-exon | TMEM176A | 7 | - | TMEM176B | 7 | - |
| exon-intron | CYP3A5 | 7 | - | ND4 | MT | + |
| exon-intron | CD37 | 19 | - | SLC6A16 | 19 | - |
| exon-intron | SPEM1 | 17 | + | AC113189.2 | | + |
| intron-exon | TMEM132D | 12 | + | TMEM132D-AS1 | 12 | + |
| intron-exon | LOC112533671 | | + | TSEN54 | 17 | + |
| exon-exon | SNHG11 | 20 | + | PARP10 | 8 | - |
| exon-intron | LOC101930593 | | + | SYT5 | | + |
| exon-intron | HLA-K | 6 | - | HCG4B | 6 | - |
| exon-intron | ACP2 | 11 | - | IDO2 | 8 | - |
| exon-exon | HSF5 | 17 | - | TRAPPC4 | 11 | + |
| intron-exon | FAM182A | 20 | + | LOC100134868 | 20 | + |
| intron-exon | RP11-80H5.9 | 10 | - | NBAS | 2 | - |
| intron-exon | SNHG27 | 4 | + | NISCH | 3 | + |
| exon-intron | SUN5 | | - | LOC110121484 | | - |
| intron-exon | AC005697.2 | 17 | + | LYRM9 | 17 | + |
| exon-exon | BCOR | X | - | POM121L12 | 7 | + |
| exon-intron | TRBJ2-6 | | + | TRB | 7 | + |
| intron-exon | CAMK4 | 5 | + | RPS4X | X | - |
| exon-exon | SNRK | | + | COX2 | MT | + |
| intron-exon | PRKCA | 17 | + | LYZ | 12 | + |
| exon-exon | CADPS2 | 7 | - | ARMCX6 | X | - |
| exon-exon | KLHL3 | 5 | - | MAPKBP1 | 15 | + |
| intron-exon | SMCO4 | 11 | - | BCL7B | 7 | - |
| exon-exon | PKM | 15 | + | FAIM2 | 12 | - |
| exon-exon | PAPLN | 14 | + | NDRG2 | 14 | - |
| exon-exon | VWA7 | 6 | - | PPP1R13B | 14 | - |
| exon-exon | CDC42BPA | 1 | - | CAMK2A | 5 | - |
| exon-intron | RNA45SN2 | 21 | + | SOS2 | 14 | - |
| exon-exon | RALGPS2 | 1 | + | RGMB | | + |
| exon-exon | CTNNB1 | 3 | + | BOLA2-SMG1P6 | 16 | - |
| exon-intron | ANKRD52 | 12 | - | CALD1 | 7 | + |
| intron-exon | PACS1 | 11 | + | RPL12 | 9 | - |
| intron-exon | AL354707.1 | 9 | + | KDM4C | 9 | + |
| exon-intron | KLHDC1 | 14 | + | BMPR1A | 10 | + |
| intron-exon | SFXN5 | 2 | - | MIAT | 22 | + |
| exon-exon | GUCD1 | 22 | - | ATP6 | MT | + |
| exon-exon | PIEZO2 | 18 | - | ALG12 | 22 | - |
| intron-exon | HSPG2 | 1 | - | KDM4C | 9 | + |
| intron-exon | SNW1 | 14 | + | C14orf178 | 14 | + |
| exon-exon | SLC36A2 | 5 | - | RPL24 | 3 | - |
| exon-intron | HCAR1 | | - | RP11-324E6.6 | 12 | - |
| intron-exon | TMEM165 | 4 | + | RRM1 | 11 | + |
| exon-exon | MICAL3 | 22 | - | JPT2 | 16 | + |
| intron-exon | ADGRB3 | 6 | + | ALOXE3 | 17 | - |
| exon-exon | LTB4R2 | | - | CIDEB | 14 | - |
| exon-exon | ZNF587B | 19 | + | ZNF587 | 19 | + |
| intron-exon | LOC105379185 | 5 | - | VDAC1P2 | X | - |
| intron-exon | KDM6A | X | + | STOML3 | 13 | - |
| intron-exon | AC096577.1 | | - | SPAG7 | 17 | - |
| exon-exon | SYNE1 | 6 | - | KIFC2 | 8 | + |
| exon-intron | LNCTAM34A | 1 | - | PRKG1-AS1 | 10 | + |
| intron-exon | FOXO3 | 6 | + | FOXN3 | 14 | - |
| intron-exon | ZSWIM5 | 1 | - | GALNT13 | 2 | + |
| intron-exon | JAZF1 | 7 | - | SRSF6 | 20 | + |
| exon-exon | MCRS1 | 12 | - | CFL1 | 11 | - |
| exon-intron | ZNF483 | 9 | + | RNR2 | MT | + |
| intron-exon | LOC100506974 | | - | LOC107985014 | | - |
| exon-exon | DMXL2 | 15 | - | ND1 | MT | + |
| intron-exon | LMNA | 1 | + | GAP43 | 3 | + |
| exon-intron | MICU3 | 8 | + | AC079193.2 | | + |
| intron-exon | AL500527.2 | | - | PKM | 15 | - |
| intron-exon | PHYKPL | 5 | - | STMN1 | 1 | - |
| intron-exon | DENND5B | 12 | - | BCL7B | 7 | - |
| exon-exon | ENTPD7 | 10 | + | LPCAT1 | 5 | - |
| exon-intron | IGHJ2 | 14 | - | IGHA1 | 14 | - |
| exon-exon | HUWE1 | X | - | PIGT | 20 | + |
| intron-exon | HAND2 | 4 | + | HAND2-AS1 | 4 | + |
| intron-exon | LOC102724050 | 12 | + | AZI2 | 3 | - |
| exon-exon | LOC105373102 | Y | + | U2AF1L5 | 21 | - |
| intron-exon | PLEKHM1P1 | 17 | - | KIAA1671 | 22 | + |
| exon-exon | TMED4 | 7 | - | ENG | 9 | - |
| exon-exon | IER5L | 9 | + | LOC105376289 | 9 | + |
| exon-intron | ZNF23 | | + | ZNF19 | 16 | + |
| intron-exon | AL121772.1 | 20 | - | LOC105372579 | 20 | - |
| exon-intron | LOC107985352 | 1 | + | AC099066.2 | 1 | + |
| intron-exon | AC092155.1 | 2 | - | TMEM17 | 2 | - |
| intron-exon | AC139795.2 | 5 | + | LOC202181 | 5 | + |
| exon-intron | LSM11 | | + | TDRKH | | - |
| intron-exon | MFAP3L | 4 | + | MTR | 1 | + |
| intron-exon | MACF1 | 1 | + | NEAT1 | 11 | + |
| intron-exon | SAMD12 | 8 | - | PPP2CA | 5 | - |
| exon-exon | SENP5 | | + | NCBP2 | 3 | - |
| exon-exon | PRPF18 | 10 | + | ATP6 | MT | + |
| intron-exon | SPRED2 | | - | ND1 | MT | + |
| exon-intron | ZNF497 | | - | A1BG | 19 | - |
| exon-exon | CCDC144B | | - | USP32P3 | 17 | + |
| intron-exon | LINC01637 | | - | CRKL | 22 | - |
| intron-exon | LINC01870 | 2 | - | RFX8 | 2 | - |
| intron-exon | N4BP2L2 | 13 | - | MBP | 18 | - |
| exon-intron | POU3F3 | 2 | + | SATB2 | 2 | + |
| exon-exon | DDX42 | 17 | + | CADM3 | 1 | + |
| exon-exon | TMCO6 | 5 | + | ZNF800 | 7 | - |
| exon-exon | LOC105370401 | 14 | - | ATXN7 | 3 | + |
| exon-intron | CTTN | 11 | - | PPFIA1 | 11 | - |
| intron-exon | NLRC3 | 16 | + | LOC101929732 | 16 | + |
| intron-exon | COTL1 | 16 | - | RBM7 | 11 | + |
| exon-intron | GPRC5D-AS1 | 12 | + | AC023790.2 | | + |
| exon-intron | LOC100505851 | | - | ZNF726 | | - |
| exon-exon | CARMIL1 | 6 | + | TINCR | 19 | - |
| exon-exon | LOC105369147 | | - | BAALC-AS1 | | - |
| exon-intron | CTBP1-DT | | + | LOC105374347 | | + |
| exon-exon | AGPAT3 | 21 | + | ATP1A4 | 1 | + |
| exon-intron | NBPF18P | 1 | + | S100A11 | 1 | + |
| intron-exon | LPAL2 | | - | SLC22A3 | 6 | - |
| exon-intron | LRRC37A8P | | - | AC015849.5 | | - |
| intron-exon | ATG10 | 5 | + | RPS23 | 5 | + |
| intron-exon | TBC1D3P3 | | + | KDM5C | X | - |
| intron-exon | MGMT | 10 | + | ACLY | 17 | - |
| exon-exon | REC114 | | + | FAM114A1 | | + |
| intron-exon | SMPD4 | 2 | - | MTCH1 | 6 | - |
| exon-intron | APOC4 | 19 | + | APOC2 | 19 | + |
| intron-exon | PVT1 | 8 | + | ANXA2 | 15 | - |
| exon-exon | COPE | 19 | - | PLXNB1 | 3 | - |
| intron-exon | ZNF521 | 18 | - | RPL6 | 12 | - |
| exon-intron | NSD1 | 5 | + | AL935212.3 | | - |
| intron-exon | CDYL2 | 16 | - | INS-IGF2 | 11 | - |
| intron-exon | EHMT1 | 9 | + | NBPF9 | 1 | - |
| exon-intron | ZNF887P | | + | ZNF833P | | + |
| exon-exon | LOC400553 | | - | LOC105369246 | | - |
| exon-exon | ICE1 | 5 | + | PAFAH1B3 | 19 | - |
| intron-exon | UNC13C | 15 | + | NMNAT2 | 1 | - |
| intron-exon | AC120498.9 | | - | LOC102723815 | | - |
| exon-exon | FMN1 | 15 | - | ATP5F1B | 12 | - |
| exon-exon | USP54 | 10 | - | PKD1L1 | 7 | - |
| intron-exon | SLC16A3 | 17 | + | FTH1 | 11 | - |
| exon-exon | UNC13A | 19 | - | WBP2 | 17 | - |
| exon-exon | ZNF655 | 7 | + | NUDCD3 | 7 | - |
| intron-exon | DNAI2 | | + | ECHDC2 | 1 | - |
| intron-exon | ADPGK-AS1 | 15 | + | EIF4G2 | 11 | - |
| exon-exon | EMC10 | 19 | - | ADARB2 | 10 | - |
| intron-exon | ATP6V0C | 16 | + | SMCR8 | 17 | + |
| intron-exon | MACF1 | 1 | + | COX1 | MT | + |
| intron-exon | MAP1B | 5 | + | ISG20L2 | 1 | - |
| exon-exon | LOC105378230 | 5 | + | DUSP1 | 5 | - |
| exon-exon | FLNA | X | - | WTAP | 6 | + |
| exon-exon | JADE1 | 4 | + | RAB12 | 18 | + |
| exon-exon | UBBP4 | 17 | + | SUPT20H | 13 | - |
| exon-exon | ANKRD26 | 10 | - | FAM238C | | - |
| intron-exon | MATN1 | 1 | + | MATN1-AS1 | 1 | + |
| exon-intron | LOC101060187 | | - | AC011477.7 | | - |
| exon-exon | ABCB8 | 7 | + | ASIC3 | 7 | + |
| exon-intron | RNF224 | | - | CYSRT1 | | - |
| exon-exon | DUSP8P5 | 10 | + | KASH5 | 19 | + |
| exon-exon | LOC105369468 | | - | CARD17 | | - |
| intron-exon | SLC38A10 | 17 | - | HAGHL | 16 | + |
| exon-exon | PRSS44P | 3 | - | PRSS43P | 3 | - |
| exon-intron | DNAH2 | 17 | + | LOC105371516 | | + |
| exon-intron | IGHV3-64D | 14 | - | IGHA1 | 14 | - |
| exon-exon | FRYL | 4 | - | PRH1-PRR4 | 12 | - |
| exon-intron | IGHJ3 | 14 | - | IGHA1 | 14 | - |
| exon-exon | PKHD1L1 | 8 | + | MACF1 | 1 | + |
| intron-exon | PVT1 | 8 | + | COL6A1 | 21 | + |
| exon-exon | JAK1 | 1 | - | PKP4 | 2 | + |
| intron-exon | MSS51 | 10 | - | LAS1L | X | - |
| intron-exon | ZEB2 | 2 | - | PAFAH2 | 1 | - |
| intron-exon | CRLS1 | 20 | + | MNS1 | 15 | - |
| intron-exon | STS | X | + | NEFH | 22 | + |
| intron-exon | CSNK1G3 | 5 | + | HTN3 | 4 | + |
| exon-intron | PIK3R5 | 17 | - | ITCH | 20 | + |
| exon-exon | GOLGA2 | 9 | - | RPS8 | 1 | + |
| intron-exon | ASTN1 | | - | DR1 | 1 | - |
| exon-exon | PDPK1 | 16 | + | VPS28 | 8 | - |
| intron-exon | DST | 6 | - | ND4 | MT | + |
| exon-exon | TTN | 2 | - | FUNDC2 | X | + |
| exon-exon | TTN | 2 | - | GOT2 | 16 | - |
| exon-exon | TTN | 2 | - | HRC | 19 | - |
| intron-exon | LOC105378211 | 5 | - | ATP5F1C | 10 | + |
| exon-exon | RASSF3 | 12 | + | SOS2 | 14 | - |
| exon-exon | RNF213 | 17 | + | RALBP1 | 18 | + |
| intron-exon | CHD1 | 5 | - | RPSAP54 | 13 | + |
| intron-exon | GTDC1 | 2 | - | PRDX1 | 1 | - |
| intron-exon | PTPRG | 3 | + | ND2 | MT | + |
| exon-exon | ZNF320 | 19 | - | TMEM192 | 4 | - |
| exon-exon | SLC12A1 | 15 | + | COX3 | MT | + |
| exon-exon | BSND | | + | RNA45SN2 | 21 | + |
| exon-exon | KIAA0100 | 17 | - | TRAPPC3 | 1 | - |
| exon-exon | APOE | 19 | + | HMGA1 | 6 | + |
| intron-exon | NSUN2 | 5 | - | ND4 | MT | + |
| exon-intron | AFF1-AS1 | 4 | - | C4orf36 | 4 | - |
| exon-exon | C5orf24 | 5 | + | LIMA1 | 12 | - |
| exon-exon | DOCK5 | 8 | + | PPP2R2A | 8 | + |
| exon-exon | SLC35C1 | | + | LOC105747689 | | + |
| intron-exon | ENOX2 | X | - | TXN2 | 22 | - |
| intron-exon | IFT74 | | + | GTDC1 | 2 | - |
| intron-exon | AL034417.2 | | + | ND4 | MT | + |
| intron-exon | EXT1 | 8 | - | FAM177A1 | 14 | + |
| exon-exon | FBXL18 | 7 | - | TTLL3 | 3 | + |
| intron-exon | RAB18 | 10 | + | ND4 | MT | + |
| intron-exon | CGNL1 | 15 | + | HTN3 | 4 | + |
| exon-exon | FAM200B | 4 | + | HTN3 | 4 | + |
| intron-exon | AC243919.2 | | + | GOLGA6L5P | | - |
| intron-exon | THOC1 | 18 | - | SRP19 | 5 | + |
| intron-exon | FLJ31356 | 2 | + | ASAH2B | | + |
| intron-exon | NR1I3 | 1 | + | FBLIM1 | 1 | + |
| intron-exon | PDS5A | 4 | - | ATP5F1B | 12 | - |
| exon-exon | TRPC4AP | 20 | - | LMF2 | 22 | - |
| exon-intron | POLL | 10 | + | DPCD | 10 | + |
| exon-exon | CRYBG3 | 3 | + | MYLK | 3 | - |
| intron-exon | LINC01788 | 1 | - | MARK3 | 14 | + |
| exon-intron | GRWD1 | 19 | + | KCNJ14 | 19 | + |
| exon-exon | LOC101927533 | 2 | + | LOC105369168 | | + |
| intron-exon | FTX | X | - | TSIX | X | - |
| exon-exon | AP4M1 | 7 | + | AGAP3 | 7 | + |
| intron-exon | ZNF814 | 19 | + | UBE2CP5 | 19 | + |
| intron-exon | AL021918.5 | 6 | - | ZNF184 | 6 | - |
| exon-exon | ANKS1B | 12 | - | CRY1 | 12 | - |
| exon-exon | LOC100133315 | 11 | - | ATP6 | MT | + |
| exon-exon | NFXL1 | 4 | - | RACK1 | 5 | - |
| exon-intron | LOC441666 | 10 | - | LOC101929373 | 10 | - |
| intron-exon | STX18-AS1 | 4 | + | ZNF705A | 12 | + |
| exon-exon | ZNF385B | 2 | - | FTL | 19 | + |
| exon-exon | RNA45SN2 | 21 | + | WDR88 | 19 | + |
| intron-exon | POLR3F | 20 | - | DZANK1 | 20 | - |
| exon-exon | LINC01786 | 1 | + | SCNN1D | 1 | + |
| exon-exon | ANK3 | 10 | - | RPS3 | 11 | + |
| exon-intron | LNX2 | 13 | - | LINC02340 | 13 | - |
| exon-intron | GPAM | 10 | - | TRND | MT | + |
| exon-exon | ANKH | 5 | - | TSPAN3 | 15 | - |
| exon-intron | ND6 | MT | + | HECTD1 | 14 | - |
| exon-intron | NDUFS5 | 1 | + | RPL10P16 | 19 | - |
| exon-exon | C3 | 19 | - | GALNT6 | 12 | - |
| exon-exon | UTP11 | 1 | + | TRAPPC4 | 11 | + |
| exon-exon | AGPS | 2 | + | ND1 | MT | + |
| exon-exon | TRMT61B | 2 | - | ND1 | MT | + |
| exon-exon | ALOX5 | 10 | + | PRSS1 | 7 | + |
| exon-exon | PVRIG | 7 | + | PSMA2 | 7 | - |
| exon-intron | UBQLN3 | 11 | - | ZEB2 | 2 | + |
| exon-exon | ND4 | MT | + | HDHD2 | 18 | - |
| intron-exon | KCNQ1 | 11 | + | UCP2 | 11 | - |
| exon-exon | C1QTNF6 | 22 | + | C1QTNF6 | 22 | - |
| exon-intron | EXOSC3 | | - | TRMT10B | 9 | - |
| intron-exon | SOX2-OT | 3 | + | TMIE | 3 | + |
| intron-exon | AL353748.3 | 9 | + | SPIN1 | 9 | + |
| exon-exon | STARD3NL | 7 | + | TENT4A | 5 | + |
| exon-exon | FBXL4 | 6 | - | PROX1 | 1 | + |
| exon-exon | TMTC3 | 12 | + | RPL4 | 15 | - |
| exon-exon | EDNRB | 13 | - | SFTPB | 2 | - |
| exon-exon | LOC101927572 | 19 | + | RAN | 12 | + |
| exon-exon | COL4A5 | X | + | PLS3 | X | + |
| exon-exon | DTD1 | 20 | + | LOC107985399 | | + |
| intron-exon | TRG | 7 | - | TRGV8 | | - |
| exon-exon | HCN3 | 1 | - | CLK2 | 1 | - |
| exon-exon | DMTF1 | 7 | + | C2orf27A | 2 | + |
| exon-exon | CCDC90B | 11 | - | PRADC1 | | - |
| exon-exon | PFAS | 17 | + | RNF141 | 11 | - |
| exon-intron | MRPL18 | 6 | + | C5orf34 | 5 | - |
| exon-exon | JUP | 17 | - | KRT19 | 17 | - |
| exon-exon | HNRNPM | 19 | + | ND1 | MT | + |
| exon-exon | ZNF525 | 19 | + | ZNF765-ZNF761 | 19 | + |
| exon-exon | TMEM199 | 17 | + | SARM1 | 17 | + |
| exon-intron | CCDC130 | 19 | + | CLCN2 | 3 | - |
| exon-exon | GBGT1 | | - | RALGDS | 9 | - |
| exon-exon | TELO2 | 16 | + | SMYD5 | 2 | + |
| exon-exon | TMEM161B | | - | VCAN | 5 | + |
| exon-intron | CDKL3 | 5 | - | PPP2CA | 5 | - |
| exon-intron | FAM66D | | + | LOC100506990 | 8 | + |
| intron-exon | NXF3 | X | - | GOLGA8A | 15 | - |
| intron-exon | AC108693.2 | 3 | + | ATP6V1A | 3 | + |
| exon-intron | C9orf129 | 9 | - | ACTN1 | 14 | - |
| intron-exon | SEC22B4P | 1 | + | TP53TG5 | 20 | - |
| exon-exon | USP40 | 2 | - | TUBG2 | 17 | + |
| exon-exon | ATP8A1 | 4 | - | RASGEF1B | 4 | - |
| intron-exon | AC023137.1 | 2 | + | NBPF10 | 1 | - |
| exon-exon | DNAAF4 | 15 | - | CCPG1 | 15 | - |
| exon-exon | RAMP1 | 2 | + | GANAB | 11 | - |
| exon-exon | CHAT | | + | C10orf53 | | + |
| exon-exon | RNF5 | 6 | + | AGER | 6 | + |
| exon-intron | DPCD | 10 | + | POLL | 10 | + |
| exon-exon | ZNRD2 | 11 | + | LYPLA1 | 8 | - |
| intron-exon | LOC111875822 | 10 | + | CFAP58 | 10 | + |
| exon-exon | MOB2 | 11 | - | HSPB7 | 1 | - |
| exon-exon | MUC12 | 7 | + | LGALS4 | 19 | - |
| intron-exon | LOC101926967 | 17 | - | ATXN7L3 | 17 | - |
| exon-exon | GRAP | 17 | - | ZNF574 | 19 | + |
| intron-exon | EFCAB14 | 1 | - | ATPAF1 | 1 | - |
| exon-intron | MMP24OS | | - | EDEM2 | | - |
| exon-exon | RPA2 | 1 | - | JPT2 | 16 | + |
| intron-exon | OTOP2 | 17 | - | USH1G | 17 | - |
| exon-exon | PRR13 | 12 | + | PCBP2 | 12 | + |
| exon-exon | CATSPER2P1 | 15 | - | STRC | 15 | - |
| exon-exon | EPHB3 | 3 | + | JADE1 | 4 | + |
| exon-exon | PLPPR4 | 1 | + | SENP2 | 3 | + |
| exon-exon | PTPRD | 9 | - | RBM39 | 20 | - |
| exon-exon | LIX1L | 1 | - | KIF1A | 2 | - |
| exon-exon | GNL3 | 3 | + | PI4KA | 22 | - |
| exon-exon | PTN | 7 | + | TPM3 | 1 | - |
| exon-exon | PPIL3 | 2 | - | CLK1 | 2 | - |
| intron-exon | DNAJB6P1 | 11 | - | APOL3 | 22 | - |
| exon-intron | TAPBP | 6 | - | ACTN4 | 19 | + |
| intron-exon | PCAT19 | 19 | - | DMAC2 | | - |
| exon-exon | PHKB | 16 | + | SIAH1 | 16 | - |
| exon-exon | TMEM11 | 17 | - | ENO1 | 1 | - |
| exon-exon | ARSG | 17 | + | GK | X | + |
| exon-exon | TAGAP | 6 | - | CCSER2 | 10 | + |
| exon-intron | IRF1 | | - | IRF1-AS1 | 5 | - |
| intron-exon | AC125494.1 | 12 | + | ZNF384 | 12 | + |
| intron-exon | MTMR8 | | - | ASB12 | | - |
| intron-exon | SV2C | 5 | - | TMEM231 | 16 | - |
| intron-exon | C3 | 19 | - | CAPN2 | 1 | + |
| exon-exon | HACL1 | 3 | - | COLQ | 3 | - |
| exon-exon | GAA | | + | GAA | 17 | - |
| exon-exon | NAP1L4 | 11 | - | MAP1B | 5 | + |
| exon-exon | CTU2 | 16 | + | PRKAR2A | 3 | - |
| exon-exon | RAET1E | 6 | - | LRP11 | 6 | - |
| exon-exon | NEUROD6 | 7 | - | CAPN1 | 11 | + |
| exon-exon | LOC107986022 | 3 | - | LSAMP | 3 | - |
| exon-exon | COL4A2 | 13 | + | STK24 | 13 | - |
| exon-intron | HSD17B1 | | + | AC067852.1 | | + |
| exon-exon | NTAN1 | | - | LRRC26 | 9 | - |
| exon-exon | TNNC2 | 20 | - | RNA45SN1 | 21 | + |
| exon-exon | TRIM54 | | + | MLF2 | 12 | - |
| exon-intron | MILR1 | 17 | + | CFDP1 | 16 | - |
| exon-exon | CRIM1 | 2 | + | VDAC2 | 10 | + |
| exon-exon | NFKBIL1 | | + | LOC100287329 | | + |
| exon-intron | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| intron-exon | IGH | 14 | - | IGHA1 | 14 | - |
| exon-intron | CKLF | 16 | + | CMTM1 | 16 | + |
| exon-exon | SP140 | 2 | + | SP140L | 2 | + |
| exon-exon | PGA3 | 11 | + | PGA4 | 11 | + |
| intron-exon | AC027612.2 | | - | DRD5P1 | | - |
| exon-intron | IGHJ6 | 14 | - | IGHG1 | 14 | - |
| exon-exon | RPS9 | 19 | + | EHD2 | 19 | + |
| exon-exon | RHCG | 15 | - | LOC105370964 | | - |
| exon-exon | XPNPEP3 | 22 | + | RBX1 | | + |
| exon-intron | RRM1 | 11 | + | LINC02749 | | + |
| exon-exon | NOL4 | 18 | - | MTFR1L | 1 | + |
| exon-exon | PHC3 | 3 | - | SPACA3 | 17 | + |
| exon-exon | TM9SF4 | 20 | + | NKTR | 3 | + |
| exon-exon | PFKFB3 | 10 | + | MOV10 | 1 | + |
| exon-exon | ODF2L | | - | LOC105378825 | | - |
| exon-intron | MLH1 | | + | LRRFIP2 | 3 | + |
| intron-exon | IMPDH1P9 | 6 | + | RNF144B | 6 | + |
| exon-exon | MRPS16 | 10 | - | DNAJC9 | 10 | - |
| exon-exon | LAPTM5 | 1 | - | AFAP1L1 | 5 | + |
| exon-exon | ZNF512 | 2 | + | GPN1 | 2 | + |
| exon-intron | MDM4 | 1 | + | LOC105371692 | | + |
| exon-exon | RNA45SN1 | 21 | + | KDM6A | X | + |
| exon-exon | RBMS3 | | + | RFTN1 | | - |
| intron-exon | FHOD1 | 16 | - | DDX11L2 | 2 | - |
| exon-exon | RNA45SN1 | 21 | + | POLR2A | 17 | + |
| intron-exon | NSMAF | 8 | - | UQCRH | 1 | + |
| exon-intron | KCNK4-TEX40 | 11 | + | LOC107984494 | | - |
| exon-intron | NAT8 | 2 | + | ALMS1P1 | 2 | + |
| intron-exon | LOC107985862 | 2 | - | SRD5A2 | 2 | - |
| exon-exon | LOC107987119 | | - | FKBP15 | 9 | - |
| exon-intron | POLRMT | 19 | - | FRMPD1 | 9 | - |
| exon-exon | PER3 | 1 | + | AKAP11 | 13 | + |
| exon-exon | TMEM244 | 6 | - | ARHGAP18 | 6 | - |
| exon-exon | ZNF789 | 7 | + | ATP5MF-PTCD1 | 7 | - |
| exon-exon | USP5 | 12 | + | SLTM | 15 | - |
| exon-exon | ZFYVE26 | 14 | - | MFSD2A | 1 | + |
| exon-exon | PHRF1 | 11 | + | HCFC1R1 | 16 | - |
| exon-exon | LRRC37A3 | 17 | - | MIR124-1HG | | - |
| exon-intron | PSMG1 | | - | LOC107985484 | | - |
| exon-exon | BRWD1 | 21 | - | PSMG1 | | - |
| exon-intron | MERTK | 2 | + | AC093675.1 | | + |
| exon-exon | TMEM59L | 19 | + | SYNGR1 | 22 | + |
| exon-exon | ROBO2 | 3 | + | VPS8 | 3 | + |
| exon-intron | TRIM22 | 11 | + | TRIM5 | 11 | + |
| exon-intron | WDR19 | 4 | + | NEURL1B | | + |
| exon-intron | TRMT61B | 2 | - | SPDYA | 2 | - |
| exon-exon | CYP17A1-AS1 | 10 | + | CYP17A1 | 10 | + |
| exon-exon | PMS2P1 | 7 | - | TBX18 | 6 | - |
| exon-intron | PHACTR3 | 20 | + | SYCP2 | 20 | - |
| exon-exon | SLC6A7 | | + | CAMK2A | 5 | + |
| exon-exon | ACACA | 17 | - | ADCY7 | 16 | - |
| exon-intron | MCRS1 | 12 | - | MKNK1 | 1 | - |
| intron-exon | AL158151.1 | 9 | + | LOC105376289 | 9 | + |
| exon-exon | COQ10B | 2 | + | KIF3A | 5 | - |
| intron-exon | MTG1 | | + | PDXK | 21 | + |
| exon-exon | NCR1 | 19 | + | FBH1 | 10 | + |
| exon-exon | LOC102724289 | 3 | + | LANCL1 | 2 | - |
| exon-exon | TSPOAP1 | 17 | - | ASIC1 | 12 | + |
| exon-exon | PIGR | 1 | - | ATP5F1B | 12 | - |
| exon-exon | TMEM218 | 11 | - | STRADA | 17 | - |
| exon-exon | SHOX2 | | - | RAI14 | 5 | + |
| exon-intron | ACTN4 | 19 | + | LOC107985291 | 19 | - |
| exon-exon | TIGD7 | 16 | - | ATP6 | MT | + |
| exon-exon | GAK | 4 | - | BPTF | 17 | + |
| exon-exon | CPT1A | 11 | - | BLOC1S1-RDH5 | 12 | + |
| exon-exon | ACKR1 | 1 | + | EMP1 | 12 | + |
| exon-exon | PGC | 6 | - | SFTPA1 | 10 | + |
| exon-exon | CFAP52 | 17 | + | RALGAPA2 | 20 | - |
| exon-exon | HNRNPM | 19 | + | ND4 | MT | + |
| exon-intron | LOC107985996 | 2 | + | LOC107985995 | | + |
| exon-exon | CDC26P1 | 7 | - | YME1L1 | 10 | - |
| exon-intron | ITGAV | 2 | + | LOC105373785 | | + |
| intron-exon | TANC2 | 17 | - | TPM4 | 19 | + |
| exon-exon | MRPL51 | 12 | - | SPTLC1 | 9 | - |
| exon-exon | TNS1 | 2 | - | RPLP0 | 12 | - |
| exon-exon | ADGRL3 | | + | RAB5IF | 20 | + |
| exon-intron | DHTKD1 | | + | RP11-6J21.2 | | - |
| exon-intron | KIF24 | 9 | - | UBAP1 | 9 | - |
| exon-exon | NDUFAF1 | | - | RPP14 | 3 | + |
| exon-intron | TRAV8-4 | 14 | + | TRA | 14 | + |
| exon-exon | DPY19L2 | | - | CHD2 | 15 | + |
| exon-exon | MEF2D | 1 | - | LRPAP1 | 4 | - |
| intron-exon | RDH13 | 19 | - | GP6 | | - |
| exon-exon | LINC02272 | 4 | - | FAP | 2 | - |
| exon-exon | TPTEP2 | 22 | - | CSNK1E | 22 | - |
| exon-exon | SPATA31C1 | | + | METTL6 | | - |
| exon-exon | LOC105378898 | 1 | + | CYMP | 1 | + |
| exon-intron | DRICH1 | 22 | - | SRSF3 | 6 | + |
| exon-exon | CDH5 | 16 | + | TUBB4B | 9 | + |
| exon-exon | NPL | | + | DHX9 | 1 | + |
| intron-exon | RADIL | | - | NPIPB3 | 16 | - |
| exon-exon | RNF217 | 6 | + | MRPS27 | 5 | - |
| exon-exon | ZFHX2 | | - | SPATA16 | | - |
| exon-exon | PPIP5K2 | | + | PLK1 | 16 | + |
| exon-exon | HASPIN | | + | BCL7A | 12 | - |
| intron-exon | PGGHG | 11 | + | ARSA | 22 | - |
| exon-exon | USP45 | 6 | - | THOC1 | 18 | - |
| exon-exon | HNRNPM | 19 | + | DENND1A | 9 | - |
| exon-exon | RAG1 | 11 | + | SP3 | 2 | - |
| exon-exon | ALKBH6 | 19 | - | SYNE4 | | - |
| exon-intron | ATP7A | | + | RCSD1 | 1 | + |
| exon-exon | ELF3-AS1 | 1 | + | ELF3 | 1 | + |
| exon-exon | NOS2 | 17 | - | TTC37 | 5 | - |
| intron-exon | LOC105378642 | 1 | + | ACOX1 | 17 | - |
| exon-exon | HNRNPA0 | 5 | - | CDIPT | 16 | - |
| exon-exon | ZBTB39 | | - | RDH16 | 12 | - |
| exon-exon | COL18A1 | | + | CCNG2 | 4 | + |
| exon-exon | ZBED4 | 22 | + | DCTN1 | 2 | - |
| exon-intron | ATP1A1 | 1 | + | SRGAP2 | 1 | + |
| intron-exon | AL442067.3 | 13 | + | RAP2A | 13 | + |
| intron-exon | MT1X | 16 | + | DPPA2P4 | 16 | + |
| exon-exon | LTV1 | 6 | + | ZC2HC1B | 6 | + |
| intron-exon | LINGO2 | 9 | + | LOC646700 | 9 | + |
| exon-exon | HSPA1A | 6 | - | HSPA1L | 6 | - |
| intron-exon | LOC107985558 | | - | MIF-AS1 | | - |
| intron-exon | TTC6 | 14 | - | FOXA1 | 14 | - |
| intron-exon | KIF24 | 9 | - | ZNF121 | 19 | - |
| exon-exon | MPPED2-AS1 | 11 | + | MAP1S | 19 | + |
| exon-exon | VAMP2 | 17 | + | TLE3 | 15 | - |
| exon-intron | MYL6 | 12 | + | ZNF331 | 19 | - |
| exon-exon | ZNF326 | 1 | + | PTMAP2 | 5 | + |
| exon-exon | DNAH3 | 16 | + | DNAH3 | 16 | - |
| exon-exon | MS4A6E | 11 | + | MS4A14 | 11 | + |
| exon-exon | ATP6V0E2 | 7 | - | ATP6V0E2-AS1 | 7 | - |
| exon-intron | LOC100507387 | 5 | - | AC139491.7 | 5 | - |
| exon-exon | ATP6 | MT | + | ATP6 | MT | - |
| exon-intron | PTMA | 2 | - | TJP1P1 | 16 | + |
| exon-exon | MAST2 | 1 | - | MAST2 | 1 | + |
| exon-intron | LINC01579 | 15 | - | LINC02207 | 15 | - |
| exon-exon | KCTD9 | 8 | + | KCTD9 | 8 | - |
| exon-exon | ALS2 | 2 | + | ALS2 | 2 | - |
| exon-exon | PLD3 | 19 | - | PLD3 | 19 | + |
| exon-exon | ARF1 | 1 | - | ARF1 | 1 | + |
| exon-intron | ZMYND15 | 17 | - | ZMYND15 | 17 | + |
| intron-exon | LINC00558 | 13 | - | LINC00558 | 13 | + |
| exon-exon | SLC2A3 | 12 | - | SLC2A3 | 12 | + |
| exon-exon | LOC107985314 | 19 | + | VASP | 19 | + |
| exon-exon | SDK1 | 7 | - | SDK1 | 7 | + |
| intron-exon | LOC102723759 | 3 | + | SERBP1 | 1 | + |
| exon-exon | RNA45SN1 | 21 | + | FAM71E1 | 19 | - |
| exon-exon | LINC02043 | 3 | - | RFC4 | 3 | - |
| exon-exon | KANSL1 | 17 | - | KANSL1 | 17 | + |
| intron-exon | RP1-74B13.2 | 12 | + | CCDC63 | 12 | + |
| exon-exon | SENP1 | 12 | + | SENP1 | 12 | - |
| intron-exon | PSPC1P2 | 13 | + | TPTE2P6 | 13 | + |
| intron-exon | AC084734.1 | 8 | - | LOC105375937 | 8 | - |
| exon-intron | NFYB | 12 | + | DNAH1 | 3 | - |
| exon-exon | SMAD4 | 18 | - | SMAD4 | 18 | + |
| exon-exon | ZNF175 | 19 | - | ZNF175 | 19 | + |
| exon-exon | ZCCHC14 | 16 | + | ZCCHC14 | 16 | - |
| exon-exon | LENG9 | 19 | - | LENG8 | 19 | - |
| intron-exon | TSPAN16 | 19 | + | EP300 | 22 | - |
| exon-intron | CDK2AP1 | 12 | - | C12orf65 | 12 | - |
| exon-exon | WASHC2A | 10 | - | WASHC2C | 10 | + |
| exon-exon | SASS6 | 1 | + | SASS6 | 1 | - |
| exon-exon | HSP90AB1 | 6 | - | HSP90AB1 | 6 | + |
| exon-intron | AMD1 | 6 | - | UXS1 | 2 | - |
| intron-exon | AP005209.1 | 18 | - | LOC105371985 | 18 | - |
| exon-exon | SEL1L | 14 | + | SEL1L | 14 | - |
| exon-exon | FREM1 | 9 | + | FREM1 | 9 | - |
| exon-exon | PPP6R2 | 22 | - | PPP6R2 | 22 | + |
| exon-intron | UVSSA | 4 | + | EVL | 14 | - |
| exon-exon | UHRF1BP1 | 6 | - | UHRF1BP1 | 6 | + |
| exon-exon | TRIM74 | 7 | - | NSUN5P2 | 7 | - |
| intron-exon | FAM118A | 22 | + | ESPL1 | 12 | + |
| exon-exon | RNA45SN3 | 21 | + | CHFR | 12 | - |
| exon-exon | GLTP | 12 | - | LOC105369975 | 12 | - |
| intron-exon | LOC105369225 | 17 | + | LRRC37A4P | 17 | - |
| intron-exon | FAM230E | 22 | + | LOC102725072 | 22 | + |
| intron-exon | CD1B | 1 | + | HSP90AA3P | 1 | + |
| exon-exon | LRPAP1 | 4 | - | HNRNPM | 19 | + |
| exon-exon | RBBP6 | 16 | - | CANX | 5 | + |
| exon-exon | RNA45SN2 | 21 | + | NACA | 12 | - |
| exon-exon | ACTB | 7 | + | ACTB | 7 | - |
| exon-intron | RPL3 | 22 | + | RPL3P4 | 14 | - |
| exon-exon | RAPGEF6 | 5 | + | RAPGEF6 | 5 | - |
| exon-exon | IGLV2-23 | 22 | + | IGLL5 | 22 | + |
| exon-exon | KHDC4 | 1 | + | KHDC4 | 1 | - |
| exon-exon | EGFLAM | 5 | - | EGFLAM | 5 | + |
| exon-exon | LPAR6 | 13 | - | MICAL1 | 6 | - |
| exon-exon | HMGCS1 | 5 | + | HMGCS1 | 5 | - |
| exon-exon | ATP8B3 | 19 | - | TFAM | 10 | + |
| intron-exon | AL160270.1 | 9 | - | ENHO | 9 | - |
| exon-exon | RNA45SN2 | 21 | + | LAMC3 | 9 | + |
| exon-exon | AP1G1 | 16 | - | CA12 | 15 | - |
| exon-exon | GABARAP | 17 | + | GABARAP | 17 | - |
| exon-exon | PPP2R2A | 8 | - | PPP2R2A | 8 | + |
| exon-exon | PIH1D2 | 11 | - | DLAT | 11 | + |
| exon-exon | CALU | 7 | - | TIMD4 | 5 | - |
| exon-exon | TCF3 | 19 | + | TCF3 | 19 | - |
| exon-exon | DEGS1 | 1 | - | DEGS1 | 1 | + |
| exon-exon | PRM1 | 16 | - | PLOD1 | 1 | + |
| exon-exon | VBP1 | X | - | VBP1 | X | + |
| exon-intron | HCP5 | 6 | + | AF131217.1 | 21 | - |
| exon-intron | FAM205BP | | - | AL162231.2 | 9 | - |
| exon-exon | RALA | 7 | + | TRIM58 | 1 | + |
| exon-exon | GIT1 | 17 | - | MAGI1 | 3 | - |
| exon-intron | ACTR2 | 2 | + | LOC101927533 | 2 | + |
| exon-intron | CGGBP1 | 3 | - | PSMD12 | 17 | + |
| intron-exon | AP003031.1 | | - | DGAT2 | 11 | - |
| exon-exon | MYRF-AS1 | | - | DAGLA | 11 | - |
| intron-exon | RAPGEF2 | 4 | + | IREB2 | 15 | + |
| exon-intron | RALGDS | 9 | - | TIAM2 | 6 | + |
| exon-exon | KAT2B | 3 | - | ACLY | 17 | - |
| intron-exon | AGTPBP1 | 9 | - | RAVER1 | 19 | - |
| exon-exon | NOL7 | 6 | + | RANBP9 | 6 | - |
| exon-intron | SMARCA1 | X | - | AL008633.1 | X | - |
| exon-intron | PRMT2 | 21 | + | AF131217.1 | 21 | - |
| exon-exon | RNA45SN2 | 21 | + | C7orf50 | 7 | - |
| exon-exon | DCAF7 | 17 | + | DCAF7 | 17 | - |
| exon-exon | RC3H2 | 9 | + | NDRG3 | 20 | - |
| exon-exon | NEDD4L | 18 | - | NEDD4L | 18 | + |
| exon-exon | DCT | 13 | + | DCT | 13 | - |
| intron-exon | CARNMT1-AS1 | 9 | + | EPAS1 | 2 | + |
| exon-intron | GPI | 19 | + | ENG | 9 | - |
| exon-exon | DCAF4L1 | 4 | + | LOC100268168 | 5 | - |
| exon-exon | TRAPPC11 | 4 | - | TRAPPC11 | 4 | + |
| exon-exon | KDM4B | 19 | - | KDM4B | 19 | + |
| intron-exon | LOC101927952 | 1 | - | SPAG11A | 8 | + |
| exon-exon | NTRK3 | 15 | + | NTRK3 | 15 | - |
| exon-exon | C1GALT1 | 7 | - | C1GALT1 | 7 | + |
| exon-exon | KLC1 | 14 | + | ZBED8 | 5 | - |
| exon-intron | EXOSC5 | 19 | + | LHFPL3 | 7 | - |
| intron-exon | LIX1L-AS1 | 1 | + | WARS1 | 14 | - |
| exon-exon | ACTN1 | 14 | + | ACTN1 | 14 | - |
| exon-exon | ZRANB1 | 10 | - | ZRANB1 | 10 | + |
| intron-exon | GK4P | X | + | GK | X | + |
| exon-exon | NDUFA13 | 19 | + | YJEFN3 | 19 | + |
| intron-exon | CGGBP1 | 3 | - | ZNF654 | 3 | + |
| exon-exon | TAF9B | X | - | TAF9B | X | + |
| exon-exon | ETFA | 15 | - | SCO1 | 17 | - |
| exon-exon | USP10 | 16 | - | USP10 | 16 | + |
| exon-exon | NPM1 | 5 | + | DICER1 | 14 | - |
| intron-exon | IMMP2L | 7 | - | LOC100996294 | 17 | - |
| intron-exon | LINC01117 | 2 | - | LOC101929963 | | - |
| exon-intron | CFAP69 | 7 | + | AC002064.1 | 7 | + |
| exon-exon | TPTE2P2 | 13 | - | MRPS31P5 | 13 | - |
| intron-exon | SMDT1 | | + | NSUN2 | 5 | - |
| intron-exon | PARP15 | | + | RDX | 11 | - |
| intron-exon | LIN37 | | - | PSENEN | 19 | - |
| exon-exon | RNGTT | 6 | + | RNGTT | 6 | - |
| intron-exon | PTPRT | 20 | - | ZCCHC8 | 12 | - |
| intron-exon | CRYZL1 | 21 | - | DONSON | 21 | - |
| exon-exon | MBOAT2 | 2 | - | MBOAT2 | 2 | + |
| exon-exon | PLXNA1 | 3 | + | SHANK1 | 19 | - |
| exon-exon | ARIH2 | 3 | - | ARIH2 | 3 | + |
| exon-intron | USP22 | 17 | - | PRIM1 | 12 | - |
| exon-intron | LOC101929007 | 19 | + | LOC105372323 | | + |
| exon-exon | COL12A1 | 6 | + | COL12A1 | 6 | - |
| exon-exon | SLC8A3 | 14 | + | MEIS3 | 19 | - |
| exon-exon | NACC2 | | + | SAP18 | 13 | + |
| intron-exon | TMEM222 | 1 | + | FAM219B | 15 | - |
| exon-exon | LASP1 | 17 | + | TINCR | 19 | - |
| exon-exon | SYS1 | 20 | - | RPL10A | 6 | + |
| exon-exon | PREX1 | 20 | + | LOC105372648 | 20 | + |
| exon-intron | SLC2A10 | 20 | + | MSI2 | 17 | - |
| intron-exon | MIR4530 | 19 | - | PAF1 | 19 | - |
| exon-exon | PLPPR3 | 19 | - | PTBP1 | 19 | - |
| intron-exon | NAA35 | 9 | + | GOLM1 | 9 | + |
| intron-exon | RP11-114G22.1 | 12 | + | LOC101928441 | 12 | + |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| exon-exon | EIF2AK1 | 7 | - | AIMP2 | 7 | - |
| exon-exon | NCOA4 | 10 | - | TIMM23 | 10 | - |
| exon-exon | LRBA | 4 | + | MAB21L2 | 4 | + |
| intron-exon | SOCS2-AS1 | 12 | + | SOCS2 | 12 | + |
| exon-exon | CCR10 | 17 | + | CNTNAP1 | 17 | + |
| intron-exon | GBA | 1 | - | GBAP1 | 1 | - |
| intron-exon | LOC105371050 | 16 | - | CCNF | 16 | - |
| exon-intron | LOC105377663 | 4 | + | CEP135 | 4 | + |
| exon-intron | DOC2A | 16 | - | INO80E | 16 | - |
| exon-intron | VPS33B-DT | 15 | + | LOC390638 | 15 | + |
| exon-exon | RAB11FIP2 | 10 | + | CASC2 | 10 | + |
| exon-exon | HNRNPL | 19 | - | EMC8 | 16 | - |
| exon-exon | TLE5 | 19 | + | CREB3L3 | 19 | + |
| exon-exon | FBXO16 | 8 | - | ZNF395 | 8 | - |
| exon-exon | IGFBP7 | 4 | + | IGFBP7-AS1 | 4 | + |
| exon-intron | LUC7L | 16 | + | LOC102723930 | 16 | + |
| intron-exon | HSH2D | 19 | - | RAB8A | 19 | - |
| intron-exon | PHYKPL | 5 | - | HNRNPAB | 5 | - |
| exon-exon | SMARCD3 | 7 | + | LRP11 | 6 | - |
| intron-exon | RNF31 | 14 | - | PSME2 | 14 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CD63 | 12 | + | LOC105369779 | 12 | + |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| intron-exon | MMP24-AS1-EDEM2 | 20 | + | PROCR | 20 | + |
| intron-exon | PARGP1 | 10 | - | AGAP4 | 10 | - |
| exon-exon | MGME1 | 20 | - | SNX5 | 20 | - |
| exon-intron | LOC105370000 | 12 | + | AC026765.2 | 12 | + |
| exon-exon | EPHA1 | 7 | - | ZYX | 7 | - |
| exon-exon | ZNF512 | 2 | + | GPN1 | 2 | + |
| exon-exon | PSG6 | 19 | + | PSG4 | 19 | + |
| exon-intron | SLC20A1 | 2 | - | FLJ42351 | 2 | - |
| intron-exon | AC104793.1 | 4 | + | FSTL5 | 4 | + |
| intron-exon | RHOF | 12 | - | TMEM120B | 12 | - |
| exon-intron | PRKAR2A | 3 | - | SHISA5 | 3 | - |
| intron-exon | LOC107984343 | 11 | + | GAL | 11 | + |
| exon-exon | BORCS8 | 19 | - | MEF2B | 19 | - |
| exon-exon | EEF2KMT | 16 | - | ALG1 | 16 | - |
| exon-exon | MBD2 | 18 | - | KDELR2 | 7 | - |
| exon-exon | TBCB | 19 | + | EIF4EBP2 | 10 | + |
| exon-exon | PLTP | 20 | - | CTSA | 20 | - |
| exon-exon | SLA2 | 20 | - | RAB5IF | 20 | - |
| exon-exon | HSF4 | 16 | - | FBXL8 | 16 | - |
| exon-intron | RSL1D1 | 16 | + | LMNA | 1 | - |
| intron-exon | LOC112268118 | 13 | - | RB1 | 13 | - |
| exon-exon | LOC105370824 | 15 | - | ONECUT1 | 15 | - |
| exon-exon | PTGIR | 19 | - | CALM3 | 19 | - |
| exon-exon | LINC00444 | 13 | + | SUCLA2 | 13 | + |
| exon-exon | CHRM1 | 11 | + | LOC105369333 | 11 | + |
| intron-exon | LOC105369421 | 11 | - | HIKESHI | 11 | - |
| intron-exon | DDX27 | 20 | + | BYSL | 6 | - |
| exon-exon | CXorf65 | X | - | FOXO4 | X | - |
| exon-intron | HMGN2P15 | 17 | + | RAMP2-AS1 | 17 | + |
| exon-exon | LUZP6 | 7 | + | MTPN | 7 | + |
| exon-intron | PSG1 | 19 | + | PSG6 | 19 | + |
| exon-exon | LOC105372760 | 21 | + | ADAMTS5 | 21 | + |
| exon-exon | IGFBP7 | 4 | - | POLR2B | 4 | - |
| exon-exon | LOC107985263 | 1 | - | SMYD2 | 1 | - |
| exon-exon | EPHA1 | 7 | - | ZYX | 7 | - |
| exon-exon | MYCL-AS1 | 1 | + | MYCL | 1 | + |
| intron-exon | PHYKPL | 5 | - | HNRNPAB | 5 | - |
| exon-intron | TRBC1 | 7 | - | TRB | 7 | - |
| exon-exon | DOCK7 | 1 | - | USP1 | 1 | - |
| intron-exon | CGREF1 | 2 | - | KHK | 2 | - |
| exon-exon | COX3 | MT | - | ATP6 | MT | - |
| exon-intron | ZNF165 | 6 | - | ZSCAN16-AS1 | 6 | - |
| exon-intron | ND2 | MT | - | PRPF40B | 12 | + |
| exon-intron | MALAT1 | 11 | + | CTNND2 | 5 | - |
| exon-intron | SCAF11 | 12 | + | MLEC | 12 | + |
| intron-exon | UBXN2B | 8 | + | PAXIP1 | 7 | - |
| exon-exon | FOXP1 | 3 | - | PPP1CB | 2 | + |
| exon-exon | DHX33 | 17 | - | CNIH4 | 1 | + |
| exon-exon | DSP | 6 | - | DSP | 6 | + |
| exon-exon | MIF-AS1 | 22 | + | MIF | 22 | + |
| exon-exon | LOC107985875 | 2 | - | MTA3 | 2 | - |
| exon-intron | HSD17B10 | X | - | LIMS1 | 2 | + |
| exon-exon | PMS2P9 | 7 | + | CCDC146 | 7 | + |
| exon-exon | COL3A1 | 2 | + | AMOT | X | - |
| exon-intron | ND4L | MT | + | PLIN4 | 19 | - |
| intron-exon | MMS22L | 6 | + | LOC101927314 | 6 | + |
| exon-exon | RNA45SN1 | 21 | + | COX1 | MT | + |
| exon-exon | MALAT1 | 11 | + | ND4 | MT | + |
| intron-exon | PPP1R12A | 12 | - | PAWR | 12 | - |
| exon-intron | CXorf65 | X | - | VAV3 | 1 | + |
| exon-intron | ARID2 | 12 | + | SUPT20H | 13 | - |
| exon-intron | RNA45SN1 | 21 | + | OSBPL9 | 1 | + |
| intron-exon | TPST1 | 7 | + | NDUFV1 | 11 | + |
| exon-intron | RBPMS | 8 | + | SORL1 | 11 | - |
| exon-intron | RNA45SN1 | 21 | + | ZZZ3 | 1 | + |
| exon-intron | AGO3 | 1 | + | EPB41L5 | 2 | + |
| exon-exon | ND5 | MT | + | GDAP2 | 1 | - |
| exon-intron | LOC107986416 | 5 | - | LOC107986418 | 5 | - |
| exon-intron | OARD1 | 6 | - | APOBEC2 | 6 | - |
| exon-intron | ND4 | MT | + | ZNF280D | 15 | - |
| exon-exon | ZNF142 | 2 | + | ZNF142 | 2 | - |
| exon-exon | THUMPD3-AS1 | 3 | + | THUMPD3-AS1 | 3 | - |
| exon-exon | PDE4A | 19 | - | PDE4A | 19 | + |
| exon-intron | LOC107986195 | 4 | + | AC108156.1 | 4 | + |
| exon-intron | SNHG22 | 18 | + | MTMR4 | 17 | - |
| exon-intron | LOC105370733 | 15 | + | PWRN3 | 15 | + |
| intron-exon | LOC105371131 | 16 | - | FUT8 | 14 | + |
| intron-exon | AL139390.1 | 6 | + | LOC105374904 | 6 | + |
| exon-intron | LOC101928673 | 1 | - | TNFSF4 | 1 | - |
| exon-exon | SPRR1B | 1 | + | XIST | X | - |
| exon-exon | LOC105377171 | 3 | - | N4BP1 | 16 | - |
| exon-exon | PTTG1IP | 21 | - | NCOA6 | 20 | - |
| exon-exon | LOC105378768 | 1 | + | USP1 | 1 | + |
| exon-exon | NUTM2B-AS1 | 10 | - | BEND3P3 | 10 | - |
| exon-intron | ND5 | MT | + | SNED1-AS1 | 2 | - |
| exon-exon | NUCKS1 | 1 | + | NUCKS1 | 1 | - |
| exon-intron | MACC1 | 7 | - | LOC101927668 | 7 | - |
| intron-exon | ADAM12 | 10 | - | PPP2R1A | 19 | + |
| exon-intron | ZNF888 | 19 | - | ZNF320 | 19 | - |
| exon-exon | TMEM30A-DT | 6 | + | FILIP1 | 6 | + |
| exon-exon | NID1 | 1 | + | NID1 | 1 | - |
| exon-exon | TMEM41B | 11 | - | SSU72 | 1 | - |
| exon-intron | KNOP1 | 16 | - | CYP24A1 | 20 | - |
| exon-exon | SEC14L5 | 16 | + | NAGPA-AS1 | 16 | + |
| exon-intron | PCNX4 | 14 | + | LOC101928046 | 14 | + |
| intron-exon | ZNF722P | 7 | + | FRRS1L | 9 | - |
| exon-exon | NCOR1 | 17 | + | NCOR1 | 17 | - |
| exon-intron | FAM138E | 15 | + | FAM138E | 15 | - |
| exon-exon | ERBIN | 5 | - | FTL | 19 | + |
| exon-intron | PCCB | 3 | + | STAG1 | 3 | + |
| exon-intron | GPR137B | 1 | - | MFHAS1 | 8 | - |
| exon-exon | SFPQ | 1 | - | TRIP10 | | + |
| intron-exon | LINC01237 | | - | C2CD6 | | - |
| exon-intron | MYPN | | + | LGR5 | 12 | + |
| exon-exon | ARHGAP15 | 2 | + | MBNL1 | 3 | + |
| exon-intron | LOC340184 | | + | ADTRP | | + |
| exon-intron | ZNF48 | | + | ITGAL | | + |
| exon-intron | STK32B | | + | AL445242.1 | 13 | + |
| intron-exon | RNF224 | | + | SLC34A3 | | + |
| exon-exon | GFAP | 17 | + | N4BP2L2 | 13 | - |
| exon-intron | SUGP2 | 19 | - | AP000959.1 | 21 | + |
| exon-exon | LOC105378132 | | - | LINC02487 | | - |
| exon-intron | BCKDHA | 19 | + | DMAC2 | | + |
| exon-intron | RDH13 | 19 | - | LOC107985325 | 19 | - |
| intron-exon | LOC105371016 | | + | SYNM | 15 | + |
| exon-intron | BCLAF3 | X | - | TRAP1 | 16 | + |
| exon-intron | VPS13D | 1 | + | DLGAP2 | 8 | + |
| intron-exon | MACROD2 | 20 | + | LINC00226 | 14 | + |
| exon-exon | LENG8 | 19 | + | RTF1 | 15 | + |
| intron-exon | AC106872.12 | | + | FAM218BP | | + |
| intron-exon | ZHX1-C8orf76 | 8 | - | MYLK | 3 | - |
| exon-exon | SCML2 | X | + | SCML2 | X | - |
| exon-exon | ESPN | 1 | + | ATP6V1G2-DDX39B | 6 | - |
| intron-exon | FMNL3 | 12 | - | RNF44 | 5 | - |
| exon-exon | LRP10 | 14 | + | RAB13 | 1 | - |
| exon-intron | LOC339593 | 20 | - | AL049649.1 | 20 | - |
| intron-exon | AL049649.1 | 20 | + | LOC339593 | 20 | + |
| exon-intron | PRND | 20 | + | LARGE1 | 22 | - |
| intron-exon | KMT2A | 11 | + | KRBA2 | 17 | + |
| exon-intron | KMT2A | 11 | + | AFF1 | 4 | + |
| intron-exon | KMT2A | 11 | + | AFF1 | 4 | + |
| intron-exon | KMT2A | 11 | - | AFF1 | 4 | + |
| exon-intron | KMT2A | 11 | + | AFF1 | 4 | + |
| exon-intron | KMT2A | 11 | + | AFF1 | 4 | + |
| exon-intron | ETV6 | 12 | + | BAZ2A | 12 | + |
| exon-exon | IGHJ2 | 14 | - | IGHD | 14 | - |
| exon-intron | IGLV3-21 | 22 | + | IGL | 22 | + |
| exon-intron | IGLV3-6 | | + | IGL | 22 | + |
| exon-intron | IGLV3-10 | | + | IGL | 22 | + |
| intron-exon | MYC | 8 | - | IGHJ6 | 14 | - |
| intron-exon | MYC | 8 | - | IGHD2-2 | 14 | - |
| intron-exon | MYC | 8 | - | IGHD4-17 | 14 | - |
| intron-exon | MYC | 8 | - | IGHG2 | 14 | - |
| intron-exon | MYC | 8 | - | IGHJ5 | 14 | - |
| intron-exon | MYC | 8 | - | IGHJ6 | 14 | - |
| exon-exon | MYC | 8 | - | IGHD2-21 | 14 | - |
| exon-exon | BCR | 22 | + | ABL1 | 9 | + |
| exon-exon | BCR | 22 | + | ABL1 | 9 | + |
| exon-exon | BCR | 22 | + | ABL1 | 9 | + |
| exon-exon | BCR | 22 | + | ABL1 | 9 | + |
| exon-exon | TMEM223 | 11 | - | PDHA1 | X | + |
| exon-intron | KMT2A | 11 | + | AFF1 | 4 | + |
| exon-intron | KMT2A | 11 | + | AFF1 | 4 | + |
| exon-intron | KMT2A | 11 | + | AFF1 | 4 | + |
| intron-exon | MLLT1 | 19 | - | KMT2A | 11 | + |
| exon-intron | KMT2A | 11 | + | AFF1 | 4 | + |
| exon-intron | KMT2A | 11 | + | AFF1 | 4 | + |
| exon-intron | KMT2A | 11 | + | AFF1 | 4 | + |
| exon-exon | KIAA1549 | 7 | - | BRAF | 7 | - |
| intron-exon | ASB3 | 2 | - | CES2 | 16 | + |
| exon-intron | YWHAQ | 2 | - | DDX5 | 17 | - |
| intron-exon | ZMYM4 | | + | HSP90B1 | 12 | + |
| exon-exon | RNA45SN3 | 21 | + | TENT2 | 5 | + |
| intron-exon | EHF | 11 | + | RPL13AP25 | 13 | - |
| intron-exon | PCNX4 | 14 | + | RBFOX2 | 22 | - |
| exon-exon | PTPN13 | 4 | + | TUBA1A | 12 | - |
| exon-exon | BICC1 | 10 | + | SMTN | 22 | + |
| exon-exon | RNA45SN2 | 21 | + | ACTG2 | 2 | + |
| intron-exon | GAS5 | 1 | - | SCGN | 6 | + |
| exon-exon | RNA45SN2 | 21 | + | CALM2 | 2 | - |
| exon-exon | ITGA6 | 2 | + | COX2 | MT | + |
| exon-exon | SCCPDH | 1 | + | LUM | 12 | - |
| exon-intron | ITGB3 | 17 | + | PATJ | 1 | + |
| exon-exon | FAM217B | 20 | + | EIF3A | 10 | - |
| exon-exon | GSE1 | 16 | + | FAR1 | 11 | + |
| exon-intron | NKX2-1 | 14 | - | SFTA3 | 14 | - |
| exon-exon | SNIP1 | 1 | - | COL1A2 | 7 | + |
| exon-exon | GNE | 9 | - | COL1A2 | 7 | + |
| intron-exon | RPAIN | 17 | + | EIF4A2 | 3 | + |
| exon-exon | LOC107984814 | 16 | + | LOC101927978 | 16 | + |
| exon-exon | ASB13 | 10 | - | SOX7 | 8 | - |
| exon-exon | AKAP9 | 7 | + | TRPS1 | 8 | - |
| intron-exon | LINGO2 | 9 | - | EIF3E | 8 | - |
| intron-exon | GTF3C4 | 9 | + | PSMC2 | 7 | + |
| exon-exon | CADM2 | 3 | + | FARP1 | 13 | + |
| exon-intron | RNA45SN3 | 21 | + | GAREM1 | 18 | - |
| exon-intron | RBM5 | 3 | + | CASC15 | 6 | + |
| exon-exon | RNA45SN2 | 21 | + | ILF3 | 19 | + |
| exon-exon | RNA45SN3 | 21 | + | SFPQ | 1 | - |
| intron-exon | EBF1 | 5 | - | ACTG1 | 17 | - |
| intron-exon | PSAP | 10 | - | EEF1A1P5 | 9 | + |
| intron-exon | CEP128 | 14 | - | RHOA | 3 | - |
| exon-exon | TUBB | 6 | + | TUBBP1 | | + |
| intron-exon | RNR2 | MT | + | CMTR2 | 16 | - |
| intron-exon | UTRN | 6 | + | MCM3 | 6 | - |
| exon-intron | AGO2 | 8 | - | RPL6P27 | 18 | - |
| exon-exon | RNA45SN1 | 21 | + | TSPAN4 | 11 | + |
| exon-exon | GOLGB1 | 3 | - | BCAS2 | 1 | - |
| exon-exon | GPX8 | 5 | + | ARPC2 | 2 | + |
| exon-exon | H2BC21 | 1 | - | HNRNPA1P10 | 19 | - |
| exon-intron | PSMB2 | 1 | - | GAREM1 | 18 | - |
| exon-exon | BUB1 | 2 | - | RGS2 | 1 | + |
| exon-exon | LRRC58 | 3 | - | VIM | 10 | + |
| exon-exon | RNA45SN1 | 21 | + | EEF1A1 | 6 | - |
| exon-intron | WDR74 | 11 | - | KNG1 | 3 | + |
| intron-exon | JAZF1 | 7 | - | VIM | 10 | + |
| intron-exon | KALRN | 3 | + | ELF3 | 1 | + |
| intron-exon | GPCPD1 | 20 | - | ALAS2 | X | - |
| exon-intron | DPF3 | | - | RGS6 | 14 | - |
| exon-exon | KRT5 | 12 | - | KRT6A | 12 | - |
| intron-exon | CDK17 | 12 | - | SEPTIN7 | 7 | + |
| exon-exon | MALAT1 | 11 | + | SFXN1 | 5 | + |
| intron-exon | ENSA | 1 | - | DPF2 | 11 | + |
| intron-exon | PSMF1 | 20 | + | CD55 | 1 | + |
| intron-exon | UMAD1 | 7 | + | GLCCI1 | 7 | + |
| exon-exon | RPL31 | 2 | + | ITM2B | 13 | + |
| exon-exon | SSB | 2 | + | MMP2 | 16 | + |
| exon-exon | ZNF117 | 7 | - | PEPD | 19 | - |
| exon-exon | RNA45SN1 | 21 | + | DCTN2 | 12 | - |
| exon-exon | GAPDH | 12 | - | MDK | 11 | + |
| exon-exon | SNRPA | 19 | + | EIF3I | 1 | + |
| exon-exon | DCAF13 | 8 | + | EEF1A1 | 6 | - |
| exon-exon | UBE2G2 | 21 | - | TNFRSF1A | 12 | - |
| intron-exon | RNR2 | MT | + | SENP3-EIF4A1 | 17 | + |
| exon-intron | NAA50 | 3 | - | RNR2 | MT | + |
| exon-exon | SRI | 7 | - | LPCAT3 | 12 | - |
| exon-exon | KAT6B | 10 | + | NRDC | 1 | - |
| intron-exon | MMS22L | 6 | - | NUP93 | 16 | + |
| exon-exon | PANK3 | 5 | - | PKM | 15 | - |
| exon-exon | RBPJ | 4 | + | GLB1 | 3 | - |
| exon-exon | PHF23 | 17 | - | RRM1 | 11 | + |
| exon-exon | MTM1 | X | + | LPCAT3 | 12 | - |
| exon-intron | CANX | 5 | + | RCC1 | 1 | + |
| exon-intron | NUDT10 | X | + | TTC37 | 5 | - |
| exon-exon | CBWD6 | 9 | - | MTREX | 5 | + |
| exon-exon | STK24 | 13 | - | RNF4 | 4 | + |
| exon-exon | ITM2B | 13 | + | ZNF207 | 17 | + |
| intron-exon | CIAO2A | 15 | - | EIF4G2 | 11 | - |
| exon-exon | MT2A | 16 | + | CDK2 | 12 | + |
| exon-exon | RPS3A | 4 | + | GNL2 | 1 | - |
| exon-exon | EEF1A1 | 6 | - | PAICS | 4 | + |
| exon-exon | RHOC | 1 | - | RHOA | 3 | - |
| exon-exon | DDIAS | 11 | + | KIFAP3 | 1 | - |
| exon-exon | RPL34 | 4 | + | PCCB | 3 | + |
| intron-exon | RNA18SP5 | 21 | + | ATP1A1 | 1 | + |
| exon-exon | AP4M1 | 7 | - | MCM7 | 7 | - |
| exon-exon | RPL39P3 | 6 | - | CCNG1 | 5 | + |
| exon-exon | CCDC141 | 2 | - | GMPS | 3 | + |
| exon-intron | COX6A1 | 12 | + | CZIB | 1 | - |
| exon-exon | CEP78 | 9 | + | EIF4G3 | 1 | - |
| exon-exon | STAT6 | 12 | - | ADGRL2 | 1 | + |
| exon-exon | MUC16 | 19 | - | DNAJC22 | 12 | + |
| exon-exon | HNRNPM | 19 | + | ZNF142 | 2 | - |
| exon-intron | RNA45SN3 | 21 | + | LIMK2 | 22 | + |
| exon-exon | RNA45SN2 | 21 | + | NOP56 | 20 | + |
| exon-exon | NDUFA4 | 7 | - | EPRS1 | 1 | - |
| exon-exon | H2BC12 | 6 | - | PTK7 | 6 | + |
| exon-exon | S100A6 | 1 | - | PRPF8 | 17 | - |
| exon-exon | RNA45SN2 | 21 | + | USP10 | 16 | + |
| exon-intron | MYO1E | 15 | - | CCNB2 | | - |
| exon-exon | RPL11 | 1 | + | STRN4 | 19 | - |
| exon-exon | RNA45SN1 | 21 | + | KRT18 | 12 | + |
| intron-exon | RNA18SP5 | 21 | + | TGFBI | 5 | + |
| exon-exon | SLC38A2 | 12 | - | POR | 7 | + |
| exon-exon | RNU1-2 | 1 | + | TNFRSF1A | 12 | - |
| exon-exon | ZNF468 | | - | ZNF28 | | - |
| exon-intron | RNA45SN2 | 21 | + | LGMN | 14 | - |
| exon-exon | RNU1-4 | 1 | + | HTATSF1 | X | + |
| exon-exon | RNA45SN2 | 21 | + | TFPI2 | 7 | - |
| exon-exon | WDR74 | 11 | - | IGF2BP3 | 7 | - |
| exon-exon | STT3A | 11 | + | LIPG | 18 | + |
| exon-intron | OCA2 | | - | AC021979.2 | | - |
| intron-exon | NMT1 | 17 | + | DENND2B | 11 | - |
| exon-exon | HNRNPH1 | 5 | - | TRAM2 | 6 | - |
| exon-exon | SLC39A6 | 18 | - | RHOA | 3 | - |
| intron-exon | RNR1 | MT | + | EEF1A1 | 6 | - |
| intron-exon | GATAD2B | 1 | - | CD24 | 6 | - |
| exon-exon | MALAT1 | 11 | + | TG | 8 | + |
| exon-exon | SIRT4 | 12 | - | TG | 8 | + |
| exon-exon | MALAT1 | 11 | + | RPL4 | 15 | - |
| exon-exon | ND2 | MT | + | RACK1 | 5 | - |
| exon-intron | RNA45SN3 | 21 | + | ARL4D | 17 | + |
| exon-exon | HNRNPH3 | 10 | + | NDUFA9 | 12 | + |
| exon-exon | SOX11 | 2 | + | PGK1 | X | + |
| exon-exon | NAE1 | 16 | - | ENO2 | 12 | + |
| intron-exon | SPDL1 | 5 | + | KLC1 | 14 | + |
| exon-exon | PSMC5 | 17 | + | ATP5F1A | 18 | - |
| exon-exon | HSP90AA1 | 14 | - | NFRKB | 11 | - |
| exon-exon | RD3 | 1 | - | PRPF4B | 6 | + |
| exon-intron | LINC01278 | X | - | RAB7A | 3 | + |
| exon-intron | TCF7L1 | 2 | - | RNA18SP5 | 21 | - |
| exon-exon | HNRNPA1 | 12 | - | TUBB | 6 | - |
| exon-intron | CDK2AP2 | 11 | + | RBM26 | 13 | + |
| exon-exon | RPS19 | 19 | - | SREBF2 | 22 | - |
| exon-exon | RTN2 | 19 | + | RNA45SN1 | 21 | - |
| exon-exon | KRT16 | 17 | + | KRT17 | 17 | + |
| exon-exon | FUBP3 | 9 | - | CTNNB1 | 3 | - |
| intron-exon | KIF28P | 1 | - | LINC01341 | 1 | - |
| exon-exon | ZDHHC11B | | + | ZDHHC11 | | + |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| exon-intron | PDAP1 | 7 | - | ARPC1B | 7 | - |
| exon-exon | PPM1H | 12 | - | PPM1H | 12 | + |
| intron-exon | NDRG2 | 14 | + | RNASE7 | 14 | + |
| exon-exon | BEST1 | 11 | + | MBTPS1 | 16 | + |
| exon-intron | EML4 | 2 | - | LOC107985873 | 2 | - |
| intron-exon | DIAPH2 | X | + | RMND5A | 2 | - |
| intron-exon | SKAP1 | 17 | - | RPL12P4 | | - |
| exon-exon | EEF1A1 | 6 | + | EEF1A1P13 | 5 | - |
| intron-exon | SLFN12L | | + | TAF5LP1 | | + |
| exon-exon | CDK13 | 7 | + | ATP5PB | 1 | + |
| intron-exon | LOC112268284 | 21 | - | RNA45SN2 | 21 | + |
| intron-exon | MTATP6P1 | 1 | + | ATP8 | MT | + |
| intron-exon | RNA18SP5 | 21 | - | RNA45SN2 | 21 | - |
| exon-exon | RPL39 | X | + | TALAM1 | 11 | - |
| intron-exon | ATP5PO | 21 | - | MATN1-AS1 | 1 | - |
| exon-intron | KTN1 | 14 | + | INSYN2B | 5 | - |
| intron-exon | ATG10 | 5 | + | ZIK1 | 19 | - |
| intron-exon | SLC41A3 | 3 | - | KAT6A | 8 | + |
| intron-exon | YAF2 | 12 | - | DMTF1 | 7 | + |
| intron-exon | NLGN4Y | | + | DUSP26 | | - |
| intron-exon | AUTS2 | 7 | + | MGAT4A | 2 | - |
| exon-exon | MED4 | 13 | + | MED4-AS1 | 13 | + |
| exon-intron | LOC101926935 | | + | SNAP25 | 20 | - |
| exon-intron | TUBB2B | 6 | + | CHN1 | 2 | + |
| exon-exon | CDC42EP3 | 2 | - | FSCN1 | 7 | + |
| exon-exon | RNA45SN2 | 21 | + | ILK | 11 | + |
| exon-exon | RNA45SN1 | 21 | + | HNRNPAB | 5 | + |
| exon-intron | NMRK1 | | + | SCN2A | | - |
| exon-exon | COPS8 | 2 | + | PIP4K2B | 17 | - |
| exon-exon | RN7SK | 6 | + | HNMT | | + |
| exon-exon | RNU1-2 | 1 | + | RAD23A | 19 | + |
| exon-intron | RN7SK | 6 | + | LDB2 | | - |
| intron-exon | TRNL1 | MT | + | SBNO1 | 12 | - |
| exon-intron | LINC01201 | | + | ARHGAP36 | | + |
| intron-exon | ADGRB3 | 6 | + | MTURN | 7 | + |
| exon-intron | SDS | 12 | + | GNA14 | 9 | - |
| exon-exon | RNA45SN2 | 21 | + | XIST | X | - |
| intron-exon | CNTN5 | 11 | + | LITAF | 16 | + |
| exon-exon | RNA45SN3 | 21 | + | HHEX | 10 | + |
| exon-intron | IGHG3 | 14 | - | IGH | 14 | - |
| exon-exon | COMMD5 | 8 | + | GPRC5C | 17 | + |
| exon-exon | EIF2A | 3 | - | GLUL | 1 | - |
| exon-exon | PSME2 | 14 | - | ANKRD46 | 8 | - |
| exon-intron | NDUFAF8 | 17 | + | NF1 | 17 | - |
| intron-exon | GLI2 | 2 | + | SH3BGRL3 | 1 | + |
| exon-exon | RNA45SN3 | 21 | + | TMSB4X | X | + |
| exon-exon | RNA45SN1 | 21 | + | FGG | 4 | - |
| exon-exon | SMG1 | 16 | - | CYP2C9 | 10 | + |
| intron-exon | ALDH3A2 | 17 | + | LOC646214 | 15 | - |
| exon-exon | AOX1 | 2 | + | ALB | 4 | + |
| exon-intron | NINJ1 | 9 | - | GRM8 | 7 | + |
| intron-exon | ABLIM3 | 5 | - | ALB | 4 | + |
| exon-exon | RPSA | 3 | + | SELENOP | 5 | - |
| exon-exon | FGG | 4 | - | SLC47A1 | 17 | + |
| exon-intron | APOC3 | 11 | + | MID1 | X | - |
| exon-intron | MRPL18 | 6 | + | TBCEL | 11 | + |
| intron-exon | SLC5A10 | 17 | + | FGG | 4 | - |
| exon-exon | RNA45SN1 | 21 | + | ALB | 4 | + |
| intron-exon | SUCLG2 | 3 | - | RBP4 | 10 | - |
| exon-exon | LOC102724951 | 21 | + | CTBP2P10 | 21 | + |
| exon-exon | SETDB1 | 1 | - | CFHR1 | 1 | + |
| exon-intron | DHX9 | 1 | + | MOB3B | 9 | + |
| exon-exon | MRPS10 | 6 | - | PPID | 4 | - |
| exon-intron | SCP2 | 1 | + | VPS13B | 8 | - |
| exon-intron | COX5B | 2 | + | PPHLN1 | 12 | + |
| exon-intron | MAP2K7 | 19 | + | NBPF14 | 1 | - |
| exon-intron | ALB | 4 | + | NCOA6 | 20 | - |
| intron-exon | TBC1D5 | 3 | + | LOC339862 | 3 | + |
| intron-exon | SEC22C | 3 | - | SERPINC1 | 1 | - |
| intron-exon | NFE2L1 | 17 | + | C9 | 5 | - |
| intron-exon | WDR26 | 1 | - | MCUR1 | 6 | - |
| exon-intron | IGKC | 2 | - | AC244205.1 | 2 | - |
| exon-intron | PVRIG2P | 7 | + | PILRB | 7 | + |
| exon-exon | RNA45SN2 | 21 | + | TMSB4XP8 | 4 | - |
| intron-exon | LOC339862 | 3 | - | PLRG1 | 4 | - |
| exon-intron | INS-IGF2 | 11 | - | RP11-325K19.1 | 18 | - |
| exon-intron | ATP6 | MT | + | COX3 | MT | + |
| intron-exon | NPNT | 4 | - | CCDC191 | 3 | - |
| intron-exon | USF1 | 1 | - | ELOVL5 | 6 | - |
| intron-exon | LINC01006 | 7 | + | ALB | 4 | + |
| exon-intron | RNA45SN1 | 21 | - | TIMM9 | 14 | - |
| exon-exon | COLEC10 | 8 | - | SLC7A2 | 8 | + |
| intron-exon | HLA-H | 6 | + | HLA-K | 6 | + |
| intron-exon | WASHC4 | 12 | + | ARHGDIB | 12 | - |
| exon-exon | PGAM2 | 7 | + | DBNL | 7 | + |
| exon-intron | LOC102724830 | 1 | - | ATP5MF-PTCD1 | 7 | - |
| intron-exon | IGH | 14 | - | IGHM | 14 | - |
| intron-exon | IL1RAPL2 | X | - | EFEMP1 | 2 | - |
| exon-intron | OIP5-AS1 | 15 | + | TBC1D22A | 22 | + |
| intron-exon | MST1 | 3 | - | COL2A1 | 12 | - |
| exon-exon | LOC101929950 | 17 | + | TBC1D3E | 17 | + |
| intron-exon | GLMN | 1 | - | FXYD5 | 19 | + |
| exon-intron | CENPC | 4 | - | PITPNC1 | 17 | - |
| intron-exon | RPS25P2 | 1 | + | CACFD1 | 9 | + |
| exon-exon | SF3A3 | 1 | - | ZNF83 | 19 | - |
| exon-exon | NIPSNAP1 | 22 | + | ANGPTL3 | 1 | + |
| intron-exon | LINC01426 | 21 | - | PYGL | 14 | - |
| exon-intron | PIGM | 1 | - | KCNJ10 | 1 | - |
| exon-exon | RNA45SN3 | 21 | + | TMSB4XP8 | 4 | - |
| exon-exon | RNA45SN1 | 21 | - | CRYZ | 1 | - |
| exon-exon | CPS1 | 2 | + | PRDX3 | 10 | - |
| intron-exon | NR2F1-AS1 | 5 | + | CYP2A6 | 19 | - |
| intron-exon | RPS25P2 | 1 | + | CACFD1 | 9 | + |
| intron-exon | CYP2C8 | 10 | + | MTG2 | 20 | + |
| exon-intron | C5orf34-AS1 | 5 | + | AC114956.1 | 5 | + |
| exon-intron | PHGDH | 1 | - | LOC105378937 | 1 | - |
| intron-exon | NUP107 | 12 | - | JDP2 | 14 | - |
| exon-exon | RNA45SN3 | 21 | + | RPL13A | 19 | + |
| exon-exon | COA3 | 17 | - | LOC791096 | X | - |
| exon-intron | IGKC | 2 | + | IGK | 2 | + |
| exon-exon | LINC00869 | 1 | + | LOC100996741 | 1 | - |
| exon-exon | RPL12 | 9 | - | IGKC | 2 | - |
| exon-exon | LOC105375928 | 8 | + | SLC19A2 | 1 | - |
| exon-intron | ATP6 | MT | + | COX3 | MT | + |
| exon-intron | FMOD | 1 | - | CORIN | 4 | + |
| exon-intron | MTMR14 | 3 | + | KLC1 | 14 | - |
| exon-exon | HAO2 | 1 | + | HSPA5 | 9 | + |
| exon-intron | ND4 | MT | + | COL15A1 | 9 | + |
| exon-intron | LINC01595 | 19 | + | GSG1L | 16 | - |
| exon-exon | RHCE | 1 | - | TMEM50A | 1 | - |
| exon-exon | PHAX | | + | ND3 | MT | + |
| intron-exon | RNR1 | MT | + | ND2 | MT | + |
| exon-exon | COX1 | MT | + | PSAP | 10 | - |
| exon-intron | ND4 | MT | + | LOC105370328 | | - |
| exon-intron | COX2 | MT | + | ADAM9 | 8 | - |
| intron-exon | RNR1 | MT | + | DDR2 | 1 | + |
| intron-exon | SPTBN1 | 2 | + | COX1 | MT | + |
| exon-exon | PPP1R15A | 19 | + | HSPA1A | 6 | + |
| exon-intron | RNA45SN3 | 21 | + | RPL13AP25 | 13 | - |
| exon-exon | TMEM59 | 1 | + | KPNA5 | | - |
| exon-exon | RN7SK | 6 | + | AKR1B1 | 7 | - |
| exon-intron | CUTA | 6 | - | SPPL3 | 12 | + |
| exon-intron | LOC105370447 | | + | HP1BP3 | 1 | + |
| exon-exon | STAR | 8 | - | FTH1 | 11 | - |
| exon-exon | SKIV2L | 6 | + | ABCA8 | 17 | - |
| exon-intron | RNA45SN2 | 21 | + | COX3 | MT | + |
| intron-exon | SPRYD4 | 12 | - | MIP | 12 | - |
| intron-exon | HFM1 | 1 | - | TUFM | 16 | - |
| exon-intron | MMAB | 12 | - | LINC01578 | 15 | - |
| exon-intron | ND4 | MT | - | NLRC4 | | - |
| intron-exon | RNR1 | MT | + | PEBP1 | 12 | + |
| exon-exon | SWI5 | 9 | + | CYTB | MT | + |
| exon-exon | RNA45SN3 | 21 | + | ATP6 | MT | + |
| exon-intron | GIMAP6 | | - | WWP2 | 16 | + |
| exon-exon | UNC119 | 17 | - | PNPLA2 | 11 | + |
| exon-exon | GCN1 | 12 | - | ADGRV1 | 5 | + |
| exon-exon | RNA45SN1 | 21 | + | DYNLL1 | 12 | + |
| exon-exon | GPI | 19 | + | STAR | 8 | - |
| exon-exon | RNA45SN2 | 21 | + | CCZ1 | 7 | + |
| exon-intron | IFITM2 | 11 | - | RNF130 | 5 | - |
| exon-intron | CUTA | 6 | - | HOXC13 | 12 | - |
| exon-exon | RNA45SN2 | 21 | + | ACTB | 7 | - |
| exon-exon | ND4 | MT | + | YWHAB | 20 | + |
| exon-intron | GUK1 | 1 | + | HOOK2 | 19 | - |
| exon-exon | HNRNPA2B1 | 7 | - | RPL19 | 17 | + |
| exon-intron | CSPG4P12 | 15 | + | ACTN4 | 19 | + |
| exon-intron | FAU | 11 | - | UBE2E2 | 3 | + |
| exon-exon | CYP17A1 | 10 | - | ATP1B1 | 1 | + |
| intron-exon | AP000446.1 | | + | ATP6 | MT | + |
| intron-exon | RNA28SP | 21 | + | EIF4A3 | 17 | - |
| exon-exon | AIFM2 | 10 | - | GAS7 | 17 | - |
| exon-exon | RNA45SN1 | 21 | + | HIF1A | 14 | + |
| exon-intron | PRDM4 | 12 | - | PWP1 | 12 | - |
| exon-exon | RNA45SN2 | 21 | + | TMSB4X | X | + |
| exon-exon | LRP3 | 19 | + | GATA6-AS1 | 18 | - |
| exon-exon | RNA45SN3 | 21 | + | TIMP2 | 17 | - |
| exon-intron | MALAT1 | 11 | + | MEG3 | 14 | + |
| intron-exon | RNR2 | MT | + | MALAT1 | 11 | + |
| exon-exon | TRIM62 | 1 | - | RPAIN | 17 | + |
| exon-exon | H1-10 | 3 | - | HEXIM1 | 17 | + |
| exon-exon | RNA45SN2 | 21 | + | CYP21A2 | 6 | + |
| exon-exon | RNA45SN1 | 21 | + | RNF114 | 20 | + |
| exon-exon | PLIN3 | 19 | - | TMIGD3 | 1 | - |
| exon-exon | IDH3B | 20 | - | CHCHD2 | 7 | - |
| intron-exon | DCPS | 11 | + | C7 | 5 | + |
| exon-exon | RNA45SN1 | 21 | + | BAIAP2L1 | 7 | - |
| exon-exon | SERF2-C15ORF63 | 15 | + | STAR | 8 | - |
| exon-exon | RBM4 | 11 | + | FAM156A | X | - |
| exon-exon | COA8 | 14 | + | MOB3A | 19 | - |
| intron-exon | DEDD | | - | CXCL2 | | - |
| exon-exon | RNA45SN1 | 21 | - | PTMA | 2 | + |
| exon-intron | MEG3 | 14 | + | AEBP2 | 12 | + |
| intron-exon | FIBCD1 | | + | LOC105376297 | | + |
| intron-exon | RNA18SP5 | 21 | + | SCARB1 | 12 | - |
| exon-exon | RNA45SN1 | 21 | + | ABI3 | | + |
| intron-exon | SHISA8 | 22 | - | STAR | 8 | - |
| exon-exon | COL4A5 | X | + | ND2 | MT | + |
| intron-exon | CYP17A1 | 10 | - | LHFPL6 | 13 | - |
| exon-intron | MICAL3 | 22 | - | GALT | 9 | + |
| exon-exon | RNA45SN3 | 21 | + | COX3 | MT | + |
| exon-exon | RNA45SN3 | 21 | + | ND5 | MT | + |
| exon-exon | RNA45SN3 | 21 | + | LOC101927262 | 2 | + |
| exon-intron | CZIB | 1 | - | PELI1 | | + |
| intron-exon | BLOC1S1-RDH5 | 12 | - | MCOLN3 | 1 | - |
| exon-exon | MEG3 | 14 | + | MADD | 11 | + |
| intron-exon | LZTS3 | 20 | - | MEF2D | 1 | - |
| intron-exon | CCDC7 | 10 | + | TAOK1 | 17 | + |
| intron-exon | SMTN | 22 | + | CHI3L1 | 1 | - |
| exon-exon | RNA45SN1 | 21 | + | SLC25A1 | 22 | - |
| exon-exon | DHCR24 | 1 | - | RPLP0 | 12 | - |
| exon-intron | MALAT1 | 11 | + | RNR2 | MT | + |
| intron-exon | RNA18SP5 | 21 | + | ND4 | MT | + |
| exon-exon | ND4 | MT | + | RGS2 | 1 | + |
| exon-intron | MALAT1 | 11 | + | RNR2 | MT | + |
| intron-exon | RNA28SP | 21 | + | CYP17A1 | 10 | - |
| exon-intron | ARF3 | 12 | - | MEA1 | 6 | - |
| exon-intron | KDM4A-AS1 | 1 | - | AKR1B1 | 7 | - |
| intron-exon | RNR2 | MT | + | GLRA2 | X | + |
| exon-intron | EEF1B2P3 | X | - | POLA1 | X | - |
| intron-exon | PAPSS2 | | - | ZMAT2 | | + |
| exon-intron | TENM1 | X | - | DLC1 | 8 | - |
| intron-exon | RNA28SP | 21 | + | CYTB | MT | + |
| intron-exon | PSAP | 10 | - | KIAA1841 | 2 | + |
| exon-intron | SAV1 | 14 | - | ATL1 | 14 | - |
| exon-intron | MAP4K5 | 14 | + | RNR2 | MT | + |
| exon-exon | RNA45SN2 | 21 | + | PRDX2 | 19 | - |
| intron-exon | BMP1 | 8 | + | ND2 | MT | + |
| exon-intron | LAMP2 | X | - | MYO18B | 22 | - |
| intron-exon | LOC107985305 | 19 | - | ERGIC1 | 5 | + |
| intron-exon | POP5 | 12 | - | KLHL28 | 14 | - |
| exon-intron | PRDX1 | 1 | - | TRIM37 | 17 | + |
| exon-intron | LOC105375645 | | + | NT5C2 | 10 | + |
| intron-exon | MTATP6P1 | 1 | - | ZNF541 | 19 | - |
| exon-exon | CREG1 | 1 | - | LOC107985224 | | - |
| exon-intron | SLC25A6 | Y | - | TUBB8B | 18 | + |
| exon-intron | SLC25A6 | Y | - | DIAPH3 | 13 | - |
| intron-exon | RNR2 | MT | + | COX3 | MT | + |
| exon-intron | EIF6 | 20 | - | EVL | 14 | - |
| exon-intron | CYP17A1 | 10 | - | MOK | 14 | + |
| intron-exon | EYS | 6 | + | SCARB2 | 4 | - |
| exon-exon | ND4L | MT | + | ND4 | MT | + |
| intron-exon | RNA28SP | 21 | + | RAB13 | 1 | - |
| intron-exon | LOC112997538 | | + | COPS4 | 4 | + |
| exon-intron | RNA45SN2 | 21 | + | RPL7P9 | 1 | - |
| intron-exon | RNR2 | MT | + | TMSB4X | X | + |
| exon-intron | EAF2 | | + | RNR2 | MT | + |
| exon-exon | LOC100287402 | 3 | + | TMEM167B | | + |
| intron-exon | SNHG5 | 6 | - | ADAMDEC1 | 8 | + |
| exon-intron | S100A4 | 1 | - | AL157788.1 | | + |
| exon-intron | HNRNPA2B1 | 7 | - | PPP4R2 | 3 | + |
| exon-intron | AIF1 | 6 | + | ZMYND8 | 20 | + |
| exon-intron | IL2RG | X | - | PCDH15 | 10 | - |
| exon-intron | S100A4 | 1 | - | UBL7-AS1 | | - |
| exon-intron | ND4 | MT | + | DEPDC5 | 22 | - |
| exon-intron | ENO1 | 1 | - | AC022523.1 | | + |
| exon-intron | C12orf57 | 12 | + | EBF4 | | + |
| exon-intron | SEM1 | 7 | - | ZNF541 | 19 | - |
| exon-exon | RNA45SN2 | 21 | + | ATP6 | MT | + |
| exon-exon | HDAC3 | 5 | - | S100B | 21 | - |
| intron-exon | LINC02196 | | - | ARX | | - |
| exon-exon | NCL | 2 | - | NPY | 7 | + |
| exon-exon | SIRT3 | 11 | - | ORM2 | 9 | - |
| intron-exon | MAP3K3 | 17 | - | LOC100913082 | 14 | + |
| exon-intron | MT2A | 16 | - | SMCHD1 | 18 | - |
| exon-exon | GMPR | | + | ND4 | MT | + |
| exon-intron | FLYWCH2 | 16 | + | NCBP3 | 17 | + |
| exon-intron | MAP1B | 5 | + | LOC105376244 | 9 | + |
| exon-intron | RNA45SN2 | 21 | + | NEDD8-MDP1 | 14 | - |
| exon-intron | EMC10 | 19 | - | POLD1 | | - |
| intron-exon | FHOD3 | | + | ZYG11B | 1 | + |
| exon-intron | RNA45SN3 | 21 | + | TRNAU1AP | 1 | + |
| intron-exon | DIPK1C | | - | ND4 | MT | + |
| exon-intron | FBXW2 | 9 | - | TMEM168 | 7 | - |
| exon-exon | DYRK1A | 21 | + | RAB3B | 1 | - |
| intron-exon | IGFL4 | | - | ATP6 | MT | + |
| exon-exon | RNA45SN3 | 21 | + | ACTG1 | 17 | - |
| exon-exon | RNA45SN3 | 21 | + | FTH1 | 11 | - |
| exon-intron | RNA45SN1 | 21 | + | ZNF592 | 15 | + |
| exon-exon | RNA45SN1 | 21 | + | MBP | 18 | - |
| exon-exon | NPC2 | 14 | - | SRI | 7 | - |
| exon-exon | RNA45SN1 | 21 | + | RPL6P27 | 18 | - |
| intron-exon | LOC105371679 | | - | NR2C1 | 12 | - |
| exon-intron | TRAPPC9 | 8 | - | SIAH2-AS1 | | - |
| exon-intron | TNFRSF14 | 1 | + | USP50 | 15 | - |
| exon-intron | LOC105372493 | | - | LOC105372494 | | - |
| exon-exon | RNA45SN3 | 21 | + | RBM6 | 3 | + |
| exon-exon | RNA45SN1 | 21 | + | NR2F1 | 5 | + |
| intron-exon | LOC105375988 | 9 | + | CEBPD | 8 | - |
| exon-intron | RNA45SN2 | 21 | + | GTF2IP1 | 7 | - |
| exon-intron | MBP | 18 | + | RNR2 | MT | + |
| exon-exon | CYTB | MT | + | CHN1 | 2 | - |
| exon-exon | RBM12B | 8 | + | GPRC5B | 16 | - |
| exon-exon | C1QBP | 17 | - | TALAM1 | 11 | - |
| exon-intron | CRIM1 | 2 | + | CTNNA2 | 2 | + |
| exon-intron | ATP6 | MT | + | COX3 | MT | + |
| intron-exon | CHADL | 22 | - | PEG10 | 7 | + |
| exon-intron | NOP58 | 2 | - | LOC100131626 | 11 | - |
| exon-exon | PLP1 | X | + | MAN2A2 | 15 | + |
| exon-exon | ANAPC10 | 4 | + | ABCE1 | 4 | + |
| exon-intron | CNP | 17 | + | ERRFI1 | 1 | - |
| exon-intron | SLC6A11 | 3 | + | SYN3 | 22 | + |
| exon-exon | RNA45SN3 | 21 | + | TACC1 | 8 | + |
| exon-exon | CNTN4 | 3 | + | B3GNT2 | 2 | + |
| intron-exon | PDE1C | 7 | - | LAT2 | 7 | + |
| intron-exon | RNR1 | MT | + | FTH1 | 11 | - |
| exon-exon | ADAMTS4 | 1 | - | PDE6D | 2 | - |
| exon-exon | BTN3A1 | 6 | + | IQSEC1 | 3 | - |
| intron-exon | GOLM2 | 15 | + | WDR55 | 5 | + |
| exon-exon | COX1 | MT | + | ATP1A2 | 1 | + |
| intron-exon | RNR1 | MT | + | GGPS1 | 1 | + |
| exon-exon | RNA45SN1 | 21 | + | ND4 | MT | + |
| exon-exon | SPARC | 5 | + | SNAP25 | 20 | + |
| exon-exon | NAXE | 1 | - | ARMC1 | 8 | - |
| intron-exon | FRMD4B | 3 | + | NOMO1 | 16 | + |
| exon-exon | LAMA3 | 18 | + | SNAP25 | 20 | + |
| exon-exon | SEC24B | 4 | + | MALAT1 | 11 | + |
| exon-exon | SDSL | 12 | + | MBOAT7 | 19 | - |
| exon-exon | RNA45SN1 | 21 | + | RNF130 | 5 | - |
| exon-exon | RNA45SN3 | 21 | + | RNF130 | 5 | - |
| exon-exon | NEAT1 | 11 | + | ATP6 | MT | + |
| exon-intron | GAS8 | 16 | + | LINC02193 | | + |
| exon-exon | IGSF1 | X | - | LYPD1 | 2 | - |
| exon-intron | ZBTB10 | | - | LOC105375921 | | - |
| exon-exon | CRKL | 22 | + | ARHGEF6 | X | - |
| exon-exon | LONRF2 | 2 | - | CLU | 8 | - |
| exon-intron | RNA45SN2 | 21 | + | RNR2 | MT | + |
| exon-intron | OIP5-AS1 | 15 | + | ADGRA1 | | + |
| intron-exon | LOC105371814 | 17 | + | ATP5MC1 | 17 | + |
| exon-intron | H3P4 | | + | AC244453.1 | | + |
| exon-exon | THRAP3 | 1 | + | DSCAML1 | 11 | - |
| exon-exon | SZT2 | 1 | + | ATP5MG | 11 | + |
| intron-exon | LINC01362 | | + | FAM214A | 15 | + |
| exon-exon | MBNL2 | 13 | + | SCG2 | 2 | - |
| exon-exon | SRRM2 | 16 | + | P4HTM | 3 | + |
| exon-exon | MBP | 18 | - | FEZ1 | 11 | - |
| exon-intron | RNF187 | 1 | + | RRP36 | 6 | - |
| exon-intron | AK6 | 5 | + | RNR2 | MT | + |
| exon-exon | HIPK2 | 7 | - | ATP6 | MT | + |
| intron-exon | ING5 | | + | NT5DC1 | 6 | + |
| exon-intron | RPS6KL1 | | - | ZPLD2P | | + |
| intron-exon | ING2 | | + | LINC00320 | | - |
| intron-exon | LINC01151 | | - | SMILR | | - |
| intron-exon | RNR2 | MT | + | NRIP3 | 11 | - |
| intron-exon | RNR2 | MT | - | SLC24A2 | 9 | - |
| exon-intron | C11orf24 | | - | SNAP25-AS1 | 20 | - |
| intron-exon | RNR2 | MT | - | MBP | 18 | - |
| exon-intron | RGL2 | 6 | - | PFDN6 | 6 | - |
| intron-exon | GABPB1-AS1 | 15 | + | MIR4712 | | + |
| intron-exon | GARNL3 | | - | PTP4A2 | 1 | - |
| intron-exon | LPCAT1 | 5 | + | SYT1 | 12 | + |
| exon-intron | ND6 | MT | - | DCLK3 | | - |
| intron-exon | LINC02055 | 8 | + | COL4A5 | X | + |
| intron-exon | WDFY4 | 10 | - | TNRC6A | 16 | - |
| intron-exon | RP11-180P8.1 | | - | TRMT112P3 | | - |
| exon-exon | ACVR1C | 2 | + | MESD | 15 | - |
| intron-exon | FBXL19 | 16 | - | FBXL19 | 16 | + |
| exon-intron | PLAGL1 | 6 | + | PEAK1 | 15 | + |
| intron-exon | PRPSAP1 | 17 | + | SPHK1 | | + |
| exon-intron | SCARB2 | 4 | - | LOC105375451 | | - |
| intron-exon | SLC7A14-AS1 | | + | FAM27E3 | 9 | + |
| exon-exon | RNA45SN3 | 21 | + | FTH1 | 11 | - |
| exon-exon | ATP1A3 | 19 | + | CNBP | 3 | - |
| intron-exon | GAS6 | | + | UBN2 | 7 | + |
| intron-exon | KNTC1 | 12 | + | SLC2A3 | 12 | - |
| exon-intron | RNA45SN1 | 21 | + | RNR2 | MT | + |
| intron-exon | GCNT1 | 9 | + | ND2 | MT | + |
| intron-exon | PPP1R12B | 1 | - | RPLP1 | 15 | + |
| exon-exon | SH3PXD2A | 10 | - | HTRA1 | 10 | + |
| intron-exon | FGGY | 1 | + | NFIA | 1 | + |
| exon-intron | FOLR2 | | + | LOC339192 | | - |
| exon-exon | RPN2 | 20 | + | CLEC14A | 14 | - |
| exon-intron | PRDM8 | | + | SNRNP35 | | - |
| exon-intron | UBE3C | 7 | + | ZC3HAV1 | 7 | + |
| exon-intron | TXNIP | 1 | - | ENOSF1 | 18 | - |
| intron-exon | DGKI | 7 | + | TUBA1A | 12 | - |
| exon-intron | RPS25P6 | 5 | - | ARL14EPL | 5 | - |
| exon-intron | CHIC2 | 4 | - | AC058822.1 | 4 | - |
| exon-exon | COX2 | MT | + | CYTB | MT | + |
| intron-exon | PDSS2 | 6 | - | CDK2AP1 | 12 | - |
| exon-exon | SON | 21 | - | XPC | 3 | - |
| exon-exon | ATP5MC1 | 17 | + | MYL6 | 12 | + |
| exon-intron | MLX | 17 | + | LDLRAD4 | 18 | - |
| exon-intron | RPS27P3 | 12 | - | TSPAN9 | 12 | - |
| exon-intron | RPS25P6 | 5 | - | ARL14EPL | 5 | - |
| exon-intron | RPL18 | 19 | - | PPP6R2 | 22 | - |
| exon-intron | CDC26P1 | 7 | - | AHCYL2 | 7 | - |
| exon-intron | TBCAP1 | | + | LINC02227 | | + |
| exon-exon | RPL10P16 | 19 | + | HLA-E | 6 | + |
| exon-intron | LOC102723506 | | - | NFATC1 | 18 | - |
| intron-exon | RAB3GAP2 | 1 | + | MORF4L1P1 | 1 | + |
| exon-intron | CNPY3 | 6 | + | CNPY3-GNMT | 6 | + |
| exon-intron | EEF1B2P3 | X | - | POLA1 | X | - |
| exon-exon | UBB | 17 | - | UBBP4 | | + |
| intron-exon | TRB | 7 | + | TRBC1 | 7 | + |
| exon-intron | RPS25P6 | 5 | - | ARL14EPL | 5 | - |
| exon-intron | SSB | 2 | - | PPP2R5C | 14 | - |
| exon-intron | CDC26P1 | 7 | - | AHCYL2 | 7 | - |
| exon-intron | RPL7AP6 | 14 | - | SMOC1 | 14 | - |
| exon-intron | EPG5 | 18 | - | RNR2 | MT | + |
| exon-intron | RPS27P3 | 12 | - | TSPAN9 | 12 | - |
| exon-intron | CSP3 | 19 | - | ARRDC2 | 19 | - |
| intron-exon | RNR2 | MT | + | COX2 | MT | + |
| exon-intron | MACROH2A1 | 5 | - | RPL39P3 | 6 | - |
| exon-intron | SNX29P1 | | + | NPIPB3 | 16 | + |
| exon-exon | SUPT4H1 | 17 | - | UQCRQ | 5 | + |
| exon-intron | RPL9P8 | 15 | - | UBE2Q2P2 | 15 | - |
| intron-exon | LOC107987267 | 19 | - | RPL38 | 17 | + |
| exon-intron | RPS27P3 | 12 | - | TSPAN9 | 12 | - |
| exon-exon | FOXN2 | 2 | + | CXCR4 | 2 | - |
| intron-exon | RNVU1-2 | | - | MIR6077 | | - |
| intron-exon | LDLRAD4 | 18 | + | SNRPD2 | 19 | - |
| exon-intron | RPL18 | 19 | - | RAB11B-AS1 | | - |
| exon-intron | NFKBIZ | 3 | - | SNX6 | 14 | - |
| intron-exon | AGAP3 | 7 | - | RNA45SN3 | 21 | + |
| intron-exon | PCNP | 3 | + | COX2 | MT | + |
| intron-exon | FAM186B | | + | POLR2KP1 | | + |
| intron-exon | GH1 | 17 | - | GH2 | 17 | - |
| exon-intron | RPL23AP42 | 3 | - | LINC02067 | 3 | - |
| exon-intron | RPS23 | 5 | - | CFAP20 | 16 | - |
| exon-intron | GH1 | 17 | - | GH-LCR | 17 | - |
| exon-exon | C18orf25 | 18 | + | FXR1 | 3 | + |
| exon-exon | RNA45SN3 | 21 | + | RPS8 | 1 | + |
| exon-exon | RNA45SN3 | 21 | + | GH1 | 17 | - |
| exon-exon | RNA45SN3 | 21 | + | LHB | 19 | - |
| intron-exon | CATSPER2 | 15 | + | PPIP5K1P1 | 15 | + |
| exon-exon | RNA45SN1 | 21 | + | PRL | 6 | - |
| exon-intron | ARHGAP30 | | - | ARIH2 | 3 | + |
| intron-exon | RNA18SP5 | 21 | + | GH1 | 17 | - |
| intron-exon | RNA28SP | 21 | + | C15orf61 | 15 | + |
| exon-intron | ND3 | MT | - | ENPP7P6 | | - |
| intron-exon | RNA28SP | 21 | + | GH1 | 17 | - |
| exon-exon | SF1 | 11 | - | CGA | 6 | - |
| exon-exon | RNA45SN3 | 21 | + | PRL | 6 | - |
| intron-exon | ATF6B | 6 | - | GNG4 | 1 | - |
| exon-exon | RNA45SN1 | 21 | + | GH1 | 17 | - |
| exon-exon | RNA45SN1 | 21 | + | PRL | 6 | - |
| exon-exon | GH1 | 17 | - | HDAC1 | 1 | + |
| exon-exon | GTF3C1 | 16 | - | GH1 | 17 | - |
| intron-exon | PLEKHA5 | 12 | + | GALC | 14 | - |
| intron-exon | RNA18SP5 | 21 | + | GH1 | 17 | - |
| exon-exon | GH1 | 17 | - | GUSBP11 | 22 | - |
| exon-exon | FLAD1 | 1 | + | EGR3 | 8 | - |
| exon-exon | MTRF1L | 6 | + | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN3 | 21 | + | GH1 | 17 | - |
| exon-exon | CALM1 | 14 | - | CHGB | 20 | + |
| intron-exon | PDIA3 | 15 | + | ARF1 | 1 | + |
| exon-exon | LOC646762 | 7 | + | DPY19L2P3 | | + |
| exon-exon | RNA45SN1 | 21 | + | PRL | 6 | - |
| exon-intron | RPS25P6 | 5 | - | ARL14EPL | 5 | - |
| exon-exon | RNA45SN2 | 21 | + | CLINT1 | 5 | - |
| exon-exon | KIAA0895L | 16 | - | NOL3 | 16 | - |
| intron-exon | LINC01088 | | + | CYTB | MT | + |
| exon-exon | RNA45SN3 | 21 | + | GH1 | 17 | - |
| intron-exon | GNAL | 18 | + | ZFAND5 | 9 | - |
| exon-exon | RPS2 | 16 | - | GH1 | 17 | - |
| exon-exon | GH1 | 17 | - | CSH1 | 17 | - |
| exon-exon | RNA45SN3 | 21 | + | NUAK2 | | - |
| exon-exon | MALAT1 | 11 | + | MBD3 | 19 | - |
| exon-intron | LOC112268204 | | + | GH-LCR | 17 | + |
| intron-exon | LOC285442 | | - | RNA45SN1 | 21 | - |
| intron-exon | RNA18SP5 | 21 | + | GH1 | 17 | - |
| exon-exon | POMC | 2 | - | STK16 | 2 | + |
| exon-exon | RNA45SN2 | 21 | + | COX2 | MT | + |
| exon-exon | RNA45SN3 | 21 | + | TGFBR3L | 19 | + |
| exon-exon | RNA45SN2 | 21 | + | PRL | 6 | - |
| exon-exon | RNA45SN2 | 21 | + | GH1 | 17 | - |
| exon-exon | TPP1 | 11 | - | PRKAR1A | 17 | + |
| intron-exon | RNA28SP | 21 | + | LY6E | 8 | + |
| intron-exon | RNR1 | MT | + | RPS6KC1 | 1 | + |
| intron-exon | RNR1 | MT | + | HNRNPH3 | 10 | + |
| exon-exon | RPS21 | 20 | + | XIST | X | - |
| intron-exon | WSB1 | 17 | + | ATR | 3 | - |
| intron-exon | NOL4L | 20 | + | RPL13AP5 | 10 | + |
| exon-exon | G2E3 | 14 | - | CDKN2AIP | | + |
| intron-exon | RPS17P16 | 22 | + | CGA | 6 | + |
| exon-exon | RNA45SN2 | 21 | + | RNF4 | 4 | + |
| exon-exon | YWHAG | 7 | + | RNF123 | 3 | + |
| exon-intron | LOC732229 | 19 | - | LIPE-AS1 | 19 | - |
| exon-exon | ND4 | MT | + | LSM7 | 19 | - |
| exon-intron | MALAT1 | 11 | + | RNR2 | MT | + |
| intron-exon | CBX4 | 17 | - | DBI | 2 | + |
| exon-exon | ZC3H4 | 19 | - | PRL | 6 | - |
| exon-intron | RNA45SN3 | 21 | + | SNAP25 | 20 | + |
| exon-exon | RNA45SN2 | 21 | + | GH1 | 17 | - |
| intron-exon | DLG5 | 10 | - | COX3 | MT | + |
| intron-exon | AC245128.1 | | + | GH1 | 17 | - |
| intron-exon | ATP8A2 | 13 | + | FTL | 19 | + |
| exon-intron | RNA45SN1 | 21 | + | IDH3A | 15 | - |
| exon-exon | RNA45SN3 | 21 | + | GH1 | 17 | - |
| exon-exon | TAF15 | 17 | + | PARM1 | 4 | + |
| exon-exon | GH1 | 17 | - | CSH2 | 17 | - |
| exon-exon | RNA45SN2 | 21 | + | MCUR1 | 6 | - |
| exon-intron | INTU | | + | RNR1 | MT | + |
| exon-exon | RNA45SN1 | 21 | + | GH1 | 17 | - |
| exon-exon | RNA45SN2 | 21 | + | SRSF4 | 1 | - |
| intron-exon | PNPLA8 | | + | SLC25A4 | 4 | + |
| exon-intron | TPST1 | 7 | + | LOC105372859 | | + |
| exon-exon | TUBB3 | 16 | + | GNAS | 20 | + |
| exon-intron | RNA45SN1 | 21 | + | RNR2 | MT | + |
| exon-exon | RNA45SN2 | 21 | + | GH1 | 17 | - |
| exon-intron | PIGP | 21 | - | CEMIP | 15 | - |
| exon-exon | NOMO2 | 16 | - | LOC102723728 | 16 | - |
| exon-exon | COX1 | MT | + | ATP6V1G2-DDX39B | 6 | - |
| exon-exon | COX1 | MT | + | BCL2L1 | | - |
| exon-intron | ND4L | MT | + | ND4 | MT | + |
| exon-intron | PABPC1 | 8 | + | RNR1 | MT | - |
| intron-exon | RNR2 | MT | + | ND6 | MT | + |
| intron-exon | RPL4 | 15 | - | KRT222 | 17 | - |
| intron-exon | LIPE-AS1 | 19 | - | RTL8C | X | + |
| intron-exon | TMEM17 | | - | INTS3 | 1 | + |
| intron-exon | RN7SKP203 | | - | TUBB4B | 9 | + |
| exon-exon | MALAT1 | 11 | + | TRA2B | 3 | - |
| exon-intron | UBC | 12 | - | C2CD3 | 11 | + |
| exon-intron | SNHG32 | 6 | + | ESYT2 | 7 | - |
| exon-exon | BCL2 | 18 | - | HMGN1 | 21 | - |
| exon-intron | RNA45SN2 | 21 | + | FTH1P10 | 5 | - |
| exon-exon | MALAT1 | 11 | + | HNRNPUL1 | 19 | + |
| intron-exon | RNR2 | MT | + | ND5 | MT | + |
| intron-exon | SNHG6 | 8 | - | SET | 9 | + |
| exon-intron | CDC26P1 | 7 | - | AHCYL2 | 7 | - |
| intron-exon | SNHG6 | 8 | - | SKAP2 | 7 | - |
| exon-intron | BANF1P3 | | - | CAB39 | 2 | - |
| intron-exon | RNA28SP | 21 | + | RBFOX2 | 22 | - |
| exon-intron | SLC25A6 | Y | - | FAF2 | 5 | - |
| intron-exon | RPL13A | 19 | + | COX3 | MT | + |
| exon-exon | PDCD10 | 3 | - | ARHGAP15 | 2 | + |
| exon-intron | RNA45SN2 | 21 | + | SDCCAG8 | 1 | + |
| exon-intron | FAM126B | 2 | - | LINC00548 | | + |
| intron-exon | LOC112441445 | | + | ZNF764 | 16 | + |
| exon-intron | DCAF7 | 17 | + | FTH1 | 11 | - |
| exon-intron | LINC01436 | | + | MAPRE1 | 20 | + |
| exon-exon | NBR2 | 17 | + | ZNF706 | 8 | - |
| exon-exon | H4-16 | | - | LOC105369669 | | - |
| exon-intron | IGLL5 | 22 | - | IGF1R | 15 | + |
| exon-exon | LOC112268186 | 17 | - | NOC4L | 12 | + |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| exon-exon | ATP5ME | 4 | + | OS9 | 12 | - |
| exon-intron | IDH1 | 2 | + | MBOAT2 | 2 | + |
| exon-intron | LOC284412 | 19 | + | AC016590.1 | 19 | + |
| exon-intron | SIMC1 | 5 | - | NIFK-AS1 | 2 | - |
| exon-intron | RNF10 | 12 | - | CNGA3 | 2 | - |
| intron-exon | KAZN | 1 | - | LLGL2 | 17 | - |
| intron-exon | AC009093.10 | 16 | - | RRN3P2 | 16 | - |
| exon-exon | MRPS15 | 1 | + | RNA45SN3 | 21 | - |
| exon-exon | PRRC2C | 1 | - | ZC3H13 | 13 | + |
| exon-exon | MEF2C | 5 | + | GOLGA6A | 15 | + |
| intron-exon | PRC1 | 15 | - | RCCD1 | 15 | - |
| intron-exon | CACNB2 | 10 | + | PCGF2 | 17 | + |
| exon-exon | PNPLA2 | 11 | + | CRACR2B | 11 | + |
| exon-intron | ATP13A4 | 3 | - | ATP13A5 | 3 | - |
| exon-exon | PLIN3 | 19 | + | MAP4 | 3 | + |
| exon-intron | ZNF106 | 15 | + | RAC1 | 7 | - |
| intron-exon | SKIV2L | 6 | + | STK19 | 6 | + |
| exon-exon | RASA4 | 7 | + | RASA4DP | 7 | + |
| exon-exon | NDRG3 | 20 | + | ZNF562 | 19 | + |
| exon-intron | MUC13 | 3 | + | EGFR | 7 | - |
| exon-intron | CSGALNACT1 | 8 | + | USP14 | 18 | - |
| exon-intron | CCN2 | 6 | + | HIVEP2 | 6 | + |
| exon-exon | HNF4A | 20 | - | HNF4A | 20 | + |
| intron-exon | IPO4 | 14 | - | REC8 | 14 | - |
| exon-exon | LOC728825 | X | + | FAM120A | 9 | - |
| exon-exon | LOC107987142 | 9 | + | TMEM250 | 9 | - |
| exon-exon | NT5C2 | 10 | + | NT5C2 | 10 | - |
| exon-exon | METRNL | 17 | - | CIAO2B | 16 | - |
| intron-exon | AC004943.2 | 16 | + | CCHCR1 | 6 | - |
| exon-intron | FANCA | 16 | + | EHMT2 | 6 | - |
| exon-intron | USP28 | 11 | + | LOC105373449 | 2 | - |
| intron-exon | MAPT | 17 | + | DDX49 | 19 | - |
| exon-intron | VTI1B | 14 | - | GPHN | 14 | - |
| exon-exon | PPM1G | 2 | - | MPPE1 | 18 | + |
| exon-exon | DAPK2 | 15 | - | MAP2K5 | 15 | + |
| exon-exon | TCTN2 | 12 | - | TMEM62 | 15 | - |
| exon-intron | COL6A1 | 21 | - | GOLGA2P11 | 15 | - |
| intron-exon | TMEM45B | 11 | + | NFRKB | 11 | + |
| exon-exon | TBX2-AS1 | 17 | + | SEPTIN9 | 17 | - |
| exon-exon | FAM234A | 16 | - | YME1L1 | 10 | + |
| exon-intron | JUND | 19 | + | CNOT8 | 5 | - |
| intron-exon | ARL10 | 5 | - | TP53INP2 | 20 | - |
| exon-exon | NRSN2-AS1 | 20 | + | CD68 | 17 | - |
| exon-exon | RPS4X | X | + | SUPT5H | 19 | - |
| exon-exon | NOL3 | 16 | - | MICAL2 | 11 | - |
| exon-exon | ORAI2 | 7 | - | RNA45SN3 | 21 | - |
| exon-exon | KIAA1522 | 1 | + | YARS1 | 1 | + |
| intron-exon | CLEC16A | 16 | - | OTUB2 | 14 | + |
| intron-exon | SLC12A5-AS1 | 20 | - | RNA45SN2 | 21 | - |
| exon-exon | HSF1 | 8 | - | HSF1 | 8 | + |
| exon-exon | RITA1 | 12 | - | RNA45SN2 | 21 | - |
| exon-exon | MCL1 | 1 | + | MCL1 | 1 | - |
| exon-exon | C6orf62 | 6 | - | CLN5 | 13 | + |
| exon-exon | COL1A2 | 7 | - | COL1A2 | 7 | + |
| exon-exon | FTH1 | 11 | - | FAM162A | 3 | + |
| exon-exon | H3-3B | 17 | + | H3-3B | 17 | - |
| exon-exon | TPX2 | 20 | - | TPX2 | 20 | + |
| exon-exon | MYC | 8 | - | MYC | 8 | + |
| exon-exon | E2F3 | 6 | + | TIMP2 | 17 | - |
| exon-exon | NCOA4 | 10 | + | NCOA4 | 10 | - |
| exon-exon | SEPTIN2 | 2 | - | SEPTIN2 | 2 | + |
| exon-exon | HSD17B11 | 4 | + | HSD17B11 | 4 | - |
| exon-exon | RNA45SN2 | 21 | + | COL11A1 | 1 | - |
| exon-exon | EIF3L | 22 | - | EIF3LP2 | 10 | + |
| exon-intron | CDT1 | 16 | - | CATSPERB | 14 | + |
| exon-exon | QRICH2 | 17 | - | UBALD2 | 17 | - |
| intron-exon | GFM2 | 5 | - | HEXB | 5 | - |
| intron-exon | RNR2 | MT | - | POLR2J4 | 7 | + |
| exon-exon | HMGB1 | 13 | + | SLC7A8 | 14 | - |
| exon-exon | DECR1 | 8 | - | MFRP | 11 | - |
| exon-exon | ZSWIM1 | 20 | + | ZSWIM1 | 20 | - |
| exon-intron | EIF5 | 14 | - | ACO2 | 22 | - |
| intron-exon | NDUFB6 | 9 | + | NBEAP5 | 14 | - |
| exon-exon | HABP4 | 9 | - | CFL1 | 11 | + |
| exon-exon | KMT2E | 7 | - | NFKBID | 19 | + |
| exon-intron | STK11 | 19 | - | LOC112268284 | 21 | - |
| exon-exon | ARHGEF1 | 19 | - | TMC8 | 17 | - |
| intron-exon | PDLIM7 | 5 | + | PDLIM7 | 5 | - |
| intron-exon | MRPS9-AS1 | 2 | - | CD2AP | 6 | - |
| exon-exon | PPIAP59 | 19 | + | AGO2 | 8 | + |
| exon-exon | ARL8A | 1 | - | GPR37L1 | 1 | - |
| exon-intron | ABCB4 | 7 | - | ATP6 | MT | + |
| exon-exon | LOXL3 | 2 | - | DDX19A | 16 | - |
| intron-exon | PDE8B | 5 | - | ZBED3-AS1 | 5 | - |
| exon-exon | EIF3CL | 16 | + | SLC25A1 | 22 | + |
| exon-intron | DSC2 | 18 | + | DSCAS | 18 | + |
| intron-exon | LOC105373208 | 1 | - | LOC101927787 | 1 | - |
| intron-exon | AC005699.1 | 4 | - | LOC107986178 | 4 | - |
| exon-exon | FERMT1 | 20 | + | RBBP7 | X | + |
| exon-intron | PEX14 | 1 | - | RAB35 | 12 | + |
| intron-exon | NACC2 | | + | RNA45SN1 | 21 | - |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| exon-exon | LRRC28 | 15 | - | RNA45SN3 | 21 | + |
| exon-exon | LOC260422 | 4 | + | AFF1-AS1 | 4 | + |
| exon-intron | LOC101929560 | 15 | + | AC016705.2 | 15 | + |
| exon-exon | GRN | 17 | - | TMEM54 | 1 | + |
| intron-exon | CYP2S1 | 19 | - | TPM3 | 1 | - |
| exon-exon | LOC112268296 | 22 | - | APOL2 | 22 | - |
| exon-intron | PDZD8 | 10 | - | CHRNB1 | 17 | + |
| exon-exon | RPN1 | 3 | + | RPN1 | 3 | - |
| exon-exon | CALD1 | 7 | - | CALD1 | 7 | + |
| exon-exon | BUD23 | 7 | - | BUD23 | 7 | + |
| exon-intron | FN1 | 2 | - | SCHLAP1 | 2 | + |
| exon-exon | NEK9 | 14 | + | NEK9 | 14 | - |
| exon-exon | LOC112268184 | 17 | - | NPEPPS | 17 | + |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | RNA45SN2 | 21 | + | NIBAN2 | 9 | - |
| exon-exon | FST | 5 | - | FST | 5 | + |
| exon-intron | HNRNPA1 | 12 | - | GAREM1 | 18 | - |
| intron-exon | LOC105373177 | X | + | RPS26P8 | 17 | + |
| intron-exon | AL645465.1 | 1 | + | ADSS2 | 1 | + |
| exon-intron | CTXND1 | 15 | + | TSPEAR | 21 | - |
| exon-exon | PRDX3 | 10 | + | ND2 | MT | + |
| exon-exon | RAB6A | 11 | - | LUC7L3 | 17 | + |
| exon-intron | OR7D4 | 19 | - | OR7E25P | 19 | - |
| intron-exon | LINC01260 | 20 | - | TTPAL | 20 | - |
| intron-exon | CARS2 | 13 | + | ANKRD10 | 13 | + |
| exon-exon | NISCH | 3 | - | NOLC1 | 10 | - |
| exon-intron | CLU | 8 | + | LOC105374301 | 3 | + |
| exon-exon | RNA45SN2 | 21 | - | SLC38A10 | 17 | + |
| exon-intron | CNNM2 | 10 | + | ZMAT5 | 22 | + |
| exon-intron | MIR202HG | 10 | + | RNF38 | 9 | + |
| intron-exon | CLTCL1 | 22 | + | LINC00665 | 19 | + |
| exon-intron | ALB | 4 | - | APP | 21 | + |
| exon-exon | PCSK2 | 20 | - | RNA45SN1 | 21 | - |
| intron-exon | CBWD5 | 9 | - | LOC105379251 | 9 | - |
| exon-intron | PTMA | 2 | - | PBX3 | 9 | - |
| exon-intron | RDH13 | 19 | - | AL356133.2 | 9 | - |
| exon-exon | IGFBP7 | 4 | - | POLR2B | 4 | - |
| exon-exon | LOC105371448 | 1 | + | GATAD2B | 1 | + |
| exon-intron | ND1 | MT | - | PEX7 | 6 | + |
| intron-exon | NEURL1B | 5 | + | ACTR3 | 2 | - |
| exon-exon | ENO1 | 1 | + | APP | 21 | + |
| exon-exon | RNA45SN3 | 21 | + | MARCHF2 | 19 | + |
| exon-exon | UCHL1 | 4 | - | YARS2 | 12 | - |
| exon-exon | PLPPR3 | 19 | - | PTBP1 | 19 | - |
| exon-exon | PDAP1 | 7 | - | ARPC1B | 7 | - |
| exon-intron | IGKC | 2 | + | IGK | 2 | + |
| exon-exon | ZFP36L2 | 2 | + | SLAIN2 | 4 | - |
| exon-exon | WDR46 | 6 | - | B3GALT4 | 6 | - |
| exon-intron | HNRNPU | 1 | + | C8orf34 | 8 | + |
| exon-intron | NOXA1 | 9 | - | GPHN | 14 | - |
| exon-exon | GRSF1 | 4 | + | COL3A1 | 2 | - |
| exon-intron | CCSAP | 1 | - | AL117350.1 | 1 | - |
| exon-intron | CENPP | 9 | + | AC008083.1 | 12 | - |
| intron-exon | ALDH1L1-AS1 | 3 | + | ALDH1L1 | 3 | + |
| exon-exon | BPHL | 6 | - | MFSD9 | 2 | + |
| exon-intron | CORIN | 4 | + | LOC101927179 | 4 | + |
| exon-intron | COL6A3 | 2 | + | EBF1 | 5 | - |
| exon-exon | DNPEP | 2 | + | RNA45SN1 | 21 | + |
| exon-exon | PIP4K2B | 17 | - | APBA3 | 19 | - |
| exon-exon | LIMD2 | 17 | - | MAP3K3 | 17 | - |
| exon-exon | IFT122 | 3 | + | IFT122 | 3 | - |
| exon-intron | UPF3A | 13 | - | CCDC144CP | 17 | + |
| exon-exon | H3P6 | 2 | - | H3P6 | 2 | + |
| exon-exon | EIF3K | 19 | - | PGK1 | X | - |
| exon-exon | GNB1 | 1 | + | COX1 | MT | - |
| exon-exon | SLC25A25 | 9 | + | SPINK5 | 5 | + |
| exon-intron | CHI3L1 | 1 | + | OTUD7A | 15 | + |
| intron-exon | IGH | 14 | + | IGHA2 | 14 | + |
| exon-exon | RPL21 | 13 | - | AHNAK | 11 | + |
| exon-intron | MIR202HG | 10 | + | XKR9 | 8 | - |
| exon-exon | EMC3 | 3 | + | THBS1 | 15 | - |
| exon-intron | EFCAB5 | 17 | + | NSRP1 | 17 | + |
| exon-exon | NOP53 | 19 | - | ZNF865 | 19 | - |
| exon-intron | LOC101928924 | 5 | + | OCLN | 5 | + |
| intron-exon | GGACT | 13 | + | NFIB | 9 | + |
| intron-exon | LOC107987267 | 19 | + | ATP5F1C | 10 | + |
| intron-exon | WDR41 | 5 | - | PDE8B | 5 | - |
| intron-exon | LOC101928119 | 9 | - | PDPN | 1 | - |
| exon-exon | UBE2L6 | 11 | + | UBE2L6 | 11 | - |
| exon-exon | B2M | 15 | - | B2M | 15 | + |
| exon-exon | PKD1 | 16 | + | LOC105371049 | 16 | + |
| exon-exon | IGFLR1 | 19 | - | KMT2B | 19 | - |
| exon-exon | PDZD9 | 16 | - | UQCRC2 | 16 | + |
| exon-exon | HPCAL1 | 2 | - | HPCAL1 | 2 | + |
| intron-exon | KAT14 | 20 | - | ANKRD11 | 16 | + |
| exon-exon | HOXD1 | 2 | - | SENP6 | 6 | + |
| exon-exon | CENPF | 1 | - | CENPF | 1 | + |
| intron-exon | AP000894.2 | 18 | + | ADCYAP1 | 18 | + |
| intron-exon | CEBPZ | 2 | - | ITGB8 | 7 | - |
| exon-exon | FBXL16 | 16 | - | WDR24 | 16 | - |
| intron-exon | LINC00683 | 18 | - | LINC00908 | 18 | - |
| exon-exon | RPS29 | 14 | + | UBA52 | 19 | + |
| exon-intron | LINC00677 | 14 | + | TNFAIP2 | 14 | + |
| exon-exon | NACA | 12 | + | WNK1 | 12 | - |
| exon-exon | RPL15 | 3 | - | RPL15 | 3 | + |
| exon-exon | TSC22D3 | X | + | TSC22D3 | X | - |
| intron-exon | LOC112268138 | 14 | + | IGHG1 | 14 | + |
| intron-exon | LINC01949 | 5 | + | LOC105379065 | 5 | + |
| intron-exon | PRDX6 | 1 | + | LOC101928673 | 1 | + |
| exon-intron | SSB | 2 | - | CSMD1 | 8 | - |
| intron-exon | RPL26 | 17 | - | KRBA2 | 17 | - |
| exon-exon | PKD1 | 16 | + | LOC105371049 | 16 | + |
| intron-exon | LOC105377447 | 4 | + | SLC7A11-AS1 | 4 | + |
| intron-exon | RUVBL1 | 3 | - | CCT5 | 5 | + |
| exon-exon | ATE1 | 10 | + | ATE1 | 10 | - |
| exon-intron | HLA-DRA | 6 | - | ACYP2 | 2 | - |
| exon-intron | PNISR | 6 | + | ENTPD1-AS1 | 10 | + |
| exon-intron | LOC102724156 | 9 | + | CRIM1 | 2 | - |
| intron-exon | AL391645.1 | 1 | - | LOC105371597 | 17 | - |
| exon-exon | RNA45SN1 | 21 | + | MED20 | 6 | - |
| exon-exon | GAPDH | 12 | - | GAPDH | 12 | + |
| exon-intron | TSC22D3 | X | + | TM9SF3 | 10 | + |
| exon-intron | CDK4 | 12 | - | AC007556.1 | 2 | - |
| exon-exon | ANGPT1 | 8 | + | HIP1 | 7 | + |
| exon-intron | RPS24 | 10 | - | RPS24 | 10 | + |
| exon-exon | TM4SF1 | 3 | + | TM4SF1 | 3 | - |
| exon-exon | EIF3F | 11 | - | DYNLL2 | 17 | + |
| exon-exon | CDC42EP1 | 22 | - | CD63 | 12 | - |
| exon-exon | DCAF16 | 4 | + | GORAB | 1 | + |
| exon-exon | ENTR1 | 9 | + | ASIC1 | 12 | - |
| exon-exon | TCF20 | 22 | + | TCF20 | 22 | - |
| exon-exon | ND2 | MT | - | GRAMD1B | 11 | - |
| exon-intron | MAP2K7 | 19 | - | RNA18SP5 | 21 | - |
| intron-exon | SART3 | 12 | - | FICD | 12 | - |
| exon-intron | LSM4 | 19 | + | ERGIC1 | 5 | - |
| exon-intron | BOLA3 | 2 | + | USP22 | 17 | + |
| exon-exon | CAVIN2 | 2 | + | CAVIN2-AS1 | 2 | + |
| exon-exon | ODF3B | 22 | + | ZNF609 | 15 | - |
| exon-intron | LOC105374854 | 2 | + | IGK | 2 | + |
| intron-exon | BAZ1B | 7 | + | PDK1 | 2 | - |
| exon-exon | DCANP1 | 5 | + | TIFAB | 5 | + |
| exon-exon | FKBP7 | 2 | - | PLEKHA3 | 2 | + |
| exon-intron | CBX8 | 17 | + | RNA18SP5 | 21 | - |
| exon-intron | TIMM10B | 11 | - | GPHN | 14 | + |
| exon-exon | LOC100506548 | 5 | + | FCGR3A | 1 | + |
| exon-intron | TMEM177 | 2 | - | FAM153B | 5 | - |
| exon-intron | LOC107985443 | 1 | + | RP4-543J13.1 | 1 | + |
| exon-exon | SHMT1 | 17 | - | SMCR8 | 17 | - |
| intron-exon | LOC105371502 | 17 | - | KIF1C | 17 | + |
| exon-intron | SDHAP2 | 3 | + | MUC20 | 3 | + |
| intron-exon | TAOK1 | 17 | - | IDS | X | + |
| exon-exon | LINC00159 | 21 | + | MIS18A | 21 | + |
| exon-exon | RNA45SN2 | 21 | - | MAGED4B | X | - |
| exon-exon | CCL16 | 17 | + | HSD17B4 | 5 | - |
| exon-exon | ND6 | MT | - | NEAT1 | 11 | - |
| exon-intron | EPHA1 | 7 | - | PXN-AS1 | 12 | + |
| intron-exon | A2ML1-AS1 | 12 | + | FURIN | 15 | - |
| exon-intron | NAP1L1 | 12 | + | PACS1 | 11 | - |
| exon-exon | EIF2AK2 | 2 | + | PRXL2A | 10 | - |
| exon-intron | HMGB1 | 13 | + | LOC105371131 | 16 | - |
| exon-exon | PTPRZ1 | 7 | - | PTPRZ1 | 7 | + |
| exon-exon | RAB31 | 18 | - | PSMA4 | 15 | + |
| exon-exon | PCDHGA8 | 5 | - | EXOC3 | 5 | + |
| exon-intron | ALDOC | 17 | + | WDR47 | 1 | - |
| exon-exon | RPL15 | 3 | - | RPL15 | 3 | + |
| exon-exon | MYO6 | 6 | - | MYO6 | 6 | + |
| exon-exon | FBXO6 | 1 | - | PRKAA1 | 5 | + |
| exon-exon | SPDYE8 | 7 | - | PMS2P7 | 7 | - |
| exon-exon | BAMBI | 10 | - | BAMBI | 10 | + |
| exon-exon | METTL2A | 17 | - | PNO1 | 2 | - |
| intron-exon | LRRC7-AS1 | 1 | - | PDLIM5 | 4 | - |
| exon-intron | TUBB2A | 6 | + | TUBB2B | 6 | + |
| intron-exon | AC131392.1 | 5 | + | GUSBP13 | 5 | + |
| exon-exon | MIF-AS1 | 22 | + | MIF | 22 | + |
| exon-exon | SGSM2 | 17 | - | GAD1 | 2 | - |
| intron-exon | AC105052.4 | 7 | + | POLR2J2 | 7 | + |
| exon-intron | ARL4D | 17 | + | TSN | 2 | - |
| exon-exon | PRDM5 | 4 | + | FUNDC2 | X | + |
| exon-intron | YWHAH | 22 | - | SDC3 | 1 | - |
| exon-exon | ARFGAP2 | 11 | + | HNRNPM | 19 | + |
| exon-exon | DNAJC15 | 13 | - | MYC | 8 | - |
| exon-intron | RCE1 | 11 | + | TARDBP | 1 | - |
| exon-intron | OGDH | 7 | - | LYPLAL1-DT | 1 | - |
| intron-exon | MAML3 | 4 | - | MIDEAS | 14 | + |
| intron-exon | ART3 | 4 | + | GLUL | 1 | - |
| exon-intron | KCNAB1 | 3 | + | MACF1 | 1 | - |
| intron-exon | DCBLD1 | 6 | + | GOPC | 6 | - |
| exon-intron | IGKC | 2 | + | IGK | 2 | + |
| exon-exon | NDUFA10 | 2 | + | SLAIN2 | 4 | - |
| exon-intron | ZHX2 | 8 | - | GARS1-DT | 7 | + |
| exon-exon | MXRA8 | 1 | + | SH3BGRL3 | 1 | + |
| exon-intron | TMSB4X | X | - | MOSMO | 16 | + |
| exon-exon | NUPR1 | 16 | + | USP20 | 9 | - |
| intron-exon | CSTB | 21 | + | RRP1 | 21 | + |
| exon-exon | CYSRT1 | 9 | - | MRTFB | 16 | - |
| exon-exon | NAMPT | 7 | + | ULK2 | 17 | - |
| exon-exon | CLTB | 5 | + | PSMF1 | 20 | - |
| exon-exon | CD74 | 5 | + | RNA45SN1 | 21 | - |
| exon-exon | ZBTB7A | 19 | + | ATG14 | 14 | + |
| exon-intron | RPL8 | 8 | + | ALDH1L2 | 12 | + |
| exon-intron | RPL5P34 | 22 | + | MTLN | 2 | - |
| exon-exon | TIGD7 | 16 | - | ZNF263 | 16 | - |
| intron-exon | AC009902.2 | 8 | + | FABP5 | 8 | + |
| exon-intron | RPL26 | 17 | + | CYP4Z1 | 1 | - |
| intron-exon | SPAG5-AS1 | 17 | + | CLN3 | 16 | - |
| exon-exon | ND2 | MT | - | EIF4G1 | 3 | - |
| exon-exon | ATN1 | 12 | - | ATN1 | 12 | + |
| exon-exon | ACTR3 | 2 | + | IGHG1 | 14 | - |
| exon-exon | YKT6 | 7 | + | YKT6 | 7 | - |
| exon-exon | MAP2K2 | 19 | + | ATP5PO | 21 | + |
| exon-exon | ATP6 | MT | - | ND5 | MT | - |
| exon-intron | SP1 | 12 | + | QRICH1 | 3 | - |
| exon-exon | FAM110A | 20 | - | PABPC1P2 | 2 | + |
| exon-intron | SNX30 | 9 | + | EXOC4 | 7 | + |
| exon-exon | XPNPEP3 | 22 | - | XPNPEP3 | 22 | + |
| exon-exon | SSH2 | 17 | + | EFCAB5 | 17 | + |
| intron-exon | LOC105376208 | 9 | - | SAAL1 | 11 | - |
| intron-exon | GGT1 | 22 | + | CARS2 | 13 | - |
| intron-exon | AC079772.1 | 4 | - | LOC105374391 | 4 | - |
| intron-exon | LOC105369698 | 12 | - | HNRNPA2B1 | 7 | + |
| exon-exon | PRR11 | 17 | - | PPIL2 | 22 | - |
| exon-exon | OR6A2 | 11 | + | LOC107984019 | 11 | + |
| exon-intron | CCSER1 | 4 | - | LHFPL2 | 5 | + |
| intron-exon | CHIA | 1 | + | LOC105378903 | 1 | + |
| exon-intron | ANKHD1-EIF4EBP3 | 5 | - | IL1RAPL2 | X | - |
| intron-exon | VPS13B-DT | 8 | - | LOC107986872 | 8 | - |
| exon-exon | HLA-DRA | 6 | - | HLA-DRA | 6 | + |
| exon-exon | ATP8 | MT | - | COX1 | MT | - |
| intron-exon | IGH | 14 | + | IGHA1 | 14 | + |
| exon-exon | DPP9 | 19 | + | ARHGAP1 | 11 | + |
| exon-exon | HLA-DRA | 6 | - | HLA-DRA | 6 | + |
| intron-exon | LOC112268138 | 14 | + | IGHG1 | 14 | + |
| exon-exon | POLDIP2 | 17 | - | TNFAIP1 | 17 | - |
| exon-exon | NBPF9 | 1 | + | NBPF19 | 1 | + |
| exon-exon | NACC1 | 19 | - | HMBOX1 | 8 | - |
| exon-exon | LOC107985840 | 2 | + | GAA | 17 | + |
| exon-intron | BBOF1 | 14 | + | VDAC3 | 8 | - |
| exon-intron | ZNF821 | 16 | + | GPC4 | X | + |
| exon-exon | PCK1 | 20 | - | DYNLL2 | 17 | - |
| exon-intron | SHANK3 | 22 | - | LOC102724881 | 8 | - |
| exon-exon | SEH1L | 18 | - | CFL1 | 11 | - |
| intron-exon | LINC00159 | 21 | + | MIS18A | 21 | + |
| exon-intron | NIP7 | 16 | - | FZD3 | 8 | - |
| exon-intron | LOC105377428 | 4 | + | RP11-789C2.1 | 4 | + |
| exon-exon | CCNI | 4 | + | SERINC5 | 5 | + |
| intron-exon | ANO7 | 2 | + | SNX33 | 15 | - |
| exon-exon | CYP46A1 | 14 | - | VPS26B | 11 | - |
| exon-exon | NXF1 | 11 | + | ZNF609 | 15 | - |
| exon-exon | ILKAP | 2 | + | NISCH | 3 | - |
| intron-exon | CA5BP1-CA5B | X | + | ARHGEF16 | 1 | + |
| intron-exon | SLC35F2 | 11 | - | FBLN7 | 2 | + |
| exon-intron | HOXB3 | 17 | - | HOXB-AS1 | 17 | - |
| exon-exon | ND2 | MT | - | NEAT1 | 11 | - |
| intron-exon | ARRB1 | 11 | + | RNA45SN1 | 21 | - |
| exon-exon | NCOA1 | 2 | - | NCOA1 | 2 | + |
| exon-exon | ABCD1 | X | - | RNA45SN1 | 21 | - |
| exon-intron | CD248 | 11 | + | LOC100288866 | 17 | - |
| exon-exon | B2M | 15 | - | B2M | 15 | + |
| intron-exon | LOC112268276 | 1 | + | ZBED3 | 5 | + |
| intron-exon | OXR1 | 8 | + | TBC1D4 | 13 | - |
| intron-exon | C5orf66 | 5 | + | LRP6 | 12 | + |
| exon-intron | TPRG1L | 1 | - | ZNF320 | 19 | + |
| exon-exon | SRRM1 | 1 | - | DDX17 | 22 | + |
| exon-intron | MMP24-AS1-EDEM2 | 20 | + | MMP24-AS1-EDEM2 | 20 | - |
| exon-exon | EIF1B | 3 | - | EIF1B | 3 | + |
| intron-exon | WIF1 | 12 | - | ADSS1 | 14 | - |
| exon-intron | PRPF3 | 1 | - | CUL7 | 6 | + |
| exon-intron | HSP90AA1 | 14 | + | LOC105374145 | 3 | - |
| exon-exon | RASA4B | 7 | + | RNA45SN1 | 21 | - |
| exon-exon | RAB29 | 1 | + | RAB29 | 1 | - |
| exon-exon | GSTP1 | 11 | - | LAMA5 | 20 | + |
| exon-intron | PLEKHH3 | 17 | + | AC009093.8 | 16 | + |
| intron-exon | LRRC57 | 15 | - | SNAP23 | 15 | - |
| intron-exon | AP001062.2 | 21 | - | CFAP410 | 21 | - |
| intron-exon | POLG2 | 17 | - | AARS1 | 16 | - |
| exon-exon | GSK3A | 19 | + | PHKA1 | X | + |
| exon-intron | ZNF714 | 19 | - | ZNF430 | 19 | - |
| exon-exon | PPP1R14B | 11 | - | RNA45SN1 | 21 | - |
| intron-exon | PATL1 | 11 | - | LOC101927226 | 11 | - |
| exon-exon | SEC22B | 1 | + | MARK2 | 11 | - |
| intron-exon | CMPK1 | 1 | + | ESPL1 | 12 | - |
| exon-intron | TRIM7 | 5 | - | AC008443.5 | 5 | - |
| exon-exon | DAG1 | 3 | - | SLC35F2 | 11 | + |
| exon-intron | OBSL1 | 2 | + | CCDC25 | 8 | + |
| exon-intron | SELENON | 1 | + | AL020996.2 | 1 | + |
| intron-exon | CDC26 | 9 | - | MAP4K3-DT | 2 | - |
| exon-intron | ST3GAL4 | 11 | - | DIAPH2 | X | - |
| exon-exon | SUMF1 | 3 | + | PRPF38B | 1 | - |
| exon-intron | ARSB | 5 | + | DENND2A | 7 | + |
| exon-exon | GRIN1 | 9 | - | SNRNP70 | 19 | - |
| intron-exon | AL391883.1 | 1 | - | RNF186 | 1 | - |
| exon-exon | CCDC117 | 22 | + | CCDC117 | 22 | - |
| exon-intron | RNA45SN2 | 21 | + | LOC112268284 | 21 | - |
| exon-intron | KRT6A | 12 | + | RNR2 | MT | - |
| exon-exon | RPL10 | X | - | RPL10 | X | + |
| exon-exon | TGFBI | 5 | + | ZYX | 7 | + |
| exon-exon | ANXA2 | 15 | - | XPO6 | 16 | - |
| exon-intron | FTLP2 | X | + | SFPQ | 1 | - |
| exon-exon | EEF1B2 | 2 | + | ROBO1 | 3 | - |
| exon-exon | HNRNPK | 9 | - | SPARC | 5 | - |
| exon-exon | MAF1 | 8 | - | SURF4 | 9 | + |
| exon-exon | FUS | 16 | - | KLHL36 | 16 | - |
| exon-exon | RAPGEF1 | 9 | + | COL1A1 | 17 | + |
| exon-exon | RNA45SN1 | 21 | - | SERPINE2 | 2 | + |
| exon-intron | TRABD | 22 | + | AL022328.4 | 22 | + |
| exon-exon | CLCNKB | 1 | - | CLCNKA | 1 | - |
| intron-exon | LOC102724916 | 4 | - | MRPL1 | 4 | - |
| exon-exon | PLPPR2 | 19 | - | COX1 | MT | - |
| exon-intron | LOC105379508 | | - | FP671120.1 | | - |
| exon-exon | MYBL2 | 20 | - | MYBL2 | 20 | + |
| exon-exon | RPL37A | 2 | - | CBX6 | 22 | + |
| exon-exon | CHMP7 | 8 | + | CHMP7 | 8 | - |
| exon-exon | GAPDH | 12 | + | GAPDH | 12 | - |
| exon-exon | RANBP1 | 22 | + | RANBP1 | 22 | - |
| intron-exon | PLEKHA5 | 12 | + | AHSA1 | 14 | - |
| exon-exon | ATF5 | 19 | - | TMEM189-UBE2V1 | 20 | - |
| exon-exon | NDUFS6 | 5 | + | HMGN2 | 1 | + |
| intron-exon | AC073928.2 | 2 | - | PSMG3 | 7 | - |
| intron-exon | MICAL3 | 22 | - | GRWD1 | 19 | - |
| exon-exon | CDK4 | 12 | - | IL1R1 | 2 | - |
| exon-exon | TGFA | 2 | + | TGFA | 2 | - |
| exon-intron | RPL32 | 3 | + | YAP1 | 11 | - |
| exon-exon | CLU | 8 | + | LOC101928307 | 6 | + |
| exon-exon | RPL14 | 3 | - | NCOA3 | 20 | - |
| exon-exon | VWA7 | 6 | - | MSH5-SAPCD1 | 6 | - |
| exon-exon | LOC105372426 | 19 | - | DCP1B | 12 | + |
| intron-exon | CYB561A3 | 11 | + | LRRC58 | 3 | + |
| exon-exon | S100A6 | 1 | + | EXT2 | 11 | - |
| exon-exon | TMEM208 | 16 | - | PLOD1 | 1 | - |
| exon-exon | GSTP1 | 11 | - | FAM53B | 10 | + |
| exon-exon | CDK2AP2 | 11 | + | GPAT4 | 8 | - |
| exon-exon | P3H3 | 12 | - | INS-IGF2 | 11 | + |
| exon-intron | FOXP2 | 7 | - | CNTNAP3B | 9 | - |
| exon-intron | TUFT1 | 1 | - | TRIM39-RPP21 | 6 | - |
| intron-exon | KIF9-AS1 | 3 | - | CD24 | 6 | + |
| exon-intron | PTMS | 12 | + | FAM107B | 10 | + |
| exon-exon | KRT4 | 12 | + | KRT4 | 12 | - |
| exon-exon | S100A8 | 1 | + | S100A8 | 1 | - |
| exon-exon | KRT13 | 17 | + | KRT13 | 17 | - |
| intron-exon | CHCHD3 | 7 | + | EEF1G | 11 | - |
| exon-exon | GBP6 | 1 | - | GBP6 | 1 | + |
| intron-exon | RNR2 | MT | + | MTRNR2L1 | 17 | - |
| exon-exon | CSTB | 21 | + | CSTB | 21 | - |
| exon-exon | S100A2 | 1 | + | S100A2 | 1 | - |
| exon-exon | YAP1 | 11 | + | YAP1 | 11 | - |
| exon-exon | CSTA | 3 | - | CSTA | 3 | + |
| exon-exon | PCNP | 3 | + | RPS18P9 | 6 | + |
| exon-exon | S100A8 | 1 | + | S100A8 | 1 | - |
| exon-intron | SIRT4 | 12 | + | RNR2 | MT | - |
| intron-exon | FBXO42 | 1 | + | RNU1-1 | 1 | + |
| exon-exon | PHB2 | 12 | + | PHB2 | 12 | - |
| exon-exon | UBE4A | 11 | + | ATP5MG | 11 | + |
| intron-exon | LIMCH1 | 4 | - | ILF3 | 19 | - |
| exon-intron | LOC105373230 | 1 | - | AL359764.2 | 1 | - |
| intron-exon | SFTA3 | 14 | - | SEMA3F-AS1 | 3 | - |
| exon-exon | TMEM176B | 7 | + | MRPS18B | 6 | + |
| exon-exon | SELENOP | 5 | - | CCDC152 | 5 | - |
| intron-exon | LOC112268138 | 14 | + | IGHG1 | 14 | + |
| exon-exon | EGR3 | 8 | + | PLAA | 9 | + |
| exon-exon | UBA52 | 19 | - | UBA52 | 19 | + |
| intron-exon | SDR39U1 | 14 | - | KHNYN | 14 | + |
| exon-exon | RPL30 | 8 | + | RPL30 | 8 | - |
| exon-exon | IGHG1 | 14 | - | IGHG1 | 14 | + |
| exon-intron | LOC105373230 | 1 | - | AL359764.2 | 1 | - |
| exon-intron | PECAM1 | 17 | + | BCKDHB | 6 | - |
| intron-exon | RIN2 | 20 | - | ZNF479 | 7 | + |
| exon-exon | RPL34 | 4 | - | LPIN2 | 18 | + |
| exon-intron | RPS24P8 | 3 | + | FUT10 | 8 | + |
| exon-exon | GEM | 8 | + | RNA45SN1 | 21 | - |
| exon-exon | PPP6R2 | 22 | + | SBF1 | 22 | + |
| exon-intron | ACTB | 7 | + | SMG1P2 | 16 | + |
| exon-exon | CLDN4 | 7 | - | NEAT1 | 11 | - |
| exon-intron | FCGRT | 19 | + | PSEN1 | 14 | - |
| exon-exon | ENKD1 | 16 | + | MICU1 | 10 | + |
| exon-exon | ATP13A1 | 19 | + | SYNCRIP | 6 | + |
| exon-exon | NAA38 | 17 | + | YLPM1 | 14 | - |
| exon-intron | LOC101929356 | 2 | + | ITGA9 | 3 | - |
| exon-intron | ACTB | 7 | + | ITGA1 | 5 | - |
| exon-intron | CD19 | 16 | - | EMC8 | 16 | + |
| exon-exon | LGALS3BP | 17 | + | LGALS3BP | 17 | - |
| exon-exon | RPL18 | 19 | + | TMED1 | 19 | + |
| exon-intron | AGL | 1 | - | NBPF25P | 1 | - |
| exon-exon | CAPG | 2 | + | WDTC1 | 1 | - |
| exon-exon | PTPN14 | 1 | - | PTPN14 | 1 | + |
| intron-exon | BRI3 | 7 | + | BAIAP2L1 | 7 | - |
| exon-intron | HNRNPA1P4 | 8 | - | SNX16 | 8 | - |
| exon-exon | TMEM205 | 19 | + | TMEM205 | 19 | - |
| exon-exon | AFDN | 6 | + | AFDN | 6 | - |
| intron-exon | GAS5 | 1 | + | GAS5 | 1 | - |
| intron-exon | IQCG | 3 | - | RPL35A | 3 | + |
| exon-exon | RPL13AP5 | 10 | - | RPL13AP5 | 10 | + |
| exon-exon | RPL12 | 9 | + | RPL12 | 9 | - |
| exon-intron | MGRN1 | 16 | + | TASP1 | 20 | + |
| intron-exon | BLOC1S5-TXNDC5 | 6 | + | PXK | 3 | - |
| intron-exon | SNX14 | 6 | - | NT5E | 6 | - |
| intron-exon | ADGRG1 | 16 | + | CES4A | 16 | - |
| intron-exon | LINC01547 | 21 | - | SCAF1 | 19 | + |
| exon-exon | PKLR | 1 | - | HCN3 | 1 | - |
| exon-intron | TNFSF10 | 3 | + | KIFC3 | 16 | + |
| exon-intron | OR7E106P | 14 | - | AL079307.2 | 14 | - |
| exon-exon | MRE11 | 11 | + | ZNF385A | 12 | - |
| exon-exon | NUP50P1 | 14 | - | RPS4X | X | - |
| exon-exon | PPP2R5A | 1 | + | PPP2R5A | 1 | - |
| intron-exon | LOC105372236 | 19 | - | LOC107985303 | 19 | - |
| exon-intron | TMED8 | 14 | - | COL4A3 | 2 | + |
| exon-exon | CAPZB | 1 | + | CAPZB | 1 | - |
| exon-exon | ZNF292 | 6 | - | TRAM1 | 8 | + |
| intron-exon | TSPAN9 | 12 | + | RNA45SN1 | 21 | - |
| exon-exon | ACTBP11 | 1 | + | TCAF1 | 7 | + |
| exon-exon | HSF4 | 16 | - | FBXL8 | 16 | - |
| exon-exon | ND2 | MT | - | ARID5B | 10 | - |
| intron-exon | RPE65 | 1 | + | RPE65 | 1 | - |
| exon-intron | SYAP1 | X | - | CNGB3 | 8 | - |
| exon-intron | CFP | X | + | LINC01010 | 6 | + |
| exon-intron | SLC25A1 | 22 | + | RPL32P3 | 3 | + |
| exon-exon | RNA45SN2 | 21 | - | CUX1 | 7 | - |
| exon-intron | ROCR | 17 | + | LINC01152 | 17 | + |
| intron-exon | SEC23A | 14 | - | ND6 | MT | + |
| exon-exon | IL27RA | 19 | - | RLN3 | 19 | - |
| exon-exon | KNOP1 | 16 | + | KNOP1 | 16 | - |
| exon-exon | SMARCC2 | 12 | + | SOGA1 | 20 | + |
| exon-intron | CRYBB1 | 22 | + | CRYBA4 | 22 | + |
| exon-intron | AASS | 7 | + | GPHN | 14 | - |
| exon-exon | HDGFL3 | 15 | + | HDGFL3 | 15 | - |
| exon-intron | ACTN4 | 19 | - | TRERF1 | 6 | + |
| exon-exon | TCEANC2 | 1 | + | TCEANC2 | 1 | - |
| exon-exon | NDRG1 | 8 | + | LOC107984338 | 11 | - |
| exon-intron | KCNA1 | 12 | + | AC005906.2 | 12 | + |
| intron-exon | GRID1 | 10 | - | NFIC | 19 | + |
| intron-exon | AL359706.1 | 13 | + | IRF3 | 19 | + |
| exon-intron | FTLP3 | 20 | - | LOC100128253 | 12 | + |
| intron-exon | AL592429.2 | 6 | - | LOC107986651 | 6 | - |
| exon-exon | SOX12 | 20 | - | SLC18B1 | 6 | - |
| exon-exon | ITGAV | 2 | - | ITGAV | 2 | + |
| exon-exon | SPOP | 17 | + | TRNAU1AP | 1 | + |
| exon-exon | MTSS2 | 16 | + | SAMD9L | 7 | + |
| intron-exon | BACE1 | 11 | + | BACE1 | 11 | - |
| exon-exon | NUCKS1 | 1 | + | TNFRSF10C | 8 | - |
| exon-exon | ND2 | MT | - | ZSWIM3 | 20 | + |
| intron-exon | MAP3K12 | 12 | + | ND2 | MT | + |
| exon-exon | EP300-AS1 | 22 | + | TMF1 | 3 | + |
| intron-exon | GLYAT | 11 | + | RAB29 | 1 | + |
| intron-exon | AL031123.1 | 6 | + | LOC101928047 | 6 | + |
| exon-intron | RRAGA | 9 | - | SESN2 | 1 | - |
| exon-exon | L2HGDH | 14 | + | KIAA1191 | 5 | + |
| exon-exon | RPS19 | 19 | - | RPS4Y1 | Y | + |
| exon-exon | A1CF | 10 | + | A1CF | 10 | - |
| exon-intron | UAP1L1 | 9 | - | PLG | 6 | - |
| exon-intron | LACTB | 15 | - | GTF3C3 | 2 | + |
| exon-intron | ARHGAP12 | 10 | + | PARD3B | 2 | - |
| exon-intron | EIF3K | 19 | + | RNF185 | 22 | + |
| exon-exon | BCL2L2-PABPN1 | 14 | - | BCAM | 19 | - |
| exon-exon | MIF-AS1 | 22 | - | RNA45SN1 | 21 | - |
| exon-exon | CDK11A | 1 | + | FLII | 17 | + |
| exon-intron | FTL | 19 | - | KRT19 | 17 | + |
| exon-intron | DPP9 | 19 | + | LDB3 | 10 | - |
| exon-exon | DHRS7 | 14 | + | SPARCL1 | 4 | + |
| exon-exon | FUS | 16 | - | LTBP3 | 11 | + |
| exon-exon | PTGDS | 9 | - | MINDY1 | 1 | + |
| exon-intron | CIC | 19 | - | DCAF16 | 4 | + |
| exon-exon | CLEC3B | 3 | - | SH2B1 | 16 | - |
| intron-exon | IGL | 22 | + | IGLV2-23 | | + |
| intron-exon | IGH | 14 | + | IGHG2 | 14 | + |
| exon-intron | RHOA | 3 | + | LOC101928196 | 2 | + |
| exon-exon | MAPKAP1 | 9 | + | MCL1 | 1 | + |
| exon-exon | ARID5B | 10 | - | ARID5B | 10 | + |
| intron-exon | TTC3 | 21 | + | VPS26C | 21 | + |
| exon-exon | CARD11 | 7 | + | ITGA11 | 15 | + |
| exon-exon | DGKA | 12 | - | RGS22 | 8 | + |
| intron-exon | EGLN1 | 1 | - | SPRTN | 1 | - |
| exon-intron | SWAP70 | 11 | - | TMEM116 | 12 | - |
| exon-exon | BGN | X | - | FLNC | 7 | - |
| exon-intron | CDK10 | 16 | - | BIN2 | 12 | + |
| intron-exon | LOC107984035 | 9 | - | KAT2B | 3 | - |
| exon-exon | ARVCF | 22 | - | THBS3 | 1 | + |
| exon-exon | NPEPPSP1 | 17 | + | LOC102723608 | 17 | + |
| exon-exon | FAM13C | 10 | - | PHYHIPL | 10 | - |
| exon-intron | OSBPL9 | 1 | + | NRDC | 1 | + |
| intron-exon | LOC105375038 | 6 | + | KRT18 | 12 | - |
| exon-exon | CD34 | 1 | - | DBN1 | 5 | + |
| exon-exon | C4B | 6 | - | C4B | 6 | + |
| exon-intron | HSPG2 | 1 | + | MTATP6P1 | 1 | + |
| exon-exon | BMS1 | 10 | + | ND4 | MT | + |
| exon-exon | KIAA0895L | 16 | + | RNA45SN2 | 21 | + |
| exon-exon | PHLDB1 | 11 | + | TAGLN | 11 | + |
| intron-exon | SLC2A1 | 1 | - | ATN1 | 12 | - |
| intron-exon | TMEM165 | 4 | + | TUBA1B | 12 | + |
| exon-exon | LOC105378539 | 10 | + | HMGN2 | 1 | - |
| exon-exon | PTMA | 2 | - | ND5 | MT | - |
| exon-intron | ND6 | MT | - | HNRNPD | 4 | - |
| intron-exon | MTCO1P12 | 1 | - | CMBL | 5 | - |
| intron-exon | FP236383.3 | 21 | - | NOL7 | 6 | + |
| exon-intron | ND6 | MT | - | LOC105375949 | 9 | + |
| exon-exon | SPTBN1 | 2 | - | SPTBN1 | 2 | + |
| exon-intron | TMEM189-UBE2V1 | 20 | - | SRP9 | 1 | - |
| intron-exon | LOC105379005 | 5 | - | DBNL | 7 | + |
| exon-intron | CREB3L2 | 7 | + | TPD52 | 8 | - |
| exon-exon | GTPBP4 | 10 | + | NIN | 14 | - |
| exon-exon | TTC14 | 3 | - | ND1 | MT | + |
| intron-exon | CTD-2066L21.3 | 5 | + | ATP8 | MT | + |
| exon-exon | ARPC2 | 2 | + | TIMP2 | 17 | - |
| exon-exon | ATP6 | MT | + | ATP6 | MT | - |
| exon-intron | MSL1 | 17 | + | CFAP161 | 15 | - |
| exon-exon | JAG1 | 20 | - | JAG1 | 20 | + |
| exon-intron | MKI67 | 10 | + | SORBS1 | 10 | + |
| exon-intron | USP38 | 4 | + | HNRNPH1 | 5 | + |
| exon-exon | EWSR1 | 22 | + | NONO | X | + |
| exon-intron | IFRD1 | 7 | + | FUT8 | 14 | + |
| intron-exon | HNRNPA2B1 | 7 | + | ND4 | MT | + |
| exon-intron | CTNNB1 | 3 | - | AKAP11 | 13 | - |
| exon-exon | ND4 | MT | + | CYTB | MT | + |
| exon-exon | CYTB | MT | + | ND1 | MT | + |
| exon-exon | ERH | 14 | + | ND2 | MT | + |
| exon-exon | COX3 | MT | - | ATP6 | MT | - |
| exon-exon | SLC12A2 | 5 | - | PKP2 | 12 | + |
| intron-exon | DNAJC13 | 3 | + | NSF | 17 | - |
| intron-exon | IGH | 14 | - | IGHA1 | 14 | - |
| exon-exon | LRP10 | 14 | + | GRINA | 8 | - |
| exon-exon | RAB7A | 3 | + | PKP2 | 12 | - |
| exon-exon | EHMT2 | 6 | - | MSL2 | 3 | + |
| intron-exon | ZFP90 | 16 | - | EPM2AIP1 | 3 | - |
| exon-exon | ZBED5 | 11 | + | OCIAD1 | 4 | - |
| exon-exon | CEP250 | 20 | + | SREK1 | 5 | + |
| exon-intron | MBD6 | 12 | + | MYH14 | 19 | + |
| exon-exon | PTPN11 | 12 | + | PTPN11 | 12 | - |
| exon-exon | MRPS26 | 20 | - | SLC25A10 | 17 | + |
| intron-exon | NSUN2 | 5 | - | SOCS3 | 17 | + |
| exon-exon | FBXO34 | 14 | - | FBXO34 | 14 | + |
| exon-exon | RPL37A | 2 | + | ACOT9 | X | - |
| exon-exon | A2M | 12 | - | NPM1 | 5 | + |
| exon-exon | A2M | 12 | - | NPM1 | 5 | + |
| exon-exon | NCL | 2 | + | NFE2L1 | 17 | + |
| intron-exon | THOC2 | X | - | SEC62 | 3 | + |
| exon-exon | LOC112268272 | 1 | - | SEC22B3P | 1 | - |
| exon-exon | ANXA7 | 10 | - | ANXA7 | 10 | + |
| intron-exon | VPS41 | 7 | + | KMT2E | 7 | - |
| exon-intron | PRPF40A | 2 | + | CDK19 | 6 | - |
| exon-exon | MADD | 11 | - | MADD | 11 | + |
| exon-intron | EAF1 | 3 | - | MAP2K5 | 15 | + |
| exon-exon | TTC3 | 21 | + | UBR5 | 8 | - |
| exon-exon | RAD51 | 15 | + | CDCA5 | 11 | - |
| exon-exon | HNRNPA3 | 2 | + | C5orf15 | 5 | - |
| exon-exon | SLC25A3 | 12 | + | LOC105374953 | 6 | + |
| intron-exon | LIMK2 | 22 | - | ATG2A | 11 | + |
| exon-exon | RLIM | X | + | RLIM | X | - |
| exon-exon | TSPAN8 | 12 | + | TSPAN8 | 12 | - |
| exon-exon | NUDT3 | 6 | + | ND4 | MT | - |
| exon-exon | HNF4A | 20 | - | CCDC78 | 16 | + |
| exon-exon | SNX3 | 6 | + | ND6 | MT | - |
| exon-intron | KMT2E | 7 | - | RNR2 | MT | + |
| exon-intron | IL10RB | 21 | + | AFF1 | 4 | + |
| exon-exon | BAZ2A | 12 | + | GTF2H2B | 5 | + |
| exon-exon | CHD2 | 15 | - | TIMM23B-AGAP6 | 10 | - |
| exon-exon | SGPL1 | 10 | + | SGPL1 | 10 | - |
| exon-exon | ERBB3 | 12 | + | ERBB3 | 12 | - |
| exon-exon | BMS1P10 | 9 | - | BMS1P9 | 9 | - |
| exon-intron | ND5 | MT | + | BTBD9 | 6 | - |
| exon-intron | CCND2 | 12 | + | CHST7 | X | + |
| exon-intron | PIM2 | X | + | PIM2 | X | - |
| exon-intron | MYADM | 19 | - | LIN52 | 14 | + |
| exon-intron | RNA45SN2 | 21 | + | LOC112268284 | 21 | - |
| exon-intron | CD24 | 6 | - | MPG | 16 | - |
| exon-exon | FBXO46 | 19 | + | TALAM1 | 11 | - |
| exon-intron | FAM83A | 8 | + | WDR91 | 7 | + |
| exon-intron | LOC100652840 | 15 | - | CTD-3092A11.1 | 15 | - |
| exon-exon | KMT5A | 12 | - | KMT5A | 12 | + |
| exon-exon | TCEAL9 | X | + | RNF38 | 9 | - |
| exon-intron | C5orf15 | 5 | + | TPTE2P1 | 13 | + |
| exon-exon | OGT | X | + | OGT | X | - |
| intron-exon | TTBK2 | 15 | + | GOLIM4 | 3 | - |
| intron-exon | LOC100505498 | 2 | + | PGD | 1 | - |
| exon-exon | COX1 | MT | + | YBX3P1 | 16 | + |
| exon-exon | NONO | X | - | MYO1C | 17 | + |
| exon-exon | RPS17 | 15 | + | RNA45SN2 | 21 | + |
| exon-exon | HNRNPH1 | 5 | + | ND4 | MT | + |
| intron-exon | NAXD | 13 | - | STT3A | 11 | - |
| exon-exon | ACTR1A | 10 | - | SLC2A1 | 1 | - |
| intron-exon | KRT13 | 17 | + | ND4 | MT | - |
| exon-exon | EP300 | 22 | + | DAZAP2 | 12 | + |
| exon-exon | HLA-DPB1 | 6 | + | HLA-DPB1 | 6 | - |
| exon-exon | KRT6A | 12 | - | TUFT1 | 1 | + |
| exon-exon | IGHA1 | 14 | + | IGHA1 | 14 | - |
| exon-exon | APP | 21 | - | FLOT1 | 6 | + |
| exon-intron | COX3 | MT | - | MAML2 | 11 | + |
| intron-exon | USP22 | 17 | - | ABLIM1 | 10 | + |
| exon-intron | PDIA4 | 7 | - | FAR2P1 | 2 | - |
| exon-exon | PPHLN1 | 12 | - | LOC100132215 | 2 | - |
| exon-exon | ND4 | MT | + | OCRL | X | + |
| intron-exon | URAHP | 16 | - | LOC729218 | 4 | + |
| exon-exon | ATP6 | MT | - | HSPA4 | 5 | + |
| intron-exon | SREBF2 | 22 | - | FKBP15 | 9 | + |
| exon-exon | PRPF8 | 17 | - | PRPF8 | 17 | + |
| exon-exon | HIRIP3 | 16 | - | INO80E | 16 | + |
| exon-exon | LOC105372578 | 20 | - | COX1 | MT | - |
| exon-exon | SULT4A1 | 22 | + | COX2 | MT | - |
| intron-exon | C19orf18 | 19 | + | PRAF2 | X | - |
| intron-exon | RPL12 | 9 | - | CYTB | MT | - |
| exon-exon | FUS | 16 | - | AKAP10 | 17 | + |
| exon-exon | EIF4ENIF1 | 22 | + | EIF4ENIF1 | 22 | - |
| exon-intron | AAK1 | 2 | + | SOX2-OT | 3 | - |
| exon-exon | TRPC4AP | 20 | + | HELLS | 10 | + |
| intron-exon | KLHL42 | 12 | + | ARHGEF3 | 3 | - |
| intron-exon | SAV1 | 14 | + | CCNB1IP1 | 14 | + |
| exon-intron | ATP6 | MT | - | ANO5 | 11 | + |
| exon-intron | SESN3 | 11 | - | SCYL3 | 1 | - |
| exon-intron | PDCD4 | 10 | + | LOC105373225 | 1 | - |
| exon-intron | CTTN | 11 | + | KLRG2 | 7 | - |
| exon-exon | LOC646471 | 1 | - | NEAT1 | 11 | + |
| intron-exon | NOL10 | 2 | + | AHCTF1 | 1 | - |
| intron-exon | FOCAD | 9 | - | MALAT1 | 11 | + |
| exon-intron | PFKM | 12 | - | MAP2K1 | 15 | + |
| exon-intron | PKD1P5-LOC105376752 | 16 | - | NPIPA7 | 16 | + |
| exon-intron | NPIPB15 | 16 | + | C2 | 6 | + |
| exon-intron | SP3 | 2 | - | TRPM3 | 9 | - |
| exon-intron | IRF2 | 4 | - | RAB22A | 20 | + |
| intron-exon | SSBP2 | 5 | + | SACM1L | 3 | + |
| exon-exon | MFAP1 | 15 | - | HYPK | 15 | - |
| exon-intron | COPS7B | 2 | - | MBNL2 | 13 | - |
| exon-exon | DERL1 | 8 | + | KLF15 | 3 | - |
| exon-intron | SMCO4 | 11 | + | DNAJC3 | 13 | - |
| intron-exon | RASA4DP | 7 | - | CYTB | MT | + |
| intron-exon | ASPH | 8 | + | LMBR1 | 7 | - |
| exon-exon | IGKC | 2 | - | ND5 | MT | + |
| exon-exon | ITGB4 | 17 | + | PLSCR1 | 3 | + |
| exon-exon | BRD7 | 16 | + | BRD7P2 | 3 | + |
| exon-exon | RCN1 | 11 | - | RCN1 | 11 | + |
| intron-exon | PHYKPL | 5 | + | GPI | 19 | + |
| exon-exon | DDIT3 | 12 | - | DDIT3 | 12 | + |
| exon-exon | RNF216P1 | 7 | + | RNF216 | 7 | + |
| exon-exon | GTF2F1 | 19 | - | S100A16 | 1 | - |
| exon-intron | HNRNPH1 | 5 | + | LPP | 3 | + |
| exon-exon | LIPA | 10 | - | ELK4 | 1 | + |
| intron-exon | ZNF790 | 19 | - | ATP6 | MT | + |
| exon-intron | SEPHS2 | 16 | - | SLX1A-SULT1A3 | 16 | - |
| exon-exon | GBA | 1 | - | ND1 | MT | + |
| exon-exon | ND2 | MT | - | MDFI | 6 | - |
| exon-intron | UQCR10 | 22 | - | PXN | 12 | + |
| exon-intron | KCNE4 | 2 | + | PKP4-AS1 | 2 | - |
| exon-exon | ERBB2 | 17 | + | RABGAP1 | 9 | + |
| exon-intron | MYO19 | 17 | - | WTAP | 6 | + |
| exon-exon | MANBA | 4 | - | ND2 | MT | - |
| exon-intron | MAT2B | 5 | - | DLEU2 | 13 | + |
| exon-exon | SMN1 | 5 | - | ND4 | MT | - |
| intron-exon | CEBPZOS | 2 | + | ECD | 10 | + |
| intron-exon | PLD3 | 19 | + | EIF3I | 1 | - |
| exon-exon | EIF3H | 8 | - | EIF3H | 8 | + |
| intron-exon | CHM | X | - | EDEM1 | 3 | - |
| intron-exon | UHRF1BP1L | 12 | + | PRPF38B | 1 | - |
| exon-intron | ELK4 | 1 | - | DNAJC5 | 20 | + |
| exon-exon | TALAM1 | 11 | - | NEAT1 | 11 | - |
| exon-exon | SRI | 7 | + | ZNF641 | 12 | - |
| exon-exon | PRPF19 | 11 | + | PRPF19 | 11 | - |
| intron-exon | KLRG2 | 7 | + | MTG2 | 20 | - |
| exon-exon | NCOR1 | 17 | + | RDX | 11 | - |
| intron-exon | SUB1 | 5 | + | HNRNPA2B1 | 7 | - |
| exon-intron | ND2 | MT | + | FAR2P3 | 2 | + |
| exon-exon | EIF3M | 11 | - | SMARCD2 | 17 | - |
| intron-exon | SUB1 | 5 | + | HNRNPA2B1 | 7 | - |
| exon-exon | AZGP1 | 7 | + | ND2 | MT | + |
| exon-exon | ATP6 | MT | - | RAC1 | 7 | - |
| exon-exon | BRWD1 | 21 | - | GSS | 20 | - |
| exon-exon | COL1A1 | 17 | - | LMLN | 3 | + |
| exon-intron | DHRS7 | 14 | + | NOVA1 | 14 | - |
| exon-exon | PTTG1IP | 21 | - | CNIH4 | 1 | + |
| exon-exon | DSG2 | 18 | - | FAF2 | 5 | - |
| exon-exon | TRIM28 | 19 | - | TRIM28 | 19 | + |
| intron-exon | IPO11 | 5 | + | TMEM267 | 5 | - |
| exon-exon | MIEN1 | 17 | + | ND1 | MT | - |
| exon-exon | PSEN1 | 14 | + | POFUT1 | 20 | + |
| exon-exon | CYTB | MT | - | VCL | 10 | - |
| exon-intron | OFD1 | X | - | TINAGL1 | 1 | - |
| exon-exon | DCAF5 | 14 | - | FAM122B | X | - |
| exon-intron | ABHD11 | 7 | + | BCAS4 | 20 | + |
| exon-exon | GATD3A | 21 | - | TAZ | X | + |
| exon-exon | NUDT21 | 16 | - | ATPAF1 | 1 | + |
| exon-exon | PCBP1 | 2 | - | B2M | 15 | + |
| exon-exon | ND1 | MT | - | LSM8 | 7 | + |
| exon-exon | ERN2 | 16 | + | ERN2 | 16 | - |
| intron-exon | OR7E14P | 11 | - | NSA2 | 5 | + |
| exon-exon | HADH | 4 | + | ATP5F1B | 12 | - |
| exon-exon | FUT3 | 19 | + | FUT3 | 19 | - |
| intron-exon | MLXIPL | 7 | + | COX2 | MT | - |
| exon-exon | PDIA3 | 15 | - | COX3 | MT | - |
| exon-exon | YTHDF2 | 1 | + | YTHDF2 | 1 | - |
| exon-intron | HNRNPF | 10 | - | HNRNPF | 10 | + |
| exon-intron | HLA-F | 6 | - | DLG5 | 10 | - |
| exon-intron | CALCOCO1 | 12 | + | LOC107985050 | 17 | + |
| exon-exon | SPTLC2 | 14 | - | SPTLC2 | 14 | + |
| exon-exon | CIRBP | 19 | - | ND4 | MT | - |
| exon-exon | MUC12 | 7 | - | AAAS | 12 | - |
| exon-intron | LOC152594 | 4 | + | OXNAD1 | 3 | + |
| intron-exon | IGK | 2 | - | ND4 | MT | + |
| exon-exon | ND5 | MT | + | ND6 | MT | + |
| exon-exon | ND6 | MT | + | ND5 | MT | + |
| exon-intron | CNN1 | 19 | + | STX16-NPEPL1 | 20 | + |
| exon-exon | XPNPEP1 | 10 | - | CHI3L1 | 1 | + |
| intron-exon | SEC11A | 15 | + | LOC728138 | 16 | - |
| exon-exon | VPS45 | 1 | - | ND2 | MT | + |
| exon-exon | B4GALT5 | 20 | + | HNRNPA1 | 12 | + |
| exon-exon | GPA33 | 1 | + | SOD1 | 21 | - |
| intron-exon | CHURC1-FNTB | 14 | + | PSMD3 | 17 | - |
| exon-intron | SNRNP200 | 2 | - | SGK2 | 20 | - |
| exon-exon | HR | 8 | - | EIF5B | 2 | - |
| exon-exon | MUC12 | 7 | - | CEACAM5 | 19 | - |
| exon-exon | MUC12 | 7 | - | IL1RN | 2 | - |
| exon-intron | COX3 | MT | + | LOC105369801 | 12 | - |
| exon-exon | MAPK1 | 22 | - | RFT1 | 3 | - |
| intron-exon | IQCG | 3 | - | LAD1 | 1 | + |
| exon-exon | LOXL2 | 8 | + | BCAP31 | X | - |
| exon-exon | TAGLN2 | 1 | - | TAGLN2 | 1 | + |
| exon-exon | ADGRE2 | 19 | + | SNHG18 | 5 | + |
| intron-exon | LINC01876 | 2 | - | PDE7A | 8 | + |
| intron-exon | KIAA1109 | 4 | - | EIF4G1 | 3 | + |
| exon-exon | CD44 | 11 | - | CD44 | 11 | + |
| exon-exon | COL3A1 | 2 | + | COL3A1 | 2 | - |
| intron-exon | ND5 | MT | - | RPL18A | 19 | + |
| intron-exon | ASPHD1 | 16 | + | ADIPOR2 | 12 | + |
| intron-exon | MFSD14B | 9 | + | SH3GLB1 | 1 | + |
| exon-intron | MYH11 | 16 | - | RAB2A | 8 | - |
| intron-exon | GPCPD1 | 20 | + | ZNF91 | 19 | + |
| exon-intron | EGLN1 | 1 | - | LINC01184 | 5 | - |
| exon-intron | HYPK | 15 | + | MFAP1 | 15 | + |
| exon-intron | CASC3 | 17 | - | EXOSC10 | 1 | + |
| exon-intron | CASC3 | 17 | - | EXOSC10 | 1 | + |
| exon-intron | GLUL | 1 | + | SRCAP | 16 | + |
| exon-exon | PHF10 | 6 | + | COX3 | MT | + |
| exon-exon | LAPTM4A | 2 | + | PDZD8 | 10 | - |
| exon-intron | LAPTM4A | 2 | + | PHC3 | 3 | - |
| exon-exon | LAPTM4A | 2 | + | GNAS | 20 | + |
| exon-exon | KPNA2 | 17 | - | TRIM14 | 9 | - |
| exon-exon | BTN3A2 | 6 | - | ARHGAP26 | 5 | - |
| exon-intron | SNAPC1 | 14 | - | PLEKHB2 | 2 | + |
| exon-exon | TAB2 | 6 | - | SLTM | 15 | - |
| intron-exon | OIP5-AS1 | 15 | - | PTN | 7 | - |
| exon-exon | CAMSAP2 | 1 | + | MCCC1 | 3 | - |
| intron-exon | LIMA1 | 12 | - | BEX2 | X | + |
| intron-exon | TACC2 | 10 | - | ATE1 | 10 | - |
| exon-intron | LAMB3 | 1 | - | STOX2 | 4 | - |
| exon-intron | KRT5 | 12 | - | CNIH2 | 11 | + |
| exon-exon | DDX50 | 10 | + | RPL22 | 1 | - |
| exon-intron | UBE2G2 | 21 | + | URI1 | 19 | + |
| exon-exon | DDX21 | 10 | - | BEX2 | X | - |
| exon-intron | IGKC | 2 | + | IGK | 2 | + |
| exon-exon | MARVELD2 | 5 | - | TRIM22 | 11 | - |
| exon-exon | FAM20B | 1 | - | PRSS21 | 16 | - |
| intron-exon | DENND2B | 11 | - | AMMECR1 | X | - |
| exon-exon | IGLL5 | 22 | - | IGLV6-57 | 22 | - |
| exon-intron | KANSL3 | 2 | + | DDHD1 | 14 | - |
| exon-intron | SMC4 | 3 | + | RP11-307P5.1 | 6 | - |
| exon-exon | ABCA5 | 17 | + | AGL | 1 | - |
| exon-exon | BRK1 | 3 | + | LINC00999 | 10 | - |
| exon-exon | PABPC1 | 8 | - | AOPEP | 9 | + |
| intron-exon | AASDH | 4 | + | HTATIP2 | 11 | + |
| intron-exon | BAZ1A | 14 | - | DOCK9 | 13 | - |
| exon-exon | CHD3 | 17 | - | NARS1 | 18 | + |
| exon-intron | ACTG2 | 2 | - | SPDYE10P | 7 | - |
| exon-exon | SCLT1 | 4 | - | DNAJB1 | 19 | - |
| exon-intron | BAZ2A | 12 | + | ERGIC3 | 20 | - |
| exon-exon | AP2B1 | 17 | + | DDX24 | 14 | + |
| exon-exon | RCC2 | 1 | + | AP2B1 | 17 | + |
| intron-exon | CFAP61 | 20 | + | BAZ2A | 12 | - |
| exon-exon | YDJC | 22 | - | UBAP2L | 1 | + |
| exon-intron | PTGES3 | 12 | + | DNAJC1 | 10 | + |
| exon-exon | DDX24 | 14 | - | CAPZA1 | 1 | - |
| intron-exon | ERC1 | 12 | - | ND4 | MT | + |
| intron-exon | LDHB | 12 | - | LDHB | 12 | + |
| intron-exon | MLLT10 | 10 | - | CYTH1 | 17 | + |
| exon-exon | MYH7 | 14 | + | MHRT | 14 | + |
| exon-exon | MALAT1 | 11 | + | TALAM1 | 11 | - |
| exon-intron | BCL6 | 3 | - | LOC100131635 | 3 | + |
| exon-intron | KRCC1 | 2 | - | SEC14L1 | 17 | - |
| exon-intron | CYTB | MT | - | MBP | 18 | - |
| exon-intron | PES1 | 22 | - | ARHGAP26 | 5 | - |
| intron-exon | ARMC9 | 2 | - | MALAT1 | 11 | + |
| intron-exon | EMP2 | 16 | + | NSFL1C | 20 | + |
| intron-exon | RNA18SP5 | 21 | - | CYTB | MT | + |
| intron-exon | PDLIM3 | 4 | + | PNOC | 8 | - |
| intron-exon | MTATP6P1 | 1 | - | CX3CR1 | 3 | - |
| exon-exon | STK38 | 6 | + | STK38 | 6 | - |
| exon-exon | ND2 | MT | - | HNRNPA1P48 | 16 | + |
| exon-exon | ND6 | MT | - | ADNP | 20 | - |
| exon-intron | IGLL5 | 22 | - | IGL | 22 | - |
| exon-exon | SLIT3 | 5 | + | MYH7 | 14 | - |
| exon-exon | EMC10 | 19 | + | SMARCA4 | 19 | - |
| intron-exon | AC084855.1 | 15 | - | FAM13A-AS1 | 4 | + |
| exon-intron | LIMCH1 | 4 | + | MRPS23 | 17 | - |
| exon-intron | NSUN7 | 4 | + | DHRS3 | 1 | + |
| exon-exon | YWHAH | 22 | - | GS1-124K5.11 | 7 | - |
| intron-exon | BMPR2 | 2 | - | GNAS | 20 | + |
| intron-exon | ATP6V1A | 3 | - | COL6A3 | 2 | - |
| intron-exon | ARL15 | 5 | + | DOK6 | 18 | + |
| exon-exon | CLK2P1 | 7 | + | CLK2 | 1 | - |
| exon-exon | S100A14 | 1 | - | S100A14 | 1 | + |
| exon-intron | UROD | 1 | + | MCM3AP-AS1 | 21 | - |
| exon-exon | ARPC2 | 2 | - | CRTAP | 3 | - |
| intron-exon | SDCBP2-AS1 | 20 | + | COL3A1 | 2 | + |
| exon-exon | CHST6 | 16 | - | HLA-DRA | 6 | - |
| exon-intron | RANBP6 | 9 | + | TPST1 | 7 | + |
| exon-exon | RPL39 | X | + | CD99 | Y | + |
| exon-intron | ND1 | MT | + | AEBP2 | 12 | + |
| exon-exon | SFSWAP | 12 | + | SFSWAP | 12 | - |
| exon-exon | THOC3 | 5 | - | EPHA4 | 2 | - |
| intron-exon | DIP2C | 10 | - | CD47 | 3 | - |
| exon-exon | GSTM2 | 1 | + | GSTM1 | 1 | - |
| intron-exon | PUM1 | 1 | - | NONO | X | + |
| exon-intron | ATG3 | 3 | + | ERC2 | 3 | - |
| exon-exon | SNX18 | 5 | - | ARL6IP5 | 3 | + |
| exon-intron | ZNF384 | 12 | - | EIF4B | 12 | - |
| exon-exon | LGMN | 14 | - | ATPAF1 | 1 | + |
| exon-exon | WDR19 | 4 | - | ND4 | MT | + |
| exon-intron | ND2 | MT | - | CSRNP3 | 2 | - |
| exon-exon | USP32 | 17 | - | USP32 | 17 | + |
| exon-exon | YLPM1 | 14 | + | YLPM1 | 14 | - |
| intron-exon | AGBL1 | 15 | + | SNX19 | 11 | + |
| exon-intron | SEC23IP | 10 | - | TESK2 | 1 | + |
| exon-intron | ND6 | MT | - | H6PD | 1 | + |
| exon-exon | ND6 | MT | - | PLP2 | X | - |
| intron-exon | ND5 | MT | - | PLP2 | X | - |
| exon-exon | ALG13 | X | - | RPS3AP6 | 15 | - |
| exon-exon | PKM | 15 | + | PKM | 15 | - |
| exon-exon | IGHG1 | 14 | + | B2M | 15 | + |
| intron-exon | IGFBP7 | 4 | + | CCND2 | 12 | - |
| exon-exon | FBXL7 | 5 | - | SLC11A2 | 12 | - |
| intron-exon | IGK | 2 | + | RPSAP15 | X | - |
| exon-exon | SMARCD1 | 12 | + | ATP2C2 | 16 | + |
| exon-intron | NPIPB3 | 16 | + | LOC112268174 | 16 | + |
| exon-exon | ATP6 | MT | + | ND5 | MT | + |
| exon-intron | SOD1 | 21 | + | SDAD1-AS1 | 4 | + |
| exon-exon | RAD23B | 9 | + | ND6 | MT | + |
| intron-exon | LINC01291 | 2 | - | CCT5 | 5 | + |
| exon-intron | EIF5 | 14 | + | EXT2 | 11 | + |
| exon-exon | SLC7A6 | 16 | - | RPS15P4 | 2 | + |
| intron-exon | XRRA1 | 11 | - | ANXA4 | 2 | + |
| exon-exon | SAP30 | 4 | - | HSP90AA1 | 14 | + |
| exon-exon | LASP1 | 17 | - | RPN1 | 3 | + |
| exon-intron | HLA-C | 6 | - | NDUFS4 | 5 | + |
| exon-exon | ANKLE2 | 12 | - | HLA-B | 6 | + |
| exon-exon | DNAJA1 | 9 | + | DNAJA1 | 9 | - |
| intron-exon | PRLR | 5 | + | RHOG | 11 | - |
| exon-exon | RBFOX2 | 22 | + | AP2B1 | 17 | - |
| exon-exon | PCMTD2 | 20 | - | ND6 | MT | + |
| intron-exon | TKFC | 11 | - | RBM3 | X | - |
| exon-intron | LRRFIP1 | 2 | + | PARD3B | 2 | + |
| intron-exon | HS2ST1 | 1 | + | BCAS2 | 1 | - |
| exon-exon | COX3 | MT | + | ND4 | MT | + |
| intron-exon | MTSS2 | 16 | + | KRT6A | 12 | - |
| exon-exon | LAD1 | 1 | + | LAD1 | 1 | - |
| intron-exon | PCBP2 | 12 | + | KRT6A | 12 | + |
| intron-exon | MTCO1P12 | 1 | - | COX1 | MT | - |
| exon-intron | AP1G1 | 16 | - | SDHAF2 | 11 | - |
| intron-exon | HIBCH | 2 | + | TCAF2 | 7 | - |
| exon-exon | RESF1 | 12 | + | UCHL3 | 13 | + |
| exon-exon | GPATCH8 | 17 | + | HNRNPUL1 | 19 | + |
| exon-intron | COPG1 | 3 | - | EXOC4 | 7 | + |
| intron-exon | GPSM2 | 1 | - | FEM1C | 5 | + |
| exon-intron | MX1 | 21 | - | FNBP1 | 9 | - |
| exon-exon | ATP6 | MT | - | NEAT1 | 11 | + |
| exon-exon | TRIM15 | 6 | - | RALY | 20 | + |
| exon-exon | ABO | 9 | + | TSPYL2 | X | + |
| exon-exon | PAK2 | 3 | - | PTPN11 | 12 | + |
| exon-exon | LONP2 | 16 | + | SIAH1 | 16 | - |
| exon-exon | H6PD | 1 | - | NSD3 | 8 | + |
| exon-intron | CTSS | 1 | + | MTATP6P1 | 1 | + |
| exon-exon | ATP8 | MT | - | BPTF | 17 | + |
| exon-exon | ND4 | MT | - | MGAM2 | 7 | - |
| intron-exon | FAM217A | 6 | - | MRPL39 | 21 | - |
| intron-exon | ECE1 | 1 | - | RCN1P2 | 13 | - |
| exon-exon | IDH3G | X | + | PKP2 | 12 | + |
| exon-intron | NUCKS1 | 1 | - | NR3C2 | 4 | + |
| intron-exon | AFF1 | 4 | + | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | + |
| intron-exon | BICC1 | 10 | - | PAWR | 12 | + |
| exon-exon | RNASEL | 1 | - | TOM1L2 | 17 | - |
| exon-exon | GSTP1 | 11 | - | NSD2 | 4 | + |
| intron-exon | KL | 13 | - | LDB3 | 10 | + |
| exon-exon | MYRF | 11 | - | MYRF | 11 | + |
| exon-intron | GAPVD1 | 9 | + | CACNA2D1 | 7 | + |
| exon-exon | ATP6 | MT | - | CHMP4B | 20 | + |
| exon-exon | DSP | 6 | - | DSP | 6 | + |
| exon-exon | CCAR1 | 10 | + | PAWR | 12 | - |
| exon-intron | TXNL1 | 18 | - | AL591519.1 | 6 | + |
| intron-exon | LGALS4 | 19 | + | MUC1 | 1 | + |
| exon-intron | TRAM1 | 8 | + | CHCHD3 | 7 | - |
| intron-exon | MANBAL | 20 | - | PHLDA1 | 12 | - |
| exon-exon | CKS1BP3 | 5 | - | CKS1B | 1 | - |
| exon-intron | LMO7 | 13 | - | MUC4 | 3 | + |
| intron-exon | CRYL1 | 13 | - | TCF25 | 16 | - |
| exon-exon | NOL4L | 20 | + | ORMDL3 | 17 | - |
| exon-intron | AP5Z1 | 7 | - | RBM17 | 10 | + |
| exon-exon | HLA-B | 6 | + | HLA-B | 6 | - |
| exon-exon | C4A | 6 | + | C4B | 6 | + |
| exon-exon | SSR1 | 6 | + | SRPK2 | 7 | + |
| exon-exon | SMN1 | 5 | + | SMN2 | 5 | - |
| exon-exon | GAPDH | 12 | + | ND4 | MT | - |
| exon-exon | LOC100506023 | 1 | - | TNFSF4 | 1 | - |
| exon-exon | PLSCR1 | 3 | - | PLSCR1 | 3 | + |
| exon-exon | IGHA1 | 14 | + | IGHA1 | 14 | - |
| intron-exon | ADCK1 | 14 | - | MARCKSL1 | 1 | + |
| exon-exon | ZNF232 | 17 | + | ATP6V1G2-DDX39B | 6 | - |
| exon-exon | TMPO | 12 | - | ARPC1A | 7 | + |
| exon-exon | DYNC1LI2 | 16 | - | SYCP1 | 1 | + |
| intron-exon | AC093865.1 | 2 | + | ND4 | MT | - |
| exon-exon | DDAH2 | 6 | + | BAG1 | 9 | - |
| exon-exon | CCT8 | 21 | + | SLC6A14 | X | - |
| intron-exon | LOC105372947 | 22 | - | IGLV3-19 | 22 | - |
| exon-intron | RPL28 | 19 | + | INPP5J | 22 | + |
| exon-exon | COL6A1 | 21 | + | PYGO2 | 1 | - |
| intron-exon | IGH | 14 | - | IGHV3-53 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-48 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-20 | 14 | - |
| exon-intron | IGHV4-59 | 14 | - | IGH | 14 | - |
| exon-intron | IGHG1 | 14 | - | IGH | 14 | - |
| exon-exon | IGHJ6 | 14 | - | IGHG3 | 14 | - |
| exon-exon | HLA-DOB | 6 | + | HLA-DOB | 6 | - |
| exon-exon | UBE2C | 20 | - | UBE2C | 20 | + |
| exon-intron | IGHG1 | 14 | - | IGH | 14 | - |
| exon-exon | HLA-DMB | 6 | + | HLA-DMB | 6 | - |
| exon-exon | IKZF1 | 7 | + | B2M | 15 | + |
| intron-exon | IGH | 14 | - | IGHA2 | 14 | - |
| exon-exon | HLA-B | 6 | + | HLA-B | 6 | - |
| exon-exon | IGLV2-11 | 22 | + | IGLL5 | 22 | + |
| exon-exon | EEF1B2P6 | | + | EEF1B2 | 2 | + |
| exon-exon | ACTG1 | 17 | + | ACTG1 | 17 | - |
| exon-exon | RFNG | 17 | + | TALDO1 | 11 | - |
| exon-intron | ND4L | MT | + | ND4 | MT | + |
| exon-intron | FAM167A | 8 | - | FAM167A-AS1 | 8 | + |
| exon-intron | RNA45SN3 | 21 | + | LOC112268284 | 21 | - |
| intron-exon | OFD1P13Y | | + | RCAN1 | 21 | - |
| exon-exon | INS-IGF2 | 11 | + | IPO9 | 1 | - |
| exon-exon | RIMS3 | 1 | - | CCT7 | 2 | + |
| exon-exon | MARS1 | 12 | + | MARS1 | 12 | - |
| exon-exon | METTL2A | 17 | - | IRGQ | 19 | + |
| exon-exon | NRBP1 | 2 | - | RPL18A | 19 | - |
| intron-exon | TRA | 14 | + | TRAC | 14 | + |
| exon-exon | LOC101928075 | 14 | - | MED6 | | - |
| intron-exon | TMEM252-DT | 9 | + | DDOST | 1 | + |
| exon-exon | FBXO9 | 6 | - | FBXO9 | 6 | + |
| exon-exon | GTPBP6 | Y | + | SETDB1 | 1 | - |
| exon-exon | HNRNPU | 1 | - | HNRNPU | 1 | + |
| exon-exon | AMMECR1 | X | + | CISH | 3 | + |
| intron-exon | ADAM17 | 2 | + | RNA45SN1 | 21 | + |
| exon-exon | MDM2 | 12 | + | UBE2J2 | 1 | + |
| intron-exon | SEC22B4P | 1 | - | HSP90B1 | 12 | + |
| exon-exon | RPL39P3 | 6 | + | RPL39 | X | - |
| exon-exon | MACIR | 5 | + | MACIR | 5 | - |
| intron-exon | ANXA2 | 15 | + | EZR | 6 | + |
| exon-exon | ERI1 | 8 | - | RPP14 | 3 | - |
| exon-intron | STT3B | 3 | - | POLA2 | 11 | - |
| exon-intron | LOC105378419 | 10 | - | LIPA | 10 | - |
| intron-exon | TCEA2 | 20 | + | LOC112268284 | 21 | - |
| intron-exon | Z82190.2 | 22 | - | DEPDC5 | 22 | - |
| exon-exon | ND6 | MT | - | FAHD2A | 2 | - |
| exon-intron | FUS | 16 | - | PSMB7 | 9 | - |
| exon-exon | VPS72 | 1 | + | PNN | 14 | + |
| exon-intron | SH3RF2 | 5 | - | TANC1 | 2 | - |
| exon-exon | USP45 | 6 | - | PNISR | 6 | - |
| intron-exon | LOC100129931 | 4 | + | HLA-DPA1 | 6 | + |
| intron-exon | ZNF546 | 19 | + | C19orf47 | 19 | + |
| exon-exon | SERPINB1 | 6 | + | PAFAH2 | 1 | + |
| exon-exon | SHARPIN | 8 | + | RNA45SN2 | 21 | - |
| exon-exon | TTC21A | 3 | - | SALL2 | 14 | + |
| exon-exon | TGFBR3 | 1 | + | PTPRC | 1 | + |
| exon-intron | LOC105378481 | 10 | + | AL355512.1 | 10 | + |
| exon-exon | COL6A3 | 2 | + | LGMN | 14 | + |
| exon-exon | EBF4 | 20 | - | RNA45SN2 | 21 | - |
| exon-intron | ZNF331 | 19 | - | PCGF5 | 10 | - |
| exon-intron | FBXL6 | 8 | + | TNK2 | 3 | + |
| exon-intron | ERCC6L2 | 9 | - | ABCC3 | 17 | - |
| exon-intron | HNF1A-AS1 | 12 | + | HNF1A | 12 | + |
| exon-exon | IGFBP2 | 2 | - | FXR1 | 3 | - |
| exon-intron | PSTPIP2 | 18 | + | KMO | 1 | - |
| intron-exon | HIRA | 22 | + | CYTB | MT | + |
| exon-intron | PCDH12 | 5 | - | COQ8A | 1 | - |
| intron-exon | AC006230.1 | 4 | - | HS3ST1 | 4 | - |
| intron-exon | ADAM10 | 15 | - | LIPC | 15 | - |
| exon-exon | FEN1 | 11 | - | SULF1 | 8 | - |
| exon-intron | ELOVL3 | 10 | - | GTF3C1 | 16 | + |
| exon-exon | CDPF1 | 22 | + | HUWE1 | X | + |
| exon-exon | VNN1 | 6 | + | CAD | 2 | - |
| exon-exon | ARHGEF4 | 2 | + | C2orf27A | 2 | + |
| intron-exon | ATP6V1E2 | 2 | + | LOC107986631 | 6 | + |
| exon-exon | YTHDC1 | 4 | + | EMG1 | 12 | + |
| exon-exon | LYZ | 12 | - | DDOST | 1 | + |
| exon-exon | GLT8D1 | 3 | - | GNL3 | 3 | - |
| exon-intron | NECTIN3-AS1 | 3 | + | NECTIN3 | 3 | + |
| exon-exon | JMJD7-PLA2G4B | 15 | - | SPARC | 5 | + |
| exon-exon | CANX | 5 | - | CANX | 5 | + |
| exon-intron | LIMD2 | 17 | + | HSP90AB2P | 4 | + |
| exon-exon | NDUFAF8 | 17 | - | NDUFAF8 | 17 | + |
| exon-intron | LENG9 | 19 | - | NYAP2 | 2 | - |
| exon-exon | ZBTB17 | 1 | + | AP2A1 | 19 | - |
| exon-exon | PPP2R1A | 19 | - | PPP2R1A | 19 | + |
| intron-exon | LOC101926967 | 17 | + | PCK1 | 20 | + |
| intron-exon | LOC105371516 | 17 | - | DNAH2 | 17 | - |
| exon-intron | RPS27L | 15 | + | UBR2 | 6 | + |
| exon-exon | RPS23 | 5 | + | INS-IGF2 | 11 | - |
| exon-intron | SPTAN1 | 9 | + | NTRK3 | 15 | - |
| exon-intron | GNAS | 20 | - | DNM1 | | - |
| exon-exon | PTPRN2 | 7 | - | PRKAR1B | 7 | - |
| exon-exon | DPYSL2 | 8 | + | RPL10 | X | + |
| exon-exon | URGCP-MRPS24 | 7 | + | CLU | 8 | - |
| intron-exon | LOC105370027 | 12 | - | ASXL3 | 18 | + |
| exon-exon | EIF3K | 19 | + | STMN3 | 20 | + |
| exon-exon | NACA | 12 | - | TUBB2B | 6 | - |
| exon-exon | PLXNA4 | | - | ACTB | 7 | - |
| exon-exon | RPL28 | 19 | + | GAPDH | 12 | + |
| exon-intron | EEF2 | 19 | - | LRRC4B | 19 | - |
| exon-exon | TUBB | 6 | - | MGAT2 | 14 | + |
| exon-exon | GFAP | 17 | - | CDK18 | 1 | - |
| exon-exon | MLXIP | 12 | - | MLXIP | 12 | + |
| exon-exon | MLXIP | 12 | - | MLXIP | 12 | + |
| exon-exon | MCAM | 11 | - | CBL | 11 | + |
| exon-exon | RPTOR | 17 | - | RPTOR | 17 | + |
| exon-exon | ANXA11 | | + | ANXA11 | 10 | - |
| exon-exon | PSMD2 | 3 | - | PSMD2 | 3 | + |
| exon-intron | LOC101927830 | | - | AC234781.1 | | - |
| exon-exon | STAG2 | X | + | EIF3A | 10 | - |
| exon-exon | MYO18A | 17 | + | MYO18A | 17 | - |
| exon-exon | CERS2 | 1 | + | CALM1 | 14 | - |
| exon-intron | CCDC144B | | - | FAM106A | | - |
| exon-exon | TYW3 | 1 | - | TYW3 | 1 | + |
| exon-exon | TMEM223 | 11 | + | TMEM223 | | - |
| exon-exon | ARAP1 | 11 | + | ARAP1 | 11 | - |
| intron-exon | LOC105376956 | 3 | + | IQSEC1 | 3 | - |
| exon-exon | NLRC3 | 16 | + | NLRC3 | 16 | - |
| exon-exon | PAX5 | 9 | + | PAX5 | 9 | - |
| exon-exon | USP22 | 17 | + | USP22 | 17 | - |
| intron-exon | GTF2IP9 | | - | LINC00174 | 7 | - |
| exon-exon | CMIP | 16 | - | CMIP | 16 | + |
| intron-exon | DLGAP1 | 18 | - | ZNF592 | 15 | + |
| intron-exon | BIK | 22 | - | TTLL1 | 22 | - |
| exon-exon | NUSAP1 | 15 | - | SLC2A3 | 12 | + |
| intron-exon | AC011290.1 | 7 | + | LOC105375240 | 7 | + |
| intron-exon | EP300 | 22 | + | EP300-AS1 | 22 | + |
| exon-exon | PPIH | 1 | + | MTSS2 | 16 | - |
| exon-intron | SMCO4 | 11 | + | TERF2IP | 16 | + |
| exon-intron | UCP2 | 11 | + | LOC107985511 | 21 | + |
| exon-intron | RPS8 | 1 | - | GNAL | 18 | - |
| exon-exon | AKAP3 | 12 | + | AKAP3 | 12 | - |
| intron-exon | LOC107985203 | 1 | + | EHF | 11 | - |
| intron-exon | SPANXA2-OT1 | X | + | USP42 | 7 | - |
| intron-exon | EIF4ENIF1 | 22 | - | OR7E2P | 11 | - |
| exon-exon | HLA-DPA1 | 6 | + | TASOR2 | 10 | - |
| exon-exon | RNA45SN1 | 21 | + | ZDBF2 | 2 | + |
| exon-intron | TIMM17A | 1 | - | MIR4432HG | 2 | + |
| exon-exon | MTCH1 | 6 | + | MTCH1 | 6 | - |
| exon-exon | MAP4K4 | 2 | - | ZNF280D | 15 | + |
| exon-intron | TUG1 | 22 | - | TANK | 2 | - |
| exon-exon | RPS3A | 4 | - | RPS3AP6 | 15 | + |
| exon-exon | CLU | 8 | + | CLU | 8 | - |
| intron-exon | VPS9D1 | 16 | - | VPS9D1-AS1 | 16 | + |
| exon-exon | ATP5MD | 10 | + | ATP5MD | 10 | - |
| exon-exon | CCDC92 | 12 | + | CCDC92 | 12 | - |
| exon-intron | CCT2 | 12 | - | PAN3 | 13 | - |
| exon-exon | SCD | 10 | - | IGFBP5 | 2 | + |
| exon-exon | GANC | 15 | - | GANC | 15 | + |
| exon-exon | LTBP3 | 11 | - | SCYL1 | 11 | - |
| exon-exon | RAI14 | 5 | - | DDR2 | 1 | - |
| intron-exon | AP000235.1 | 21 | - | LINC01692 | 21 | - |
| exon-exon | ITPRIPL1 | | - | ITPRIPL1 | | + |
| exon-intron | TCTN3 | 10 | + | WWOX | 16 | + |
| intron-exon | AL683813.1 | X | - | RBM39 | 20 | - |
| exon-exon | MLEC | 12 | + | MLEC | 12 | - |
| exon-intron | RNA45SN2 | 21 | - | AC000067.1 | 22 | + |
| exon-exon | GPBP1L1 | 1 | + | CBX3 | 7 | + |
| intron-exon | KCNAB1 | 3 | + | RPS6 | 9 | - |
| exon-intron | ANXA2 | 15 | + | USP34 | 2 | + |
| exon-intron | ND5 | MT | - | ABCA4 | 1 | + |
| exon-exon | TNFAIP8L1 | 19 | - | BAZ2B | 2 | - |
| intron-exon | TET1 | 10 | - | COL4A2 | 13 | + |
| intron-exon | TEX38 | 1 | + | RAD23B | 9 | - |
| exon-exon | COX2 | MT | + | COX2 | MT | - |
| exon-exon | ND4 | MT | + | ATP6 | MT | + |
| exon-exon | RNA45SN2 | 21 | - | RNA45SN3 | 21 | + |
| exon-exon | ND2 | MT | - | HSP90AB1 | 6 | - |
| exon-exon | SEPTIN9 | 17 | - | DDX41 | 5 | + |
| exon-exon | COX2 | MT | - | COX2 | MT | + |
| intron-exon | SORBS2 | 4 | + | LOC112268252 | 19 | - |
| exon-intron | TRIM31 | 6 | + | TRIM31-AS1 | 6 | + |
| exon-exon | RNA45SN3 | 21 | + | MYL9 | 20 | + |
| intron-exon | RNR2 | MT | - | DCTPP1 | 16 | - |
| exon-exon | LAMA3 | 18 | + | LAMA3 | 18 | - |
| exon-intron | ND4 | MT | - | ARFGEF1 | 8 | - |
| intron-exon | NUMA1 | 11 | - | INPP5F | 10 | - |
| exon-intron | GTPBP4 | 10 | - | HECW1 | 7 | - |
| exon-exon | PDS5B | 13 | + | SSB | 2 | + |
| exon-intron | PPP1R7 | 2 | - | SRP72 | 4 | - |
| intron-exon | JPX | X | + | SERPINB1 | 6 | + |
| exon-exon | ENTPD5 | 14 | - | TCTN3 | 10 | + |
| exon-intron | CAP1 | 1 | - | METTL21A | 2 | - |
| exon-exon | IL13RA1 | X | + | NUCKS1 | 1 | + |
| exon-intron | ND2 | MT | - | CUX1 | 7 | - |
| exon-intron | CORO7-PAM16 | 16 | + | CORO7-PAM16 | 16 | - |
| exon-exon | RCC1 | 1 | - | RCC1 | 1 | + |
| intron-exon | PROS1 | 3 | - | GLUL | 1 | + |
| exon-exon | RNA45SN2 | 21 | - | ATP6 | MT | - |
| exon-intron | ATP6 | MT | - | USP36 | 17 | + |
| exon-exon | ANKHD1-EIF4EBP3 | 5 | + | HMGXB4 | 22 | + |
| exon-exon | CYTB | MT | + | CYTB | MT | - |
| intron-exon | EXOC4 | 7 | + | CSRNP2 | 12 | - |
| exon-intron | ARFGAP2 | 11 | - | FGF13 | X | - |
| intron-exon | NIN | 14 | - | MAP4K5 | 14 | - |
| exon-exon | LINC00976 | 8 | + | CALR | 19 | - |
| exon-intron | RTN4RL1 | 17 | + | ARHGAP39 | 8 | + |
| exon-exon | SPRR2F | 1 | + | MFSD13A | 10 | + |
| exon-exon | ZNF384 | 12 | + | ELOA | 1 | + |
| exon-intron | RAD1 | 5 | - | USP4 | 3 | + |
| exon-exon | CHD8 | 14 | - | HNRNPC | 14 | - |
| exon-intron | ND4 | MT | - | RUFY3 | 4 | + |
| exon-exon | RNA45SN1 | 21 | - | COL6A1 | 21 | + |
| exon-intron | ZFP36 | 19 | + | KDM2A | 11 | + |
| intron-exon | MTCO3P12 | 1 | - | COX3 | MT | - |
| exon-intron | COL3A1 | 2 | - | RNR2 | MT | + |
| exon-exon | ND6 | MT | - | COX1 | MT | - |
| intron-exon | FRMD5 | 15 | - | FLNA | X | - |
| intron-exon | FAR2 | 12 | + | ARHGEF7 | 13 | + |
| intron-exon | RMST | 12 | - | PLAU | 10 | + |
| exon-exon | ND4 | MT | - | EIF2S3 | X | + |
| exon-exon | MOV10 | 1 | + | RHOC | 1 | - |
| exon-exon | RAD50 | 5 | - | ND4 | MT | - |
| exon-exon | PMP22 | 17 | - | THBS2 | 6 | - |
| exon-exon | TALAM1 | 11 | - | MALAT1 | 11 | + |
| exon-exon | SLC1A7 | 1 | - | PODN | 1 | - |
| exon-exon | EP300 | 22 | - | EP300 | 22 | + |
| exon-exon | RNA45SN2 | 21 | - | SNHG10 | 14 | - |
| intron-exon | TRNS1 | MT | - | CALM1 | 14 | + |
| exon-intron | ENTPD1 | 10 | + | ENTPD1-AS1 | 10 | - |
| exon-exon | OSTC | 4 | + | ND4 | MT | + |
| intron-exon | EVC2 | 4 | - | NRAV | 12 | - |
| exon-intron | ND4 | MT | - | AAMDC | 11 | + |
| exon-exon | NCL | 2 | - | NCL | 2 | + |
| exon-exon | FTL | 19 | - | FTLP3 | 20 | + |
| exon-intron | ACSBG1 | 15 | - | TSHZ2 | 20 | + |
| exon-intron | ATP6 | MT | - | CNOT6 | 5 | + |
| exon-intron | ATP5IF1 | 1 | - | STIL | 1 | - |
| exon-exon | SAT1 | X | - | SAT1 | X | + |
| intron-exon | FCHSD2 | 11 | + | ND4 | MT | + |
| exon-intron | IFITM1 | 11 | + | LOC107985325 | 19 | - |
| exon-intron | TMEM237 | 2 | + | RNR2 | MT | + |
| exon-exon | NAA50 | 3 | - | NAA50 | 3 | + |
| exon-exon | GCG | 2 | - | UBE2NL | | + |
| intron-exon | LOC101929532 | 2 | + | GCG | 2 | - |
| exon-exon | CANX | 5 | + | CANX | 5 | - |
| exon-exon | EMC2 | | + | PPIA | 7 | + |
| exon-exon | CADPS | 3 | - | AMY2B | 1 | + |
| exon-intron | C9orf78 | 9 | + | SRSF11 | 1 | - |
| exon-exon | THTPA | 14 | + | LOC102724814 | 14 | + |
| exon-exon | FRMPD3 | X | - | LIX1L-AS1 | 1 | + |
| exon-intron | SEMA6A | 5 | + | CACNA2D3 | 3 | + |
| exon-intron | PNMA2 | 8 | + | RABGAP1L | 1 | - |
| exon-exon | FTL | 19 | - | RAPGEF1 | 9 | + |
| exon-intron | NDRG2 | 14 | + | ERC1 | 12 | - |
| exon-exon | PSMD8 | 19 | - | POU2F1 | 1 | - |
| exon-exon | TOMM34 | 20 | + | LUM | 12 | + |
| intron-exon | UBA3 | 3 | - | UBA3 | 3 | + |
| intron-exon | DIPK1A | 1 | - | RPL14 | 3 | + |
| intron-exon | GSTO1 | 10 | + | GSTO2 | 10 | + |
| exon-intron | LOC102724773 | 9 | - | AL359644.1 | 9 | - |
| intron-exon | LOC105373358 | 2 | - | TMEM18-DT | 2 | - |
| intron-exon | AC018653.1 | 12 | + | PEX5 | 12 | + |
| exon-intron | LOC107985263 | 1 | + | AL929236.1 | 1 | + |
| exon-exon | TMEM150A | 2 | + | CAPN10 | 2 | - |
| exon-intron | GTF2IRD1 | 7 | - | LINC01752 | 20 | - |
| exon-exon | LSM14B | 20 | - | SCD | 10 | - |
| exon-intron | FRS3 | 6 | + | GUSBP14 | 5 | + |
| exon-intron | EDC4 | 16 | - | LOC105376844 | 17 | + |
| exon-intron | PA2G4 | 12 | - | AP003066.1 | 11 | - |
| exon-intron | MFAP4 | 17 | + | INPP4A | 2 | - |
| exon-exon | TNFRSF10B | 8 | + | SLC2A3 | 12 | + |
| exon-intron | TNFAIP2 | 14 | - | KDM2B | 12 | + |
| exon-exon | MIR202HG | 10 | + | RNA45SN3 | 21 | - |
| intron-exon | IGL | 22 | - | EZR | 6 | + |
| exon-intron | NUCKS1 | 1 | - | KLC3 | 19 | + |
| intron-exon | SBF2-AS1 | 11 | + | SPARC | 5 | + |
| exon-exon | ND4L | MT | - | SLC20A1 | 2 | + |
| exon-exon | FTL | 19 | - | PPP1CA | 11 | - |
| exon-intron | ND1 | MT | + | ECHDC2 | 1 | - |
| exon-exon | ANKHD1-EIF4EBP3 | 5 | - | RFTN2 | 2 | - |
| exon-intron | ND1 | MT | - | RNR2 | MT | - |
| exon-exon | TXNIP | 1 | + | CERS6 | 2 | + |
| exon-intron | TMEM63A | 1 | + | ARHGAP12 | 10 | - |
| exon-intron | KMT2E | 7 | - | MAP3K5 | 6 | + |
| exon-intron | TIPRL | 1 | - | ABR | 17 | - |
| exon-exon | MIEN1 | 17 | + | ND4 | MT | + |
| exon-intron | PTMA | 2 | - | DTWD2 | 5 | - |
| exon-intron | KPNA6 | 1 | - | MVP | 16 | + |
| exon-intron | ND5 | MT | - | AP001347.1 | 21 | + |
| exon-intron | RPS23 | 5 | + | AC138811.1 | 16 | - |
| exon-exon | SELENOI | 2 | - | LARP1 | 5 | + |
| exon-intron | NARS1 | 18 | - | PVT1 | 8 | + |
| exon-exon | TBC1D3G | 17 | + | NPEPPSP1 | 17 | - |
| exon-exon | ATP6 | MT | - | COX1 | MT | - |
| exon-exon | NHP2 | 5 | + | LMF2 | 22 | - |
| intron-exon | MCAM | 11 | - | TMEM41B | 11 | - |
| exon-exon | IVNS1ABP | 1 | + | SF3B2 | 11 | - |
| exon-exon | DVL3 | 3 | - | RRP36 | 6 | + |
| exon-intron | SMC4 | 3 | + | FNBP1L | 1 | - |
| exon-exon | RNA45SN2 | 21 | + | CYTB | MT | - |
| exon-exon | ND4 | MT | - | ND4 | MT | + |
| exon-exon | SYT7 | 11 | + | SNRPD3 | 22 | + |
| exon-exon | ND4 | MT | - | MUC12 | 7 | - |
| exon-exon | AHCYL2 | 7 | + | UBC | 12 | + |
| exon-exon | PRSS23 | 11 | - | PRSS23 | 11 | + |
| exon-intron | ATP6 | MT | - | RNR2 | MT | - |
| exon-exon | ND4 | MT | + | ND2 | MT | + |
| exon-exon | VDAC1 | 5 | - | PPIA | 7 | + |
| intron-exon | PRH1-PRR4 | 12 | + | ND5 | MT | - |
| exon-intron | ATP6 | MT | - | ATP6 | MT | + |
| exon-exon | DVL3 | 3 | - | SGK2 | 20 | + |
| exon-intron | MAFG | 17 | + | ACIN1 | 14 | - |
| intron-exon | MEIS2 | 15 | + | RNA45SN2 | 21 | - |
| exon-exon | PPA1 | 10 | + | DSP | 6 | - |
| exon-intron | PDIA3 | 15 | + | PARVB | 22 | - |
| exon-intron | STRAP | 12 | + | IMMT | 2 | + |
| exon-exon | PPA1 | 10 | - | PPA1 | 10 | + |
| exon-exon | COX1 | MT | - | SETBP1 | 18 | + |
| intron-exon | CCDC84 | 11 | - | PIGR | 1 | - |
| exon-exon | HMGB2 | 4 | - | EARS2 | 16 | + |
| exon-exon | ND4 | MT | - | RNF213 | 17 | + |
| exon-exon | NMD3 | 3 | - | SYNM | 15 | - |
| exon-exon | CTSD | 11 | + | CTSD | 11 | - |
| exon-exon | PML | 15 | + | PML | 15 | - |
| exon-exon | SSR1 | 6 | + | ND5 | MT | + |
| exon-exon | SLC12A6 | 15 | - | EMC4 | 15 | - |
| exon-intron | PDLIM7 | 5 | + | PRRX1 | 1 | - |
| exon-exon | PIP4K2C | 12 | + | MIEN1 | 17 | - |
| exon-exon | IPO5 | 13 | - | IPO5 | 13 | + |
| exon-exon | AP2A1 | 19 | - | AP2A1 | 19 | + |
| exon-exon | AP2A1 | 19 | + | AP2A1 | 19 | - |
| exon-intron | IPO5 | 13 | + | PTPRG | 3 | + |
| exon-intron | MPHOSPH10 | 2 | - | SLC13A3 | 20 | - |
| exon-exon | STX2 | 12 | + | TNIK | 3 | - |
| exon-exon | SLCO2B1 | 11 | - | SLCO2B1 | 11 | + |
| exon-exon | ATP8 | MT | + | COX1 | MT | + |
| exon-exon | ND2 | MT | - | GLS | 2 | - |
| exon-exon | ND4 | MT | + | ND1 | MT | + |
| exon-exon | CAPNS1 | 19 | + | SPARC | 5 | + |
| exon-exon | FECH | 18 | - | FECH | 18 | + |
| exon-exon | CLDND1 | 3 | - | SDE2 | 1 | - |
| exon-exon | STK3 | 8 | + | STK3 | 8 | - |
| exon-exon | ND4 | MT | - | ND4 | MT | + |
| exon-exon | ATP6 | MT | - | FUBP1 | 1 | + |
| exon-intron | IGSF1 | X | + | SRGAP2-AS1 | 1 | - |
| exon-exon | CDH1 | 16 | + | ATP1A1 | 1 | + |
| exon-exon | ND4 | MT | + | ND6 | MT | + |
| exon-exon | CYBB | X | - | MFSD14C | 9 | - |
| exon-exon | MMP14 | 14 | - | MMP14 | 14 | + |
| intron-exon | ZNF83 | 19 | + | COL5A1 | 9 | + |
| intron-exon | PJVK | 2 | + | THY1 | 11 | - |
| exon-exon | CREB1 | 2 | + | HSP90B1 | 12 | - |
| exon-intron | HINT3 | 6 | - | SCAF8 | 6 | + |
| intron-exon | LSM12 | 17 | - | CDKL1 | 14 | + |
| intron-exon | ZNF627 | 19 | + | PSAP | 10 | + |
| exon-exon | RPL14P1 | 12 | - | ATP6 | MT | - |
| exon-exon | CRKL | 22 | + | SPTBN1 | 2 | - |
| exon-exon | ITGB8 | 7 | + | ITGB8 | 7 | - |
| exon-intron | ISCA1 | 9 | - | MRPS22 | 3 | + |
| exon-exon | UBE2R2 | 9 | - | ST6GAL1 | 3 | + |
| exon-intron | BPTF | 17 | - | ARHGAP26 | 5 | - |
| exon-exon | ND2 | MT | - | ATP6V0A1 | 17 | + |
| exon-exon | ATP6 | MT | - | SP1 | 12 | + |
| exon-exon | STT3B | 3 | - | HSP90B1 | 12 | - |
| exon-intron | ABCC4 | 13 | + | ATP9A | 20 | + |
| intron-exon | FNIP1 | 5 | + | ANLN | 7 | + |
| exon-exon | TOP2B | 3 | + | FBN1 | 15 | + |
| exon-exon | SETD7 | 4 | + | FBN1 | 15 | + |
| exon-exon | TIMM9 | 14 | + | KIAA0586 | 14 | + |
| exon-exon | ND2 | MT | + | SEPTIN11 | 4 | + |
| exon-intron | IL1RN | 2 | - | TAP2 | 6 | + |
| exon-exon | ZNHIT6 | 1 | + | ZNF595 | 4 | + |
| exon-intron | VEGFA | 6 | - | SUZ12P1 | 17 | + |
| exon-intron | BAZ1B | 7 | + | RNR2 | MT | + |
| exon-intron | SH3GLB1 | 1 | - | CSNK2A1 | 20 | + |
| intron-exon | AL356585.4 | 13 | + | LOC107987186 | 13 | + |
| exon-exon | LOC105370103 | 13 | + | LOC105370103 | 13 | - |
| exon-exon | CASC9 | 8 | + | CASC9 | 8 | - |
| exon-intron | CWC25 | 17 | + | PHF21B | 22 | + |
| exon-intron | RPL13 | 16 | - | MLLT3 | 9 | + |
| intron-exon | IGL | 22 | - | TPX2 | 20 | - |
| intron-exon | IGKC | 2 | + | HPS4 | 22 | + |
| exon-intron | AKR1A1 | 1 | - | CBY1 | 22 | - |
| intron-exon | IGH | 14 | + | IGHA2 | 14 | + |
| intron-exon | AC098479.1 | 3 | - | RPP14 | 3 | - |
| exon-exon | CCER2 | 19 | - | BGN | X | - |
| exon-intron | SFPQ | 1 | - | NR4A1 | 12 | - |
| exon-exon | OSTC | 4 | - | DDOST | 1 | + |
| exon-intron | LOC105374013 | 3 | - | AC084198.2 | 3 | - |
| exon-exon | ADGRF4 | 6 | - | CALR | 19 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| exon-exon | CAVIN3 | 11 | + | LOC101927825 | 11 | + |
| exon-exon | RRM2 | 2 | - | TGOLN2 | 2 | + |
| intron-exon | IGKC | 2 | + | RBM10 | X | - |
| exon-intron | UPK1B | 3 | - | NOL9 | 1 | + |
| intron-exon | CTR9 | 11 | - | BMS1P20 | 22 | - |
| exon-exon | UFC1 | 1 | - | NFATC2IP | 16 | - |
| intron-exon | RBX1 | 22 | - | ACVRL1 | 12 | - |
| exon-intron | IDS2 | X | + | LOC106050102 | X | + |
| exon-exon | CARD18 | 11 | + | LOC105369468 | 11 | + |
| exon-intron | IL1R1 | 2 | + | AC007271.3 | 2 | + |
| exon-exon | TBL1X | X | - | PAFAH1B2 | 11 | - |
| intron-exon | TOX | 8 | + | ZNF543 | 19 | - |
| exon-exon | CXCL16 | 17 | - | MED11 | 17 | - |
| exon-exon | TMEM131 | 2 | + | TMEM131 | 2 | - |
| exon-exon | RNA45SN3 | 21 | + | SNHG17 | 20 | - |
| intron-exon | IGL | 22 | + | STAG3L5P-PVRIG2P-PILRB | 7 | + |
| exon-exon | NOL12 | 22 | + | CARD6 | 5 | + |
| exon-exon | MFGE8 | 15 | - | PABPC1 | 8 | - |
| intron-exon | ADARB1 | 21 | + | NFKBIZ | 3 | + |
| exon-intron | DDT | 22 | - | LOC107985558 | 22 | - |
| exon-exon | FBL | 19 | - | HLA-E | 6 | + |
| intron-exon | KRT17 | 17 | - | TPM2 | 9 | - |
| intron-exon | APTX | 9 | - | SLC50A1 | 1 | + |
| exon-intron | TMSB10 | 2 | + | SDHAP2 | 3 | + |
| exon-intron | ABCA6 | 17 | - | FRG1-DT | 4 | - |
| exon-exon | CDH11 | 16 | - | LOC100132287 | 1 | - |
| intron-exon | OSGEP | 14 | + | DHTKD1 | 10 | - |
| exon-exon | DCHS1 | 11 | + | LINC00442 | 13 | - |
| exon-intron | NUDT15 | 13 | - | MSH3 | 5 | - |
| exon-exon | ARIH2OS | 3 | + | NHLRC2 | 10 | - |
| exon-intron | LOC100533640 | 17 | - | AC131274.3 | 17 | - |
| exon-exon | TIMP1 | X | + | COL1A1 | 17 | - |
| intron-exon | IGH | 14 | - | IGHV4-30-2 | 14 | - |
| exon-exon | RHCE | 1 | - | TMEM50A | 1 | + |
| exon-intron | DNAJC16 | 1 | + | MS4A10 | 11 | + |
| exon-exon | CCNL2 | 1 | + | RNA45SN2 | 21 | - |
| intron-exon | TP53BP1 | 15 | - | ADAL | 15 | - |
| exon-exon | NIPSNAP1 | 22 | + | COL1A1 | 17 | + |
| intron-exon | RPS9P2 | 22 | - | IGHG1 | 14 | + |
| exon-exon | AKAP7 | 6 | - | TUBB4B | 9 | - |
| exon-intron | DNAH11 | 7 | + | MICAL2 | 11 | - |
| exon-exon | CAVIN3 | 11 | + | LOC101927825 | 11 | + |
| exon-intron | PAFAH1B2 | 11 | - | DSCR9 | 21 | + |
| exon-intron | TMEM268 | 9 | - | PSMA3-AS1 | 14 | + |
| intron-exon | AL592156.2 | X | + | LOC105369624 | 12 | - |
| exon-exon | TXN2 | 22 | + | DIAPH3 | 13 | + |
| intron-exon | RP11-114J13.1 | 5 | + | LOC101927488 | 5 | + |
| exon-intron | FBRSL1 | 12 | - | RBM42 | 19 | + |
| exon-exon | ARL10 | 5 | - | BCL6 | 3 | + |
| exon-exon | HMGA1 | 6 | + | HMGA1 | 6 | - |
| exon-intron | EPS8 | 12 | + | EPS8 | 12 | - |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | UGDH | 4 | + | RPL7L1 | 6 | - |
| exon-intron | BTN3A1 | 6 | - | BTN2A2 | 6 | - |
| intron-exon | AL683813.1 | X | - | RBM39 | 20 | - |
| exon-exon | H1-0 | 22 | - | KLF4 | 9 | - |
| intron-exon | L3MBTL3 | 6 | + | MINDY1 | 1 | + |
| intron-exon | PIAS3 | 1 | - | PODN | 1 | + |
| exon-exon | WTAP | 6 | + | NUCKS1 | 1 | - |
| exon-intron | RNA45SN2 | 21 | - | URI1 | 19 | - |
| exon-exon | SRP14 | 15 | - | IARS1 | 9 | - |
| exon-exon | ZDHHC18 | 1 | + | UBE2N | 12 | + |
| exon-intron | CRYZL2P-SEC16B | 1 | + | GLB1 | 3 | - |
| exon-exon | ATP6 | MT | + | ATP8 | MT | + |
| intron-exon | FGD6 | 12 | - | ARHGAP24 | 4 | - |
| intron-exon | FAM13A | 4 | - | UBN1 | 16 | + |
| exon-exon | ATP6 | MT | + | WDR45B | 17 | - |
| intron-exon | CRELD1 | 3 | - | CRELD1 | 3 | + |
| exon-intron | ND4 | MT | - | SLA | 8 | - |
| exon-exon | COX3 | MT | - | LRRN1 | 3 | + |
| intron-exon | RNA28SP | 21 | - | RNA45SN2 | 21 | - |
| exon-intron | ATP8B1 | 18 | + | RNR2 | MT | - |
| intron-exon | LONP1 | 19 | + | ND2 | MT | - |
| exon-exon | ND4 | MT | - | ND4 | MT | + |
| exon-intron | HSP90B1 | 12 | - | DDX17 | 22 | + |
| exon-intron | TALAM1 | 11 | - | ACYP2 | 2 | - |
| exon-intron | ARFGEF2 | 20 | + | LOC105374344 | 4 | + |
| exon-exon | MAPK1 | 22 | - | RFT1 | 3 | - |
| intron-exon | FNDC3B | 3 | + | PITPNC1 | 17 | + |
| intron-exon | ASPHD1 | 16 | + | ADIPOR2 | 12 | + |
| exon-intron | ND6 | MT | - | LPAR1 | 9 | - |
| exon-exon | SYNE2 | 14 | + | NAPEPLD | 7 | + |
| intron-exon | CELF2 | 10 | - | ATP6 | MT | + |
| exon-intron | CTTNBP2 | 7 | + | CTTNBP2 | 7 | - |
| intron-exon | ZNF438 | 10 | + | ND1 | MT | + |
| exon-exon | ALKBH6 | 19 | - | ND4 | MT | + |
| exon-intron | ZMPSTE24 | 1 | - | AC243967.1 | 19 | + |
| exon-intron | HINT1 | 5 | + | RNR2 | MT | + |
| exon-intron | TAF15 | 17 | - | AP2B1 | 17 | - |
| intron-exon | KANSL2 | 12 | + | KANSL2 | 12 | - |
| exon-intron | LOC100996723 | 1 | + | AC245297.3 | 1 | - |
| exon-exon | LOC105375489 | 7 | - | ARF5 | 7 | - |
| exon-intron | PTMAP5 | 13 | - | GLCCI1 | 7 | - |
| exon-exon | LYZ | 12 | - | ZNF667 | 19 | + |
| intron-exon | CUL4A | 13 | - | PCID2 | 13 | - |
| exon-exon | METTL25 | 12 | - | RPL17-C18orf32 | 18 | - |
| exon-intron | RPS9 | 19 | - | COMMD5 | 8 | - |
| exon-exon | ALDH1B1 | 9 | - | SLC35F5 | 2 | + |
| exon-exon | ARL5A | 2 | + | ANKRD29 | 18 | - |
| intron-exon | AL162411.1 | 9 | - | RNF2P1 | 9 | - |
| intron-exon | LOC105373622 | 2 | - | PNISR | 6 | + |
| intron-exon | ERAP1 | 5 | - | EIF2S3 | X | - |
| exon-exon | GRSF1 | 4 | - | CIAO1 | 2 | + |
| exon-exon | ATP5F1A | 18 | + | ZNF609 | 15 | + |
| exon-exon | CHKB-CPT1B | 22 | + | CHKB-CPT1B | 22 | - |
| intron-exon | TMED10 | 14 | - | NEK9 | 14 | - |
| intron-exon | TCF12 | 15 | - | WNK1 | 12 | + |
| exon-intron | ND3 | MT | - | CROCC | 1 | + |
| exon-intron | ACTG1 | 17 | + | LOC105376360 | 10 | - |
| exon-intron | COL1A2 | 7 | - | AC087386.1 | 15 | + |
| exon-intron | INS-IGF2 | 11 | + | NBPF19 | 1 | + |
| exon-intron | RPL23AP53 | 8 | - | CLASP1 | 2 | - |
| exon-intron | FZD6 | 8 | - | NT5DC1 | 6 | + |
| exon-exon | ADAMTS4 | 1 | + | ADAMTS4 | 1 | - |
| exon-exon | PLEKHA4 | 19 | - | ND5 | MT | + |
| exon-exon | SH3BGRL3 | 1 | - | DYNLL2 | 17 | + |
| intron-exon | EMSY | 11 | - | RNA45SN1 | 21 | - |
| exon-exon | LOC112268284 | 21 | - | RNA45SN3 | 21 | - |
| exon-exon | HSPA9 | 5 | + | EIF5B | 2 | + |
| exon-exon | UBXN4 | 2 | + | ACTB | 7 | + |
| intron-exon | NCOA6 | 20 | + | TALAM1 | 11 | - |
| exon-exon | FLOT2 | 17 | + | FLOT2 | 17 | - |
| exon-exon | SLC1A5 | 19 | - | P3H2 | 3 | + |
| exon-exon | ND2 | MT | - | HNRNPH1 | 5 | - |
| exon-exon | ST13 | 22 | - | MTREX | 5 | + |
| exon-exon | GPX3 | 5 | + | S100A8 | 1 | + |
| exon-exon | PEMT | 17 | + | PEMT | 17 | - |
| exon-intron | FOXM1 | 12 | - | PCBP1-AS1 | 2 | + |
| exon-intron | SAMD9L | 7 | + | DEPDC1-AS1 | 1 | + |
| exon-exon | ATP6V1E1 | 22 | - | IL1RN | 2 | - |
| exon-exon | SLC50A1 | 1 | + | SNHG1 | 11 | + |
| exon-exon | NOP56 | 20 | + | PA2G4 | 12 | + |
| exon-exon | TPM3 | 1 | + | MRPL9 | 1 | - |
| intron-exon | SCAF8 | 6 | - | ARF3 | 12 | - |
| exon-exon | AAAS | 12 | - | MAOB | X | - |
| intron-exon | GAB1 | 4 | - | OXLD1 | 17 | + |
| exon-intron | ZNF217 | 20 | - | TAOK1 | 17 | + |
| intron-exon | CDC27 | 17 | - | PIAS2 | 18 | - |
| intron-exon | CPM | 12 | - | MALAT1 | 11 | - |
| exon-exon | EI24 | 11 | + | RUVBL1 | 3 | - |
| intron-exon | TPST2 | 22 | - | ROCK2 | 2 | + |
| exon-intron | TEAD1 | 11 | - | LINC02615 | 4 | + |
| exon-exon | SLU7 | 5 | + | JCHAIN | 4 | + |
| exon-exon | FAM50A | X | - | FAM50A | X | + |
| intron-exon | ATL2 | 2 | + | LAPTM4B | 8 | - |
| exon-intron | COX2 | MT | + | LONP2 | 16 | - |
| exon-exon | RNA45SN2 | 21 | - | HSP90AA1 | 14 | + |
| exon-exon | H3P6 | 2 | - | FGF2 | 4 | - |
| exon-exon | PHF8 | X | + | PHF8 | X | - |
| exon-exon | HMGCL | 1 | - | ACTB | 7 | - |
| exon-exon | PKD1P5-LOC105376752 | 16 | + | NPIPA5 | 16 | - |
| exon-exon | KCTD1 | 18 | - | HSP90AA2P | 11 | - |
| exon-intron | SERPINB4 | 18 | - | WIPI1 | 17 | - |
| exon-exon | WARS1 | 14 | + | WARS1 | 14 | - |
| exon-exon | RPL4 | 15 | + | RPL4P4 | 3 | - |
| exon-exon | PPIA | 7 | - | TTC39C | 18 | - |
| exon-intron | MYL9 | 20 | + | DLGAP4-AS1 | 20 | - |
| exon-exon | KRT6B | 12 | + | KRT6A | 12 | - |
| exon-exon | COX3 | MT | - | SSH3 | 11 | - |
| exon-intron | DCDC2B | 1 | + | TMEM234 | 1 | - |
| exon-intron | LOC101928731 | 12 | - | CRADD | 12 | + |
| exon-exon | DDTL | 22 | + | DDTL | 22 | - |
| exon-exon | AGBL5 | 2 | + | PFAS | 17 | + |
| exon-exon | TCOF1 | 5 | - | ND2 | MT | - |
| exon-exon | ERLIN1 | 10 | - | COX3 | MT | + |
| intron-exon | COBL | 7 | + | CPLANE1 | 5 | + |
| exon-intron | G3BP1 | 5 | + | MCMBP | 10 | + |
| exon-intron | IDS | X | - | HDAC9 | 7 | + |
| intron-exon | ATP2A2 | 12 | - | ABHD3 | 18 | - |
| exon-intron | LYST | 1 | - | SCGB1B2P | 19 | - |
| exon-exon | CDK6 | 7 | + | XRCC1 | 19 | + |
| exon-exon | CNNM3 | 2 | - | CNNM3 | 2 | + |
| exon-exon | RNA45SN3 | 21 | - | RNA45SN3 | 21 | + |
| exon-exon | SMIM22 | 16 | - | ARFIP2 | 11 | + |
| exon-intron | HMOX2 | 16 | - | SH2B1 | 16 | - |
| exon-intron | MBOAT2 | 2 | + | SNX8 | 7 | + |
| exon-intron | UMPS | 3 | - | EVC | 4 | - |
| exon-exon | SCAF4 | 21 | + | RPLP0 | 12 | - |
| exon-exon | ND2 | MT | + | ND5 | MT | + |
| exon-exon | SMTN | 22 | - | RNA45SN2 | 21 | - |
| exon-exon | TAGLN | 11 | + | F8A1 | X | + |
| exon-exon | IRF6 | 1 | - | SEC62 | 3 | - |
| exon-exon | TSC22D3 | X | - | RHOBTB2 | 8 | + |
| intron-exon | AHDC1 | 1 | - | ACTA2 | 10 | + |
| exon-exon | HLA-A | 6 | - | MEF2C | 5 | + |
| intron-exon | IGHG3 | 14 | - | IGHG3 | 14 | + |
| exon-exon | RABGAP1 | 9 | + | RABGAP1 | 9 | - |
| intron-exon | LOC107986665 | 6 | + | LOC105378093 | 6 | + |
| intron-exon | LOC105376384 | 10 | + | DCLRE1C | 10 | - |
| intron-exon | USP34 | 2 | + | CCT6A | 7 | - |
| exon-intron | DCLRE1C | 10 | + | LOC105376384 | 10 | - |
| exon-intron | TALAM1 | 11 | - | DENND1A | 9 | + |
| intron-exon | SPTBN2 | 11 | - | KLHDC10 | 7 | - |
| intron-exon | NAA25 | 12 | - | FMR1 | X | + |
| intron-exon | RNA28SP | 21 | - | RNA45SN2 | 21 | - |
| exon-exon | RNF214 | 11 | + | TSN | 2 | + |
| exon-exon | MALAT1 | 11 | + | SPG21 | 15 | + |
| intron-exon | ZZZ3 | 1 | - | MCL1 | 1 | - |
| exon-intron | CPSF2 | 14 | - | SLMAP | 3 | - |
| exon-intron | RNA45SN1 | 21 | + | PDE10A | 6 | + |
| intron-exon | PTPRG | 3 | + | PRPF4B | 6 | - |
| exon-exon | LOC105373195 | X | - | ADPGK | 15 | + |
| exon-exon | PIGS | | - | ATP6 | MT | - |
| intron-exon | LCORL | 4 | + | MMGT1 | X | - |
| intron-exon | MGA | 15 | - | SEC63 | 6 | - |
| exon-exon | KCMF1 | 2 | - | KCMF1 | 2 | + |
| intron-exon | GAPVD1 | 9 | + | RPS12 | 6 | + |
| exon-intron | RDH11 | 14 | - | SUCLG2 | 3 | - |
| exon-intron | TMED10 | 14 | + | RBBP4 | 1 | + |
| exon-exon | COX2 | MT | - | COX2 | MT | + |
| intron-exon | ZZZ3 | 1 | + | CD47 | 3 | - |
| exon-intron | MPHOSPH9 | 12 | - | MRRF | 9 | + |
| exon-exon | TTC3 | 21 | - | TTC3 | 21 | + |
| exon-exon | MSH6 | 2 | - | MSH6 | 2 | + |
| exon-exon | ECPAS | 9 | + | ECPAS | 9 | - |
| exon-intron | OGA | 10 | + | ATP6V1H | 8 | - |
| intron-exon | H2BC19P | 1 | + | H2BC20P | 1 | + |
| exon-intron | H2BC20P | 1 | - | H2BC19P | 1 | - |
| exon-intron | IAH1 | 2 | + | TRG | 7 | - |
| exon-intron | NAMPT | 7 | - | RPL23AP53 | 8 | - |
| intron-exon | BIRC6 | 2 | + | MAVS | 20 | - |
| exon-intron | RPL13 | 16 | + | DIP2B | 12 | + |
| intron-exon | IGFBP7 | 4 | - | MUC4 | 3 | - |
| intron-exon | CARD14 | 17 | - | STK4 | 20 | - |
| exon-intron | MLLT6 | 17 | + | PTK2 | 8 | - |
| intron-exon | ZNF800 | 7 | + | TANK | 2 | - |
| exon-intron | FTO | 16 | - | MARF1 | 16 | + |
| intron-exon | IFT88 | 13 | + | LOC102724851 | 6 | + |
| intron-exon | SMG1P4 | 16 | - | NEAT1 | 11 | + |
| exon-exon | ARHGAP21 | 10 | + | ARHGAP21 | 10 | - |
| intron-exon | AC009120.6 | 16 | + | LOC283922 | 16 | + |
| exon-intron | ACSBG1 | 15 | - | TSHZ2 | 20 | + |
| exon-exon | MALAT1 | 11 | - | ND4L | MT | + |
| exon-exon | AQR | 15 | + | ND4L | MT | + |
| exon-exon | CHMP2B | 3 | - | MGAM2 | 7 | + |
| exon-intron | ATP6 | MT | - | CLIC4 | 1 | + |
| exon-exon | ND4L | MT | - | KIAA0319L | 1 | - |
| exon-exon | MYL12A | 18 | + | COX1 | MT | + |
| exon-intron | RFX7 | 15 | + | STYXL1 | 7 | - |
| exon-intron | NEAT1 | 11 | - | RUFY3 | 4 | - |
| intron-exon | P2RY8 | X | + | GINS4 | 8 | + |
| exon-intron | NSRP1 | 17 | - | FAM193A | 4 | + |
| exon-intron | RREB1 | 6 | + | AGBL4 | 1 | - |
| exon-intron | BHLHE40 | 3 | - | BHLHE40 | 3 | + |
| exon-exon | PDZD8 | 10 | + | PDZD8 | 10 | - |
| intron-exon | TP53BP1 | 15 | - | TUBGCP4 | 15 | + |
| exon-intron | SH3D19 | 4 | - | KIAA1217 | 10 | + |
| exon-intron | TMC5 | 16 | - | NLRC5 | 16 | + |
| exon-exon | DNAJC7 | 17 | - | ARID4B | 1 | - |
| intron-exon | COL10A1 | 6 | - | WDR43 | 2 | - |
| exon-exon | RALGAPA2 | 20 | + | RFX5 | 1 | - |
| exon-exon | MGAM2 | 7 | + | MGAM2 | 7 | - |
| intron-exon | CZ1P-ASNS | 7 | - | ZNF320 | 19 | - |
| exon-exon | TRIM14 | 9 | - | TRIM14 | 9 | + |
| exon-exon | MFSD1 | 3 | + | SFRP4 | 7 | - |
| exon-intron | MDM2 | 12 | + | ZMYM4 | 1 | + |
| exon-exon | RPS4XP5 | 2 | - | RPS4XP5 | 2 | + |
| exon-intron | MAPK7 | 17 | - | FTH1P10 | 5 | - |
| exon-intron | NUDT4P2 | 1 | + | CD247 | 1 | + |
| exon-intron | TMOD3 | 15 | - | PJA2 | 5 | - |
| exon-exon | ATP6 | MT | - | PIGR | 1 | - |
| exon-exon | CTSZ | 20 | + | TNS2 | 12 | + |
| exon-exon | APOL3 | 22 | - | COL6A3 | 2 | + |
| intron-exon | CCSER2 | 10 | + | TARDBP | 1 | + |
| exon-intron | TRAF3IP1 | 2 | + | PPP1R9A | 7 | + |
| exon-intron | THRAP3 | 1 | + | RBPJ | 4 | + |
| exon-intron | AIF1 | 6 | - | LOC112268148 | 15 | + |
| exon-exon | CDK5RAP3 | 17 | - | NCAPD3 | 11 | - |
| intron-exon | ND6 | MT | + | POLR3F | 20 | + |
| exon-intron | ATP6 | MT | + | FMNL2 | 2 | + |
| exon-exon | ND5 | MT | + | TOMM20 | 1 | - |
| exon-intron | FGD5 | 3 | - | CAB39 | 2 | + |
| exon-exon | CHTOP | 1 | - | ND4 | MT | - |
| exon-exon | IER2 | 19 | - | ATP6 | MT | - |
| exon-intron | TALAM1 | 11 | - | AMZ1 | 7 | + |
| exon-intron | NFKBIA | 14 | + | RFC5 | 12 | - |
| intron-exon | MTND2P28 | 1 | + | SEPTIN11 | 4 | + |
| exon-intron | NFKBIA | 14 | + | SLC26A11 | 17 | - |
| intron-exon | IGKC | 2 | + | ARID5A | 2 | + |
| exon-intron | ND4 | MT | - | MTND2P28 | 1 | + |
| exon-exon | ATP6 | MT | - | AGRN | 1 | + |
| exon-exon | ATP6 | MT | - | ATP6 | MT | + |
| exon-exon | ND2 | MT | - | CTHRC1 | 8 | + |
| intron-exon | TLK1 | 2 | + | RPL4 | 15 | + |
| exon-intron | ND4 | MT | - | FTX | X | - |
| exon-exon | HSP90AA1 | 14 | + | MAML1 | 5 | + |
| exon-exon | ND4 | MT | - | MBTPS1 | 16 | - |
| exon-exon | COX1 | MT | - | COX1 | MT | + |
| exon-exon | HLA-DRB5 | 6 | + | HLA-DRB5 | 6 | - |
| intron-exon | FAT3 | 11 | - | ND4 | MT | + |
| exon-intron | CD96 | 3 | - | ZMAT4 | 8 | - |
| exon-intron | UCN2 | 3 | + | MAPK1 | 22 | + |
| exon-exon | USP25 | 21 | + | USP25 | 21 | - |
| exon-intron | AIFM1 | X | - | RAB33A | X | + |
| exon-intron | ND6 | MT | + | TOX3 | 16 | - |
| exon-intron | ST13 | 22 | + | MIR3681HG | 2 | - |
| exon-exon | ST13P7 | 7 | - | ST13 | 22 | - |
| intron-exon | LOC105372561 | 20 | - | ST13 | 22 | - |
| exon-exon | TYK2 | 19 | - | SHISA4 | 1 | + |
| exon-intron | TET1 | 10 | - | RPRD2 | 1 | + |
| intron-exon | BLVRB | 19 | + | TPT1 | 13 | - |
| exon-exon | HCFC1 | X | + | HCFC1 | X | - |
| intron-exon | TP53BP1 | 15 | + | SLC30A4 | 15 | - |
| intron-exon | TP53BP1 | 15 | + | SLC30A4 | 15 | - |
| exon-intron | HTATSF1 | X | - | RNR1 | MT | - |
| exon-intron | ND6 | MT | + | UBE2H | 7 | - |
| intron-exon | TSEN15 | 1 | - | LOC102724830 | 1 | + |
| exon-intron | JUN | 1 | + | LARP1B | 4 | + |
| intron-exon | FNDC3A | 13 | - | LINC01590 | 6 | - |
| exon-intron | ND5 | MT | - | RNR2 | MT | - |
| exon-exon | KNL1 | 15 | - | NAP1L1 | 12 | - |
| intron-exon | ZNF398 | 7 | - | RNF187 | 1 | + |
| intron-exon | LOC105377340 | 4 | + | SOD2 | 6 | + |
| exon-exon | SSR3 | 3 | + | KCNAB1 | 3 | + |
| exon-exon | ZNF587 | 19 | - | ZSCAN4 | 19 | - |
| exon-exon | AIF1 | 6 | + | TMED5 | 1 | - |
| intron-exon | DRG2 | 17 | + | ND3 | MT | + |
| exon-intron | THY1 | 11 | - | COP1 | 1 | - |
| exon-intron | LOC105378179 | 14 | - | AC016590.1 | 19 | - |
| intron-exon | TRIO | 5 | + | GLG1 | 16 | - |
| exon-exon | GJB2 | 13 | - | NCSTN | 1 | - |
| exon-exon | ND2 | MT | - | TPM1 | 15 | + |
| exon-exon | CD74 | 5 | - | RNA5S7 | 1 | + |
| exon-exon | BGN | X | - | BGN | X | + |
| exon-intron | GANAB | 11 | + | PPP1R14C | 6 | - |
| intron-exon | HDHD2 | 18 | + | TXNIP | 1 | + |
| exon-exon | PGM3 | 6 | - | SUCO | 1 | - |
| intron-exon | PSG8 | 19 | + | RBM39 | 20 | + |
| exon-exon | ZSCAN25 | 7 | + | ZSCAN25 | 7 | - |
| exon-exon | ZFR | 5 | - | C18orf25 | 18 | - |
| exon-exon | GLCE | 15 | + | GLCE | 15 | - |
| exon-intron | CDKL1 | 14 | - | TNS3 | 7 | + |
| exon-exon | RPL14 | 3 | - | ATP6 | MT | - |
| exon-exon | DACT1 | 14 | + | COL1A1 | 17 | + |
| exon-exon | MTR | 1 | + | CCAR1 | 10 | - |
| intron-exon | LOC112268098 | 12 | + | PERP | 6 | - |
| exon-exon | HK1 | 10 | - | HK1 | 10 | + |
| intron-exon | OGDH | 7 | - | RNA45SN2 | 21 | + |
| exon-exon | GRN | 17 | - | HIPK1 | 1 | - |
| exon-intron | LOC105369352 | 11 | - | KLC2 | 11 | - |
| exon-exon | DVL3 | 3 | - | PKP4 | 2 | + |
| intron-exon | LOC105375368 | 7 | - | ND4L | MT | + |
| exon-exon | FLNB | 3 | - | FLNB | 3 | + |
| exon-exon | ITPRID2 | 2 | + | ITPRID2 | 2 | - |
| exon-exon | TRAPPC9 | 8 | - | EGFR | 7 | + |
| exon-exon | GCNT3 | 15 | - | HSP90B1 | 12 | - |
| intron-exon | ST3GAL4 | 11 | + | CAMK2G | 10 | + |
| exon-exon | ND2 | MT | - | ND2 | MT | + |
| exon-exon | NAPRT | 8 | + | NAPRT | 8 | - |
| exon-exon | TSPAN13 | 7 | - | RNF130 | 5 | - |
| exon-intron | ND2 | MT | - | CBR4 | 4 | - |
| intron-exon | RNA28SP | 21 | - | METTL2A | 17 | + |
| exon-intron | HLA-A | 6 | + | RNF130 | 5 | + |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN1 | 21 | + |
| exon-exon | CDH1 | 16 | + | CDH1 | 16 | - |
| exon-exon | SPTAN1 | 9 | - | CRAT | 9 | + |
| exon-exon | ND4 | MT | - | ND5 | MT | - |
| intron-exon | LOC729732 | 8 | + | WIPI1 | 17 | - |
| exon-exon | SMNDC1 | 10 | + | DAZAP2 | 12 | + |
| exon-exon | CNOT11 | 2 | + | CNOT11 | 2 | - |
| exon-exon | FTH1 | 11 | - | ND4 | MT | + |
| exon-exon | IGHM | 14 | + | NSD3 | 8 | - |
| exon-exon | LOC107986003 | 2 | - | ASB1 | 2 | + |
| intron-exon | RARS1 | 5 | - | ARFGEF2 | 20 | - |
| intron-exon | SLCO2A1 | 3 | + | RREB1 | 6 | + |
| intron-exon | SGPP2 | 2 | - | FAM13A | 4 | + |
| intron-exon | BCKDHA | 19 | + | CEACAM5 | 19 | + |
| exon-intron | AARS2 | 6 | - | RETSAT | 2 | + |
| exon-exon | LILRA6 | 19 | + | CALR | 19 | + |
| exon-exon | ND5 | MT | + | ND4 | MT | + |
| exon-exon | ARID1A | 1 | - | ARID1A | 1 | + |
| exon-exon | CKB | 14 | + | LSM14B | 20 | + |
| exon-exon | STAT6 | 12 | + | STAT6 | 12 | - |
| exon-intron | ND1 | MT | - | RBPMS | 8 | + |
| intron-exon | ERBB2 | 17 | - | KDM7A | 7 | - |
| exon-exon | GRN | 17 | - | GRN | 17 | + |
| exon-exon | GSS | 20 | + | OASL | 12 | - |
| exon-intron | ND2 | MT | - | MTND2P28 | 1 | + |
| intron-exon | ZNF624 | 17 | - | NCOR1 | 17 | - |
| exon-intron | PPP6R1 | 19 | + | CBLC | 19 | + |
| exon-exon | ND2 | MT | + | ND1 | MT | + |
| intron-exon | SCOC-AS1 | 4 | - | ND2 | MT | + |
| exon-intron | CCDC14 | 3 | + | KIAA0319L | 1 | - |
| intron-exon | INS-IGF2 | 11 | + | INS-IGF2 | 11 | - |
| exon-exon | COX3 | MT | - | HNRNPA1 | 12 | + |
| intron-exon | SLC24A2 | 9 | - | RPS6 | 9 | - |
| exon-intron | DUSP2 | 2 | + | SLC9A3 | 5 | + |
| intron-exon | NUDC | 1 | - | PLBD1 | 12 | - |
| exon-intron | MUC20 | 3 | - | PON2 | 7 | - |
| intron-exon | LCOR | 10 | - | FAM111A | 11 | + |
| intron-exon | LPCAT3 | 12 | + | EVX1 | 7 | - |
| exon-intron | MNT | 17 | + | PAFAH1B1 | 17 | + |
| intron-exon | SPI1 | 11 | - | SLC39A13 | 11 | - |
| exon-intron | LRRFIP1 | 2 | - | KIAA0319L | 1 | - |
| exon-exon | NEAT1 | 11 | + | DPY19L4 | 8 | - |
| exon-exon | ND4 | MT | - | SLC39A9 | 14 | + |
| exon-intron | ATP5F1B | 12 | - | LOC107987100 | 9 | - |
| exon-exon | TPR | 1 | + | SRSF10 | 1 | + |
| intron-exon | CATSPERB | 14 | + | SLC35C2 | 20 | - |
| exon-exon | RPL14 | 3 | - | SRP14 | 15 | - |
| intron-exon | NFX1 | 9 | + | C1S | 12 | - |
| exon-intron | HNRNPA2B1 | 7 | - | EPB41L1 | 20 | + |
| exon-intron | CEBPZOS | 2 | + | SH3D19 | 4 | - |
| exon-intron | ND6 | MT | - | GAS2L3 | 12 | + |
| intron-exon | GCNT3 | 15 | - | HNRNPA1 | 12 | - |
| exon-intron | TFRC | 3 | - | LOC112268430 | 2 | + |
| intron-exon | PARG | 10 | - | HUWE1 | X | + |
| exon-intron | FOXO3 | 6 | + | ZNF286B | 17 | - |
| exon-intron | GOLGA4 | 3 | - | ZNF428 | 19 | + |
| intron-exon | BAZ1B | 7 | + | LINC01004 | 7 | - |
| exon-exon | CCNB1 | 5 | - | CCDC84 | 11 | + |
| intron-exon | FXR1 | 3 | + | NEAT1 | 11 | + |
| intron-exon | LOC105371084 | 16 | + | GSPT1 | 16 | - |
| intron-exon | MIR570HG | 3 | - | MFAP1 | 15 | - |
| exon-intron | GPSM2 | 1 | + | SRSF11 | 1 | - |
| exon-exon | PERP | 6 | - | SLC2A1 | 1 | - |
| exon-exon | CTTN | 11 | + | CTTN | 11 | - |
| exon-intron | CWF19L2 | 11 | + | CDK8 | 13 | - |
| exon-exon | PDIA3 | 15 | - | EIF4E | 4 | + |
| exon-exon | ATP6 | MT | - | ND5 | MT | - |
| exon-exon | C16orf87 | 16 | + | MPZL1 | 1 | - |
| intron-exon | SELENOI | 2 | - | CBLC | 19 | + |
| exon-exon | PYGL | 14 | - | COL1A1 | 17 | + |
| exon-exon | COX3 | MT | + | COX1 | MT | + |
| exon-intron | KHDC4 | 1 | - | KHDC4 | 1 | + |
| exon-exon | FLJ23867 | 1 | - | FLJ23867 | 1 | + |
| exon-exon | FLJ23867 | 1 | - | FLJ23867 | 1 | + |
| exon-intron | ST7-AS2 | 7 | - | ST7 | 7 | + |
| exon-intron | GOLM2 | 15 | - | SIRT5 | 6 | + |
| intron-exon | RNF220 | 1 | + | CTSZ | 20 | + |
| exon-exon | EIF4G1 | 3 | + | TPM2 | 9 | - |
| exon-exon | CDH17 | 8 | - | CDH17 | 8 | + |
| intron-exon | DIP2C | 10 | + | PATJ | 1 | - |
| exon-intron | RNH1 | 11 | - | TRPM4 | 19 | + |
| intron-exon | LOC105371763 | 17 | + | IFNAR1 | 21 | - |
| intron-exon | RNR2 | MT | - | PKM | 15 | - |
| exon-exon | ND4 | MT | - | TERF1 | 8 | + |
| intron-exon | RAB6A | 11 | + | HK2 | 2 | + |
| exon-exon | CD74 | 5 | + | RPL29 | 3 | - |
| exon-exon | SEC22B | 1 | - | ANKRD10 | 13 | + |
| exon-intron | HIF3A | 19 | - | HIF3A | 19 | + |
| exon-intron | FAM227B | 15 | - | CRKL | 22 | + |
| exon-exon | PAK1 | 11 | + | TSTD2 | 9 | - |
| intron-exon | SYNE2 | 14 | - | SLC37A1 | 21 | + |
| intron-exon | SMAD3 | 15 | - | CYTB | MT | - |
| exon-intron | TOP1MT | 8 | + | SND1 | 7 | + |
| intron-exon | NPIPB3 | 16 | + | NPIPB4 | 16 | - |
| exon-intron | SNX13 | 7 | + | CUL4A | 13 | + |
| intron-exon | ADGRE3 | 19 | - | MALAT1 | 11 | + |
| exon-intron | MDM2 | 12 | + | RPS29 | 14 | - |
| exon-intron | LAMA5 | 20 | + | SCNN1A | 12 | - |
| intron-exon | AGBL4 | 1 | + | COL1A1 | 17 | - |
| exon-intron | TANGO6 | 16 | + | ARHGAP26 | 5 | - |
| exon-intron | RMDN3 | 15 | + | PLD1 | 3 | + |
| exon-intron | DOCK10 | 2 | - | MTCO1P12 | 1 | - |
| exon-intron | PTGES2 | 9 | - | MTATP6P1 | 1 | + |
| exon-exon | PGC | 6 | + | PGC | 6 | - |
| exon-intron | RNA45SN1 | 21 | - | LOC112268284 | 21 | - |
| exon-exon | MUC5AC | 11 | + | MUC6 | 11 | - |
| exon-exon | TALAM1 | 11 | - | TPM1 | 15 | - |
| exon-intron | MALAT1 | 11 | - | STK3 | 8 | - |
| exon-intron | RN7SL396P | 8 | - | SRGAP1 | 12 | - |
| intron-exon | BRD1 | 22 | - | RSRP1 | 1 | - |
| exon-exon | ND2 | MT | - | ND2 | MT | + |
| exon-intron | ATP6 | MT | - | MTATP6P1 | 1 | + |
| exon-intron | RNA45SN3 | 21 | + | HFM1 | 1 | + |
| exon-exon | SUPT7L | 2 | + | SUPT7L | 2 | - |
| exon-exon | PGA4 | 11 | - | CALD1 | 7 | + |
| intron-exon | FBXW2 | 9 | + | C1R | 12 | - |
| exon-intron | KMT2C | 7 | + | CLCN5 | X | + |
| exon-exon | ADPGK-AS1 | 15 | + | ND4 | MT | - |
| exon-intron | ABCB10 | 1 | - | LOC101927829 | 3 | + |
| intron-exon | FIS1 | 7 | + | SIN3A | 15 | + |
| exon-exon | RNA45SN2 | 21 | - | PGA3 | 11 | + |
| exon-intron | MUC6 | 11 | - | FCGRT | 19 | - |
| exon-intron | COX2 | MT | + | GRB2 | 17 | - |
| exon-exon | KMT5B | 11 | + | MARK3 | 14 | + |
| intron-exon | GRB2 | 17 | + | COX2 | MT | - |
| exon-exon | CLIP1 | 12 | - | APEX1 | 14 | + |
| exon-exon | SURF4 | 9 | - | SURF4 | 9 | + |
| exon-intron | ND4 | MT | + | IGH | 14 | - |
| intron-exon | LOC103171574 | 15 | + | SPARC | 5 | + |
| exon-exon | RNA45SN3 | 21 | - | RNA45SN2 | 21 | - |
| exon-intron | CNPY3 | 6 | - | IGH | 14 | - |
| exon-exon | COX1 | MT | + | ND4 | MT | + |
| exon-exon | IGHA1 | 14 | + | LMO7 | 13 | - |
| exon-exon | CALM3 | 19 | + | MSN | X | - |
| exon-intron | PYROXD1 | 12 | + | GOLGA4 | 3 | - |
| exon-exon | GFPT2 | 5 | + | GFPT2 | 5 | - |
| intron-exon | STK3 | 8 | + | MRTFA | 22 | - |
| intron-exon | ARHGEF7 | 13 | - | ZNF512 | 2 | + |
| intron-exon | PCNX1 | 14 | + | FANCD2 | 3 | + |
| exon-exon | DUSP5 | 10 | + | RAP2B | 3 | + |
| intron-exon | INSL6 | 9 | - | ATMIN | 16 | + |
| intron-exon | FBRSL1 | 12 | + | LIPF | 10 | + |
| exon-exon | PGA5 | 11 | - | PGA3 | 11 | - |
| intron-exon | RNA18SP5 | 21 | - | RNA45SN2 | 21 | - |
| exon-exon | B2M | 15 | - | RPS6KB1 | 17 | + |
| intron-exon | LINC02614 | 3 | - | COL6A3 | 2 | - |
| intron-exon | CDK6 | 7 | - | PEX19 | 1 | + |
| intron-exon | POU2F1 | 1 | - | TMEM62 | 15 | + |
| intron-exon | NUP210 | 3 | - | PGA3 | 11 | + |
| exon-exon | KDM3A | 2 | - | MLYCD | 16 | + |
| exon-exon | PGA5 | 11 | - | PGA3 | 11 | + |
| exon-exon | NPTN | 15 | - | LOC643387 | 2 | + |
| exon-exon | PGC | 6 | + | PGC | 6 | - |
| exon-exon | RPS6 | 9 | + | RNA45SN1 | 21 | - |
| exon-exon | PDCD4 | 10 | + | PDCD4 | 10 | - |
| exon-exon | TLE5 | 19 | + | ENGASE | 17 | - |
| exon-exon | RPS19 | 19 | - | CREG1 | 1 | - |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN2 | 21 | - |
| intron-exon | TMEM87A | 15 | - | LOC105370795 | 15 | - |
| exon-exon | AMYP1 | 1 | - | AMY1A | 1 | - |
| intron-exon | SCAF4 | 21 | - | RSL1D1 | 16 | + |
| exon-exon | SSC4D | 7 | + | ZP3 | 7 | + |
| exon-exon | SEL1L3 | 4 | + | SGPL1 | 10 | - |
| intron-exon | AC019077.1 | 4 | + | RAP1GDS1 | 4 | + |
| exon-exon | EEF2 | 19 | + | PEX14 | 1 | - |
| exon-exon | MSH6 | 2 | - | MSH6 | 2 | + |
| intron-exon | KLHL21 | 1 | + | KLHL21 | 1 | - |
| exon-intron | GLG1 | 16 | - | LOC107984827 | 16 | - |
| exon-intron | GLG1 | 16 | - | LOC107984827 | 16 | - |
| exon-intron | RNA45SN1 | 21 | - | MTND2P28 | 1 | + |
| exon-exon | TOP2B | 3 | - | TOP2B | 3 | + |
| intron-exon | SSH2 | 17 | + | NEAT1 | 11 | + |
| exon-exon | CBR4 | 4 | + | RNA45SN2 | 21 | + |
| exon-exon | HNRNPL | 19 | - | UBE3C | 7 | - |
| intron-exon | RNA28SP | 21 | - | RNA45SN3 | 21 | + |
| exon-exon | RNA45SN3 | 21 | - | RNA45SN2 | 21 | + |
| intron-exon | RPL23 | 17 | + | RPL23 | 17 | - |
| exon-exon | ND5 | MT | + | ND4 | MT | + |
| exon-exon | COX1 | MT | + | RNA45SN2 | 21 | - |
| exon-exon | ATP6 | MT | - | ATP6 | MT | + |
| intron-exon | RNA28SP | 21 | + | RNA45SN1 | 21 | + |
| intron-exon | BTD | 3 | + | RN7SL4P | 3 | + |
| intron-exon | RN7SL70P | 19 | - | LOC107987206 | 14 | + |
| exon-exon | SF3A3 | 1 | + | SF3A3 | 1 | - |
| exon-exon | DAXX | 6 | + | DAXX | 6 | - |
| exon-exon | LOC105378179 | 14 | - | RN7SL3 | 14 | - |
| exon-exon | NRP2 | 2 | + | TUBA1B | 12 | + |
| exon-exon | COX3 | MT | - | INS-IGF2 | 11 | + |
| exon-intron | INS-IGF2 | 11 | + | LOC102725148 | 18 | + |
| intron-exon | OGT | X | + | FOXD2 | 1 | + |
| exon-exon | PPP2R2A | 8 | + | PPP2R2A | 8 | - |
| exon-exon | ATP1B3 | 3 | - | ATP1B3 | 3 | + |
| exon-intron | ATP6 | MT | - | RNR2 | MT | - |
| exon-exon | SEC61A1 | 3 | + | ND1 | MT | + |
| intron-exon | PATJ | 1 | + | CRYBG3 | 3 | - |
| exon-exon | RNA45SN1 | 21 | - | FABP1 | 2 | + |
| exon-intron | EFCAB12 | 3 | + | MRPS7 | 17 | - |
| exon-exon | HLA-K | 6 | + | HLA-A | 6 | + |
| exon-intron | LOC107987206 | 14 | + | HNRNPUL1 | 19 | + |
| intron-exon | ADAMTS17 | 15 | + | CYTB | MT | + |
| exon-exon | DELE1 | 5 | - | DELE1 | 5 | + |
| exon-exon | ZNF814 | 19 | + | ZNF417 | 19 | + |
| exon-exon | IGHMBP2 | 11 | - | NSL1 | 1 | + |
| exon-exon | PTBP1 | 19 | - | PTBP1 | 19 | + |
| exon-exon | INS-IGF2 | 11 | + | INS-IGF2 | 11 | - |
| exon-exon | CALR | 19 | + | CALR | 19 | - |
| exon-exon | DNAJC5 | 20 | + | CBX3 | 7 | - |
| intron-exon | OPSIN-LCR | X | - | RNA45SN1 | 21 | + |
| intron-exon | GPR160 | 3 | - | C15orf40 | 15 | - |
| exon-intron | ACTB | 7 | - | TNRC18 | 7 | - |
| exon-exon | PFDN1 | 5 | - | PARVA | 11 | + |
| exon-exon | ENO1 | 1 | - | ENO1 | 1 | + |
| intron-exon | AMPD3 | 11 | + | PTMS | 12 | - |
| exon-exon | RPLP2P2 | 5 | - | LRRC32 | 11 | - |
| intron-exon | UBAC2 | 13 | + | TM9SF2 | 13 | + |
| exon-intron | COX1 | MT | + | RP11-146F11.5 | 16 | + |
| exon-intron | RN7SL3 | 14 | + | STYXL1 | 7 | + |
| intron-exon | RNR1 | MT | + | ND2 | MT | + |
| exon-exon | BAD | 11 | + | BAD | 11 | - |
| exon-exon | GATD3A | 21 | - | GATD3B | 21 | + |
| intron-exon | LOC107985786 | 2 | - | SEC16A | 9 | - |
| exon-exon | MARCHF9 | 12 | - | MARCHF9 | 12 | + |
| intron-exon | ZNF710 | 15 | + | PKM | 15 | - |
| exon-exon | MIF | 22 | + | RNA45SN3 | 21 | + |
| exon-exon | RNA45SN3 | 21 | + | BAP1 | 3 | - |
| exon-exon | RNA45SN2 | 21 | + | AP3D1 | 19 | + |
| intron-exon | MED13 | 17 | + | ZNF514 | 2 | + |
| intron-exon | SLX1B-SULT1A4 | 16 | - | SLX1A-SULT1A3 | 16 | + |
| exon-exon | CYTB | MT | + | ATP6 | MT | + |
| exon-exon | TAF15 | 17 | + | LOC105371744 | 17 | + |
| exon-exon | SLC39A7 | 6 | - | SLC39A7 | 6 | + |
| exon-exon | CD81 | 11 | - | SEL1L | 14 | + |
| exon-exon | CD81 | 11 | - | SEL1L | 14 | + |
| exon-intron | NPR3 | 5 | + | PRKCE | 2 | + |
| exon-exon | COX1 | MT | - | ZNF335 | 20 | + |
| exon-exon | H3C6 | 6 | + | H3C6 | 6 | - |
| exon-exon | SUOX | 12 | - | SUOX | 12 | + |
| exon-exon | FST | 5 | + | FST | 5 | - |
| exon-intron | TMEM94 | 17 | - | CMTM8 | 3 | + |
| exon-intron | GAPDH | 12 | + | LOC105370500 | 14 | + |
| intron-exon | FAF1 | 1 | - | CALM3 | 19 | + |
| exon-intron | SCAP | 3 | + | MYO5B | 18 | + |
| exon-exon | RBBP6 | 16 | + | RSF1 | 11 | - |
| exon-intron | SONP1 | 1 | - | HERC4 | 10 | + |
| exon-exon | MALAT1 | 11 | + | TALAM1 | 11 | - |
| intron-exon | ATXN10 | | + | KANK2 | 19 | - |
| exon-exon | BRD8 | 5 | - | CC2D2A | 4 | + |
| exon-intron | PEBP1 | 12 | - | YEATS2 | 3 | + |
| exon-exon | ND5 | MT | - | COX1 | MT | - |
| exon-exon | COX1 | MT | - | COX1 | MT | + |
| exon-exon | NFASC | 1 | - | GRAMD2B | 5 | - |
| exon-exon | GNG4 | 1 | - | SORBS1 | 10 | - |
| intron-exon | SLC39A6 | 18 | - | GLT1D1 | 12 | + |
| intron-exon | LOC107986356 | 5 | + | WNK1 | 12 | - |
| exon-intron | DDX24 | 14 | + | TMEM87A | 15 | - |
| intron-exon | SLC1A3 | 5 | + | IFITM1 | 11 | + |
| intron-exon | ZRANB3 | 2 | - | RAB3GAP1 | 2 | + |
| exon-intron | GAB1 | 4 | + | MAN2A1 | 5 | + |
| exon-exon | RPL4 | 15 | + | RPL4 | 15 | - |
| intron-exon | LOC107984244 | 10 | - | VCL | 10 | + |
| exon-exon | NAA60 | 16 | - | ND5 | MT | - |
| exon-exon | CDC42BPA | 1 | - | DCAF11 | 14 | - |
| intron-exon | CDK6 | 7 | + | KLC1 | 14 | - |
| exon-exon | NBPF19 | 1 | - | NBPF9 | 1 | - |
| intron-exon | LOC105372649 | 20 | + | SFSWAP | 12 | + |
| intron-exon | HSD17B11 | 4 | + | CEP57L1 | 6 | + |
| exon-exon | OAS1 | 12 | + | CCN1 | 1 | - |
| exon-exon | LINC00320 | 21 | - | TTLL5 | 14 | + |
| intron-exon | TM9SF4 | 20 | - | CRTC3 | 15 | + |
| intron-exon | OR2A1-AS1 | 7 | - | BEX4 | X | - |
| exon-exon | MAP1B | 5 | - | C4B | 6 | + |
| intron-exon | NFASC | 1 | - | CD177 | 19 | - |
| intron-exon | LOC100506282 | 11 | + | RAB21 | 12 | + |
| exon-intron | MAPK8IP3 | 16 | + | TNRC18 | 7 | + |
| intron-exon | XPC | 3 | - | LOC107986063 | 3 | + |
| exon-intron | AMOTL1 | 11 | + | WDPCP | 2 | - |
| exon-exon | TUBB | 6 | - | HSP90B1 | 12 | + |
| exon-intron | SILC1 | 2 | - | MROH7-TTC4 | 1 | + |
| exon-intron | LDLRAD3 | 11 | - | RNR2 | MT | - |
| exon-exon | ZNF587 | 19 | + | ZNF227 | 19 | + |
| exon-intron | NUDT21 | 16 | - | KIFBP | 10 | + |
| exon-exon | SRRM2 | 16 | - | SRRM2 | 16 | + |
| exon-exon | EIF4G2 | 11 | + | YWHAG | 7 | - |
| exon-intron | FYN | 6 | - | AHCYL2 | 7 | + |
| intron-exon | MAPK6-DT | 15 | + | CEP120 | 5 | + |
| exon-intron | EXOSC2 | 9 | + | COQ9 | 16 | + |
| exon-intron | HPRT1 | X | + | PRH1-PRR4 | 12 | + |
| exon-exon | COPG1 | 3 | - | CPM | 12 | - |
| intron-exon | MAN1A2 | 1 | - | ZNF271P | 18 | + |
| exon-exon | COTL1 | 16 | - | METTL7A | 12 | + |
| exon-exon | TRIM22 | 11 | + | MFAP1 | 15 | - |
| exon-intron | ARGLU1 | 13 | + | LPIN1 | 2 | + |
| intron-exon | ZNF322 | 6 | + | SLC39A9 | 14 | + |
| intron-exon | NID1 | 1 | + | ERCC6 | 10 | - |
| exon-exon | DPYSL2 | 8 | - | SPIN1 | 9 | + |
| exon-intron | TFDP2 | 3 | - | LOC100133091 | 7 | + |
| exon-intron | LOC339803 | 2 | + | ADAM17 | 2 | - |
| exon-intron | INPP5J | 22 | - | SMARCA4 | 19 | + |
| exon-intron | SF3B3 | 16 | + | LINC01578 | 15 | + |
| intron-exon | ADA2 | 22 | + | RNA45SN3 | 21 | - |
| exon-exon | RPS4X | X | - | RPS4X | X | + |
| intron-exon | POLR2J3 | 7 | - | SPDYE6 | 7 | - |
| intron-exon | PDE1C | 7 | - | ITPRID1 | 7 | + |
| exon-exon | ND4L | MT | - | ND4L | MT | + |
| intron-exon | SIK2 | 11 | + | RAB6A | 11 | + |
| exon-exon | ACOX1 | 17 | + | MYSM1 | 1 | + |
| exon-intron | IFIT1 | 10 | + | RIC1 | 9 | - |
| exon-exon | ND2 | MT | - | XPO7 | 8 | - |
| exon-intron | TALAM1 | 11 | - | PRKCA | 17 | - |
| exon-exon | TALAM1 | 11 | - | MALAT1 | 11 | + |
| exon-intron | RAB14 | 9 | - | UBP1 | 3 | - |
| exon-exon | HYKK | 15 | + | GMPS | 3 | + |
| exon-intron | ND1 | MT | + | TRNQ | MT | + |
| exon-intron | CAPG | 2 | + | RNR2 | MT | + |
| intron-exon | LINC00632 | X | + | MRPS25 | 3 | - |
| exon-intron | GNAS | 20 | - | PTPN11 | 12 | + |
| exon-exon | PTPRK | 6 | - | PTPRK | 6 | + |
| intron-exon | LOC107986022 | 3 | + | OGT | X | - |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN1 | 21 | - |
| exon-intron | ROBO1 | 3 | - | PDE4D | 5 | - |
| exon-intron | ZDHHC21 | 9 | + | PRDM2 | 1 | - |
| exon-intron | PDXDC1 | 16 | + | TUBGCP4 | 15 | + |
| exon-exon | LIX1L | 1 | - | PPP1R3C | 10 | + |
| intron-exon | ARSB | 5 | + | NOTCH2NLC | 1 | - |
| intron-exon | GRIK5 | 19 | - | MBP | 18 | - |
| intron-exon | RILPL1 | 12 | - | RNA45SN1 | 21 | + |
| intron-exon | ZEB2 | 2 | + | PLCG1 | 20 | - |
| exon-exon | MALAT1 | 11 | + | RNA45SN2 | 21 | + |
| intron-exon | PSD3 | 8 | + | SNHG14 | 15 | + |
| exon-exon | CELSR2 | 1 | + | CALM3 | 19 | - |
| exon-exon | BSN | 3 | - | NSG2 | 5 | - |
| exon-exon | ND2 | MT | + | ND4 | MT | + |
| exon-intron | BASP1 | 5 | + | ST3GAL2 | 16 | + |
| intron-exon | NDUFC2-KCTD14 | 11 | - | INTS4 | 11 | - |
| exon-intron | ND2 | MT | - | ANK2 | 4 | + |
| intron-exon | YES1 | 18 | - | GPATCH8 | 17 | - |
| intron-exon | MAML2 | 11 | + | MYO5A | 15 | + |
| exon-intron | RNA45SN1 | 21 | - | MTND2P28 | 1 | + |
| exon-exon | RNA45SN1 | 21 | - | RNA45SN1 | 21 | + |
| exon-intron | VSNL1 | 2 | - | KMT2E | 7 | + |
| intron-exon | LOC107985041 | 1 | + | TTLL7 | 1 | - |
| exon-exon | ARHGAP15 | 2 | + | FBXO2 | 1 | - |
| exon-exon | ND5 | MT | + | ND6 | MT | + |
| exon-intron | ND4 | MT | + | C12orf60 | 12 | - |
| exon-exon | ND2 | MT | - | RNA45SN3 | 21 | - |
| exon-intron | NUFIP2 | 17 | + | PHOSPHO2-KLHL23 | 2 | + |
| intron-exon | LINC01135 | 1 | - | CLINT1 | 5 | - |
| exon-exon | PCLO | 7 | + | PCLO | 7 | - |
| exon-exon | CPNE2 | 16 | + | CPNE2 | 16 | - |
| exon-intron | PSAP | 10 | - | SHC2 | 19 | - |
| exon-exon | ARRB1 | 11 | + | ARRB1 | 11 | - |
| exon-exon | RNA45SN1 | 21 | - | NEDD4L | 18 | + |
| intron-exon | CACNA1B | 9 | - | YWHAG | 7 | - |
| intron-exon | MTCO3P12 | 1 | + | COX3 | MT | - |
| intron-exon | DHRSX | Y | - | ZNF280D | 15 | - |
| exon-intron | CCDC91 | 12 | + | FRY | 13 | + |
| exon-exon | COX2 | MT | - | COX2 | MT | + |
| exon-exon | ND6 | MT | - | GTF2IP1 | 7 | - |
| intron-exon | MUC13 | 3 | - | CYTB | MT | - |
| intron-exon | FANCC | 9 | + | ACTB | 7 | - |
| exon-exon | ZFP62 | 5 | + | COX7B | X | - |
| exon-exon | KIF1C | 17 | - | GNAI3 | 1 | - |
| intron-exon | RNR2 | MT | + | ND4 | MT | + |
| exon-intron | MCAM | 11 | - | CELF2 | 10 | - |
| exon-intron | SEMA4B | 15 | + | CACNA1C | 12 | + |
| exon-intron | RNA45SN1 | 21 | - | ZIM2 | 19 | + |
| intron-exon | LOC105377506 | 4 | - | SEC61A1 | 3 | + |
| intron-exon | COX10 | 17 | + | CDRT1 | 17 | - |
| exon-exon | ND4 | MT | + | PPP3CA | 4 | + |
| exon-intron | ESYT2 | 7 | - | RNR2 | MT | + |
| exon-exon | COLGALT2 | 1 | + | MAP1B | 5 | - |
| intron-exon | HS6ST3 | 13 | + | MGAT4A | 2 | + |
| exon-intron | EML6 | 2 | + | TTC28-AS1 | 22 | + |
| intron-exon | CADM2 | 3 | - | ND4 | MT | - |
| intron-exon | SORCS2 | 4 | - | KIF1A | 2 | - |
| exon-intron | IDH2 | 15 | + | ARHGAP31 | 3 | - |
| intron-exon | SDK1 | 7 | - | SETD1A | 16 | + |
| exon-exon | TMEM94 | 17 | + | TMEM94 | 17 | - |
| exon-intron | ARHGEF12 | 11 | + | ANKRD29 | 18 | + |
| intron-exon | CACNG4 | 17 | + | DUS4L-BCAP29 | 7 | + |
| exon-intron | ND5 | MT | - | MAK | 6 | - |
| exon-intron | RNA45SN1 | 21 | - | LOC100130331 | 1 | + |
| exon-exon | ZNF514 | 2 | - | ZNF514 | 2 | + |
| exon-exon | P2RX7 | 12 | + | COQ9 | 16 | + |
| intron-exon | CAMK4 | 5 | - | TRPV3 | 17 | + |
| exon-intron | MIA3 | 1 | + | SLAIN1 | 13 | + |
| exon-intron | TADA2B | 4 | - | DPP6 | 7 | - |
| intron-exon | TNRC6B | 22 | + | CDH2 | 18 | - |
| exon-exon | PTGS1 | 9 | - | NDRG1 | 8 | + |
| exon-exon | NDUFB10 | 16 | + | SPOCK2 | 10 | - |
| exon-exon | ATP6 | MT | - | ND5 | MT | - |
| intron-exon | LOC100128253 | 12 | - | ACOX3 | 4 | + |
| exon-intron | HGS | 17 | - | TIMP2 | 17 | - |
| exon-intron | SERINC1 | 6 | + | AL591438.2 | 9 | + |
| intron-exon | ROR1 | 1 | + | SNAP25 | 20 | - |
| exon-exon | SPPL2A | 15 | + | SPPL2A | 15 | - |
| exon-exon | CLCN4 | X | - | CLCN4 | X | + |
| exon-exon | ND1 | MT | - | CALM1 | 14 | + |
| intron-exon | FBRSL1 | 12 | - | FAT1 | 4 | + |
| intron-exon | GTPBP6 | Y | - | GNA12 | 7 | - |
| exon-intron | SLC38A2 | 12 | + | CDC42BPA | 1 | + |
| exon-intron | ASB16 | 17 | + | NCKAP5 | 2 | + |
| exon-exon | ATP6 | MT | - | CNTN2 | 1 | + |
| exon-intron | ND1 | MT | - | EXT1 | 8 | + |
| exon-intron | SNAP25 | 20 | - | EHMT1 | 9 | - |
| exon-exon | DDN | 12 | + | ND2 | MT | - |
| intron-exon | CYP51A1-AS1 | 7 | + | ZNF251 | 8 | - |
| exon-exon | CACNA1G | 17 | - | TATDN2 | 3 | - |
| exon-intron | STK25 | 2 | + | PBX1 | 1 | - |
| exon-intron | LOC105378179 | 14 | + | RTN3 | 11 | + |
| exon-exon | FGF1 | 5 | + | VAMP2 | 17 | + |
| exon-exon | HNRNPA1 | 12 | + | TRAPPC13 | 5 | + |
| exon-intron | RNF38 | 9 | - | LOC105370165 | 13 | + |
| exon-exon | IGFBP5 | 2 | + | IGFBP5 | 2 | - |
| exon-intron | CTR9 | 11 | - | TAOK3 | 12 | - |
| intron-exon | RIC3 | 11 | - | CRKL | 22 | + |
| exon-exon | XIST | X | - | TALAM1 | 11 | - |
| exon-exon | HK1 | 10 | - | HK1 | 10 | + |
| exon-exon | TSPAN14 | 10 | - | YWHAH | 22 | - |
| exon-exon | ND4 | MT | - | MAP6 | 11 | - |
| exon-exon | ND4 | MT | - | MAP6 | 11 | - |
| intron-exon | PLCL1 | 2 | + | SLC35E3 | 12 | + |
| exon-exon | KIFC3 | 16 | + | ACTB | 7 | + |
| exon-exon | CCT7 | 2 | + | ND1 | MT | - |
| intron-exon | AC073896.1 | 12 | - | SYN2 | 3 | + |
| exon-intron | DAZAP2 | 12 | - | DPP10 | 2 | + |
| exon-intron | ND4 | MT | - | GLG1 | 16 | - |
| exon-exon | TSPAN14 | 10 | - | GNB2 | 7 | - |
| exon-exon | COX2 | MT | + | ND4 | MT | + |
| exon-exon | MEG3 | 14 | - | TUBA1B | 12 | - |
| exon-exon | ND1 | MT | - | CKMT1B | 15 | + |
| exon-exon | DHPS | 19 | + | DHPS | 19 | - |
| exon-exon | ND6 | MT | + | ND5 | MT | + |
| exon-intron | EFNA5 | 5 | + | RELL1 | 4 | - |
| exon-exon | OLFM4 | 13 | - | OLFM4 | 13 | + |
| exon-exon | CNKSR1 | 1 | - | CNKSR1 | 1 | + |
| intron-exon | LOC101929709 | 8 | - | SCRN3 | 2 | + |
| exon-exon | RIMKLB | 12 | + | PPIA | 7 | + |
| intron-exon | FARP2 | 2 | + | SMARCC1 | 3 | - |
| intron-exon | LCMT1 | 16 | + | ANKRD12 | 18 | - |
| exon-intron | TMEM50B | 21 | + | CD44 | 11 | + |
| exon-exon | ATP8 | MT | + | UBE2M | 19 | + |
| exon-exon | SFPQ | 1 | - | CTBP2 | 10 | - |
| intron-exon | MYO1E | 15 | - | SH3GLB1 | 1 | - |
| exon-exon | ND2 | MT | - | TAF15 | 17 | + |
| exon-intron | COX1 | MT | + | FNDC3B | 3 | + |
| exon-exon | MREG | 2 | + | ATP6 | MT | - |
| exon-intron | ND1 | MT | + | PHC3 | 3 | - |
| exon-intron | ATP6 | MT | + | TRPS1 | 8 | - |
| intron-exon | OSTF1 | 9 | - | SYNE2 | 14 | - |
| exon-intron | RBBP4 | 1 | - | LINC01515 | 10 | + |
| exon-exon | ACSL4 | X | + | CANX | 5 | + |
| intron-exon | HERC2P9 | 15 | - | CWC27 | 5 | + |
| exon-exon | ND4 | MT | - | CDH1 | 16 | + |
| intron-exon | LARGE1 | 22 | + | ITPRID2 | 2 | + |
| exon-intron | ND2 | MT | + | MTND2P28 | 1 | - |
| exon-intron | ZNF562 | 19 | + | WASHC3 | 12 | - |
| exon-intron | FADS1 | 11 | + | YWHAE | 17 | + |
| exon-exon | ABL2 | 1 | + | ND5 | MT | - |
| exon-exon | C1orf220 | 1 | + | C1orf220 | 1 | - |
| exon-exon | VEZF1P1 | 3 | + | VEZF1 | 17 | + |
| exon-intron | STAT5A | 17 | - | RNR2 | MT | + |
| intron-exon | CEBPZ | 2 | - | ATP6 | MT | + |
| exon-intron | H19 | 11 | - | MRPL23 | 11 | + |
| exon-intron | ATP6 | MT | - | ZYX | 7 | + |
| exon-exon | RNA45SN1 | 21 | - | RNA45SN2 | 21 | + |
| exon-exon | RNA45SN1 | 21 | - | RNA45SN2 | 21 | + |
| exon-exon | RNA45SN1 | 21 | - | RNA45SN3 | 21 | + |
| exon-exon | ZNF638 | 2 | + | ZNF638 | 2 | - |
| exon-exon | TALAM1 | 11 | - | MALAT1 | 11 | - |
| exon-intron | NEAT1 | 11 | - | SNAP29 | 22 | - |
| exon-exon | OSBPL10 | 3 | - | FOS | 14 | + |
| exon-exon | BET1L | 11 | - | BET1L | 11 | + |
| exon-exon | SNORD3D | 17 | - | ARF1 | 1 | + |
| exon-intron | SEC61A1 | 3 | + | RUVBL1 | 3 | - |
| exon-intron | RASSF7 | 11 | - | GPRC5A | 12 | + |
| exon-exon | TSPAN3 | 15 | + | TSPAN3 | 15 | - |
| intron-exon | MYL6 | 12 | - | DOK3 | 5 | + |
| exon-exon | CAPNS1 | 19 | + | GRIP2 | 3 | - |
| exon-exon | THUMPD1 | 16 | + | THUMPD1 | 16 | - |
| exon-intron | POGZ | 1 | + | ELMO1 | 7 | + |
| exon-exon | FTL | 19 | - | FTL | 19 | + |
| intron-exon | MRPL23 | 11 | + | H19 | 11 | - |
| exon-exon | SUMF2 | 7 | - | SUMF2 | 7 | + |
| intron-exon | LOC105378951 | 1 | + | SPTLC2 | 14 | - |
| exon-exon | PGRMC1 | X | - | PGRMC1 | X | + |
| exon-exon | FPGS | 9 | - | CAPNS1 | 19 | - |
| exon-exon | DCTD | 4 | - | DCTD | 4 | + |
| exon-intron | OSBPL8 | 12 | + | MINPP1 | 10 | + |
| intron-exon | MAP4K1 | 19 | + | DNAJB9 | 7 | - |
| exon-exon | ND2 | MT | - | ND2 | MT | + |
| intron-exon | STARD4-AS1 | 5 | + | ND2 | MT | + |
| exon-exon | NRAS | 1 | + | GLS | 2 | - |
| exon-intron | ND4 | MT | + | KDM4C | 9 | + |
| exon-exon | CD68 | 17 | + | CD68 | 17 | - |
| exon-exon | IGHG1 | 14 | - | IGHG2 | 14 | + |
| exon-exon | COL1A2 | 7 | + | LTB4R | 14 | - |
| exon-exon | TRIM26 | 6 | - | TGM2 | 20 | + |
| exon-intron | RNA45SN3 | 21 | + | THTPA | 14 | - |
| intron-exon | EPS8 | 12 | + | KLHL24 | 3 | - |
| intron-exon | TRIM38 | 6 | - | ACTB | 7 | + |
| intron-exon | DDN-AS1 | 12 | + | ATP6 | MT | - |
| exon-exon | SUOX | 12 | - | TOX4 | 14 | - |
| exon-exon | ITIH5 | 10 | - | PELP1 | 17 | - |
| exon-exon | SOD1 | 21 | + | NAP1L4 | 11 | + |
| exon-exon | RPS8P8 | 5 | + | NISCH | 3 | + |
| exon-intron | ND1 | MT | - | PDZRN4 | 12 | + |
| exon-exon | EIF4G2 | 11 | - | EIF4G2 | 11 | + |
| exon-exon | PTK2 | 8 | + | PTK2 | 8 | - |
| exon-exon | MTA3 | 2 | + | COX1 | MT | - |
| exon-intron | ACTB | 7 | - | LOC101927978 | 16 | + |
| exon-exon | RPS18 | 6 | - | RAPGEF1 | 9 | + |
| exon-intron | STAT1 | 2 | - | RNR2 | MT | + |
| exon-exon | COX2 | MT | + | UBXN1 | 11 | - |
| exon-exon | CSH2 | 17 | - | NFYA | 6 | + |
| exon-exon | PCDH1 | 5 | - | COX1 | MT | + |
| exon-intron | MYH3 | 17 | - | TPT1-AS1 | 13 | - |
| exon-exon | TPM1 | 15 | + | HOPX | 4 | - |
| exon-intron | NR1D2 | 3 | + | THRB-AS2 | | + |
| exon-exon | MAL | 2 | - | RGL1 | 1 | + |
| exon-exon | GALC | 14 | - | ND5 | MT | + |
| intron-exon | RNR1 | MT | - | CSNK1A1 | 5 | - |
| intron-exon | RNR2 | MT | + | SLC25A23 | | - |
| exon-exon | ND4 | MT | + | TMIGD3 | 1 | - |
| exon-exon | F11 | 4 | + | ANKH | 5 | - |
| exon-exon | MAGEA4 | X | + | SMPD1 | 11 | + |
| exon-exon | IGLV3-19 | 22 | + | IGLL5 | 22 | + |
| exon-exon | ND5 | MT | + | MOB1A | 2 | - |
| intron-exon | IGH | 14 | - | IGHV4-34 | 14 | - |
| exon-exon | SYP | X | - | CYFIP2 | 5 | + |
| exon-exon | PIGT | 20 | - | COL2A1 | 12 | + |
| exon-intron | MALAT1 | 11 | + | DNASE1 | 16 | + |
| intron-exon | MEF2C-AS2 | | + | VPS39 | 15 | - |
| intron-exon | GRID2 | 4 | - | SEPTIN3 | 22 | + |
| exon-intron | CMTR2 | 16 | + | SH3PXD2A | 10 | + |
| intron-exon | DPP6 | 7 | - | ND5 | MT | - |
| exon-intron | FOXG1 | 14 | - | RNF169 | 11 | + |
| exon-exon | COX1 | MT | - | IGSF8 | 1 | - |
| exon-intron | COX1 | MT | - | RHOBTB1 | | - |
| intron-exon | ARID1B | 6 | - | SESTD1 | 2 | - |
| intron-exon | NXN | 17 | + | RBL2 | 16 | + |
| exon-intron | ZNF720 | 16 | + | SAP30L | 5 | + |
| exon-intron | PALM2AKAP2 | 9 | + | NR4A1 | 12 | + |
| exon-intron | HLA-E | 6 | + | AFF4 | 5 | + |
| exon-exon | TUBG2 | 17 | + | TUBB4A | 19 | - |
| intron-exon | DACH1 | 13 | - | H3P6 | 2 | + |
| exon-exon | RPL3 | 22 | - | RPL3 | 22 | + |
| intron-exon | WSB1 | 17 | + | PLAC4 | 21 | - |
| intron-exon | LOC112268292 | | - | CSH1 | 17 | - |
| exon-intron | MROH7-TTC4 | | + | FO393415.3 | | - |
| intron-exon | DIS3L | 15 | - | CBX3 | 7 | + |
| exon-exon | EIF5AL1 | 10 | + | HSF1 | 8 | + |
| exon-intron | TTPAL | 20 | - | HNF4A-AS1 | | - |
| exon-exon | RPS10-NUDT3 | 6 | - | SERINC5 | 5 | - |
| intron-exon | LOC107985664 | X | - | GSTP1 | | + |
| exon-intron | ST6GALNAC4 | 9 | - | FBXO32 | 8 | - |
| exon-intron | ZNF444 | | + | SGMS1 | 10 | + |
| exon-exon | CASP4 | | - | MBNL2 | 13 | + |
| exon-intron | USP2 | 11 | - | SLC38A9 | 5 | - |
| exon-exon | SURF6 | 9 | - | TTR | 18 | + |
| intron-exon | PRSS56 | | + | HBA2 | 16 | + |
| exon-exon | RNU6-2 | 19 | + | ITGB1 | 10 | - |
| exon-exon | B4GALT1 | 9 | + | LAMC3 | 9 | + |
| exon-exon | VWF | 12 | - | FN1 | 2 | - |
| exon-intron | RPL15P3 | 6 | - | SCIN | 7 | + |
| exon-exon | RNA45SN3 | 21 | + | GNAS | 20 | + |
| intron-exon | HIC2 | | + | RAF1 | 3 | + |
| intron-exon | LOC107985325 | 19 | + | HIPK3 | 11 | - |
| intron-exon | MIGA1 | 1 | + | ALDOA | 16 | + |
| exon-exon | XBP1 | 22 | - | XBP1 | 22 | + |
| intron-exon | NHSL1 | 6 | + | RNA45SN3 | 21 | + |
| exon-exon | CRACD | 4 | + | H19 | 11 | - |
| exon-exon | TNIP1 | 5 | + | VIM | 10 | + |
| intron-exon | CHMP4A | 14 | - | DPAGT1 | 11 | - |
| exon-exon | HNRNPUL1 | 19 | + | CSH1 | 17 | + |
| exon-exon | DLK1 | 14 | - | RPS11 | 19 | + |
| exon-exon | TMEM53 | 1 | - | LOC107984950 | 1 | - |
| exon-intron | GPR143 | X | - | RASGRF1 | 15 | - |
| exon-exon | DTL | 1 | - | DTL | 1 | + |
| exon-intron | GLUL | 1 | - | IGKC | 2 | - |
| intron-exon | CFH | 1 | + | TP53INP1 | 8 | - |
| exon-exon | RNA45SN2 | 21 | - | FN1 | 2 | - |
| exon-exon | CDC42 | 1 | + | RNF14 | 5 | + |
| exon-exon | CCDC169 | 13 | - | SOHLH2 | 13 | - |
| exon-exon | TMEM185B | 2 | - | SCRIB | 8 | - |
| exon-intron | TCTEX1D2 | 3 | - | ANOS1 | | + |
| exon-exon | PRUNE2 | 9 | - | ACTC1 | 15 | - |
| exon-exon | AFF1 | 4 | - | FBLN1 | 22 | - |
| exon-exon | PSG1 | 19 | - | ISM2 | | + |
| exon-exon | COASY | 17 | + | CSH2 | 17 | - |
| exon-exon | KAT8 | 16 | - | SON | 21 | - |
| exon-exon | ISYNA1 | 19 | - | CSH1 | 17 | - |
| exon-exon | DLG5 | 10 | + | CSH1 | 17 | + |
| exon-exon | WASH8P | 12 | + | NCAPD2 | 12 | - |
| exon-intron | SNAPC3 | | + | POLR3E | | + |
| exon-exon | NEAT1 | 11 | + | COX3 | MT | + |
| exon-exon | RN7SK | 6 | + | HLA-A | 6 | + |
| exon-intron | CLEC7A | | - | MAP7 | 6 | + |
| exon-exon | LOC105378179 | 14 | - | NUDT19 | 19 | + |
| exon-intron | PPP1R12A | 12 | - | CRYZL1 | 21 | + |
| exon-exon | HNRNPK | 9 | - | SUMO2 | 17 | - |
| intron-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-exon | ENTPD6 | 20 | + | LOC105372579 | 20 | + |
| exon-intron | CSH1 | 17 | + | PBX3 | 9 | + |
| exon-exon | MALAT1 | 11 | + | USO1 | 4 | + |
| intron-exon | C3orf52 | 3 | - | PHLDB2 | 3 | - |
| exon-exon | SERPING1 | 11 | - | SERPING1 | 11 | + |
| intron-exon | PKD1P2 | | + | USP22 | 17 | - |
| exon-intron | LRRC47 | 1 | - | AC009093.8 | 16 | + |
| intron-exon | SYN1 | X | - | NT5C1B-RDH14 | 2 | + |
| exon-exon | NFKB1 | 4 | + | ITPKB | 1 | - |
| exon-exon | TNRC18 | 7 | - | MFSD12 | 19 | + |
| intron-exon | ZSCAN5A | 19 | + | LOC112268243 | | + |
| intron-exon | STAU1 | 20 | + | USP33 | 1 | + |
| intron-exon | RAF1 | 3 | - | MSS51 | 10 | - |
| intron-exon | EBPL | 13 | + | KPNA3 | 13 | + |
| intron-exon | PRDM10 | 11 | - | SLC30A6 | 2 | + |
| exon-intron | EXOSC3 | | - | TRMT10B | 9 | - |
| exon-exon | ZFAND2B | 2 | - | ZFAND2B | 2 | + |
| exon-exon | SP1 | 12 | - | GPATCH2L | 14 | - |
| exon-exon | TPT1 | 13 | - | TPT1 | 13 | + |
| exon-exon | EEF1G | 11 | - | EEF1G | 11 | + |
| exon-exon | TMEM14A | 6 | + | TMEM14A | 6 | - |
| intron-exon | TSNARE1 | 8 | - | ACTB | 7 | + |
| exon-exon | SNAP29 | 22 | - | RNF115 | 1 | + |
| intron-exon | FBXL17 | 5 | - | AHNAK | 11 | - |
| exon-exon | CMBL | 5 | - | EMC10 | 19 | + |
| exon-intron | TNPO1 | 5 | - | KIF5A | 12 | + |
| intron-exon | CCDC183 | 9 | - | PABPC1 | 8 | + |
| exon-intron | HMGB1 | 13 | + | TLE4 | 9 | - |
| exon-exon | RPS3A | 4 | + | RPS3AP6 | 15 | - |
| exon-exon | GNL1 | 6 | - | GNL1 | 6 | + |
| exon-exon | RPL10P9 | 5 | + | RPL10P16 | 19 | + |
| exon-exon | ITPR2 | 12 | - | ITPR2 | 12 | + |
| exon-exon | ACTR2 | 2 | + | ACTR2 | 2 | - |
| exon-exon | CDK2AP1 | 12 | - | CDK2AP1 | 12 | + |
| exon-exon | ACTB | 7 | - | ACTB | 7 | + |
| exon-exon | LOC105372061 | 18 | - | DTNA | 18 | - |
| exon-exon | RPS5 | 19 | + | RPS5 | 19 | - |
| exon-exon | SLC9A3R2 | | - | MRAP2 | 6 | - |
| exon-intron | ZNF264 | | - | LOC107985291 | 19 | - |
| exon-intron | ZNF264 | | - | LOC107985291 | 19 | - |
| exon-exon | PPP2CB | 8 | + | KIAA1109 | 4 | - |
| exon-exon | BAZ2A | 12 | + | CSDE1 | 1 | + |
| exon-exon | RRP36 | 6 | + | RRP36 | 6 | - |
| exon-exon | TCP1 | 6 | - | ACAT2 | 6 | + |
| exon-exon | USP31 | 16 | - | USP31 | 16 | + |
| exon-exon | RPS2 | 16 | - | RPS2 | 16 | + |
| exon-exon | RPL23AP61 | 10 | - | MSMB | 10 | - |
| exon-intron | EIF3E | 8 | - | GRB14 | 2 | - |
| exon-exon | RACK1 | 5 | - | RACK1 | 5 | + |
| exon-exon | CD74 | 5 | - | CD74 | 5 | + |
| intron-exon | IGKC | 2 | + | RPL39P3 | 6 | + |
| exon-exon | PKIG | 20 | + | PKIG | 20 | - |
| exon-exon | GLO1 | 6 | - | GLO1 | 6 | + |
| exon-intron | LYSMD4 | 15 | - | LRRC28 | 15 | - |
| intron-exon | TPK1 | 7 | - | EEF1A1 | 6 | + |
| exon-exon | PPARA | 22 | + | PPARA | 22 | - |
| exon-exon | GPN3 | 12 | - | GPN3 | 12 | + |
| exon-exon | LOC105372582 | 20 | - | LOC107985400 | 20 | - |
| exon-exon | SAP18 | 13 | + | SAP18 | 13 | - |
| exon-exon | EEF1A1 | 6 | - | EEF1A1P9 | 4 | - |
| intron-exon | ACOT2 | 14 | - | KRAS | 12 | + |
| exon-exon | FRZB | 2 | - | FRZB | 2 | + |
| exon-exon | LOC389906 | X | + | FAM239A | X | + |
| exon-intron | GTF2H2 | 5 | - | GUSBP16 | 5 | - |
| exon-exon | CCDC88A | 2 | + | CCDC88A | 2 | - |
| exon-intron | ZBTB7A | 19 | + | NUP58 | 13 | - |
| exon-exon | IFI35 | 17 | - | PPIP5K2 | 5 | - |
| exon-intron | ING1 | 13 | - | GTF2H2B | 5 | + |
| exon-exon | GGA2 | 16 | - | RPF1 | 1 | + |
| exon-intron | ZCCHC4 | 4 | - | WAPL | 10 | + |
| intron-exon | LOC105370041 | 12 | - | DDX55 | 12 | - |
| exon-intron | ATM | 11 | + | LOC106050102 | X | + |
| intron-exon | CDC26 | 9 | - | SLC31A1 | 9 | - |
| exon-intron | DKFZP586I1420 | | - | AC006978.2 | | - |
| exon-exon | ZNF107 | 7 | + | ZNF107 | 7 | - |
| exon-intron | NORAD | 20 | - | CTC-329D1.2 | | + |
| intron-exon | NCOA2 | 8 | - | SLC35B4 | 7 | - |
| exon-intron | OGA | 10 | - | OGA | 10 | + |
| exon-exon | OGA | 10 | - | ZC3HAV1 | 7 | - |
| intron-exon | FNDC3A | 13 | + | PTPRF | 1 | - |
| exon-exon | R3HDM4 | 19 | - | GPD1 | 12 | - |
| exon-exon | COX3 | MT | - | UBB | 17 | - |
| exon-exon | RNA45SN3 | 21 | - | RNA45SN2 | 21 | - |
| exon-intron | RNA45SN2 | 21 | - | MRC2 | 17 | + |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN3 | 21 | + |
| exon-exon | RAD23B | 9 | - | RNA45SN1 | 21 | + |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN1 | 21 | - |
| intron-exon | RNA28SP | 21 | - | RNA45SN3 | 21 | + |
| intron-exon | TLE1 | 9 | - | ATP8 | MT | - |
| exon-exon | PICALM | 11 | - | DIAPH1 | 5 | - |
| exon-intron | RNA45SN2 | 21 | + | RNA28SP | 21 | + |
| exon-exon | EHF | 11 | - | PDK4 | 7 | + |
| exon-exon | NCSTN | 1 | - | NCSTN | 1 | + |
| intron-exon | FBRS | 16 | - | FBRS | 16 | + |
| exon-intron | BACE2 | 21 | - | RGL1 | 1 | - |
| intron-exon | ACBD3 | 1 | - | PTBP2 | 1 | - |
| intron-exon | MYO6 | 6 | - | DSP | 6 | + |
| exon-exon | TMEM33 | 4 | - | ZNF451 | 6 | + |
| exon-exon | HNRNPA3P1 | 10 | - | RNA45SN2 | 21 | + |
| exon-intron | TALAM1 | 11 | - | GLIS3 | 9 | - |
| exon-exon | CASP2 | 7 | + | CASP2 | 7 | - |
| exon-exon | DSG3 | 18 | - | TNRC6B | 22 | - |
| exon-intron | KCTD3 | 1 | - | PTBP2 | 1 | - |
| exon-exon | TNC | 9 | + | TNC | 9 | - |
| exon-exon | CALD1 | 7 | + | TM9SF4 | 20 | + |
| exon-exon | EBAG9 | 8 | + | MALAT1 | 11 | - |
| intron-exon | KLRG1 | 12 | - | HSPE1-MOB4 | 2 | - |
| intron-exon | MAP2K4 | 17 | - | UAP1 | 1 | - |
| exon-intron | RPS4X | X | - | ASIP | 20 | + |
| exon-exon | CYP3A5 | 7 | - | ZSCAN25 | 7 | + |
| exon-exon | HACD2 | 3 | - | HSP90B1 | 12 | - |
| exon-intron | BORA | 13 | - | DIS3 | 13 | - |
| intron-exon | VAPB | 20 | + | DMD | X | - |
| exon-exon | SLC38A2 | 12 | + | SLC38A2 | 12 | - |
| exon-exon | RNF19A | 8 | - | STRAP | 12 | + |
| exon-exon | CD9 | 12 | - | CD9 | 12 | + |
| intron-exon | MAGI3 | 1 | - | NORAD | 20 | + |
| intron-exon | SEMA3C | 7 | - | ANAPC7 | 12 | + |
| intron-exon | PMPCB | 7 | + | MAP4 | 3 | + |
| exon-intron | SORBS2 | 4 | + | PLCB1 | 20 | - |
| exon-exon | CALM1 | 14 | + | MGP | 12 | - |
| exon-exon | SSR3 | 3 | + | SATB1 | 3 | + |
| exon-intron | PCID2 | 13 | - | RAB3GAP2 | 1 | - |
| exon-exon | PPP1R15A | 19 | - | EGLN1 | 1 | - |
| exon-exon | RNA45SN1 | 21 | - | RNA45SN3 | 21 | + |
| intron-exon | COX15 | 10 | - | ERBB3 | 12 | + |
| intron-exon | GLMN | 1 | - | HOOK3 | 8 | - |
| exon-intron | NELFCD | 20 | - | NELFCD | 20 | + |
| intron-exon | MAST4 | 5 | + | COL12A1 | 6 | - |
| intron-exon | AZGP1 | 7 | + | AZGP1P1 | 7 | + |
| exon-intron | RHOBTB2 | 8 | - | LOC107984124 | 8 | - |
| exon-exon | KCTD2 | 17 | + | KCTD2 | 17 | - |
| exon-exon | TALAM1 | 11 | - | LAMP2 | X | - |
| exon-exon | LOC105378179 | 14 | - | RN7SL3 | 14 | - |
| exon-exon | TFPI2 | 7 | - | UBE2I | 16 | + |
| exon-intron | CSDE1 | 1 | + | CLASP1 | 2 | + |
| exon-intron | CAST | 5 | - | LOC339874 | 3 | - |
| exon-intron | COX1 | MT | + | AL513303.1 | 10 | - |
| exon-exon | COX3 | MT | - | KDM5B | 1 | + |
| exon-exon | EIF3C | 16 | - | EIF3CL | 16 | - |
| exon-exon | LOC105378179 | 14 | - | EGLN1 | 1 | - |
| exon-intron | TPM4 | 19 | - | PTPRF | 1 | - |
| intron-exon | SORT1 | 1 | + | NEAT1 | 11 | + |
| intron-exon | LOC100506282 | 11 | - | PCF11 | 11 | - |
| exon-exon | LEO1 | 15 | + | LEO1 | 15 | - |
| intron-exon | AC103409.1 | 8 | - | TASOR2 | 10 | - |
| exon-intron | PSME2 | 14 | + | RAB10 | 2 | - |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN1 | 21 | + |
| exon-exon | EIF4G1 | 3 | - | EIF4G1 | 3 | + |
| exon-intron | DHCR24 | 1 | + | LOC105374140 | 3 | + |
| exon-exon | EIF4G1 | 3 | - | EIF4G1 | 3 | + |
| intron-exon | TNKS1BP1 | 11 | + | CDC42SE1 | 1 | - |
| intron-exon | CHKA | 11 | - | NDUFAF4 | 6 | + |
| exon-exon | ZNF185 | X | + | B2M | 15 | - |
| exon-intron | CCND1 | 11 | - | ACTR3C | 7 | - |
| exon-exon | VAV2 | 9 | + | VAV2 | 9 | - |
| exon-exon | TAGLN | 11 | + | ANKHD1-EIF4EBP3 | 5 | + |
| exon-exon | ATF3 | 1 | + | SNX1 | 15 | + |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN1 | 21 | + |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN3 | 21 | + |
| exon-intron | ND4 | MT | - | RNA18SP5 | 21 | + |
| exon-intron | RNA45SN1 | 21 | - | RNR1 | MT | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN1 | 21 | - |
| intron-exon | KIF3A | 5 | + | RAB2A | 8 | - |
| exon-intron | MAPRE2 | 18 | - | SMOC1 | 14 | + |
| exon-exon | EEF1E1-BLOC1S5 | 6 | - | DSC2 | 18 | - |
| exon-intron | ARF6 | 14 | + | POLD3 | 11 | - |
| exon-exon | SLC39A8 | 4 | - | GLS | 2 | - |
| exon-intron | ERRFI1 | 1 | + | PALLD | 4 | - |
| exon-intron | FAM3C2 | X | + | MCC | 5 | - |
| exon-exon | EIF4G2 | 11 | - | EIF4G2 | 11 | + |
| intron-exon | AP3B1 | 5 | + | SCAMP1 | 5 | + |
| exon-exon | RPL13AP22 | 12 | + | GOT2 | 16 | + |
| exon-intron | PAFAH1B2 | 11 | - | AGO3 | 1 | + |
| exon-intron | BARD1 | 2 | - | SNX9 | 6 | + |
| exon-exon | SERINC3 | 20 | + | TNRC6A | 16 | - |
| exon-exon | TNPO1 | 5 | - | PSMD6 | 3 | - |
| exon-exon | KLK10 | 19 | - | ZSCAN29 | 15 | + |
| exon-intron | RNA45SN1 | 21 | + | RRP12 | 10 | - |
| exon-intron | NEAT1 | 11 | - | GBE1 | 3 | + |
| intron-exon | WDSUB1 | 2 | + | ILF2 | 1 | - |
| exon-exon | BIRC3 | 11 | + | MALT1 | 18 | + |
| exon-exon | SULF1 | 8 | - | TMED10 | 14 | - |
| exon-exon | METTL14 | 4 | + | HSP90B1 | 12 | + |
| intron-exon | JAK1 | 1 | + | LLPH | 12 | + |
| exon-exon | PAXIP1 | 7 | - | RPL4 | 15 | - |
| intron-exon | CHCHD3 | 7 | + | TTC8 | 14 | - |
| exon-intron | UPK1B | 3 | - | RASAL2 | 1 | - |
| exon-exon | CALU | 7 | + | CLCA4 | 1 | - |
| exon-exon | FANCI | 15 | + | OLA1 | 2 | - |
| exon-intron | S100A2 | 1 | - | LOC105376294 | 9 | - |
| intron-exon | RNR2 | MT | + | HSP90AA1 | 14 | - |
| exon-exon | PCNA | 20 | + | S100A8 | 1 | + |
| exon-intron | CYB5R1 | 1 | - | RNR1 | MT | - |
| exon-exon | B2M | 15 | - | RPL21P16 | 10 | + |
| exon-exon | S100A8 | 1 | - | B2M | 15 | - |
| exon-exon | ELF2 | 4 | - | ZNF431 | 19 | + |
| exon-exon | COX2 | MT | - | CENPF | 1 | + |
| exon-exon | RAP2B | 3 | + | ATP6 | MT | + |
| exon-exon | S100A8 | 1 | - | POSTN | 13 | - |
| exon-exon | CAPN12 | 19 | - | ACTN4 | 19 | + |
| exon-exon | FCGR3A | 1 | + | MMP10 | 11 | - |
| intron-exon | CSF1R | 5 | - | HMGB2 | 4 | + |
| exon-intron | ATF6 | 1 | - | ZXDC | 3 | + |
| exon-exon | SS18L1 | 20 | - | EEA1 | 12 | + |
| exon-intron | LOC105370397 | 14 | + | LINC01572 | 16 | + |
| exon-exon | UBR5 | 8 | - | SDC4 | 20 | - |
| exon-exon | EOLA1 | X | + | SPP1 | 4 | + |
| exon-exon | SULF1 | 8 | - | TMED10 | 14 | - |
| exon-exon | S100A8 | 1 | - | AQR | 15 | - |
| exon-exon | NUSAP1 | 15 | - | SLC25A17 | 22 | - |
| exon-exon | BRF2 | 8 | - | FAM177B | 1 | + |
| exon-exon | EEF1D | 8 | + | EEF1D | 8 | - |
| exon-intron | E2F3 | 6 | - | MMADHC-DT | 2 | - |
| exon-exon | TENT2 | 5 | + | CDKN3 | 14 | - |
| intron-exon | LOC107984282 | 10 | + | BUB3 | 10 | + |
| intron-exon | MXD1 | 2 | - | ANXA1 | 9 | - |
| intron-exon | TSHZ2 | 20 | - | AP3S1 | 5 | + |
| intron-exon | PCCA | 13 | - | LOC105372636 | 20 | + |
| exon-exon | ATP6V0E1 | 5 | + | NTS | 12 | + |
| exon-exon | EXOSC6 | 16 | + | EXOSC6 | 16 | - |
| exon-intron | POSTN | 13 | - | LOC107984219 | 10 | + |
| intron-exon | C1QTNF3 | 5 | - | ESCO1 | 18 | - |
| exon-exon | ANAPC4 | 4 | + | USP47 | 11 | - |
| exon-exon | FANCL | 2 | + | CHD6 | 20 | + |
| intron-exon | ROBO1 | 3 | + | SPARC | 5 | - |
| exon-exon | NRP2 | 2 | - | ERGIC2 | 12 | - |
| exon-exon | BRF2 | 8 | - | SOD2 | 6 | - |
| intron-exon | CMTM4 | 16 | + | TMED2 | 12 | - |
| exon-exon | IL17RD | 3 | - | CTNNA1 | 5 | + |
| exon-exon | ANAPC13 | 3 | - | SYNJ2BP-COX16 | 14 | - |
| intron-exon | CAMK2G | 10 | + | TMEM60 | 7 | - |
| exon-intron | DCAKD | 17 | + | KALRN | 3 | - |
| exon-exon | AHCY | 20 | - | ARFGEF1 | 8 | + |
| exon-exon | GNAI1 | 7 | - | AP1S1 | 7 | + |
| exon-intron | FLNA | X | + | APOO | X | - |
| exon-exon | REG4 | 1 | + | REG4 | 1 | - |
| exon-exon | PPIB | 15 | - | SNX22 | 15 | + |
| exon-intron | LENG8 | 19 | + | SLC9A8 | 20 | + |
| exon-intron | VAMP8 | 2 | - | APOO | X | - |
| exon-exon | SPON1 | 11 | + | RPL3 | 22 | - |
| exon-exon | PTBP1 | 19 | + | UXS1 | 2 | + |
| exon-exon | SPON1 | 11 | + | RPL3P4 | 14 | - |
| exon-exon | S100A13 | 1 | - | DTNBP1 | 6 | + |
| exon-exon | BAG6 | 6 | + | EEF1A1P5 | 9 | + |
| exon-exon | CDH6 | 5 | - | MRC2 | 17 | - |
| exon-exon | CNOT1 | 16 | + | CNOT1 | 16 | - |
| exon-exon | CHM | X | + | ND1 | MT | + |
| exon-exon | FAM102B | 1 | + | SYNPO2 | 4 | - |
| exon-exon | RUSC2 | 9 | - | UBXN1 | 11 | + |
| exon-exon | ATG13 | 11 | - | GGA2 | 16 | + |
| exon-exon | RHOV | 15 | + | TRO | X | + |
| exon-intron | MUC2 | 11 | - | DFFB | 1 | + |
| intron-exon | RPL30 | 8 | - | EEF1A1P5 | 9 | - |
| intron-exon | CNDP2 | 18 | - | SLC17A9 | 20 | + |
| exon-exon | FAM114A1 | 4 | - | ATP11B | 3 | - |
| exon-exon | SAE1 | 19 | + | MAP3K2 | 2 | + |
| exon-intron | TLCD1 | 17 | - | FA2H | 16 | + |
| exon-exon | TTLL4 | 2 | - | TTC7A | 2 | - |
| exon-exon | TBC1D5 | 3 | + | TBC1D5 | 3 | - |
| exon-exon | MAN1A1 | 6 | + | RACK1 | 5 | - |
| exon-exon | GSDMB | 17 | - | LOC102723564 | 15 | + |
| exon-exon | RACK1 | 5 | + | MAN1A1 | 6 | - |
| exon-exon | TMEM214 | 2 | - | TMEM214 | 2 | + |
| exon-exon | SCN9A | 2 | - | SEPTIN2 | 2 | + |
| exon-exon | HDAC7 | 12 | - | NID1 | 1 | - |
| exon-exon | D2HGDH | 2 | - | RNF43 | 17 | - |
| intron-exon | LUC7L3 | 17 | + | DOCK9 | 13 | + |
| exon-exon | RPS7P1 | 17 | - | COX3 | MT | - |
| exon-exon | ND4L | MT | - | CD164 | 6 | + |
| exon-exon | NEAT1 | 11 | - | NEAT1 | 11 | + |
| exon-intron | HDAC1 | 1 | + | RNR2 | MT | + |
| exon-exon | ST14 | 11 | + | COX2 | MT | - |
| exon-intron | SS18L1 | 20 | + | FBXL17 | 5 | - |
| exon-exon | ZFP36L1 | 14 | + | COX3 | MT | - |
| exon-exon | TIMM23 | 10 | + | ALDH2 | 12 | - |
| exon-exon | ATP6 | MT | + | LIPG | 18 | - |
| exon-exon | GART | 21 | - | CEACAM5 | 19 | - |
| exon-exon | OTULINL | 5 | + | C9orf78 | 9 | - |
| intron-exon | LOC107985141 | 18 | + | PSMC6 | 14 | - |
| exon-exon | MFN2 | 1 | - | RPL13A | 19 | + |
| intron-exon | LOC105378011 | 6 | - | SLC11A2 | 12 | - |
| intron-exon | ANXA4 | 2 | - | CPEB2 | 4 | + |
| exon-exon | CETN3 | 5 | - | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | + |
| exon-intron | FBXO9 | 6 | + | LOC101928626 | 1 | + |
| exon-exon | COX2 | MT | - | EHF | 11 | + |
| exon-exon | RNA45SN1 | 21 | - | ATP8 | MT | - |
| intron-exon | LOC105377582 | 4 | + | COPG1 | 3 | - |
| intron-exon | TGS1 | 8 | + | TGS1 | 8 | - |
| intron-exon | NF1 | 17 | + | EEF1D | 8 | - |
| exon-exon | CTSB | 8 | + | ARRDC2 | 19 | + |
| exon-exon | SLC12A2 | 5 | + | APOBEC3G | 22 | - |
| intron-exon | RNR2 | MT | - | FUCA1 | 1 | - |
| exon-exon | RPS17 | 15 | + | SPTBN1 | 2 | - |
| exon-exon | COX1 | MT | - | FBL | 19 | + |
| exon-intron | RDH10 | 8 | + | RPL30 | 8 | - |
| exon-exon | GUSBP16 | 5 | - | FAM98B | 15 | + |
| exon-exon | TMED2 | 12 | + | PPP2R5E | 14 | + |
| exon-exon | NDUFV2 | 18 | + | SRRM2 | 16 | + |
| exon-exon | VDAC1 | 5 | + | ARL5A | 2 | - |
| exon-exon | BAZ1A | 14 | - | CACNA1H | 16 | - |
| exon-exon | IGLC2 | 22 | + | SPTLC1 | 9 | - |
| exon-exon | H3-3A | 1 | - | H3P6 | 2 | + |
| exon-exon | PLOD2 | 3 | - | RPL13AP5 | 10 | + |
| exon-exon | GRN | 17 | - | GRN | 17 | + |
| exon-intron | RPS8 | 1 | - | IGH | 14 | - |
| exon-intron | FN1 | 2 | + | VCAN-AS1 | 5 | - |
| exon-exon | MUC16 | 19 | - | MUC16 | 19 | + |
| intron-exon | MYO10 | 5 | + | COL3A1 | 2 | - |
| exon-exon | NRBP2 | 8 | + | TM2D2 | 8 | - |
| exon-exon | LRP6 | 12 | - | ODC1 | 2 | - |
| exon-exon | MAVS | 20 | - | NAT9 | 17 | + |
| exon-intron | TSG101 | 11 | + | NBPF3 | 1 | - |
| exon-exon | PLXNB1 | 3 | - | GSDMB | 17 | - |
| exon-exon | DGAT1 | 8 | + | DENND1A | 9 | + |
| intron-exon | PDE8A | 15 | + | TACC1 | 8 | + |
| exon-exon | HAUS8 | 19 | - | LGALS1 | 22 | + |
| exon-exon | ABCF3 | 3 | - | UGT8 | 4 | + |
| exon-exon | POLR2A | 17 | + | ECHDC2 | 1 | - |
| exon-intron | WDFY3 | 4 | + | UBXN11 | 1 | + |
| exon-exon | TMEM231 | 16 | - | TMEM214 | 2 | + |
| exon-exon | CEP295 | 11 | + | MCM4 | 8 | - |
| exon-exon | NUP98 | 11 | + | SPIN4 | X | + |
| exon-exon | NUP214 | 9 | + | PKM | 15 | - |
| exon-intron | EEF1G | 11 | - | HNRNPA2B1 | 7 | + |
| exon-exon | MRPS2 | 9 | + | CCDC92B | 17 | + |
| exon-exon | MAN2A2 | 15 | + | LSP1 | 11 | + |
| exon-exon | DDX49 | 19 | + | NLE1 | 17 | - |
| exon-exon | AKAP8L | 19 | + | ZFP36L2 | 2 | + |
| exon-exon | CEACAM5 | 19 | + | RUBCNL | 13 | - |
| exon-exon | SCAMP5 | 15 | - | INF2 | 14 | + |
| exon-exon | HSPB6 | 19 | - | REG4 | 1 | - |
| exon-exon | CTSC | 11 | + | CTSC | 11 | - |
| exon-intron | PIGY | 4 | - | PTPRG | 3 | - |
| intron-exon | RAMP1 | 2 | + | AGR2 | 7 | - |
| exon-exon | ECT2 | 3 | + | ECT2 | 3 | - |
| exon-exon | PKM | 15 | - | MYH14 | 19 | + |
| exon-exon | RPS2 | 16 | + | HSP90AA1 | 14 | - |
| exon-exon | GNG12 | 1 | + | ETS2 | 21 | - |
| exon-exon | EIF3A | 10 | + | MAOA | X | + |
| exon-intron | SCAMP3 | 1 | - | RNR2 | MT | - |
| exon-exon | TMED2 | 12 | + | LGR5 | 12 | - |
| exon-exon | GSTZ1 | 14 | + | LRPAP1 | 4 | - |
| exon-exon | CCL20 | 2 | - | SYNC | 1 | - |
| exon-exon | CYCS | 7 | - | FSIP1 | 15 | - |
| exon-intron | NPM1 | 5 | + | RNR2 | MT | - |
| intron-exon | ZSWIM5 | 1 | + | MYH9 | 22 | + |
| exon-exon | SLC7A5 | 16 | - | FBXO9 | 6 | + |
| exon-exon | EEF1A1 | 6 | - | RPL9P8 | 15 | - |
| exon-intron | RPS25 | 11 | - | RPL7P9 | 1 | - |
| exon-exon | HSP90AA1 | 14 | - | FAM53B | 10 | - |
| exon-intron | RPLP1 | 15 | - | EFCAB13 | 17 | - |
| exon-exon | RPL37 | 5 | - | ANKRD54 | 22 | - |
| exon-exon | COX3 | MT | - | MEST | 7 | - |
| exon-exon | GAPDH | 12 | + | ECHS1 | 10 | - |
| exon-exon | MYH14 | 19 | - | YARS1 | 1 | + |
| exon-intron | RPL10A | 6 | - | LINC01492 | 9 | - |
| intron-exon | LLGL2 | 17 | - | STRIP1 | 1 | + |
| exon-exon | LGALS4 | 19 | - | COL3A1 | 2 | + |
| exon-exon | NFIA | 1 | + | FAM210B | 20 | + |
| exon-exon | PIGR | 1 | + | PARL | 3 | - |
| exon-exon | MCL1 | 1 | + | CDCA7 | 2 | - |
| exon-exon | ZC3H11A | 1 | + | ARAP3 | 5 | + |
| exon-exon | CLTC | 17 | - | USP7 | 16 | - |
| intron-exon | PLPPR2 | 19 | + | INS-IGF2 | 11 | + |
| exon-exon | SLC2A3 | 12 | - | PUM1 | 1 | + |
| exon-exon | CD99 | Y | - | TMEM44 | 3 | - |
| exon-exon | MAPRE2 | 18 | - | EXT2 | 11 | + |
| exon-exon | GTF2F2 | 13 | - | TRIL | 7 | - |
| exon-intron | SPINT1-AS1 | 15 | + | SORBS2 | 4 | + |
| exon-intron | PSMD6 | 3 | - | VPS13C | 15 | - |
| exon-exon | FAM91A1 | 8 | + | STRAP | 12 | + |
| exon-exon | COPB1 | 11 | + | SLC9A3-AS1 | 5 | + |
| intron-exon | ERRFI1 | 1 | - | UCHL1 | 4 | + |
| exon-exon | SRP14 | 15 | + | CNPY2 | 12 | - |
| intron-exon | LOC107984418 | 11 | - | MAT2A | 2 | - |
| exon-exon | GRM3 | 7 | + | CASR | 3 | + |
| exon-exon | FFAR4 | 10 | + | LOC105378437 | 10 | - |
| intron-exon | C8orf34 | 8 | - | GSTO2 | 10 | - |
| intron-exon | ZNF727 | | + | ZNF736 | 7 | + |
| intron-exon | UBE2Q2P2 | 15 | + | LOC102724117 | | - |
| exon-exon | LINC02830 | | + | LOC101928283 | 7 | + |
| exon-exon | MFAP3 | 5 | + | PCNX2 | 1 | - |
| exon-intron | KIF19 | 17 | - | IGL | 22 | + |
| intron-exon | LOC101927066 | 8 | - | AXIN2 | 17 | - |
| exon-intron | SFXN3 | 10 | + | CHCHD2 | 7 | - |
| exon-exon | ANTXR2 | 4 | - | IGFBP3 | 7 | - |
| exon-intron | LINC01622 | 6 | + | AL033381.1 | 6 | + |
| intron-exon | AC011388.1 | | + | CYP4F12 | 19 | + |
| exon-exon | FHDC1 | | + | C2orf72 | 2 | + |
| exon-exon | MT1G | 16 | + | DAO | 12 | + |
| exon-exon | ZDHHC20 | 13 | - | MTHFD2L | 4 | + |
| exon-intron | ITGAL | 16 | - | PSMD8 | 19 | + |
| exon-exon | AZGP1 | 7 | - | CAPRIN2 | 12 | - |
| exon-exon | DHX58 | 17 | + | DIP2C | 10 | - |
| exon-exon | TMPRSS9 | 19 | + | TIMM13 | 19 | + |
| exon-intron | IGHV1-2 | 14 | - | IGH | 14 | - |
| exon-intron | IGHV3-33 | 14 | - | IGH | 14 | - |
| exon-exon | RNA45SN1 | 21 | + | CXXC5 | | + |
| exon-exon | LOC102724760 | | + | ITGB1BP1 | 2 | - |
| exon-exon | MYO6 | 6 | - | PATZ1 | 22 | - |
| exon-intron | ARPC5 | 1 | + | CCNL1 | 3 | - |
| exon-exon | CRTC1 | 19 | + | MAML2 | 11 | - |
| exon-exon | KMT2A | 11 | + | MLLT1 | 19 | - |
| exon-exon | BCR | 22 | + | ABL1 | 9 | + |
| exon-exon | ZNF347 | 19 | + | B3GALT6 | | + |
| intron-exon | PCNP | 3 | + | RPS6 | 9 | - |
| exon-exon | IGHV3-65 | | - | IGHV3-53 | 14 | - |
| exon-exon | ACTR3C | 7 | - | SFTPB | 2 | - |
| exon-intron | TRBV5-6 | 7 | + | TRBJ2-7 | 7 | + |
| exon-exon | TRAV12-2 | 14 | + | TRAJ43 | 14 | + |
| exon-exon | TRAV12-2 | 14 | + | TRAJ41 | 14 | + |
| exon-intron | TRAV12-2 | 14 | + | TRA | 14 | + |
| exon-intron | TRAV12-2 | 14 | + | TRA | 14 | + |
| exon-intron | TRAV12-3 | 14 | + | TRA | 14 | + |
| intron-exon | IGH | 14 | - | IGHV1-18 | 14 | - |
| exon-intron | MYC | 8 | - | IGH | 14 | - |
| exon-exon | SS18 | 18 | - | SSX2 | X | - |
| exon-intron | SSX2 | X | - | SS18 | 18 | - |
| exon-exon | HMGA2 | 12 | + | RAD51B | 14 | + |
| exon-intron | RPS20 | 8 | + | PTPRG | 3 | - |
| exon-intron | THADA | 2 | - | PPARG | 3 | - |
| exon-exon | THADA | 2 | - | LOC389473 | 7 | - |
| exon-exon | BRD4 | 19 | - | NUTM1 | 15 | + |
| exon-exon | RPLP1P4 | 2 | + | RANBP2 | 2 | + |
| exon-exon | ADGRG6 | 6 | + | ADGRG6 | 6 | - |
| exon-exon | MAML2 | 11 | - | CRTC1 | 19 | + |
| exon-exon | KMT2A | 11 | + | MLLT1 | 19 | - |
| exon-exon | KMT2A | 11 | + | EPS15 | 1 | - |
| exon-intron | KMT2A | 11 | + | MLLT10 | 10 | + |
| exon-intron | EPN1 | 19 | + | ZSCAN5A | 19 | + |
| exon-intron | RPS15A | 16 | - | EVL | 14 | - |
| exon-exon | CREB3L2 | 7 | - | PPARG | 3 | + |
| exon-exon | STK4 | 20 | + | LOC105378234 | 5 | - |
| exon-exon | TRAJ43 | | + | TRAC | 14 | + |
| exon-exon | TRAJ48 | 14 | + | TRAC | 14 | + |
| exon-exon | HAUS1 | 18 | + | NEDD4L | 18 | + |
| exon-intron | ACTRT2 | 1 | + | GATA2-AS1 | 3 | - |
| exon-intron | ACTRT2 | 1 | - | GATA2-AS1 | 3 | + |
| intron-exon | EXOC3L1 | | - | KIAA0895L | | - |
| exon-exon | COX2 | MT | - | FTH1 | 11 | - |
| exon-intron | KMT2A | 11 | - | AFF1 | 4 | - |
| intron-exon | BCR | 22 | + | PDGFRA | 4 | + |
| exon-exon | LTV1 | 6 | - | LTV1 | 6 | + |
| exon-exon | NEGR1 | 1 | - | RBM3 | X | + |
| intron-exon | MLLT1 | 19 | - | ERLIN2 | | + |
| intron-exon | NUP58 | | + | CES4A | 16 | + |
| exon-exon | PLA2G2D | 1 | - | PCDH17 | 13 | + |
| exon-exon | FAM239B | X | + | HHIP | 4 | + |
| exon-exon | TMEM198B | 12 | - | TMEM198B | 12 | + |
| exon-intron | SLITRK2 | X | + | HDAC10 | 22 | - |
| exon-exon | CD163L1 | 12 | - | ND4 | MT | + |
| intron-exon | CD276 | 15 | - | TSPAN15 | 10 | + |
| exon-exon | TRAJ54 | | + | TRAC | 14 | + |
| exon-exon | TRAJ33 | 14 | + | TRAC | 14 | + |
| exon-exon | CDH11 | 16 | - | USP6 | 17 | + |
| exon-exon | CDH11 | 16 | - | USP6 | 17 | + |
| exon-exon | CDH11 | 16 | - | USP6 | 17 | + |
| exon-exon | CDH11 | 16 | - | USP6 | 17 | + |
| exon-intron | MLLT3 | 9 | - | KMT2A | 11 | + |
| exon-intron | HMGA2-AS1 | 12 | - | RAD51B | 14 | - |
| intron-exon | IGHV1OR15-9 | 15 | - | IGHJ6 | 14 | - |
| exon-exon | IGHJ3 | 14 | - | IGHG3 | 14 | - |
| exon-exon | IGHV2-5 | 14 | - | IGHG1 | 14 | - |
| exon-exon | IGHV3-53 | 14 | - | IGHV3-20 | 14 | - |
| intron-exon | IGH | 14 | - | IGHJ6 | 14 | - |
| exon-exon | IGHJ6 | 14 | - | IGHG1 | 14 | - |
| exon-intron | IGKV3-11 | | - | IGK | 2 | - |
| exon-exon | DNAL4 | 22 | - | MED10 | 5 | - |
| exon-exon | TRAJ41 | | + | TRAC | 14 | + |
| exon-exon | TRAJ4 | | + | TRAC | 14 | + |
| intron-exon | LOC105377609 | | + | LINC01060 | | + |
| exon-exon | ZNF836 | | - | DMXL2 | 15 | + |
| exon-intron | DBP | 19 | - | SLC16A10 | 6 | - |
| exon-intron | HOXC11 | 12 | + | LOC101928338 | 11 | - |
| exon-intron | LOC107986087 | 3 | + | KCNMB3 | 3 | - |
| exon-exon | CHST11 | 12 | + | LOC105378184 | 14 | + |
| intron-exon | IGHG3 | 14 | + | CHST11 | 12 | + |
| exon-exon | IGHG1 | 14 | + | CHST11 | 12 | + |
| exon-intron | TRBV3-1 | | + | TRBJ1-3 | | + |
| exon-exon | EEF1A1P5 | 9 | + | PMS1 | 2 | + |
| exon-intron | ATP8 | MT | + | APBB1IP | 10 | + |
| exon-intron | IGKV1-39 | 2 | - | IGK | 2 | - |
| exon-exon | IGHV4-30-2 | 14 | - | IGHV4-4 | 14 | - |
| exon-exon | TRBV20-1 | 7 | + | TRBV18 | 7 | + |
| exon-exon | CNBP | 3 | - | USP6 | 17 | + |
| exon-exon | COL1A1 | 17 | - | USP6 | 17 | + |
| exon-exon | THRAP3 | 1 | + | USP6 | 17 | + |
| exon-exon | OMD | 9 | - | USP6 | 17 | + |
| exon-exon | PAX3 | 2 | - | NCOA1 | 2 | + |
| exon-exon | NUP98 | 11 | - | PRRX2 | 9 | + |
| intron-exon | CYP2D7 | 22 | - | CYP2D6 | 22 | - |
| intron-exon | IGH | 14 | - | IGHM | 14 | - |
| exon-intron | IGHV4-59 | 14 | - | IGH | 14 | - |
| exon-exon | IGHJ6 | 14 | - | IGHM | 14 | - |
| exon-exon | IGHJ2 | 14 | - | IGHM | 14 | - |
| exon-exon | IGHV4-61 | 14 | - | IGHM | 14 | - |
| exon-intron | IGHJ6 | 14 | - | IGH | 14 | - |
| exon-intron | IGHV4-30-2 | 14 | - | IGH | 14 | - |
| exon-intron | IGHV4-59 | 14 | - | IGH | 14 | - |
| exon-exon | IGHJ2 | 14 | - | IGHM | 14 | - |
| exon-intron | IGHV4-34 | 14 | - | IGH | 14 | - |
| exon-exon | IGHJ5 | 14 | - | IGHM | 14 | - |
| exon-exon | IGHV4-39 | 14 | - | IGHV4-4 | 14 | - |
| exon-exon | IGHJ3 | 14 | - | IGHM | 14 | - |
| exon-exon | MEF2D | 1 | - | DAZAP1 | 19 | + |
| exon-exon | DAZAP1 | 19 | + | MEF2D | 1 | - |
| exon-exon | IGLV1-44 | 22 | + | IGLV2-11 | 22 | + |
| intron-exon | AKNA | 9 | - | ENO1 | 1 | - |
| exon-intron | CELSR3 | 3 | - | SLC26A6 | 3 | - |
| intron-exon | IGH | 14 | - | IGHM | 14 | - |
| exon-intron | IGKV3-20 | 2 | - | IGK | 2 | - |
| exon-intron | IGKV4-1 | 2 | + | IGK | 2 | + |
| exon-exon | BCL11B | 14 | - | TRDC | 14 | + |
| exon-exon | BCL11B | 14 | - | TRDC | 14 | + |
| exon-intron | BCL11B | 14 | - | TRD | 14 | + |
| exon-intron | BCL11B | 14 | - | TRD | 14 | + |
| exon-intron | NIN | 14 | - | PDGFRB | 5 | - |
| exon-exon | NIN | 14 | - | PDGFRB | 5 | - |
| exon-exon | AKAP9 | 7 | + | BRAF | 7 | - |
| exon-intron | KMT2A | 11 | + | AFF1 | 4 | + |
| exon-exon | IGHJ1 | | - | IGHG1 | 14 | - |
| exon-intron | IGHA1 | 14 | - | FOXP1 | 3 | + |
| exon-exon | SEC14L2 | 22 | + | MTFP1 | 22 | + |
| exon-exon | SEC14L2 | 22 | + | MTFP1 | 22 | + |
| exon-intron | RELN | | - | LOC101927870 | | + |
| intron-exon | A1BG-AS1 | 19 | + | ZNF497 | 19 | + |
| exon-intron | ANTXR1 | 2 | + | AC011897.2 | 2 | + |
| exon-intron | IGKV1D-33 | 2 | + | IGK | 2 | + |
| exon-exon | IGKV1D-33 | 2 | + | IGKV1D-43 | | + |
| exon-exon | IGKV1D-33 | 2 | + | IGKV1D-17 | 2 | + |
| exon-exon | IGLV1-40 | 22 | + | IGLV1-36 | 22 | + |
| exon-exon | SNHG7 | 9 | - | MAGEC1 | | + |
| exon-exon | IGLV6-57 | 22 | + | IGLV2-34 | | + |
| exon-exon | CLTA | 9 | - | RPS17P16 | 22 | + |
| exon-exon | DNM1L | 12 | + | RPL37AP5 | 7 | - |
| exon-exon | TLE1 | 9 | - | COX2 | MT | + |
| exon-exon | CSNK1A1 | 5 | + | OS9 | 12 | + |
| exon-exon | SFPQ | 1 | - | ND2 | MT | + |
| exon-exon | ZC3H7B | 22 | + | NAXD | 13 | + |
| exon-exon | RAB1A | 2 | + | LUC7L3 | 17 | + |
| exon-exon | SNHG14 | 15 | - | SNHG14 | 15 | + |
| exon-exon | NRCAM | 7 | + | RACK1 | 5 | - |
| exon-intron | RGS4 | 1 | + | TSPAN9 | 12 | - |
| exon-intron | CDK4 | 12 | + | RPL4P4 | 3 | - |
| exon-exon | LHX3 | 9 | - | DDB2 | 11 | + |
| exon-exon | PGAP4 | 9 | + | TUBA1B | 12 | - |
| exon-exon | ESYT2 | 7 | + | PPIAP22 | 21 | + |
| exon-exon | LASP1 | 17 | + | EEF1A1 | 6 | - |
| exon-intron | BLCAP | 20 | - | FTH1P10 | 5 | - |
| exon-exon | TMEM248 | 7 | + | TMEM59 | 1 | - |
| exon-exon | PSAT1 | 9 | + | SLC1A4 | 2 | + |
| exon-exon | HUWE1 | X | - | ATP5F1A | 18 | - |
| exon-intron | PSMD3 | 17 | + | PRELID1P6 | 2 | - |
| exon-exon | TULP1 | 6 | - | ND1 | MT | + |
| exon-exon | PRR12 | 19 | + | NUMBL | 19 | - |
| exon-exon | NBEAL1 | 2 | - | MEN1 | 11 | - |
| exon-intron | CLK2 | 1 | - | CHTOP | 1 | + |
| intron-exon | DOCK1 | 10 | - | ENSA | 1 | - |
| exon-exon | RLIM | X | - | ATP6 | MT | + |
| exon-exon | RPL35P2 | 6 | + | RTCB | 22 | - |
| exon-intron | TRIM74 | 7 | - | POM121 | 7 | - |
| exon-exon | FGR | 1 | - | EFCAB2 | 1 | + |
| exon-exon | PLBD2 | 12 | + | ATP8 | MT | + |
| exon-exon | SLC43A3 | 11 | - | FLNA | X | - |
| exon-exon | SLC39A9 | 14 | + | MFF | 2 | + |
| exon-exon | DAPK1 | 9 | + | MAMDC2 | 9 | + |
| exon-exon | GLYR1 | 16 | - | SEPTIN6 | X | - |
| exon-intron | MARS1 | 12 | + | AVIL | 12 | - |
| exon-exon | RHBDD2 | 7 | - | PDE6D | 2 | - |
| exon-exon | RNA45SN2 | 21 | + | SDHA | 5 | + |
| exon-exon | ZNF664 | 12 | + | ND4 | MT | + |
| exon-exon | QSOX1 | 1 | - | MED12 | X | + |
| exon-intron | MYC | 8 | - | IGHM | 14 | - |
| exon-exon | CCDC117 | 22 | + | BLMH | 17 | - |
| exon-exon | EHD1 | 11 | + | RUVBL1 | 3 | - |
| exon-exon | PHGDH | 1 | - | UBAC2 | 13 | + |
| exon-exon | KIAA1522 | 1 | + | ATP8 | MT | + |
| exon-exon | ZNF790-AS1 | 19 | - | ARPP19 | 15 | - |
| exon-exon | LRRC41 | 1 | + | SERPINB6 | 6 | - |
| exon-intron | PLCXD1 | Y | + | GTPBP6 | Y | + |
| exon-exon | ANXA10 | | + | PTMAP2 | 5 | + |
| exon-intron | MED7 | 5 | - | HAVCR2 | 5 | - |
| exon-exon | HP | 16 | + | ALDOB | 9 | - |
| exon-exon | B3GAT3 | 11 | - | GANAB | 11 | - |
| exon-exon | HMGA1 | 6 | + | MLH1 | 3 | + |
| exon-exon | AKAP12 | 6 | + | ND1 | MT | + |
| exon-exon | ABCF1 | 6 | + | ND4 | MT | + |
| exon-exon | TNRC18 | 7 | + | EIF5 | 14 | + |
| exon-exon | SIGMAR1 | 9 | - | SNU13 | 22 | - |
| exon-exon | CYTB | MT | - | RPL27 | 17 | + |
| exon-exon | KPNA2 | 17 | + | TCEAL9 | X | + |
| exon-exon | ABCC5 | 3 | - | TGFBI | 5 | + |
| exon-exon | MAN2B1 | 19 | + | NDUFB11 | X | - |
| exon-exon | HP | 16 | + | CFB | 6 | + |
| exon-intron | CCDC183 | 9 | + | RABL6 | 9 | + |
| exon-exon | FTL | 19 | - | H3P6 | 2 | + |
| exon-exon | CIC | 19 | - | NUCKS1 | 1 | - |
| exon-intron | ATP5F1A | 18 | + | BAIAP2L1 | 7 | - |
| exon-exon | PNMA1 | 14 | - | ND3 | MT | + |
| exon-exon | COPS7A | 12 | - | GRINA | 8 | + |
| exon-intron | DENR | 12 | + | ABCB9 | 12 | + |
| intron-exon | MTCO1P12 | 1 | - | RCAN1 | 21 | - |
| exon-exon | PLXNA4 | | + | ARMC8 | 3 | + |
| intron-exon | PPAN-P2RY11 | 19 | - | SLC6A2 | 16 | + |
| exon-exon | PITX2 | 4 | - | PPP1R15A | 19 | + |
| exon-exon | VPS4A | 16 | - | LGMN | 14 | - |
| exon-exon | RPL30 | 8 | + | EEF1DP1 | 19 | + |
| exon-exon | ALYREF | 17 | + | PRDX3 | 10 | - |
| exon-exon | DNAAF5 | 7 | + | AGPS | 2 | + |
| exon-intron | IDH3G | X | + | RPL9P8 | 15 | - |
| exon-exon | GAB2 | 11 | - | GAL | 11 | + |
| exon-exon | ALAD | 9 | - | ESRP2 | 16 | - |
| exon-exon | HAND2-AS1 | 4 | - | COX1 | MT | + |
| exon-exon | NCLN | 19 | + | ND1 | MT | + |
| exon-exon | COX8A | 11 | - | SHMT2 | 12 | + |
| exon-exon | IMPDH2 | 3 | - | ND2 | MT | + |
| exon-exon | PLXNB3 | X | - | ND1 | MT | + |
| exon-intron | USP22 | 17 | - | CCDC144NL | 17 | - |
| exon-intron | GPR87 | 3 | - | ADCY10P1 | 6 | - |
| exon-intron | MYL3 | 3 | - | KCNC2 | 12 | + |
| exon-intron | IGHJ3 | 14 | - | IGHM | 14 | - |
| exon-exon | RPL28 | 19 | - | TPI1P1 | 1 | + |
| exon-intron | ATP5F1D | 19 | - | RPSAP19 | 1 | - |
| intron-exon | MRPL23 | 11 | + | RPSAP58 | 19 | + |
| exon-intron | ND5 | MT | - | ND4 | MT | + |
| exon-exon | E2F4 | 16 | + | RPL14 | 3 | + |
| exon-exon | SNX5 | 20 | + | SFT2D1 | 6 | - |
| exon-exon | TGFBRAP1 | 2 | - | RPLP2 | 11 | + |
| exon-exon | CROCCP2 | 1 | - | LOC105376794 | | - |
| exon-exon | PPP2R2D | 10 | + | CPNE2 | 16 | + |
| exon-exon | DPYSL2 | 8 | + | SDF2L1 | 22 | + |
| exon-exon | MYOT | 5 | + | MALAT1 | 11 | + |
| exon-exon | KDM5D | Y | - | PRDX5 | 11 | + |
| exon-exon | HINT1 | 5 | + | MYL12A | 18 | + |
| exon-exon | SAMD4A | 14 | - | SAMD4A | 14 | + |
| exon-intron | ACKR2 | 3 | + | KRBOX1 | 3 | + |
| exon-intron | NELFE | | - | LOC107986291 | | + |
| exon-intron | CLCN7 | | - | FUT3 | 19 | - |
| exon-intron | MCM7 | 7 | + | BAIAP2L1 | 7 | - |
| exon-intron | CYC1 | 8 | - | LOC105371574 | 17 | - |
| exon-exon | EIF1 | 17 | - | CCNB2 | | + |
| intron-exon | IGH | 14 | - | IGHV4-34 | 14 | - |
| exon-exon | ANKRD10 | 13 | - | PKMYT1 | 16 | - |
| exon-exon | NME4 | 16 | + | DECR2 | 16 | + |
| exon-exon | CCNY | 10 | - | ACTN1 | 14 | - |
| intron-exon | GPR135 | | - | COX1 | MT | + |
| exon-exon | HNRNPA3P6 | 3 | + | ND5 | MT | + |
| intron-exon | KDM1B | 6 | + | DENR | 12 | + |
| exon-exon | RPL7AP50 | 10 | + | RDX | 11 | - |
| intron-exon | PPIAP22 | 21 | - | RTN4 | 2 | - |
| exon-exon | CCDC174 | 3 | + | TMEM135 | 11 | + |
| exon-exon | MTIF3 | 13 | + | MCM2 | 3 | + |
| exon-exon | IGLV1-40 | 22 | + | IGLL5 | 22 | + |
| exon-exon | VPS52 | 6 | - | EEF1A1P11 | 1 | + |
| exon-exon | LDHB | 12 | + | CXXC5 | | + |
| exon-intron | RNU6-7 | 14 | + | WDR90 | 16 | + |
| exon-exon | TIMP3 | 22 | + | ND2 | MT | + |
| exon-exon | CMTM1 | 16 | + | RHOQ | 2 | + |
| exon-exon | KIAA1549 | 7 | + | GTF3A | 13 | + |
| exon-exon | ALKBH6 | 19 | - | SYNE4 | | - |
| exon-intron | GNB1 | 1 | + | DAD1 | 14 | - |
| exon-intron | BRK1 | 3 | - | ZBTB46 | 20 | + |
| intron-exon | PHYHIP | 8 | - | OSER1 | 20 | - |
| exon-exon | GAPDH | 12 | + | PEA15 | 1 | + |
| exon-exon | LMO2 | 11 | - | RNF126 | 19 | - |
| intron-exon | RABEP1 | 17 | + | OTULIN | 5 | + |
| exon-exon | BCAM | 19 | + | ATP8 | MT | + |
| exon-intron | IFI6 | 1 | + | RP11-61K9.3 | | + |
| exon-intron | CREB3L1 | 11 | + | ICA1L | 2 | - |
| intron-exon | AC062015.1 | | - | LOC646736 | | - |
| exon-intron | LOC100288798 | 12 | + | AC008014.1 | | + |
| exon-intron | HEATR3 | | + | ZNF398 | | - |
| exon-exon | PPIC | 5 | - | TBC1D16 | 17 | - |
| exon-intron | MILR1 | 17 | + | PLEKHM1P1 | | + |
| exon-exon | PRNP | 20 | + | LOC100507516 | 8 | - |
| exon-exon | MRFAP1 | 4 | + | KDELR2 | 7 | - |
| exon-exon | ND1 | MT | - | RACK1 | 5 | - |
| exon-intron | EIF3A | 10 | - | RPL7P9 | 1 | - |
| exon-intron | LRFN1 | | - | ZNF331 | 19 | - |
| exon-exon | BOLA2-SMG1P6 | 16 | + | MLPH | 2 | + |
| exon-exon | PNLIP | 10 | + | CPB1 | 3 | + |
| exon-exon | CALML4 | 15 | + | CALML4 | 15 | - |
| exon-exon | MTMR9LP | 1 | - | EIF3I | 1 | + |
| exon-exon | RFK | 9 | - | LYZ | 12 | + |
| exon-exon | CREB3L2 | 7 | - | ATP8 | MT | + |
| intron-exon | TMX2-CTNND1 | 11 | - | RRP8 | | - |
| exon-exon | RPL10P16 | 19 | + | POLA2 | 11 | + |
| exon-exon | ZKSCAN5 | 7 | + | PTMA | 2 | + |
| exon-exon | TBC1D10B | 16 | - | PPIAP22 | 21 | + |
| intron-exon | PDXDC1 | 16 | + | SMARCC2 | 12 | - |
| exon-exon | TRIM63 | 1 | - | PTMA | 2 | + |
| exon-exon | FLCN | 17 | - | IFNAR1 | 21 | + |
| intron-exon | DHX8 | | + | RAD23B | 9 | + |
| exon-exon | LOC107984037 | 22 | + | LOC101928041 | 22 | + |
| exon-exon | ZC3H7B | 22 | + | CBY1 | 22 | + |
| exon-exon | TMEM161A | 19 | - | COQ8B | 19 | - |
| exon-exon | GTF2H3 | 12 | + | LIG3 | 17 | + |
| exon-exon | CBL | 11 | - | SLC25A1 | 22 | - |
| exon-exon | RBFA | 18 | + | RBFADN | 18 | + |
| exon-intron | ZMIZ2 | 7 | + | PTCHD1-AS | X | + |
| exon-exon | TMPO | 12 | + | ARMCX5-GPRASP2 | X | + |
| exon-exon | DUSP8 | 11 | + | RPS3P3 | 3 | + |
| exon-intron | INTS11 | 1 | + | RPL7P9 | 1 | - |
| intron-exon | ZNF850 | 19 | - | SMG1 | 16 | - |
| exon-exon | HERC1 | 15 | - | CIAO2A | 15 | - |
| exon-exon | RAB36 | 22 | + | TMSB10 | 2 | + |
| exon-intron | PVT1 | 8 | + | KB-1568E2.1 | 8 | - |
| exon-exon | PHC1 | 12 | + | SEC63 | 6 | - |
| exon-exon | METTL2A | 17 | + | PAXBP1 | 21 | - |
| exon-exon | CC2D2A | 4 | + | FANCF | 11 | - |
| intron-exon | ALCAM | 3 | + | LYZ | 12 | + |
| intron-exon | RPSAP52 | 12 | + | HMGA2 | 12 | + |
| exon-intron | MIF | 22 | + | TPRKB | 2 | - |
| exon-exon | IPO8 | | + | IPO8 | | - |
| exon-exon | TM9SF4 | 20 | - | OSER1 | 20 | - |
| exon-intron | PVT1 | 8 | + | LINC02055 | 8 | - |
| exon-exon | GIGYF1 | 7 | - | GIGYF1 | 7 | + |
| intron-exon | PRKAR1B | 7 | + | CDC42 | 1 | + |
| exon-exon | RETREG2 | 2 | + | MKLN1 | 7 | + |
| exon-intron | IGLC2 | 22 | + | IGL | 22 | + |
| exon-exon | TMEM94 | 17 | - | PRKD2 | 19 | - |
| exon-exon | NSUN7 | 4 | + | CCNB1 | 5 | + |
| exon-exon | UNC5B | 10 | + | ND4 | MT | + |
| exon-exon | C1orf116 | 1 | + | C1orf116 | 1 | - |
| exon-exon | ST3GAL2 | 16 | - | RPL26L1 | | + |
| exon-exon | TTYH3 | 7 | + | WDR34 | 9 | - |
| exon-exon | UBA52 | 19 | - | ACTG1 | 17 | - |
| exon-exon | SMOX | 20 | - | URM1 | 9 | + |
| exon-intron | CCDC58 | 3 | - | LOC105374655 | | - |
| exon-exon | EIF3M | 11 | - | SYNCRIP | 6 | - |
| exon-exon | TULP3 | 12 | - | TULP3 | 12 | + |
| exon-exon | PRICKLE2 | 3 | - | TCEA3 | 1 | - |
| exon-exon | MAP1A | 15 | + | WDR31 | 9 | - |
| intron-exon | PLEKHA7 | 11 | + | HDAC7 | 12 | - |
| exon-intron | IGLV4-3 | | + | IGL | 22 | + |
| exon-exon | DCTN1 | 2 | - | NCOR2 | 12 | - |
| intron-exon | KIFC3 | 16 | - | EARS2 | 16 | - |
| exon-exon | PRR16 | 5 | + | CSNK1G3 | 5 | + |
| exon-exon | G6PC | 17 | + | HP | 16 | + |
| exon-exon | FGB | 4 | + | GNAS | 20 | + |
| exon-intron | LYST | 1 | - | GPCPD1 | 20 | + |
| exon-exon | SLC12A1 | 15 | + | CHCHD2P6 | 1 | + |
| intron-exon | PID1 | 2 | - | SKIL | 3 | + |
| exon-exon | SHCBP1 | 16 | - | JCHAIN | 4 | - |
| exon-exon | CTR9 | 11 | + | ATG4C | 1 | + |
| exon-exon | CCNB1IP1 | 14 | + | ARF3 | 12 | - |
| exon-exon | PSMC1P1 | 3 | - | PPFIA1 | 11 | + |
| exon-exon | RACK1 | 5 | + | ATP1A1 | 1 | + |
| exon-exon | ACTB | 7 | + | TIMM10B | | + |
| exon-exon | BVES | 6 | + | EMC3 | 3 | - |
| exon-exon | PIM3 | 22 | - | GARS1 | 7 | + |
| exon-exon | WDR46 | 6 | + | TIMM17A | | + |
| exon-exon | TMEM131L | 4 | + | SLC30A5 | 5 | + |
| exon-intron | GTSE1 | 22 | + | TRMU | 22 | + |
| exon-exon | RBSN | 3 | - | COX2 | MT | + |
| exon-intron | COPG1 | 3 | - | HOXC9 | 12 | + |
| exon-exon | RIPOR1 | 16 | + | ATP8 | MT | + |
| exon-exon | CCDC137 | 17 | - | RPL13AP5 | 10 | + |
| exon-intron | PTTG1IP | 21 | + | DIP2C | 10 | - |
| intron-exon | AC011997.1 | | + | BOLL | | + |
| exon-exon | L1CAM | X | - | COX3 | MT | + |
| exon-exon | RPL27 | 17 | - | RPL27 | 17 | + |
| exon-exon | EIF2S3 | X | - | COX3 | MT | + |
| exon-intron | ARHGEF3 | 3 | - | CNTNAP2 | 7 | - |
| exon-exon | CCDC6 | 10 | - | BRIX1 | 5 | + |
| exon-exon | BTF3L4 | 1 | + | LOC100287402 | 3 | + |
| exon-exon | ESCO1 | 18 | - | FAM210A | 18 | - |
| exon-exon | TP53INP2 | 20 | - | ERGIC1 | 5 | + |
| exon-intron | NBEAL1 | 2 | - | EIF4HP1 | 7 | - |
| exon-intron | BTBD7 | 14 | + | EEF1A1P6 | 7 | - |
| exon-exon | PRELID1P1 | 6 | - | TUFM | 16 | - |
| exon-exon | TIGD5 | 8 | - | COX1 | MT | + |
| exon-exon | RPL31 | 2 | + | SRP9P1 | 10 | - |
| exon-exon | TEX44 | 2 | + | GABARAP | 17 | - |
| exon-intron | IGHJ2 | 14 | - | IGHG1 | 14 | - |
| exon-exon | OAZ1 | 19 | - | TXNL1 | 18 | - |
| exon-intron | PLEKHA4 | 19 | - | IFIH1 | 2 | - |
| exon-exon | ZFAT | 8 | - | S100A1 | 1 | + |
| exon-exon | TRAJ42 | 14 | + | TRAC | 14 | + |
| exon-exon | FZD4 | 11 | - | MGP | 12 | - |
| exon-intron | RNA45SN2 | 21 | + | CLEC12A | 12 | + |
| intron-exon | HTR1F | 3 | + | SRSF10 | 1 | - |
| exon-exon | NDUFA8 | 9 | + | POLR2F | 22 | - |
| exon-intron | AVL9 | | + | NT5C3A | 7 | + |
| intron-exon | TMSB15B | X | - | H2BW3P | X | - |
| exon-exon | NLRP1 | | - | LOC728392 | | - |
| exon-exon | TNFRSF13B | 17 | - | NBEAL2 | 3 | + |
| exon-exon | PGRMC2 | 4 | - | IRF2BP2 | 1 | - |
| exon-exon | ATOX1 | 5 | + | MAP7D3 | X | - |
| exon-exon | UBE2R2 | 9 | + | KRT1 | 12 | - |
| intron-exon | AC009511.2 | 12 | + | KLHL42 | 12 | + |
| exon-intron | TOB2 | 22 | - | TRNE | MT | + |
| exon-intron | CFHR4 | | + | CFHR1 | 1 | + |
| exon-exon | TTN | 2 | - | UQCRC1 | 3 | - |
| exon-exon | SLC25A3 | 12 | + | UBE2QL1 | 5 | + |
| intron-exon | GIMAP1-GIMAP5 | 7 | + | PTPRM | 18 | + |
| exon-exon | ZNF573 | 19 | - | LOC105372482 | 19 | - |
| exon-exon | NEAT1 | 11 | + | AMPD2 | 1 | + |
| exon-exon | BRDT | 1 | + | LANCL2 | 7 | + |
| exon-exon | RABL6 | 9 | - | AK2 | 1 | - |
| exon-exon | TGFBR3 | 1 | - | FGD3 | 9 | + |
| exon-exon | PGGHG | 11 | + | WBP2 | 17 | - |
| exon-intron | SLC35E1 | 19 | - | BEND4 | 4 | + |
| intron-exon | CCDC200 | 17 | - | MCM3AP | 21 | - |
| exon-exon | SRCAP | 16 | + | DNAJC7 | 17 | - |
| intron-exon | LOC105374781 | | + | LOC101927533 | 2 | + |
| exon-exon | PCBP2 | 12 | + | CDK11B | 1 | - |
| exon-exon | MIS18A | 21 | - | CYC1 | 8 | + |
| intron-exon | NCOR2 | 12 | - | RPL14P1 | 12 | + |
| exon-exon | IGLV2-8 | 22 | + | IGLL5 | 22 | + |
| exon-intron | IGHJ2 | 14 | - | IGHG3 | 14 | - |
| exon-intron | CDC42BPB | 14 | + | LINC02613 | 2 | + |
| exon-exon | SARDH | 9 | + | SARDH | 9 | - |
| exon-intron | FGD5-AS1 | 3 | - | FGD5 | 3 | - |
| exon-intron | PLCXD1 | Y | + | GTPBP6 | Y | + |
| intron-exon | DENND6A | | - | TMEM30B | | - |
| exon-exon | ZNF696 | 8 | + | ZC3H3 | 8 | - |
| exon-exon | SFT2D2 | 1 | + | GORAB | 1 | + |
| exon-intron | MIR202HG | 10 | - | AC091576.1 | | + |
| intron-exon | AC044839.3 | | + | CRY2 | 11 | + |
| exon-exon | LOC105377622 | 4 | - | KBTBD2 | 7 | - |
| exon-intron | LOC107986119 | | + | AC092910.3 | 3 | + |
| intron-exon | TRB | 7 | + | TRBV7-6 | | + |
| intron-exon | AC087741.3 | | + | POM121L8P | 22 | + |
| intron-exon | GUSBP16 | 5 | + | NAIPP1 | 5 | + |
| exon-intron | RPL31 | 2 | - | NPAS2 | 2 | - |
| intron-exon | TAOK3 | 12 | - | DLL3 | 19 | + |
| exon-exon | LOC107985946 | 2 | + | UBXN4 | 2 | + |
| exon-exon | TRAJ17 | 14 | + | TRAC | 14 | + |
| intron-exon | LINC01280 | | + | PSMB3P2 | | + |
| intron-exon | CPPED1 | | + | DTD2 | | - |
| exon-exon | FHL2 | 2 | - | C2orf49 | 2 | - |
| exon-intron | LINC00624 | 1 | - | CHD1L | 1 | - |
| exon-exon | MEMO1 | 2 | - | MEMO1 | 2 | + |
| intron-exon | LOC100419741 | | - | LOC105377548 | | - |
| exon-intron | ZNF709 | 19 | - | AC008758.6 | 19 | - |
| exon-intron | ZNF606 | 19 | - | C19orf18 | | - |
| exon-exon | PIP4K2A | 10 | - | RPS6KC1 | 1 | + |
| exon-exon | PRR34-AS1 | 22 | + | MIRLET7BHG | 22 | + |
| exon-exon | ZSCAN25 | 7 | + | CUX1 | 7 | + |
| intron-exon | PDCD1LG2 | 9 | - | PLGRKT | 9 | - |
| exon-exon | EPHA4 | | - | RSPH6A | | - |
| exon-exon | ANKRD52 | 12 | - | RPS21 | 20 | + |
| intron-exon | TUBA1B | 12 | + | LOC105369760 | 12 | + |
| intron-exon | PRKACB | 1 | + | IVD | 15 | + |
| exon-intron | LOC105371855 | | + | AL022324.4 | | - |
| exon-exon | ADPGK | 15 | - | MRPS16 | 10 | - |
| exon-exon | TOP2B | 3 | - | SIMC1 | 5 | + |
| exon-exon | CREB3L2 | 7 | - | CDKN1A | 6 | + |
| exon-intron | LOC105369203 | 15 | - | LOC107983974 | 15 | - |
| exon-exon | TMEM104 | 17 | + | PTPA | 9 | + |
| exon-intron | LINC02087 | | - | UBE2R2 | 9 | + |
| exon-exon | MICALCL | 11 | + | LPO | 17 | + |
| exon-intron | ALKBH5 | 17 | - | MYO15A | | - |
| exon-intron | RCAN2 | | - | LOC107984390 | | + |
| exon-intron | LOC105374685 | | + | CDH12 | 5 | + |
| intron-exon | NUP107 | 12 | - | LOC100507250 | | - |
| intron-exon | LINC02226 | | + | MIR4458HG | | + |
| exon-exon | H2BC4 | 6 | - | SECISBP2 | 9 | + |
| exon-intron | EXOSC6 | 16 | - | LOC100128993 | 8 | - |
| exon-exon | PIGF | 2 | - | DGLUCY | 14 | + |
| exon-intron | LINC01641 | | + | RPS18P3 | | + |
| exon-intron | LOC105373418 | | + | AC082651.1 | 2 | + |
| intron-exon | AP001189.1 | 11 | + | LOC107984360 | 11 | + |
| intron-exon | AC093459.1 | 2 | + | CSTF3 | 11 | - |
| exon-exon | THAP5 | 7 | - | RSL1D1 | 16 | - |
| exon-exon | AIP | 11 | + | TLE5 | 19 | + |
| intron-exon | LDLRAD4 | 18 | + | FAM177A1 | 14 | + |
| exon-exon | UBN2 | 7 | + | FUNDC2P2 | 2 | + |
| intron-exon | LINC00534 | 8 | + | LOC102724670 | 8 | + |
| intron-exon | MARK1 | 1 | + | STMN1 | 1 | - |
| exon-exon | LOC105371723 | 17 | + | AGK | 7 | + |
| exon-intron | ECI2 | | + | ECI2-DT | | + |
| intron-exon | BFSP2 | 3 | - | LOC101927432 | 3 | - |
| exon-intron | DOCK6 | 19 | + | LOC105372273 | | + |
| exon-exon | ABCA2 | 9 | - | SYAP1 | X | + |
| exon-exon | RASAL2 | 1 | - | RASAL2 | 1 | + |
| exon-intron | LOC102724449 | | - | AP000253.1 | | - |
| exon-intron | LOC107984307 | | + | RIC3 | 11 | + |
| exon-intron | SNHG27 | 4 | + | LOC105372733 | | + |
| intron-exon | AC087289.2 | 17 | + | MRPL38 | 17 | + |
| exon-exon | CYTH2 | 19 | - | KCNJ14 | 19 | - |
| exon-intron | IGHJ2P | 14 | - | CASC11 | 8 | - |
| exon-exon | AHDC1 | 1 | - | TMSB10 | 2 | + |
| intron-exon | MAP4K3 | 2 | + | MAP4K3-DT | 2 | + |
| exon-intron | TMEM35B | 1 | - | LOC653160 | 1 | - |
| exon-exon | RNU6-5P | 2 | - | MEIS3 | 19 | - |
| intron-exon | AC005537.1 | | - | LOC105375253 | | - |
| exon-exon | MON2 | 12 | + | CHGB | 20 | + |
| intron-exon | RSU1P2 | | + | ANKRD30BP3 | | + |
| intron-exon | AL390728.3 | 1 | - | LOC105372582 | 20 | + |
| intron-exon | CHST9 | | + | LOC107985143 | | + |
| exon-intron | LOC105373895 | | + | AC067956.1 | | + |
| exon-intron | LOC105372762 | 21 | - | AP001605.1 | 21 | - |
| intron-exon | STXBP5-AS1 | | + | STXBP5 | | + |
| exon-intron | IQSEC2 | | - | LOC105370787 | | + |
| exon-exon | GJA9-MYCBP | 1 | - | RRAGC | 1 | - |
| exon-intron | ZC3H8 | 2 | - | FBLN7 | 2 | - |
| exon-intron | CD44 | 11 | - | LOC105371574 | 17 | - |
| exon-exon | LIMK1 | | - | RPS3AP6 | 15 | + |
| exon-intron | LINC00691 | | - | NPM1P23 | | - |
| exon-intron | DCP2 | 5 | + | MCC | 5 | + |
| exon-exon | LRCH4 | 7 | - | SAP25 | | - |
| exon-exon | ZC3H11A | 1 | + | LYRM2 | 6 | - |
| exon-exon | SMC1A | X | - | XIAP | X | + |
| exon-exon | PMS2P3 | 7 | - | RPL38 | 17 | + |
| intron-exon | SH3PXD2A | 10 | - | ERC2 | 3 | - |
| exon-exon | RRBP1 | 20 | - | RUFY1 | 5 | + |
| intron-exon | AC010894.3 | | + | LOC105373750 | | + |
| intron-exon | TRR-ACG2-1 | 3 | - | LIMD1-AS1 | | - |
| exon-exon | ARID4A | 14 | + | PSMA3 | 14 | + |
| intron-exon | CDH12 | 5 | - | HSPD1P4 | 12 | + |
| exon-intron | LOC112268270 | 20 | + | LOC105372687 | | + |
| exon-exon | TTC7A | 2 | + | CD37 | 19 | + |
| exon-intron | PMS2P2 | 7 | - | PMS2P6 | 7 | + |
| intron-exon | H6PD | 1 | + | METTL16 | 17 | - |
| exon-intron | LOC105377134 | 21 | + | ERLEC1P1 | 21 | + |
| exon-exon | GOLGA3 | 12 | - | RPS26P8 | 17 | + |
| exon-exon | HK1 | 10 | - | GNL1 | 6 | - |
| exon-exon | RAPH1 | 2 | - | PRXL2A | 10 | + |
| exon-intron | LOC107987170 | 12 | + | DEFB125 | 20 | + |
| exon-exon | HNRNPUL2-BSCL2 | 11 | - | RPL22L1 | 3 | - |
| exon-intron | PRORP | | + | PSMA6 | 14 | + |
| exon-intron | MICB | 6 | + | PRRC2A | 6 | + |
| exon-exon | H2AZ1 | 4 | - | CD59 | 11 | - |
| exon-exon | FTL | 19 | + | GBP4 | 1 | - |
| exon-exon | RNA45SN1 | 21 | + | ND1 | MT | + |
| exon-intron | PRDM2 | 1 | + | NRG1 | 8 | + |
| exon-exon | NCOR2 | 12 | - | RPL14 | 3 | + |
| intron-exon | KRT18 | 12 | + | PKM | 15 | - |
| exon-exon | HMGA1P3 | 12 | + | RPL18 | 19 | - |
| exon-intron | PDXDC2P-NPIPB14P | 16 | - | LTBP1 | 2 | + |
| exon-exon | CARD10 | 22 | - | MFNG | | - |
| exon-exon | EPN2 | | + | ND4 | MT | + |
| exon-exon | SNX27 | 1 | + | C9orf78 | 9 | - |
| intron-exon | MIR614 | 12 | + | GPRC5A | 12 | + |
| exon-exon | TUBG2 | 17 | + | H19 | 11 | - |
| exon-intron | NFIX | 19 | + | CHCHD3 | 7 | - |
| exon-exon | PIK3R2 | 19 | + | CDKN2A | 9 | - |
| exon-exon | ADGRB2 | 1 | - | SLC3A2 | 11 | + |
| exon-exon | DDX19B | 16 | + | HNRNPM | 19 | + |
| exon-intron | LINC00312 | 3 | + | ATF4P1 | X | - |
| exon-exon | CAMSAP2 | 1 | - | CAMSAP2 | 1 | + |
| exon-exon | F11R | 1 | - | GOLGB1 | 3 | - |
| exon-exon | DOCK5 | 8 | - | DOCK5 | 8 | + |
| exon-exon | LINC00652 | 20 | - | DNM3 | 1 | + |
| exon-exon | LOC107987135 | 9 | - | PRRC2B | 9 | + |
| intron-exon | AC096574.4 | 2 | + | PER2 | 2 | + |
| exon-exon | PTCH1 | 9 | + | PTCH1 | 9 | - |
| exon-intron | MAFK | 7 | + | DAB2IP | 9 | - |
| exon-exon | ND1 | MT | + | ND4 | MT | + |
| exon-intron | SLC31A1 | 9 | + | CDC26 | 9 | + |
| exon-intron | TP73-AS1 | 1 | - | RABGEF1 | 7 | + |
| exon-intron | ZNF394 | 7 | - | RIN3 | 14 | + |
| exon-exon | ASH1L | 1 | - | RAB1A | 2 | - |
| exon-exon | LOC100996442 | 1 | - | CAMK1 | 3 | - |
| exon-exon | AGAP11 | 10 | + | FAM25A | 10 | + |
| intron-exon | TRA | 14 | + | TRAC | 14 | + |
| exon-exon | AKT1 | 14 | - | PPP3R1 | 2 | - |
| intron-exon | RPL31P4 | 14 | - | SRSF2 | 17 | - |
| exon-intron | LOC100996724 | | - | NBPF8 | 1 | - |
| exon-intron | TNPO2 | 19 | - | MIR12136 | 1 | + |
| exon-exon | ZNF597 | 16 | - | PKD1P3-NPIPA1 | 16 | + |
| intron-exon | DENND2C | | - | BCAS2 | 1 | - |
| exon-exon | OASL | 12 | + | CORO1A | 16 | + |
| exon-exon | PAFAH1B2 | 11 | + | FOXR1 | 11 | + |
| exon-exon | GOLGA8A | 15 | - | SLC25A6 | X | - |
| intron-exon | SUDS3 | 12 | + | PCK2 | 14 | + |
| exon-intron | PML | 15 | + | DRAIC | | + |
| exon-exon | DYNC1LI1 | 3 | - | ZRANB3 | 2 | - |
| exon-exon | VPS13C | 15 | - | RAB40C | 16 | + |
| exon-exon | MAL2 | 8 | + | P3H1 | 1 | - |
| exon-exon | VHL | 3 | - | SSR4 | X | + |
| exon-exon | DDX6 | 11 | - | RAB7A | 3 | + |
| exon-exon | BRD3OS | 9 | + | BRD3 | 9 | + |
| exon-exon | TOR1AIP2 | 1 | - | LOC107984703 | 14 | + |
| exon-exon | MON2 | 12 | + | ATP8 | MT | + |
| exon-intron | LOC107987272 | 19 | + | CENPBD1P1 | 19 | + |
| intron-exon | LOC105375228 | 7 | + | PEG10 | 7 | + |
| exon-exon | PGP | 16 | + | CSNK1D | 17 | - |
| exon-exon | CCNYL1 | 2 | + | IDH1 | 2 | - |
| exon-exon | UBAP1L | 15 | + | UBAP1L | 15 | - |
| exon-exon | FGFR1OP2 | 12 | + | SMARCA2 | 9 | + |
| exon-intron | CSNK1A1P1 | | - | CDIN1 | | - |
| exon-intron | WHAMMP3 | | + | CTD-3092A11.1 | 15 | + |
| exon-exon | MDM2 | 12 | + | SOGA1 | 20 | - |
| exon-intron | AIDA | | - | MIA3 | 1 | - |
| exon-exon | EEF2 | 19 | - | CSNK1D | 17 | - |
| exon-intron | C5orf24 | 5 | + | LINC01492 | 9 | + |
| exon-intron | ATP6V1FNB | 7 | - | CKLF | 16 | + |
| exon-intron | PABPC1L | 20 | + | TOMM34 | 20 | + |
| exon-intron | RDH13 | 19 | - | LOC107985325 | 19 | - |
| exon-exon | TECR | 19 | + | GPBP1 | 5 | + |
| exon-exon | MSL3P1 | | - | SRP9P1 | 10 | - |
| exon-exon | SAA1 | 11 | + | GYS2 | 12 | - |
| exon-exon | SAA2-SAA4 | 11 | - | BCL6 | 3 | - |
| exon-intron | RPL21P28 | 1 | - | DTL | 1 | - |
| exon-exon | TRAJ57 | | + | TRAC | 14 | + |
| exon-intron | C19orf25 | 19 | - | APC2 | 19 | - |
| exon-intron | LOC100996723 | 1 | + | AC245297.3 | 1 | - |
| intron-exon | FBXO10 | 9 | - | NF2 | 22 | + |
| exon-exon | PRM1 | 16 | - | CDYL2 | | - |
| exon-exon | TRAJ27 | 14 | + | TRAC | 14 | + |
| exon-exon | UBE2L6 | 11 | - | INTS6L | X | + |
| exon-exon | HECTD2 | 10 | + | TXNDC12 | 1 | - |
| intron-exon | DSC3 | 18 | + | DSG2 | 18 | + |
| intron-exon | PPP1R14BP2 | 2 | - | PSMD8 | 19 | + |
| exon-exon | FOXO6 | 1 | - | ZNF668 | 16 | - |
| exon-exon | EID2 | 19 | + | EID2 | 19 | - |
| exon-exon | RNA45SN1 | 21 | - | IGSF3 | 1 | - |
| intron-exon | CTTNBP2NL | 1 | - | TUBB4B | 9 | + |
| exon-intron | INPPL1 | 11 | - | FAM172A | 5 | - |
| exon-intron | NUP188 | 9 | - | PCNP | 3 | - |
| intron-exon | GCNT7 | 20 | - | CALR | 19 | + |
| exon-exon | SKI | 1 | - | LDHA | 11 | + |
| intron-exon | ABCA2 | 9 | - | C22orf39 | 22 | - |
| exon-exon | CDYL | 6 | + | CENPQ | 6 | + |
| exon-exon | CAMK1D | 10 | - | CAMK1D | 10 | + |
| exon-exon | ZFYVE16 | 5 | - | GOT1 | 10 | - |
| intron-exon | TULP4 | 6 | - | RACK1 | 5 | - |
| exon-exon | ZYX | 7 | - | SH3GL1 | 19 | - |
| exon-intron | MFSD14A | 1 | + | FOXO3B | 17 | + |
| exon-exon | OGT | X | + | BAG1 | 9 | - |
| exon-exon | ASNSD1 | 2 | + | SUPT6H | 17 | + |
| exon-exon | EIF3CL | 16 | - | SETD3 | 14 | - |
| exon-intron | NEMF | 14 | - | FN1 | 2 | - |
| intron-exon | INS-IGF2 | 11 | + | INS-IGF2 | 11 | - |
| exon-intron | CACNA2D4 | 12 | + | HMGN2P7 | 3 | - |
| exon-exon | LLGL1 | 17 | - | KMT2B | 19 | + |
| exon-intron | AGO2 | 8 | + | HSFY4P | Y | - |
| exon-exon | NOL7 | 6 | - | PLEKHJ1 | 19 | - |
| exon-exon | FAM133DP | 2 | - | CPM | 12 | - |
| exon-exon | GCN1 | 12 | + | TXNL4A | 18 | - |
| exon-intron | MRPL57 | 13 | - | RPL13P12 | 17 | - |
| exon-exon | JUND | 19 | - | NASP | 1 | + |
| exon-exon | PRIMA1 | 14 | + | NTPCR | 1 | + |
| exon-exon | PCAT7 | 9 | + | CHP1 | 15 | + |
| exon-exon | HS3ST3A1 | 17 | + | GSTO1 | 10 | + |
| exon-exon | ITPK1 | 14 | - | EHBP1L1 | 11 | + |
| intron-exon | NPAS2 | 2 | - | TCEA2 | 20 | + |
| exon-intron | INAFM1 | 19 | - | RPSAP17 | 1 | - |
| exon-exon | CCDC144NL-AS1 | | + | RFX1 | 19 | - |
| exon-exon | SLC9A1 | 1 | + | PA2G4 | 12 | + |
| exon-intron | POLR3H | 22 | - | ASIP | 20 | - |
| exon-exon | STX16-NPEPL1 | 20 | + | RNF208 | 9 | - |
| exon-exon | KMT2C | 7 | - | TPTE | | + |
| exon-exon | NCOA2 | 8 | - | COX2 | MT | + |
| exon-intron | COMMD2 | 3 | - | CRYZL1 | 21 | + |
| exon-intron | SLC23A2 | 20 | - | LOC105376126 | 9 | - |
| exon-exon | MYBPC2 | 19 | + | PTGDS | 9 | + |
| exon-exon | ZNHIT6 | 1 | - | ISG20 | 15 | + |
| exon-exon | MAGEA9 | | + | MAGEA8 | X | + |
| intron-exon | LOC112268284 | 21 | - | POLR3H | 22 | - |
| exon-exon | TRDV2 | 14 | + | TRAC | 14 | + |
| intron-exon | LOC648987 | 5 | + | LOC153684 | 5 | + |
| exon-intron | FGA | 4 | - | APH1B | | - |
| exon-exon | COPS6 | 7 | + | TIMM50 | 19 | + |
| exon-exon | XKR4 | 8 | + | KHDRBS3 | 8 | + |
| exon-exon | CEP20 | 16 | - | SLC12A2 | 5 | + |
| exon-exon | KIAA2026 | 9 | - | C2orf74 | 2 | + |
| exon-exon | UHRF1BP1L | 12 | - | PXK | 3 | + |
| exon-intron | SETD1A | 16 | + | ICA1L | 2 | - |
| intron-exon | LRP4 | 11 | - | PSMA3 | 14 | + |
| exon-intron | HACD4 | 9 | - | FOCAD | 9 | - |
| intron-exon | SMURF2P1 | 17 | + | LRRC37BP1 | 17 | + |
| intron-exon | AP001496.2 | | + | LINC00667 | 18 | + |
| intron-exon | AP001496.2 | | + | LINC00667 | 18 | + |
| exon-intron | LOC100507291 | | - | RBP2 | | - |
| exon-exon | KRTAP10-8 | | + | SYNE3 | 14 | + |
| exon-exon | LOC105374772 | | + | LINC02579 | | + |
| exon-intron | LINC01138 | 1 | - | TRN-GTT23-1 | | - |
| exon-exon | WDR33 | 2 | + | SFT2D3 | | + |
| exon-exon | CHD2 | 15 | + | POLI | 18 | + |
| exon-exon | SLC34A2 | 4 | + | ZBTB43 | 9 | + |
| exon-exon | LRFN2 | 6 | - | UTP15 | 5 | + |
| intron-exon | GLB1 | 3 | - | ELL2 | 5 | - |
| exon-exon | PPT2-EGFL8 | 6 | - | PPT2-EGFL8 | 6 | + |
| exon-exon | PSORS1C1 | 6 | - | CDSN | 6 | - |
| exon-intron | ATP5MC3 | 2 | + | IGH | 14 | + |
| exon-intron | FKBP4 | 12 | + | DIP2C | 10 | - |
| exon-exon | SPOCK2 | 10 | + | SPOCK2 | 10 | - |
| exon-intron | RNA45SN1 | 21 | + | RNR2 | MT | + |
| exon-intron | MRPS18B | 6 | + | LOC101927531 | 12 | - |
| intron-exon | PIK3CB | 3 | - | AP1G2 | 14 | - |
| exon-intron | HMBOX1 | 8 | - | GCC1 | 7 | - |
| exon-intron | SYNCRIP | 6 | - | LPP | 3 | + |
| exon-exon | LOC105378179 | 14 | - | AKR1B10 | 7 | + |
| intron-exon | NEURL1B | 5 | + | MYO1D | 17 | - |
| exon-exon | RND3 | 2 | - | RNF170 | 8 | - |
| exon-exon | SMPD4 | 2 | - | MDH1 | 2 | + |
| exon-exon | PIGR | 1 | - | DPH7 | 9 | - |
| exon-exon | OAS1 | 12 | - | OAS1 | 12 | + |
| exon-exon | NUP160 | 11 | + | NUP160 | 11 | - |
| exon-exon | EEPD1 | 7 | - | EEPD1 | 7 | + |
| exon-exon | RNA45SN2 | 21 | + | ZMYND8 | 20 | - |
| exon-intron | RN7SL396P | 8 | + | ZBTB8A | 1 | + |
| exon-exon | ITGA6 | 2 | - | ITGA6 | 2 | + |
| exon-exon | TRAM1 | 8 | + | TRAM1 | 8 | - |
| exon-exon | MARS1 | 12 | - | MARS1 | 12 | + |
| exon-exon | CCND1 | 11 | + | TACSTD2 | 1 | - |
| exon-exon | USP7 | 16 | - | COX17 | 3 | + |
| intron-exon | LNX1 | 4 | - | NOP14 | 4 | - |
| exon-exon | DYNLL2 | 17 | + | ICAM1 | 19 | + |
| intron-exon | MEI4 | 6 | - | TUT7 | 9 | + |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN1 | 21 | + |
| exon-intron | CEP85L | 6 | - | IL1R2 | 2 | - |
| intron-exon | RANBP17 | 5 | + | ND6 | MT | - |
| intron-exon | EHBP1 | 2 | + | NECTIN4 | 1 | + |
| exon-exon | ND5 | MT | + | ND6 | MT | + |
| exon-exon | RNA45SN2 | 21 | - | ENO1 | 1 | + |
| exon-exon | GABARAPL1 | 12 | - | GABARAPL1 | 12 | + |
| exon-intron | RNA45SN3 | 21 | - | RNA28SP | 21 | - |
| exon-exon | HLA-E | 6 | + | SNHG16 | 17 | + |
| exon-intron | EIF3A | 10 | + | SRGAP2 | 1 | + |
| exon-intron | TPM4 | 19 | + | NFIB | 9 | - |
| exon-exon | LINC01881 | 2 | + | FRYL | 4 | - |
| exon-intron | LINC00174 | 7 | - | GTF2IP9 | 7 | - |
| exon-exon | DST | 6 | + | PKIB | 6 | + |
| exon-intron | LOC340268 | 7 | - | CPAMD8 | 19 | + |
| exon-exon | RNA45SN2 | 21 | - | ELAPOR1 | 1 | + |
| exon-exon | ATP6 | MT | + | ALMS1 | 2 | + |
| exon-exon | COX1 | MT | - | COX1 | MT | + |
| intron-exon | LOC112268024 | 8 | - | RBPMS | 8 | + |
| exon-exon | WEE1 | 11 | - | MICU2 | 13 | + |
| exon-intron | ABL2 | 1 | - | TIAM2 | 6 | + |
| exon-intron | PSMD2 | 3 | + | TTC39C | 18 | + |
| exon-intron | TRIM8 | 10 | - | SCARB1 | 12 | + |
| exon-exon | PSMD2 | 3 | + | PSMD2 | 3 | - |
| intron-exon | RNA18SP5 | 21 | - | RNA45SN2 | 21 | - |
| exon-intron | RNA45SN2 | 21 | - | SUSD1 | 9 | + |
| exon-intron | TOPBP1 | 3 | + | NBPF15 | 1 | + |
| intron-exon | HERPUD2 | 7 | - | RNA45SN1 | 21 | + |
| intron-exon | VPS45 | 1 | + | LIMS1 | 2 | - |
| exon-intron | ZNF106 | 15 | - | SVIL | 10 | + |
| exon-intron | ERICH5 | 8 | + | LHFPL2 | 5 | - |
| exon-exon | NT5DC1 | 6 | - | TNFRSF21 | 6 | - |
| exon-exon | PSMD13 | 11 | + | PSMD13 | 11 | - |
| exon-exon | RACK1 | 5 | - | RACK1 | 5 | + |
| exon-exon | TAPBP | 6 | + | AMFR | 16 | + |
| intron-exon | PPP3CB-AS1 | 10 | + | USP54 | 10 | - |
| exon-exon | COX1 | MT | - | FAM110C | 2 | - |
| intron-exon | HFM1 | 1 | + | POLE | 12 | + |
| exon-intron | RNA45SN3 | 21 | - | LOC112268284 | 21 | - |
| intron-exon | ATL1 | 14 | - | NOP56 | 20 | - |
| exon-exon | UFM1 | 13 | + | UFM1 | 13 | - |
| exon-exon | DNAJC3 | 13 | - | NPC2 | 14 | + |
| intron-exon | LOC107986574 | 6 | + | SOX9 | 17 | - |
| intron-exon | LOC107985139 | 18 | + | ZNF24 | 18 | - |
| exon-exon | GTF2E2 | 8 | - | GTF2E2 | 8 | + |
| intron-exon | ERAP1 | 5 | - | ACACA | 17 | - |
| exon-exon | LUZP1 | 1 | + | ZCCHC10 | 5 | + |
| exon-exon | RPLP0 | 12 | + | RPLP0 | 12 | - |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | ABCE1 | 4 | - | ABCE1 | 4 | + |
| intron-exon | RNR2 | MT | - | SLC44A2 | 19 | + |
| exon-exon | BAZ1A | 14 | - | MYO1E | 15 | + |
| exon-exon | OXSR1 | 3 | - | CALR | 19 | - |
| exon-exon | MPZL1 | 1 | + | MPZL1 | 1 | - |
| intron-exon | SNX19 | 11 | + | SRSF3 | 6 | - |
| intron-exon | LINC01619 | 12 | - | CYTB | MT | + |
| exon-exon | RO60 | 1 | - | MBIP | 14 | + |
| exon-exon | TPM1 | 15 | - | TPM1 | 15 | + |
| exon-exon | OIP5-AS1 | 15 | - | OIP5-AS1 | 15 | + |
| exon-exon | NFRKB | 11 | + | NFRKB | 11 | - |
| exon-intron | AKAP12 | 6 | - | MED12 | X | + |
| exon-exon | HLA-B | 6 | + | RNA45SN1 | 21 | + |
| exon-intron | USP15 | 12 | - | HEATR5B | 2 | - |
| intron-exon | RNA28SP | 21 | + | ANXA2 | 15 | - |
| exon-exon | RNA45SN2 | 21 | - | DSC3 | 18 | - |
| exon-exon | HIVEP1 | 6 | - | SUCO | 1 | - |
| exon-exon | LOC100506403 | 21 | - | ND5 | MT | - |
| exon-exon | PURB | 7 | + | PURB | 7 | - |
| exon-intron | IPO7 | 11 | - | DENND2B | 11 | - |
| exon-exon | APOL6 | 22 | + | CDH1 | 16 | + |
| exon-exon | PI4KA | 22 | + | GBP3 | 1 | - |
| exon-intron | LOC105377929 | 6 | - | C11orf80 | 11 | - |
| exon-intron | ZNF667 | 19 | + | NHS | X | - |
| exon-intron | IGLC2 | 22 | + | IGL | 22 | + |
| exon-intron | LOC107985697 | Y | - | RBPMS | 8 | + |
| intron-exon | CTIF | 18 | - | TIMP2 | 17 | + |
| intron-exon | RNR1 | MT | + | DSTN | 20 | - |
| exon-exon | RAB3D | 19 | - | AHNAK | 11 | + |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN3 | 21 | - |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN3 | 21 | - |
| intron-exon | KIF26B | 1 | - | TRNAU1AP | 1 | + |
| intron-exon | RNA18SP5 | 21 | - | RNA45SN3 | 21 | - |
| intron-exon | UBE3C | 7 | + | SEPTIN11 | 4 | + |
| intron-exon | LOC105371312 | 1 | + | TCF20 | 22 | - |
| exon-intron | APOOL | X | - | MTA3 | 2 | - |
| exon-exon | CALD1 | 7 | - | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN1 | 21 | + |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | SRRM2 | 16 | - | NUFIP2 | 17 | + |
| exon-exon | FYB1 | 5 | - | MAP4 | 3 | - |
| exon-intron | LOC107986440 | 5 | + | CTBP2 | 10 | + |
| exon-intron | STX17 | 9 | + | ERP44 | 9 | + |
| exon-exon | PPM1K | 4 | - | PLAC8 | | - |
| exon-exon | RNA45SN2 | 21 | + | ABCD4 | 14 | - |
| exon-exon | PTMA | 2 | - | ZNF236 | 18 | - |
| exon-exon | NISCH | 3 | - | NISCH | 3 | + |
| intron-exon | AL445363.2 | 14 | - | LOC105370449 | 14 | - |
| exon-exon | RPL10P16 | 19 | + | MFAP4 | 17 | + |
| exon-intron | LOC107985465 | 1 | - | AL161640.1 | 1 | - |
| exon-intron | LRRK1 | 15 | + | LOC105371026 | 15 | - |
| exon-exon | CALR | 19 | - | NELFB | 9 | - |
| exon-intron | DNM1 | 9 | - | RNA28SP | 21 | - |
| intron-exon | MRAP | 21 | + | SMC2 | 9 | - |
| exon-exon | B2M | 15 | - | RRBP1 | 20 | - |
| intron-exon | GAGE12B | X | - | IFNAR1 | 21 | - |
| intron-exon | GALK2 | 15 | + | ANKRD13A | 12 | + |
| intron-exon | BTK | X | - | CYB561D1 | 1 | + |
| exon-exon | AREL1 | 14 | + | AREL1 | 14 | - |
| exon-intron | PRSS2 | 7 | - | CNOT2 | 12 | - |
| exon-intron | NAXE | 1 | - | ABLIM2 | 4 | - |
| exon-intron | LINC02646 | 10 | + | LINC02646 | 10 | - |
| exon-intron | GRHL2 | 8 | + | PIK3R3 | 1 | + |
| intron-exon | PRIMPOL | 4 | + | SRSF11 | 1 | + |
| exon-intron | ATP6 | MT | - | ATG7 | 3 | - |
| exon-intron | STXBP2 | 19 | - | NELFB | 9 | + |
| exon-exon | LINC01572 | 16 | + | LINC01572 | 16 | - |
| exon-intron | EXOC7 | 17 | - | GBA2 | 9 | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN1 | 21 | - |
| exon-intron | SRP19 | 5 | - | LOC107985706 | Y | - |
| intron-exon | LEO1 | 15 | - | NUCKS1 | 1 | - |
| intron-exon | PRMT5-AS1 | 14 | + | PRMT5 | 14 | - |
| exon-exon | PRMT5 | 14 | + | PRMT5 | 14 | - |
| exon-intron | RPL3P4 | 14 | + | FGGY | 1 | - |
| exon-exon | GDAP2 | 1 | - | GDAP2 | 1 | + |
| exon-intron | LGALS17A | 19 | + | AC005515.1 | 19 | + |
| exon-intron | COX1 | MT | - | OSBP2 | 22 | + |
| exon-intron | EPB41L3 | 18 | + | NFAT5 | 16 | - |
| intron-exon | DUBR | 3 | - | UGDH | 4 | + |
| exon-exon | COX3 | MT | + | DNAJC2 | 7 | + |
| intron-exon | KATNAL1 | 13 | - | LOC105379383 | 8 | - |
| exon-exon | TMEM9 | 1 | - | KIAA1522 | 1 | + |
| exon-exon | RNA45SN2 | 21 | + | IK | 5 | + |
| exon-exon | UCHL5 | 1 | + | TARS3 | 15 | - |
| exon-intron | NFIC | 19 | - | FAM83H-AS1 | 8 | + |
| exon-exon | RNA45SN1 | 21 | - | RNA45SN1 | 21 | + |
| exon-intron | TOX3 | 16 | + | LRP6 | 12 | + |
| exon-intron | LOC105371770 | 17 | + | SNHG12 | 1 | - |
| exon-intron | THOC5 | 22 | - | ERGIC3 | 20 | + |
| exon-exon | ND4 | MT | + | ZC2HC1C | 14 | + |
| exon-intron | CLINT1 | 5 | + | H2AC6 | 6 | + |
| exon-exon | SLC44A2 | 19 | + | VCL | 10 | - |
| exon-intron | PEX11B | 1 | + | KAZN | 1 | + |
| intron-exon | SNED1 | 2 | + | UBXN2B | 8 | + |
| exon-exon | TMOD3 | 15 | - | ATP6 | MT | - |
| intron-exon | JMJD1C | 10 | + | PROSER3 | 19 | + |
| intron-exon | CUEDC2 | 10 | + | STON2 | 14 | + |
| intron-exon | FAM117A | 17 | - | STON2 | 14 | + |
| exon-intron | CRYL1 | 13 | - | ATRNL1 | 10 | + |
| intron-exon | RNR2 | MT | + | ND1 | MT | + |
| intron-exon | SNX29 | 16 | - | NFATC3 | 16 | + |
| exon-exon | BUB3 | 10 | - | BUB3 | 10 | + |
| intron-exon | GOLGA4 | 3 | - | COX1 | MT | + |
| exon-exon | ND4 | MT | - | TFDP1 | 13 | + |
| exon-exon | UBA52 | 19 | - | TM4SF1 | 3 | - |
| intron-exon | TRAK1 | 3 | + | ALDOC | 17 | - |
| exon-intron | ND4L | MT | + | ND4 | MT | + |
| exon-exon | ND4 | MT | - | ND4L | MT | - |
| intron-exon | LYRM1 | 16 | + | EP300 | 22 | + |
| exon-intron | COPZ1 | 12 | - | UEVLD | 11 | + |
| exon-intron | LRRC15 | 3 | - | ZBTB38 | 3 | + |
| exon-intron | CTSB | 8 | + | GPRC5D-AS1 | 12 | + |
| intron-exon | RNR1 | MT | + | UVRAG | 11 | + |
| intron-exon | LOC102723789 | 6 | + | RPL23 | 17 | + |
| intron-exon | LOC102723789 | 6 | + | RPL23 | 17 | + |
| intron-exon | CLEC16A | 16 | - | NCL | 2 | + |
| exon-exon | HNRNPK | 9 | + | HNRNPK | 9 | - |
| exon-exon | ND4 | MT | - | COX1 | MT | - |
| exon-exon | HSP90B1 | 12 | + | SARS1 | 1 | + |
| intron-exon | MTND1P23 | 1 | + | ATP6 | MT | + |
| intron-exon | NUP210 | 3 | + | FBXO4 | 5 | + |
| exon-exon | RNA45SN1 | 21 | - | RNA45SN2 | 21 | + |
| exon-intron | ND2 | MT | + | LINC02613 | 2 | - |
| exon-exon | TAGLN2 | 1 | - | LPP | 3 | - |
| exon-intron | ZNF816 | 19 | + | ZNF765-ZNF761 | 19 | + |
| exon-exon | FLNA | X | - | YBX1 | 1 | + |
| exon-exon | MFAP3L | 4 | + | MFAP3L | 4 | - |
| exon-exon | KCNK1 | 1 | + | KCNK1 | 1 | - |
| exon-exon | BRD2 | 6 | + | EIF2AK1 | 7 | - |
| exon-exon | CDC6 | 17 | - | GK5 | 3 | + |
| exon-exon | EED | 11 | - | EED | 11 | + |
| exon-exon | GGCX | 2 | - | GGCX | 2 | + |
| exon-exon | LOC107985405 | 20 | - | PIGT | 20 | + |
| exon-exon | LOC105372480 | 19 | - | ZNF8-ERVK3-1 | 19 | - |
| exon-exon | TRAK1 | 3 | - | ARF6 | 14 | - |
| exon-exon | CISH | 3 | - | CISH | 3 | + |
| exon-exon | RNA45SN1 | 21 | + | PYROXD2 | 10 | - |
| exon-exon | TAF4 | 20 | + | TAF4 | 20 | - |
| exon-intron | JPH2 | 20 | + | PCED1A | 20 | + |
| exon-exon | RNA45SN2 | 21 | + | RNA5S17 | 1 | - |
| exon-exon | FLNA | X | + | ALDOA | 16 | - |
| exon-exon | STMP1 | 7 | - | STMP1 | 7 | + |
| exon-exon | RPN2 | 20 | - | RPN2 | 20 | + |
| exon-exon | IMMT | 2 | - | CDH1 | 16 | + |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN1 | 21 | + |
| exon-exon | JUP | 17 | - | DDX41 | 5 | - |
| intron-exon | RNA28SP | 21 | - | RNA45SN2 | 21 | - |
| exon-exon | AHCY | 20 | - | AHCY | 20 | + |
| exon-exon | COX2 | MT | - | COX2 | MT | + |
| exon-exon | EIF4A1P10 | X | - | SENP3-EIF4A1 | 17 | - |
| exon-exon | COX3 | MT | - | COX3 | MT | + |
| exon-exon | RNA45SN1 | 21 | - | RNA45SN1 | 21 | + |
| intron-exon | LOC105373194 | X | - | CERS2 | 1 | + |
| exon-exon | ATP5F1B | 12 | - | ATP5F1B | 12 | + |
| exon-exon | CD276 | 15 | - | CD276 | 15 | + |
| exon-intron | RNA45SN2 | 21 | - | PDE3A | 12 | + |
| exon-exon | PDCD4 | 10 | - | UBE2N | 12 | + |
| exon-exon | LY6E | 8 | + | LY6E | 8 | - |
| exon-exon | KRT81 | 12 | - | RNA45SN3 | 21 | + |
| intron-exon | MAML2 | 11 | + | PSAP | 10 | + |
| exon-intron | TRIM50 | 7 | - | TRIM74 | 7 | - |
| exon-exon | TRIM16 | 17 | + | TRIM16 | 17 | - |
| exon-intron | DHX38 | 16 | + | LOC101927151 | 19 | - |
| exon-exon | ZHX3 | 20 | - | SRM | 1 | - |
| intron-exon | LOC101927151 | 19 | + | DHX38 | 16 | - |
| exon-intron | TMEM41B | 11 | + | MCAM | 11 | + |
| intron-exon | LOC101927151 | 19 | + | DHX38 | 16 | - |
| exon-intron | DHX38 | 16 | + | LOC101927151 | 19 | - |
| exon-intron | GGCX | 2 | - | R3HDM2 | 12 | + |
| exon-exon | RNA45SN1 | 21 | - | RNA45SN1 | 21 | + |
| intron-exon | C6orf62 | 6 | + | NEAT1 | 11 | - |
| exon-exon | GUF1 | 4 | + | RNA45SN1 | 21 | + |
| exon-intron | ND5 | MT | - | LOC100506514 | 4 | + |
| exon-intron | ATF7IP | 12 | - | ATP6V0E1 | 5 | - |
| exon-exon | HSPA8 | 11 | + | HSPA8 | 11 | - |
| exon-intron | CCND1 | 11 | + | ATP5MF-PTCD1 | 7 | - |
| exon-exon | TCIRG1 | 11 | + | EWSR1 | 22 | - |
| exon-intron | RNA45SN1 | 21 | - | RNA28SP | 21 | + |
| exon-exon | RNA45SN1 | 21 | - | RNA45SN1 | 21 | + |
| exon-exon | LOC112268284 | 21 | - | RNA45SN3 | 21 | + |
| intron-exon | RAD51B | 14 | - | RNA45SN3 | 21 | + |
| exon-exon | CCT5 | 5 | - | CCT5 | 5 | + |
| exon-exon | DIDO1 | 20 | - | BSPRY | 9 | + |
| intron-exon | RNA28SP | 21 | + | RNA45SN1 | 21 | + |
| exon-exon | RNA45SN3 | 21 | - | RNA45SN2 | 21 | + |
| exon-exon | RNA45SN3 | 21 | - | RNA45SN1 | 21 | + |
| exon-exon | BCAP31 | X | + | BCAP31 | X | - |
| exon-exon | DCBLD2 | 3 | - | TLR1 | 4 | - |
| exon-exon | ANKRD27 | 19 | + | ANKRD27 | 19 | - |
| exon-exon | IQCH-AS1 | 15 | - | IQCH | 15 | + |
| exon-exon | ANKRD27 | 19 | + | ANKRD27 | 19 | - |
| exon-exon | MALAT1 | 11 | + | TMBIM6 | 12 | - |
| exon-exon | DZIP3 | 3 | - | PLK2 | 5 | + |
| exon-exon | NDUFS2 | 1 | - | GTF2H2C | 5 | - |
| exon-intron | STEAP4 | 7 | + | SAP30BP | 17 | - |
| exon-exon | PIK3R1 | 5 | - | PIK3R1 | 5 | + |
| exon-intron | CFLAR | 2 | - | AP1S2 | X | + |
| exon-exon | RNA45SN2 | 21 | - | LARGE1 | 22 | + |
| intron-exon | LOC112268284 | 21 | - | RNA45SN3 | 21 | + |
| exon-intron | NSD2 | 4 | - | SNHG14 | 15 | + |
| exon-intron | CST3 | 20 | + | PDCD6IP | 3 | - |
| intron-exon | ND5 | MT | - | ARID4B | 1 | + |
| exon-exon | RAB6A | 11 | + | ATP5F1B | 12 | + |
| exon-exon | PTGES3 | 12 | + | PTGES3 | 12 | - |
| intron-exon | MAGI3 | 1 | - | BPNT2 | 8 | + |
| exon-exon | SOX9-AS1 | 17 | - | APLP2 | 11 | + |
| exon-exon | UTP4 | 16 | - | LOC100507516 | 8 | - |
| intron-exon | RP11-120D5.1 | X | + | TUBB4B | 9 | + |
| intron-exon | LOC100505736 | 2 | - | BLOC1S5-TXNDC5 | 6 | - |
| exon-exon | BRPF1 | 3 | + | AP3M1 | 10 | + |
| intron-exon | HEATR1 | 1 | - | WAC | 10 | - |
| intron-exon | PDE10A | 6 | - | SOGA1 | 20 | - |
| exon-exon | STAT5B | 17 | + | CPNE3 | 8 | - |
| intron-exon | PTPN14 | 1 | - | TAF1 | X | - |
| intron-exon | NAV2 | 11 | + | CBX5 | 12 | + |
| exon-intron | CENPE | 4 | + | EVL | 14 | - |
| exon-exon | RAB5C | 17 | + | RAB5C | 17 | - |
| exon-exon | CYB5B | 16 | - | CYB5B | 16 | + |
| exon-exon | ATP2A2 | 12 | + | LONRF3 | X | + |
| exon-intron | RNA45SN1 | 21 | - | RNR1 | MT | + |
| intron-exon | RNA28SP | 21 | - | LOC112268284 | 21 | - |
| exon-exon | JAK1 | 1 | - | JAK1 | 1 | + |
| exon-exon | POM121 | 7 | - | POM121 | 7 | + |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN3 | 21 | - |
| exon-exon | PIGR | 1 | + | LAT | 16 | - |
| exon-intron | KLF12 | 13 | - | RNR2 | MT | - |
| exon-intron | TFRC | 3 | - | CEP128 | 14 | + |
| exon-exon | RNA45SN3 | 21 | + | RPS3AP6 | 15 | + |
| exon-intron | OSER1 | 20 | - | PDCD11 | 10 | - |
| exon-intron | SMS | X | + | CMTM8 | 3 | + |
| intron-exon | ARHGEF7 | 13 | - | PAPOLA | 14 | + |
| exon-exon | RNA45SN2 | 21 | - | RNA45SN1 | 21 | + |
| intron-exon | PVT1 | 8 | + | RNA45SN3 | 21 | + |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN1 | 21 | + |
| exon-intron | RNA45SN2 | 21 | + | RNA28SP | 21 | + |
| exon-intron | ATP8 | MT | - | MTATP6P1 | 1 | - |
| intron-exon | USP35 | 11 | + | GAB2 | 11 | - |
| intron-exon | RNA18SP5 | 21 | - | RNA45SN3 | 21 | + |
| exon-exon | TARS2 | 1 | - | RNA45SN2 | 21 | - |
| intron-exon | HDAC11 | 3 | + | RNA45SN1 | 21 | + |
| exon-exon | MLX | 17 | - | MLX | 17 | + |
| exon-intron | RNA45SN2 | 21 | + | RNA18SP5 | 21 | + |
| exon-exon | HHIPL2 | 1 | + | NR1H2 | 19 | - |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | CARD8 | 19 | - | CARD8 | 19 | + |
| exon-exon | THSD1 | 13 | - | LARS1 | 5 | - |
| intron-exon | LOC105374811 | 2 | - | HSP90AA1 | 14 | + |
| exon-exon | LOC100507053 | 4 | + | LOC100507053 | 4 | - |
| exon-intron | LOC100129540 | 15 | + | RASGRF1 | 15 | + |
| intron-exon | RNA18SP5 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | COX2 | MT | + | PCM1 | 8 | - |
| exon-intron | C11orf58 | 11 | + | AGBL4 | 1 | - |
| intron-exon | MYH16 | 7 | + | AOPEP | 9 | - |
| exon-exon | EIF4G2 | 11 | + | EIF4G2 | 11 | - |
| exon-exon | HECTD1 | 14 | + | EIF4G2 | 11 | + |
| exon-exon | NBAS | 2 | + | EIF4G2 | 11 | + |
| exon-intron | RNA45SN1 | 21 | - | LOC112268284 | 21 | - |
| exon-exon | MOAP1 | 14 | + | TMEM177 | 2 | + |
| exon-exon | MALAT1 | 11 | + | TALAM1 | 11 | - |
| exon-exon | RNA45SN1 | 21 | - | RNA45SN1 | 21 | + |
| exon-exon | NHEJ1 | 2 | - | CNPPD1 | 2 | - |
| exon-exon | TALAM1 | 11 | - | MGAT4B | 5 | + |
| exon-exon | C12orf49 | 12 | - | ND2 | MT | - |
| exon-exon | C12orf49 | 12 | - | ND2 | MT | - |
| exon-exon | RHBDD2 | 7 | + | JUP | 17 | - |
| exon-exon | SF3B2 | 11 | - | PRCC | 1 | - |
| exon-exon | RNASE4 | 14 | - | ACTG1 | 17 | - |
| exon-exon | FIBIN | 11 | + | HNRNPA1P41 | 9 | - |
| exon-exon | TMBIM6 | 12 | - | TMBIM6 | 12 | + |
| intron-exon | ARHGAP35 | 19 | + | HSD17B4 | 5 | - |
| exon-intron | MARK2 | 11 | - | MARK2 | 11 | + |
| intron-exon | TIMM23 | 10 | - | FTSJ3 | 17 | - |
| exon-exon | PKP4 | 2 | + | PSEN1 | 14 | + |
| exon-exon | ND4 | MT | - | COTL1 | 16 | - |
| exon-exon | COX3 | MT | - | CLPTM1L | 5 | - |
| intron-exon | NIBAN2 | 9 | - | EIF3H | 8 | - |
| exon-exon | ND4 | MT | - | COX3 | MT | - |
| exon-intron | CD109 | 6 | - | CELF1 | 11 | - |
| exon-exon | TMEM167A | 5 | + | ZNF37A | 10 | + |
| intron-exon | EZR | 6 | + | IFT43 | 14 | + |
| exon-exon | ND5 | MT | - | ND6 | MT | - |
| intron-exon | SLC30A7 | 1 | + | DPH5 | 1 | - |
| exon-intron | LOC105378179 | 14 | + | CLSTN3 | 12 | + |
| exon-intron | SH3BP4 | 2 | - | ZNF865 | 19 | + |
| intron-exon | LOC105371770 | 17 | - | LOC105371770 | 17 | + |
| exon-intron | TRIM28 | 19 | + | LOC105371131 | 16 | - |
| exon-exon | EIF4EBP2 | 10 | - | GSTM1 | 1 | - |
| exon-exon | CDYL | 6 | + | APP | 21 | - |
| intron-exon | LOC101928556 | 16 | + | TMED4 | 7 | + |
| intron-exon | SORCS3 | 10 | - | KIAA1217 | 10 | + |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN1 | 21 | - |
| exon-intron | LOC112268284 | 21 | - | RNA18SP5 | 21 | - |
| intron-exon | MTATP6P1 | 1 | - | ATP6 | MT | - |
| exon-exon | ATIC | 2 | - | ATP6 | MT | + |
| exon-exon | ACTG1 | 17 | - | MYB | 6 | - |
| exon-exon | HSPA5 | 9 | + | INTS6 | 13 | - |
| exon-exon | SPAG5 | 17 | + | SPAG5 | 17 | - |
| intron-exon | ITPR2 | 12 | - | RNA45SN1 | 21 | - |
| exon-exon | PPIH | 1 | + | COX3 | MT | - |
| exon-exon | MAD2L2 | 1 | - | ND4 | MT | + |
| exon-intron | CAPN2 | 1 | - | ZNF32-AS3 | 10 | + |
| exon-exon | LGALS3BP | 17 | + | LGALS3BP | 17 | - |
| exon-exon | CYTB | MT | - | DDX21 | 10 | + |
| exon-intron | DRAM2 | 1 | - | RNR2 | MT | + |
| exon-exon | RNA45SN2 | 21 | + | LHFPL2 | 5 | + |
| exon-exon | RNA45SN2 | 21 | - | RNA45SN1 | 21 | + |
| exon-intron | CSNK1G3 | 5 | + | EDA | X | + |
| exon-intron | YWHAZ | 8 | + | KCNH7 | 2 | - |
| exon-intron | THBS1 | 15 | + | PALM2AKAP2 | 9 | + |
| exon-exon | ARL5B | 10 | - | ARL5B | 10 | + |
| exon-intron | RNA45SN1 | 21 | - | RNR1 | MT | - |
| exon-exon | RNA45SN1 | 21 | - | RNA45SN3 | 21 | - |
| exon-exon | RNA45SN1 | 21 | - | RNA45SN3 | 21 | - |
| exon-exon | RNA45SN2 | 21 | + | EEF1A1 | 6 | - |
| exon-exon | CALR | 19 | + | COX1 | MT | + |
| exon-exon | GALNT10 | 5 | + | LOC101927378 | 7 | + |
| exon-exon | LHFPL6 | 13 | - | REEP4 | 8 | - |
| exon-exon | PFN1P1 | | + | PFN1 | 17 | + |
| exon-exon | TARDBP | 1 | - | NAA50 | 3 | + |
| exon-exon | YBX3 | 12 | - | PSMB1 | 6 | + |
| exon-exon | S100A2 | 1 | + | EIF3D | 22 | + |
| intron-exon | LOC102723729 | 8 | - | GINS4 | 8 | + |
| intron-exon | IGH | 14 | + | IGHA1 | 14 | + |
| exon-intron | EIF3CL | 16 | - | CCDC57 | 17 | - |
| exon-exon | RAB6A | 11 | - | RAB6A | 11 | + |
| exon-exon | EZR | 6 | - | CYB5R1 | 1 | - |
| exon-exon | ASCC2 | 22 | + | EZR | 6 | + |
| exon-intron | LAMB3 | 1 | + | TBL1X | X | - |
| exon-exon | GNB1 | 1 | - | ELF3 | 1 | + |
| exon-exon | MICAL3 | 22 | - | MICAL3 | 22 | + |
| exon-intron | ZNF74 | 22 | + | ANKRD17 | 4 | - |
| exon-intron | TMEM167B | 1 | - | NCAPD2 | 12 | + |
| intron-exon | FAR2 | 12 | + | ATP6 | MT | + |
| intron-exon | PMS2P9 | 7 | + | EMC10 | 19 | - |
| exon-intron | GIGYF2 | 2 | - | URGCP | 7 | - |
| exon-intron | LAMA3 | 18 | + | MET | 7 | - |
| exon-exon | BLOC1S5-TXNDC5 | 6 | + | BLOC1S5-TXNDC5 | 6 | - |
| exon-intron | HGSNAT | 8 | + | NDUFA10 | 2 | - |
| intron-exon | SCAPER | 15 | + | ZNF10 | 12 | - |
| exon-intron | CILK1 | 6 | + | LOC101928626 | 1 | - |
| exon-intron | NPIPB4 | 16 | - | NPIPB3 | 16 | - |
| intron-exon | LRIG3 | 12 | + | RAP2A | 13 | + |
| intron-exon | FUS | 16 | + | HELLS | 10 | + |
| intron-exon | CASC15 | 6 | + | ATP6 | MT | - |
| intron-exon | PAQR8 | 6 | + | CAV1 | 7 | + |
| intron-exon | LZTS2 | 10 | - | ANTXR1 | 2 | - |
| exon-intron | GSS | 20 | + | PIP4P1 | 14 | + |
| exon-exon | CDKN1B | 12 | + | GJA1 | 6 | - |
| exon-intron | GANAB | 11 | + | CLSTN1 | 1 | + |
| exon-exon | PTPN18 | 2 | + | TUBA1B | 12 | - |
| exon-exon | LOC112268015 | 8 | + | LOC112268015 | 8 | - |
| intron-exon | LARP1 | 5 | - | CELF4 | 18 | + |
| exon-intron | MFSD8 | 4 | + | MPDZ | 9 | - |
| intron-exon | FAM222B | 17 | + | POLDIP2 | 17 | - |
| exon-intron | TJAP1 | 6 | - | CAPN1 | 11 | - |
| exon-exon | ITGAM | 16 | - | ITGAM | 16 | + |
| exon-exon | RPSAP26 | 2 | + | SPSB1 | 1 | + |
| intron-exon | EFHD1 | 2 | + | LEF1 | 4 | + |
| exon-exon | IGFBP5 | 2 | + | MALAT1 | 11 | + |
| exon-exon | KRT6A | 12 | - | KRT6B | 12 | + |
| intron-exon | AC021752.1 | 15 | - | GRHL1 | 2 | + |
| exon-exon | ATP6 | MT | - | CAPZA1 | 1 | + |
| exon-exon | MYD88 | 3 | + | INO80B-WBP1 | 2 | + |
| exon-intron | CECR2 | 22 | - | ZFAND3 | 6 | + |
| exon-exon | CDH11 | 16 | + | CDH11 | 16 | - |
| exon-exon | ZNF335 | 20 | + | MYO1F | 19 | - |
| exon-intron | SF3B3 | 16 | - | COG4 | 16 | - |
| exon-intron | ATP6 | MT | - | DCUN1D1 | 3 | - |
| exon-intron | SLC44A3-AS1 | 1 | - | LOC105378861 | 1 | - |
| exon-exon | MTPN | 7 | + | LUZP6 | 7 | + |
| exon-exon | PPP1CC | 12 | - | HVCN1 | 12 | - |
| exon-intron | FAM222B | 17 | + | ERAL1 | 17 | + |
| exon-intron | CYTB | MT | - | TBC1D22A | 22 | + |
| intron-exon | RHOBTB1 | 10 | + | PTBP3 | 9 | - |
| exon-intron | FCSK | 16 | - | PARD3 | 10 | - |
| intron-exon | ZNF91 | 19 | - | SORD | 15 | - |
| exon-intron | SRSF11 | 1 | - | MFSD14C | 9 | - |
| exon-exon | TCEAL9 | X | - | TCEAL9 | X | + |
| intron-exon | KDELR2 | 7 | + | NOP58 | 2 | + |
| exon-exon | SETP20 | 4 | + | NAP1L1 | 12 | + |
| exon-intron | SCYL2 | 12 | + | HOXD10 | 2 | - |
| exon-intron | ND4 | MT | - | KLHDC4 | 16 | - |
| exon-intron | NEAT1 | 11 | - | TET3 | 2 | + |
| exon-intron | LGR4 | 11 | + | KLHDC1 | 14 | - |
| exon-intron | PAX9 | 14 | - | LOC100288798 | 12 | + |
| exon-intron | USP34 | 2 | + | HSDL2 | 9 | - |
| exon-intron | SMAD2 | 18 | + | RBM15 | 1 | - |
| exon-exon | UBXN7 | 3 | - | IRF6 | 1 | + |
| intron-exon | FNDC3B | 3 | + | HSPA5 | 9 | + |
| exon-intron | CFAP97 | 4 | - | CACNA2D3 | 3 | - |
| intron-exon | IP6K1 | 3 | - | CARD6 | 5 | - |
| exon-exon | ATP8 | MT | - | ANXA5 | 4 | - |
| exon-exon | SRRM2 | 16 | + | IGHG4 | 14 | - |
| exon-exon | BRD7 | 16 | - | ADCY7 | 16 | - |
| exon-intron | UBAP2L | 1 | - | MTATP6P1 | 1 | - |
| intron-exon | MMP28 | 17 | + | TFG | 3 | - |
| exon-intron | C1orf131 | 1 | - | CALN1 | 7 | - |
| exon-intron | PPM1G | 2 | + | FOXO3 | 6 | + |
| intron-exon | MBNL1 | 3 | - | AKAP13 | 15 | + |
| exon-intron | C2CD3 | 11 | - | P3H2 | 3 | - |
| intron-exon | COA1 | 7 | - | GPBP1 | 5 | + |
| intron-exon | MTND1P23 | 1 | + | ND1 | MT | + |
| exon-intron | SOX7 | 8 | + | ITGA3 | 17 | - |
| intron-exon | POC1B-AS1 | 12 | + | CAPN3 | 15 | - |
| exon-exon | PIP4P1 | 14 | + | MAPRE1 | 20 | - |
| intron-exon | PSMB1 | 6 | - | YTHDF3 | 8 | - |
| exon-intron | ADAT2 | 6 | + | MED13L | 12 | - |
| exon-intron | SOD2 | 6 | + | HSPA4 | 5 | + |
| exon-exon | TGFBR1 | 9 | - | CANX | 5 | + |
| exon-exon | PRPF38B | 1 | - | LMBRD1 | 6 | + |
| exon-exon | POM121 | 7 | + | GIGYF1 | 7 | + |
| intron-exon | NAA20 | 20 | - | ND4 | MT | + |
| exon-exon | CDC42SE1 | 1 | - | KRAS | 12 | - |
| exon-exon | DCUN1D4 | 4 | + | EML4 | 2 | + |
| exon-exon | HOOK2 | 19 | + | HNRNPUL1 | 19 | + |
| exon-intron | GCSAM | 3 | - | TTC19 | 17 | + |
| exon-intron | ANAPC16 | 10 | - | RP11-114G22.1 | 12 | - |
| exon-exon | ND1 | MT | + | ND5 | MT | + |
| exon-intron | RBM48 | 7 | - | DLG1 | 3 | + |
| exon-exon | CYP2S1 | 19 | - | VPS50 | 7 | - |
| intron-exon | MTCO2P12 | 1 | - | COX2 | MT | - |
| exon-intron | DVL3 | 3 | - | ABCC5 | 3 | - |
| exon-intron | PLBD2 | 12 | - | YWHAE | 17 | - |
| intron-exon | LOC105376017 | 9 | - | DDX58 | 9 | - |
| exon-exon | GRTP1 | 13 | - | LAMP1 | 13 | - |
| exon-intron | SERPINB13 | 18 | + | GNB4 | 3 | - |
| exon-intron | RECK | 9 | + | SH3GL1 | 19 | - |
| intron-exon | LOC105371814 | 17 | - | ATP5MC1 | 17 | + |
| exon-intron | UXS1 | 2 | + | PCBP2 | 12 | + |
| exon-exon | PRRC2C | 1 | + | PRRC2C | 1 | - |
| intron-exon | RUFY2 | 10 | - | YBX1 | 1 | + |
| exon-exon | HSP90B1 | 12 | + | HSP90B1 | 12 | - |
| exon-intron | FN1 | 2 | - | PDE3A | 12 | - |
| intron-exon | RNA18SP5 | 21 | + | FN1 | 2 | + |
| exon-exon | ND4 | MT | - | ND4L | MT | - |
| exon-intron | CD99P1 | Y | + | MACF1 | 1 | + |
| exon-exon | TIPRL | 1 | - | CCL22 | 16 | + |
| intron-exon | SCAPER | 15 | + | SBDS | 7 | + |
| exon-intron | ND4 | MT | - | MEGF9 | 9 | + |
| exon-intron | MAPK8IP1P2 | 17 | + | KANSL1 | 17 | + |
| intron-exon | NR2F1-AS1 | 5 | - | ITPR3 | 6 | + |
| intron-exon | UBE2E2 | 3 | + | RPL15 | 3 | + |
| exon-exon | RGL2 | 6 | + | RGL2 | 6 | - |
| intron-exon | MAPKAP1 | 9 | + | KCTD10 | 12 | + |
| exon-exon | KANSL3 | 2 | - | KANSL3 | 2 | + |
| exon-exon | IMMT | 2 | - | IMMT | 2 | + |
| exon-exon | PQBP1 | X | - | PQBP1 | X | + |
| exon-intron | RASSF5 | 1 | + | EIF2D | 1 | - |
| exon-exon | MTA1 | 14 | + | MTA1 | 14 | - |
| exon-exon | GNAS | 20 | - | ND5 | MT | + |
| exon-exon | STAG2 | X | - | ZNF714 | 19 | + |
| exon-intron | ATP6 | MT | + | SUPT6H | 17 | + |
| intron-exon | ND5 | MT | + | YWHAZ | 8 | - |
| intron-exon | ZNF721 | 4 | + | ATP6 | MT | - |
| intron-exon | TVP23B | 17 | - | ND6 | MT | - |
| exon-exon | ATP6 | MT | + | HSP90B1 | 12 | + |
| intron-exon | NRSN2-AS1 | 20 | + | LOC101929937 | 20 | - |
| exon-exon | THUMPD3 | 3 | + | THUMPD3 | 3 | - |
| intron-exon | TRPC4AP | 20 | - | PRRC2C | 1 | + |
| exon-exon | COL6A3 | 2 | + | POSTN | 13 | - |
| exon-intron | IPO9 | 1 | + | LOC107984215 | 10 | - |
| intron-exon | COA1 | 7 | + | FAM222B | 17 | - |
| intron-exon | EPS15 | 1 | + | FOXN3 | 14 | + |
| exon-exon | DHX9 | 1 | - | TMEM167A | 5 | - |
| exon-intron | EEF1B2 | 2 | - | HELZ | 17 | - |
| exon-intron | MYD88 | 3 | - | ARHGEF10L | 1 | - |
| exon-exon | NONO | X | - | LMBR1 | 7 | - |
| exon-exon | ND4 | MT | - | MALAT1 | 11 | + |
| exon-exon | ATP6 | MT | - | ND1 | MT | - |
| exon-intron | ATP6 | MT | - | SUMF1 | 3 | - |
| exon-intron | ATP6 | MT | - | ZNF37A | 10 | + |
| exon-exon | CYTB | MT | + | ATP6 | MT | + |
| exon-intron | SERP1 | 3 | - | UNK | 17 | + |
| exon-exon | EXOC5 | 14 | + | CEP290 | 12 | - |
| intron-exon | ULK2 | 17 | + | ERRFI1 | 1 | - |
| intron-exon | WHAMMP1 | 15 | + | TSLP | 5 | - |
| exon-intron | ANKRD52 | 12 | - | KLHL15 | X | + |
| exon-intron | ATP6 | MT | - | PRDM1 | 6 | - |
| intron-exon | FLCN | 17 | + | DHX29 | 5 | - |
| exon-intron | IK | 5 | - | LOC105369743 | 12 | - |
| exon-exon | TCF4 | 18 | + | ZC3H6 | 2 | + |
| exon-exon | ND6 | MT | + | ND2 | MT | + |
| exon-intron | ATP6 | MT | - | ATP8 | MT | - |
| exon-intron | COX1 | MT | - | CBWD2 | 2 | + |
| exon-exon | COX3 | MT | - | TMEM63B | 6 | + |
| exon-intron | TGM2 | 20 | - | RNR2 | MT | + |
| exon-exon | ND2 | MT | - | ND1 | MT | - |
| exon-exon | NTMT1 | 9 | - | ND2 | MT | - |
| intron-exon | PTS | 11 | + | PCBP1 | 2 | + |
| exon-exon | MYL6 | 12 | + | ND4 | MT | + |
| exon-exon | COX1 | MT | - | MLPH | 2 | + |
| exon-exon | ATP6 | MT | - | ND5 | MT | - |
| exon-exon | COX3 | MT | + | COX1 | MT | + |
| intron-exon | VPS37A | 8 | - | SLC4A5 | 2 | - |
| exon-intron | ATAD3B | 1 | - | ATAD3C | 1 | - |
| exon-exon | NCL | 2 | - | ANKRD26 | 10 | - |
| exon-intron | ZFAND3 | 6 | - | BMPR1A | 10 | + |
| intron-exon | RALGPS2 | 1 | + | ANGPTL1 | 1 | - |
| exon-exon | ND4 | MT | - | ND4L | MT | - |
| exon-exon | SLC20A2 | 8 | - | SLC20A2 | 8 | + |
| exon-exon | ATP1B1 | 1 | - | ATP1B1 | 1 | + |
| exon-exon | CTSB | 8 | + | CTSB | 8 | - |
| exon-exon | PNISR | 6 | + | ATP6 | MT | + |
| exon-intron | ND2 | MT | - | MTND2P28 | 1 | + |
| intron-exon | MTCO1P12 | 1 | - | COX1 | MT | - |
| exon-intron | ND1 | MT | - | MTND1P23 | 1 | + |
| exon-exon | FGGY | 1 | + | ND5 | MT | - |
| exon-intron | SMAD4 | 18 | + | FYB2 | 1 | + |
| exon-intron | HNRNPA2B1 | 7 | - | CMTM8 | 3 | + |
| exon-exon | VAMP7 | X | + | ND5 | MT | - |
| exon-intron | EIF3A | 10 | + | CHCHD3 | 7 | + |
| exon-exon | RNA45SN2 | 21 | - | PSAP | 10 | + |
| intron-exon | ZNF880 | 19 | - | GNS | 12 | - |
| exon-intron | UBE2A | X | - | RNA18SP5 | 21 | - |
| exon-exon | SPEN | 1 | - | SPEN | 1 | + |
| exon-exon | GNPTAB | 12 | + | GNPTAB | 12 | - |
| exon-intron | PRDX4 | X | - | PRDX4 | X | + |
| exon-intron | ZNF587 | 19 | - | LOC105373893 | 2 | - |
| exon-exon | TCOF1 | 5 | + | DSP | 6 | + |
| intron-exon | CEP126 | 11 | + | COA1 | 7 | + |
| exon-exon | AMFR | 16 | + | COX1 | MT | - |
| exon-exon | APP | 21 | + | SLC7A7 | 14 | + |
| exon-exon | PLAAT3 | 11 | - | PLAAT3 | 11 | + |
| exon-exon | RNF167 | 17 | + | IGFBP5 | 2 | - |
| exon-exon | SRPRA | 11 | - | FAM118B | 11 | + |
| intron-exon | SMIM41 | 12 | + | LOC112268096 | 12 | - |
| exon-exon | SF3B1 | 2 | + | SF3B1 | 2 | - |
| exon-intron | RPL14 | 3 | - | RNR2 | MT | + |
| exon-exon | ND2 | MT | + | ATP6 | MT | + |
| exon-exon | RNF144A | 2 | - | CCNJL | 5 | - |
| exon-exon | HUWE1 | X | + | HUWE1 | X | - |
| exon-intron | FAM104A | 17 | - | COG1 | 17 | + |
| exon-intron | ARRB2 | 17 | - | MTND2P28 | 1 | + |
| exon-exon | LOC441996 | 22 | + | ACO2 | 22 | + |
| exon-exon | SLC39A6 | 18 | + | SLC39A6 | 18 | - |
| exon-exon | ATP6 | MT | - | KRT7 | 12 | + |
| exon-exon | MAP2 | 2 | + | ATP1A1 | 1 | + |
| exon-exon | KLHL21 | 1 | + | KLHL21 | 1 | - |
| exon-exon | CBX5 | 12 | - | ANKFY1 | 17 | - |
| exon-exon | FUS | 16 | - | ND4 | MT | + |
| exon-exon | COX3 | MT | - | ND5 | MT | - |
| intron-exon | L2HGDH | 14 | - | LOC105378179 | 14 | - |
| exon-exon | ND2 | MT | - | PKM | 15 | - |
| exon-exon | TUBB | 6 | - | TMEM43 | 3 | - |
| exon-exon | COX1 | MT | - | COX1 | MT | + |
| exon-exon | HIF1AN | 10 | - | HIF1AN | 10 | + |
| exon-exon | MAPKAPK5 | 12 | - | MAPKAPK5 | 12 | + |
| exon-exon | MED4 | 13 | + | MED4-AS1 | 13 | + |
| exon-exon | OGT | X | - | CLEC1A | 12 | + |
| intron-exon | LOC731075 | 7 | - | GALNT11 | 7 | + |
| exon-intron | NPNT | 4 | + | TBCK | 4 | + |
| exon-intron | NBPF19 | 1 | + | LOC101927066 | 8 | - |
| intron-exon | PRPF8 | 17 | + | GNB5 | 15 | + |
| exon-exon | ACTB | 7 | - | RNA45SN2 | 21 | + |
| exon-intron | DLC1 | 8 | + | LOC112268260 | 1 | + |
| intron-exon | TPST1 | 7 | - | EEF1A1P22 | 15 | - |
| exon-exon | IGHG1 | 14 | - | UBXN1 | 11 | + |
| exon-exon | GNAS | 20 | - | GNAS | 20 | + |
| exon-exon | ND4 | MT | + | CYTB | MT | + |
| exon-exon | NCOA5 | 20 | + | COPZ1 | 12 | - |
| exon-intron | LUC7L | 16 | - | LOC102723930 | 16 | + |
| intron-exon | ZNF680 | 7 | - | ND1 | MT | + |
| exon-intron | PTMS | 12 | - | ATP8B1 | 18 | - |
| exon-exon | CTSB | 8 | - | ND4 | MT | - |
| exon-exon | ND2 | MT | - | PPP2CA | 5 | - |
| intron-exon | BPTF | 17 | + | CALM2 | 2 | - |
| exon-intron | MFN2 | 1 | + | KIAA0825 | 5 | - |
| exon-exon | ND5 | MT | - | ND6 | MT | - |
| exon-intron | SRSF8 | 11 | + | SNRPE | 1 | - |
| intron-exon | ATP23 | 12 | - | MYL12B | 18 | - |
| exon-intron | NEDD4L | 18 | - | PIP5K1A | 1 | + |
| exon-intron | SMNDC1 | 10 | - | MED13L | 12 | + |
| intron-exon | HERC1 | 15 | + | KITLG | 12 | - |
| intron-exon | RASA1 | 5 | - | MALAT1 | 11 | + |
| exon-intron | TES | 7 | - | MAPK14 | 6 | + |
| exon-intron | TPT1 | 13 | - | NCK1 | 3 | + |
| intron-exon | NFIB | 9 | + | SREK1 | 5 | + |
| exon-exon | ANKIB1 | 7 | - | ANKIB1 | 7 | + |
| exon-exon | ZNF584 | 19 | - | WDR93 | 15 | - |
| intron-exon | ZNF680 | 7 | + | CTNNB1 | 3 | + |
| exon-exon | PAGR1 | 16 | - | ETFDH | 4 | + |
| exon-exon | TACSTD2 | 1 | - | VOPP1 | 7 | + |
| intron-exon | APBB2 | 4 | + | RPL15 | 3 | + |
| exon-intron | MATR3 | 5 | - | THEM4 | 1 | - |
| intron-exon | MAP2K1 | 15 | - | DUSP6 | 12 | - |
| exon-exon | TAB2 | 6 | + | TM9SF3 | 10 | - |
| exon-exon | ASPH | 8 | - | NOC3L | 10 | - |
| intron-exon | SIK3 | 11 | - | ITM2A | X | + |
| exon-intron | SMAD5 | 5 | - | HGD | 3 | + |
| exon-exon | IVNS1ABP | 1 | - | GRSF1 | 4 | + |
| exon-exon | CALCOCO1 | 12 | - | MALAT1 | 11 | + |
| intron-exon | IGF1R | 15 | - | MALAT1 | 11 | + |
| exon-exon | PFKFB2 | 1 | - | DDHD1 | 14 | + |
| exon-exon | LIFR | 5 | + | AKIRIN1 | 1 | + |
| exon-intron | NARS1 | 18 | - | CD99P1 | X | + |
| exon-exon | ADSL | 22 | + | ADSL | 22 | - |
| intron-exon | RNR2 | MT | - | APP | 21 | + |
| exon-exon | ADSL | 22 | - | ADSL | 22 | + |
| exon-intron | MIGA1 | 1 | - | GPHN | 14 | - |
| exon-exon | CACNB4 | 2 | - | CLOCK | 4 | - |
| intron-exon | RGMB | 5 | - | CPD | 17 | - |
| exon-exon | LEMD3 | 12 | + | PPP6C | 9 | - |
| exon-intron | CLN5 | 13 | + | KCTD10 | 12 | + |
| intron-exon | NAV2 | 11 | + | ND4 | MT | - |
| intron-exon | DYRK1A | 21 | + | NUP133 | 1 | + |
| exon-exon | ABCC3 | 17 | - | CALR | 19 | - |
| exon-exon | OMA1 | 1 | - | LIMCH1 | 4 | + |
| exon-exon | ND2 | MT | - | ND2 | MT | + |
| intron-exon | LOC107985073 | 17 | + | LINC01483 | 17 | + |
| exon-intron | ATP6V0D1 | 16 | + | RNU6-6P | 10 | - |
| exon-exon | RPL41 | 12 | + | RPL41P4 | 14 | + |
| intron-exon | UBAP2 | 9 | + | LOC100128288 | 17 | - |
| exon-exon | ATP8 | MT | + | ATP6 | MT | + |
| exon-exon | SAP30BP | 17 | + | SAP30BP | 17 | - |
| intron-exon | DNM1P47 | 15 | + | CALR | 19 | - |
| intron-exon | TNRC6A | 16 | - | RPA1 | 17 | - |
| exon-exon | EIF3E | 8 | + | EIF3E | 8 | - |
| exon-exon | RNA45SN1 | 21 | - | SQSTM1 | 5 | - |
| exon-exon | RLF | 1 | - | KPNA6 | 1 | + |
| exon-exon | PSAP | 10 | + | PSAP | 10 | - |
| exon-exon | TSC22D1 | 13 | + | SARAF | 8 | - |
| exon-exon | ATP6 | MT | + | ND4 | MT | + |
| exon-exon | COPS5 | 8 | - | HNRNPH3 | 10 | + |
| intron-exon | BICRA | 19 | + | RPS4X | X | - |
| exon-exon | CS | 12 | + | ADGRE5 | 19 | + |
| intron-exon | MTATP6P1 | 1 | + | ATP6 | MT | - |
| exon-exon | HLA-DRA | 6 | + | PPIG | 2 | - |
| intron-exon | SLC22A1 | 6 | - | LAMP2 | X | + |
| exon-exon | ND4 | MT | - | ND2 | MT | - |
| exon-exon | SLC19A2 | 1 | + | EIF2S3B | 12 | + |
| exon-exon | ADAR | 1 | - | PLS3 | X | - |
| exon-exon | CYREN | 7 | - | KIF5B | 10 | - |
| exon-exon | NEAT1 | 11 | - | TXNL1 | 18 | - |
| exon-intron | EPCAM | 2 | - | HERC3 | 4 | - |
| exon-exon | KMT2E | 7 | + | SDC4 | 20 | - |
| exon-exon | ANKRD11 | 16 | + | EEF1A1P5 | 9 | - |
| intron-exon | WASF3 | 13 | + | TAF15 | 17 | + |
| exon-exon | NPTN | 15 | - | GOLM2 | 15 | - |
| exon-intron | NEAT1 | 11 | - | RHOQ | 2 | + |
| exon-intron | DSE | 6 | + | MSH3 | 5 | - |
| exon-exon | SGK1 | 6 | + | NUFIP2 | 17 | + |
| exon-exon | CELF1 | 11 | + | CELF1 | 11 | - |
| exon-exon | PIK3IP1 | 22 | + | PIK3IP1 | 22 | - |
| exon-intron | CTSB | 8 | - | MACROD2 | 20 | + |
| exon-exon | ND4 | MT | - | ND4 | MT | + |
| exon-exon | ND4 | MT | - | ND4 | MT | + |
| exon-intron | ND4 | MT | - | CLASP1 | 2 | + |
| exon-intron | AFF1-AS1 | 4 | - | C4orf36 | 4 | - |
| exon-exon | PEG10 | 7 | + | PEG10 | 7 | - |
| exon-intron | RAP2A | 13 | - | LOC105374772 | 2 | - |
| exon-exon | PEG10 | 7 | + | PEG10 | 7 | - |
| intron-exon | BSDC1 | 1 | - | ATP6 | MT | + |
| exon-exon | PDE4DIP | 1 | - | CDIP1 | 16 | - |
| exon-intron | PAX8 | 2 | + | NBPF15 | 1 | + |
| intron-exon | AC009088.1 | 16 | - | RAPGEF3 | 12 | + |
| intron-exon | RNR2 | MT | - | CTSC | 11 | + |
| intron-exon | CLIP4 | 2 | - | TM9SF1 | 14 | - |
| intron-exon | LOC102724843 | 21 | + | NFYC | 1 | - |
| intron-exon | ND3 | MT | + | ND2 | MT | + |
| exon-exon | ND4 | MT | - | ND4 | MT | + |
| exon-exon | ND4 | MT | - | ND4L | MT | - |
| exon-intron | MALAT1 | 11 | + | LRP1B | 2 | - |
| exon-exon | SYPL1 | 7 | - | SYPL1 | 7 | + |
| intron-exon | ARHGEF18 | 19 | + | CYTB | MT | - |
| intron-exon | ZMYM2 | 13 | - | XRCC5 | 2 | - |
| exon-exon | PSMB4 | 1 | - | IGFN1 | 1 | + |
| intron-exon | PABPC1L | 20 | + | MRPL39 | 21 | + |
| exon-exon | TP53BP1 | 15 | + | PDPR | 16 | + |
| exon-exon | IL6ST | 5 | + | IL6ST | 5 | - |
| exon-exon | ND1 | MT | + | NEAT1 | 11 | + |
| exon-exon | YIPF4 | 2 | + | YIPF4 | 2 | - |
| exon-intron | GAS2L3 | 12 | - | FAF1 | 1 | - |
| exon-intron | BMX | X | + | ACE2 | X | - |
| exon-intron | TYMS | 18 | + | SP140L | 2 | + |
| exon-exon | TALAM1 | 11 | - | NUP58 | 13 | - |
| exon-exon | ND5 | MT | - | COX2 | MT | - |
| exon-exon | ND5 | MT | + | SPART | 13 | + |
| exon-exon | SARAF | 8 | - | SARAF | 8 | + |
| exon-exon | ATP6 | MT | + | NORAD | 20 | + |
| exon-exon | SLC25A38 | 3 | + | HPRT1 | X | + |
| exon-exon | DDX47 | 12 | + | HSP90AA1 | 14 | - |
| exon-exon | TG | 8 | - | COX2 | MT | + |
| exon-exon | NOL8 | 9 | - | NOL8 | 9 | + |
| exon-exon | ZNF638 | 2 | + | ZNF638 | 2 | - |
| exon-intron | KPNA3 | 13 | - | LOC105375492 | 7 | - |
| intron-exon | RNR2 | MT | + | IRF8 | 16 | + |
| exon-exon | SAT1 | X | + | SAT1 | X | - |
| intron-exon | CASK | X | - | TGIF1 | 18 | - |
| exon-exon | CDR1 | X | - | CDR1 | X | + |
| exon-intron | SGPL1 | 10 | - | RASAL1 | 12 | - |
| exon-exon | SPRR2F | 1 | - | SPRR2B | 1 | - |
| exon-intron | RAP1GAP2 | 17 | - | CTTNBP2NL | 1 | + |
| intron-exon | MINK1 | 17 | - | SCNN1A | 12 | + |
| exon-exon | SPRR1B | 1 | - | ARL13B | 3 | - |
| exon-exon | SPRR1B | 1 | - | ARL13B | 3 | - |
| exon-exon | TOMM22 | 22 | - | TOMM22 | 22 | + |
| intron-exon | ANXA2 | 15 | + | SPRR2A | 1 | + |
| exon-exon | DUSP1 | 5 | + | GLI3 | 7 | + |
| exon-intron | ARHGAP23 | 17 | - | LOC105372442 | 19 | + |
| exon-exon | SPRR2D | 1 | + | CYTB | MT | + |
| exon-exon | RHBDF1 | 16 | + | SPRR2A | 1 | + |
| intron-exon | ASAP2 | 2 | - | MLIP | 6 | + |
| exon-exon | TMEM260 | 14 | - | TMEM260 | 14 | + |
| exon-exon | AMD1 | 6 | - | AMD1 | 6 | + |
| exon-intron | SPRR3 | 1 | - | ZDHHC13 | 11 | + |
| exon-exon | TMEM86A | 11 | + | LOC105376579 | 11 | + |
| exon-exon | TMEM86A | 11 | + | LOC105376579 | 11 | + |
| exon-intron | RNA45SN2 | 21 | + | NXN | 17 | + |
| exon-exon | KCNJ15 | 21 | - | KCNJ15 | 21 | + |
| exon-exon | KRT6A | 12 | - | KRT6B | 12 | - |
| exon-exon | PPIA | 7 | - | PPIAP22 | 21 | + |
| exon-exon | PAK2 | 3 | - | PAK2 | 3 | + |
| intron-exon | LOC101930100 | 21 | + | CDH3 | 16 | - |
| exon-exon | RNA45SN3 | 21 | - | LOC112268284 | 21 | - |
| exon-intron | ND1 | MT | + | PRELID2 | 5 | + |
| exon-intron | RNA45SN3 | 21 | - | GFOD1 | 6 | + |
| intron-exon | RAI1 | 17 | + | SQLE | 8 | + |
| intron-exon | THRB | 3 | + | ATP6 | MT | + |
| intron-exon | LOC112268284 | 21 | - | RNA45SN3 | 21 | - |
| intron-exon | RASGRP3 | 2 | - | SECTM1 | 17 | + |
| exon-exon | ND4 | MT | + | TALAM1 | 11 | - |
| exon-intron | COX2 | MT | + | LRRC8D | 1 | - |
| exon-intron | PACS2 | 14 | + | MAP3K12 | 12 | - |
| exon-intron | SDC1 | 2 | + | PROS1 | 3 | + |
| exon-intron | RNA45SN1 | 21 | + | NEDD4L | 18 | + |
| exon-exon | RNA45SN3 | 21 | + | SEPTIN9 | 17 | + |
| exon-exon | COX1 | MT | - | DYNLT3 | X | - |
| exon-intron | LCLAT1 | 2 | - | MLIP | 6 | + |
| exon-exon | MYH9 | 22 | - | EIF1 | 17 | - |
| exon-exon | TSPAN14 | 10 | - | RNA45SN3 | 21 | - |
| exon-exon | ND4 | MT | - | ND1 | MT | - |
| exon-exon | RNA45SN1 | 21 | + | TSPAN14 | 10 | + |
| exon-exon | ILF3 | 19 | - | EHBP1L1 | 11 | - |
| exon-exon | RPL37A | 2 | - | TRUB2 | 9 | - |
| exon-exon | RIPOR2 | 6 | + | PHGDH | 1 | - |
| exon-exon | CYTH2 | 19 | - | CYTH2 | 19 | + |
| exon-exon | LOC107986215 | 4 | - | RASGEF1B | 4 | - |
| exon-exon | VAMP2 | 17 | + | VAMP2 | 17 | - |
| exon-exon | MYO1D | 17 | + | LOC102724715 | 17 | + |
| exon-intron | SGPP2 | 2 | - | LOC107983998 | 19 | - |
| exon-exon | ARIH1 | 15 | - | EPB41L1 | 20 | + |
| exon-exon | IFFO1 | 12 | + | SOD3 | 4 | + |
| exon-exon | SDF2L1 | 22 | - | TMEM201 | 1 | - |
| exon-intron | PPP4R3B | 2 | + | AZIN1 | 8 | + |
| exon-exon | RAB37 | 17 | - | STAT3 | 17 | + |
| exon-exon | MICOS10-NBL1 | 1 | - | RBCK1 | 20 | - |
| exon-exon | F2R | 5 | - | SERINC3 | 20 | + |
| exon-exon | TCTA | 3 | - | TCTA | 3 | + |
| exon-intron | CALR | 19 | - | GSN | 9 | - |
| exon-intron | ZNF815P | 7 | - | AP000487.5 | 11 | + |
| exon-intron | LOC100128086 | 9 | + | AL807761.3 | 9 | + |
| intron-exon | MFSD13B | 16 | + | RRN3P3 | 16 | + |
| intron-exon | BID | 22 | + | SLC4A1AP | 2 | + |
| exon-intron | GALNT18 | 11 | + | DZIP3 | 3 | + |
| exon-exon | PCBP1 | 2 | - | SAR1A | 10 | - |
| intron-exon | AL592295.3 | 1 | - | RAP2A | 13 | + |
| intron-exon | MAN2B2 | 4 | + | SEPTIN3 | 22 | - |
| intron-exon | IGH | 14 | - | IGHV5-51 | 14 | - |
| exon-exon | N4BP2L1 | 13 | - | ZBTB18 | 1 | + |
| exon-intron | SNRPA | 19 | - | POM121C | 7 | + |
| intron-exon | LINC-PINT | 7 | - | SEC62 | 3 | + |
| intron-exon | IGH | 14 | - | IGHG3 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG3 | 14 | - |
| exon-exon | GPX1 | 3 | + | GPX1 | | - |
| exon-intron | S1PR1 | 1 | - | IGH | 14 | - |
| intron-exon | AC008764.1 | | - | CHERP | | - |
| exon-exon | RPS9P2 | 22 | + | XPNPEP3 | 22 | - |
| exon-exon | HEYL | 1 | - | ENTPD6 | 20 | + |
| exon-intron | RPS3A | 4 | + | JMY | 5 | - |
| intron-exon | RUFY2 | 10 | - | HNRNPH3 | 10 | - |
| exon-intron | RPS10P13 | | - | AMBRA1 | 11 | - |
| exon-exon | LOC107985103 | | + | MIR3659HG | | + |
| exon-exon | MYBL2 | 20 | - | MYBL2 | 20 | + |
| exon-exon | COASY | 17 | - | DTD1 | 20 | + |
| exon-exon | CRX | 19 | + | ND4 | MT | + |
| exon-intron | RPL23AP42 | 3 | - | LINC02067 | 3 | - |
| exon-intron | XRCC4 | 5 | + | LOC105379053 | | + |
| exon-exon | RPS4X | X | - | ND1 | MT | + |
| exon-exon | PRMT2 | 21 | + | GAPDH | 12 | + |
| intron-exon | SMARCA4 | 19 | - | SMARCA4 | 19 | + |
| exon-intron | TMEM160 | | - | C19orf44 | 19 | + |
| exon-intron | RPS11 | 19 | + | NUDC | 1 | - |
| exon-exon | HEXB | 5 | - | HEXB | 5 | + |
| exon-exon | VARS1 | 6 | + | VARS1 | 6 | - |
| intron-exon | HSPD1 | 2 | - | ATP8 | MT | + |
| exon-intron | USP2-AS1 | 11 | + | LOC105369520 | | + |
| exon-exon | EP400 | 12 | - | TIMM50 | 19 | + |
| exon-exon | INTS13 | 12 | - | INTS13 | 12 | + |
| exon-intron | NDUFS5 | 1 | + | LOC101927521 | | - |
| exon-exon | EIF3D | 22 | - | UCP2 | 11 | - |
| exon-intron | PPP2R5D | 6 | + | ACACB | | + |
| exon-intron | UQCRQ | 5 | + | CNOT8 | 5 | - |
| exon-exon | NBDY | X | + | LOC389906 | | - |
| intron-exon | ARIH1 | 15 | - | PKM | 15 | - |
| exon-exon | THRA | 17 | - | THRA | 17 | + |
| exon-exon | PGK1 | X | - | THUMPD1 | 16 | - |
| exon-intron | RNU6-3P | X | - | WDR90 | 16 | + |
| exon-exon | H2BC21 | 1 | + | RNF26 | 11 | + |
| exon-exon | PGK1 | X | - | THUMPD1 | 16 | - |
| exon-exon | ZNF772 | 19 | - | VN1R1 | 19 | - |
| exon-intron | PRMT5 | 14 | - | KCNQ3 | 8 | - |
| exon-intron | CANX | 5 | - | TXNRD1 | 12 | + |
| exon-exon | NASP | 1 | + | ATXN2L | 16 | + |
| exon-exon | LOC105377590 | 4 | + | PDLIM3 | | + |
| intron-exon | IGH | 14 | - | IGHV4-34 | 14 | - |
| exon-exon | IGHV4-34 | 14 | - | IGHV4-4 | 14 | - |
| exon-exon | ICAM2 | 17 | + | ENO1 | 1 | - |
| exon-exon | IGHV4-4 | 14 | - | IGHM | 14 | - |
| exon-intron | LAMTOR4 | 7 | + | NYX | | - |
| exon-intron | RPS5 | 19 | + | EP300 | 22 | - |
| exon-intron | RPL7A | 9 | + | ANK2 | 4 | - |
| exon-intron | RPS14 | 5 | - | VPS13B | 8 | - |
| exon-exon | VAMP2 | 17 | + | TAF4 | 20 | - |
| intron-exon | AC010789.1 | | - | LOC105378455 | | - |
| exon-exon | DCUN1D1 | 3 | - | QTRT1 | 19 | + |
| intron-exon | CCDC102B | 18 | + | LASP1 | 17 | + |
| exon-exon | ZNF688 | 16 | + | ZNF785 | 16 | + |
| exon-exon | TMEM189-UBE2V1 | 20 | - | UBE2V1P2 | | - |
| intron-exon | NSG1 | 4 | - | TMEM127 | 2 | - |
| exon-exon | JADE2 | 5 | - | ZNHIT1 | 7 | + |
| intron-exon | ZSCAN5A | 19 | - | ZSCAN5B | | - |
| exon-exon | PKM | 15 | - | RPS3 | 11 | + |
| intron-exon | C16orf74 | 16 | + | RPS15A | 16 | - |
| exon-exon | RPS3A | 4 | + | LAS1L | X | - |
| exon-intron | LOC105378179 | 14 | - | E2F2 | | - |
| exon-exon | ACTB | 7 | - | H19 | 11 | - |
| exon-exon | TMEM97 | 17 | - | MFN2 | 1 | + |
| exon-intron | SEC14L4 | | - | LOC107985579 | | - |
| exon-exon | PHB2 | 12 | - | SPINT1 | 15 | + |
| exon-intron | RPS17 | 15 | - | MFHAS1 | 8 | + |
| exon-intron | WDR5 | 9 | - | BX649632.1 | | - |
| exon-exon | ZNF561 | | + | ZNF561 | 19 | - |
| intron-exon | HNF1A | 12 | - | HNF1A-AS1 | 12 | - |
| exon-intron | UQCRQ | 5 | + | ASCC1 | 10 | - |
| exon-exon | RPL21P16 | 10 | - | RAB5C | 17 | - |
| exon-exon | JTB | 1 | + | JTB | 1 | - |
| exon-intron | MIF | 22 | + | GJC1 | | + |
| exon-exon | RACK1 | 5 | + | NBEAL1 | 2 | + |
| exon-intron | HLA-DRA | 6 | + | CLNS1A | 11 | + |
| exon-exon | RIMS3 | 1 | - | CCT7 | 2 | + |
| exon-intron | ELOF1 | 19 | - | CFAP46 | 10 | + |
| intron-exon | AL023754.1 | | - | LOC105372898 | | - |
| exon-intron | HNRNPA1P48 | 16 | + | GAREM1 | 18 | - |
| exon-exon | MYOD1 | 11 | - | MYOD1 | 11 | + |
| intron-exon | RNU6-13P | | + | RUVBL1 | 3 | - |
| exon-exon | PRC1 | 15 | + | PRC1-AS1 | 15 | + |
| exon-exon | FYN | 6 | + | LOC105377945 | 6 | + |
| intron-exon | CRTC3-AS1 | 15 | - | PRC1 | 15 | - |
| exon-intron | RPAP1 | 15 | - | INS-IGF2 | 11 | - |
| exon-exon | NBPF25P | 1 | - | NBPF20 | 1 | - |
| exon-intron | RPS8 | 1 | + | CNTNAP4 | 16 | + |
| exon-exon | FAM166A | 9 | - | TUBB4B | 9 | - |
| exon-intron | LOC105372426 | 19 | - | PPP5C | 19 | - |
| exon-exon | HMGB1 | 13 | + | EEF1A1 | 6 | + |
| intron-exon | PAK2 | 3 | - | LAMC2 | 1 | + |
| exon-exon | PCGF3 | 4 | + | FAM156B | X | + |
| exon-intron | RNU6-492P | | - | TROAP | 12 | + |
| exon-exon | RNU6-1 | 15 | - | ARF4 | 3 | - |
| exon-exon | WDR77 | 1 | + | HERPUD1 | 16 | + |
| exon-exon | ZNF749 | | + | ZNF419 | | + |
| exon-exon | IMPDH1 | | + | TMCO1 | 1 | - |
| exon-intron | LENG8-AS1 | | - | TARM1 | | - |
| exon-exon | NDRG1 | 8 | - | SLC25A3 | 12 | + |
| intron-exon | ZNF326 | 1 | - | YWHAZ | 8 | - |
| exon-exon | DST | 6 | + | SDF4 | 1 | - |
| exon-exon | JMJD8 | 16 | - | STUB1 | 16 | + |
| exon-exon | ME3-DT | 11 | + | LOC102724775 | 11 | + |
| exon-exon | RPL14 | 3 | - | NCOA3 | 20 | - |
| exon-exon | ZNF672 | 1 | + | ECE1 | 1 | - |
| exon-exon | VPS35 | 16 | + | VPS35 | 16 | - |
| exon-exon | SNRPD2 | 19 | + | VCP | 9 | - |
| exon-exon | PLPPR3 | 19 | - | PTBP1 | 19 | - |
| exon-intron | MAFF | 22 | - | ARFGAP2 | 11 | + |
| exon-exon | VPS53 | 17 | + | STAT2 | 12 | + |
| exon-intron | PTOV1 | 19 | - | PYROXD2 | 10 | + |
| exon-exon | RPL28 | 19 | - | MBD2 | 18 | + |
| exon-exon | CYP26A1 | 10 | - | DGCR2 | 22 | + |
| intron-exon | FAM239A | X | + | FAM239B | X | + |
| exon-exon | MECP2 | X | + | NKIRAS2 | 17 | - |
| exon-intron | SKP1P1 | 7 | - | RP5-1164C1.2 | | - |
| exon-intron | LOC105373150 | | - | AC112493.1 | | - |
| intron-exon | LINC01297-DUXAP10-NBEAP6 | 14 | - | CSAD | 12 | - |
| intron-exon | FBXO16 | 8 | - | LOC105377622 | | - |
| intron-exon | MTOR | 1 | - | SOCS4 | 14 | + |
| exon-exon | FKBP1B | | - | DDX11 | | + |
| exon-exon | NOMO3 | | - | NOMO2 | 16 | - |
| exon-exon | RPL7A | 9 | + | DBH | | + |
| exon-exon | HLA-A | 6 | - | HLA-A | 6 | + |
| exon-intron | RPL8 | 8 | - | GAS7 | 17 | + |
| exon-intron | RPL28 | 19 | + | FECH | 18 | + |
| exon-exon | RUVBL1 | 3 | - | RPL19 | 17 | + |
| exon-intron | RPL17 | 18 | - | THSD4 | 15 | - |
| intron-exon | AC068533.4 | 7 | + | CRCP | 7 | + |
| exon-exon | SH3BP5-AS1 | | + | SH3BP5 | | - |
| exon-intron | RNF40 | 16 | - | CCNB2 | | + |
| exon-intron | CTTN | 11 | + | SOX2-OT | 3 | + |
| exon-intron | RPS19 | 19 | + | ARHGEF12 | 11 | + |
| exon-exon | GNB1 | 1 | + | RPL24P4 | 6 | - |
| exon-intron | MRPL4 | 19 | + | ECI1 | 16 | - |
| exon-intron | AP2S1 | 19 | - | KLHL32 | 6 | + |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-intron | RPL27 | 17 | + | RBFOX1 | 16 | - |
| exon-intron | CAPNS1 | 19 | + | LOC105370241 | | + |
| exon-exon | RPL38 | 17 | + | CITED1 | X | - |
| exon-exon | CAVIN1 | 17 | - | ATP6V1A | 3 | + |
| exon-intron | RPL27A | 11 | + | THRAP3 | 1 | - |
| exon-exon | GPX8 | 5 | + | NUDT4 | 12 | + |
| exon-intron | LOC107986468 | | + | AC134043.2 | | + |
| exon-intron | C19orf33 | | + | CLIP2 | 7 | - |
| exon-exon | ZNF655 | 7 | + | TMEM225B | 7 | + |
| exon-intron | CD320 | 19 | - | RAPGEF2 | | + |
| exon-intron | RPS16 | 19 | - | HIKESHI | 11 | - |
| exon-intron | MRPS12 | 19 | + | TTTY4B | | - |
| exon-exon | TAGLN2 | 1 | + | TAGLN2 | 1 | - |
| exon-intron | FXYD5 | 19 | + | MAGT1 | X | + |
| exon-intron | UQCC2 | 6 | - | KSR1 | 17 | - |
| exon-exon | HNRNPA2B1 | 7 | - | HNRNPUL1 | 19 | + |
| exon-intron | RPL9P8 | 15 | - | UBE2Q2P2 | 15 | - |
| intron-exon | AC073508.2 | | - | CLNS1A | 11 | - |
| exon-intron | MFN1 | 3 | + | USP13 | | + |
| exon-exon | SFPQ | 1 | + | SFPQ | 1 | - |
| intron-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-exon | LASP1 | 17 | + | PPP1R1B | | + |
| exon-intron | EIF3G | 19 | - | HAS2-AS1 | 8 | - |
| exon-exon | PFDN6 | 6 | + | RAVER1 | 19 | - |
| exon-exon | PTK2 | 8 | + | SMAP2 | 1 | - |
| exon-intron | GRPEL1 | 4 | + | REV3L | 6 | + |
| exon-exon | ZNF384 | 12 | + | SDR16C5 | 8 | + |
| exon-intron | LINC00668 | 18 | + | SLC9B1 | 4 | + |
| intron-exon | KIF27 | 9 | + | NPHS2 | 1 | + |
| intron-exon | PGM5 | 9 | + | TMEM252 | 9 | + |
| intron-exon | OSBP | 11 | + | SLC22A5 | 5 | - |
| exon-intron | SKI | 1 | - | COG8 | 16 | + |
| intron-exon | LOC105372860 | 22 | + | MED24 | 17 | + |
| exon-intron | GAL | 11 | - | CLVS1 | 8 | - |
| exon-exon | WASH8P | 12 | + | MYO15B | 17 | - |
| exon-intron | GMPS | 3 | - | AEBP2 | 12 | - |
| exon-intron | MACROH2A2 | 10 | - | GRM5 | 11 | + |
| exon-intron | ARHGAP35 | 19 | - | RERE | 1 | + |
| intron-exon | CLN8 | 8 | + | FLNB | 3 | - |
| exon-exon | PTPN12 | 7 | - | CKAP5 | 11 | + |
| exon-exon | MEG3 | 14 | - | SMG1 | 16 | + |
| intron-exon | LUCAT1 | 5 | + | TCEANC2 | 1 | - |
| exon-exon | TTR | 18 | - | KPNB1 | 17 | - |
| exon-intron | FGFR1 | 8 | + | TCTEX1D2 | 3 | + |
| exon-intron | GPAA1 | 8 | - | KANSL1L | 2 | - |
| exon-exon | HPRT1 | X | - | HNRNPDL | 4 | - |
| exon-exon | SEPTIN2 | 2 | - | SEPTIN2 | 2 | + |
| exon-intron | RPL7L1 | 6 | - | PCBD2 | 5 | - |
| exon-exon | ZCCHC2 | 18 | - | SLC25A14 | X | + |
| exon-intron | HACL1 | 3 | + | ZZEF1 | 17 | + |
| exon-intron | THOC3 | 5 | + | RCBTB2 | 13 | + |
| exon-intron | REEP3 | 10 | - | MSH2 | 2 | - |
| exon-intron | GGT7 | 20 | - | SPEG | 2 | + |
| exon-intron | ZNF14 | 19 | + | BNIP3P12 | 19 | + |
| exon-intron | PBDC1 | X | - | MED13L | 12 | + |
| exon-exon | RNF152 | 18 | - | RNF152 | 18 | + |
| exon-exon | USP49 | 6 | + | MED20 | 6 | + |
| exon-exon | PPP6R2 | 22 | + | SBF1 | 22 | + |
| exon-intron | GAS7 | 17 | + | DENND5A | 11 | + |
| intron-exon | LOC112268284 | 21 | - | GPBP1L1 | 1 | + |
| intron-exon | LOC107984455 | 12 | + | DDX51 | 12 | + |
| exon-exon | AXIN2 | 17 | + | CFDP1 | 16 | + |
| exon-intron | C11orf96 | 11 | + | CRLF3 | 17 | - |
| exon-intron | LINC01431 | 20 | + | SPATA6L | 9 | + |
| exon-intron | RPS18 | 6 | - | PCNP | 3 | - |
| exon-intron | SPSB3 | 16 | - | GBF1 | 10 | - |
| exon-exon | PAFAH1B1 | 17 | - | TAP1 | 6 | + |
| exon-exon | CAP1 | 1 | - | CNTROB | 17 | - |
| exon-exon | PDK2 | 17 | - | PDK2 | 17 | + |
| intron-exon | DHX32 | 10 | - | BCCIP | 10 | - |
| exon-exon | VIL1 | 2 | - | VIL1 | 2 | + |
| exon-exon | VIL1 | 2 | - | VIL1 | 2 | + |
| exon-intron | RPL27A | 11 | + | LOC101928622 | 4 | - |
| exon-intron | RPS14 | 5 | - | TPST1 | 7 | + |
| exon-exon | PSME3 | 17 | - | SREBF2 | 22 | + |
| intron-exon | RAB3GAP2 | 1 | + | MORF4L1P1 | 1 | + |
| exon-intron | RPL17 | 18 | - | UBASH3B | 11 | + |
| exon-intron | UQCRH | 1 | + | PIK3R3 | 1 | + |
| exon-exon | IFNAR1 | 21 | + | USP22 | 17 | - |
| exon-exon | ZC3H14 | 14 | + | EML5 | 14 | - |
| exon-exon | SHISA5 | 3 | - | RPS11P5 | 12 | + |
| intron-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-intron | CCNB1 | 5 | + | RCC2 | 1 | + |
| exon-intron | EEF1A1P6 | 7 | + | EEF1A1P13 | 5 | - |
| exon-intron | NUP58 | | + | LINC02340 | 13 | + |
| intron-exon | TRMT112 | 11 | + | PRDX5 | 11 | + |
| exon-intron | GNG5 | 1 | + | GAREM1 | 18 | - |
| intron-exon | CFAP298-TCP10L | 21 | + | RPS3P3 | 3 | + |
| exon-exon | GSK3B | 3 | - | COX5A | 15 | - |
| exon-intron | NSD3 | 8 | - | CACNB2 | 10 | + |
| exon-exon | RPL29 | 3 | - | JAG1 | 20 | + |
| exon-intron | RPS20 | 8 | - | CDH23 | 10 | + |
| exon-intron | NFE2L3 | 7 | + | EFCAB13 | 17 | - |
| exon-exon | ZNF195 | 11 | - | RPL36A-HNRNPH2 | X | + |
| exon-intron | DAP | 5 | - | CACNA1A | 19 | - |
| intron-exon | DNAJA2 | 16 | - | RPL36A-HNRNPH2 | X | + |
| exon-exon | RPL15 | 3 | - | RPL15 | 3 | + |
| exon-exon | FLNA | X | - | ATP6AP1 | X | + |
| exon-exon | VDAC2P5 | | - | VDAC2 | 10 | + |
| exon-exon | ENTR1 | 9 | + | ENTR1 | 9 | - |
| exon-exon | GRINA | 8 | - | PPP4R2 | 3 | + |
| intron-exon | ZNF765-ZNF761 | 19 | - | ZNF765-ZNF761 | 19 | + |
| intron-exon | ATP6V1H | 8 | + | MRPL15 | 8 | + |
| intron-exon | PAK2 | 3 | - | SLC12A3 | 16 | + |
| exon-intron | PPP1CB | 2 | + | EPSTI1 | 13 | - |
| exon-exon | IGIP | | - | PA2G4 | 12 | + |
| exon-exon | MVB12A | | + | RPL18A | 19 | + |
| exon-intron | KRT80 | 12 | - | DGKZ | 11 | - |
| exon-exon | HIF1A | 14 | + | ROMO1 | 20 | + |
| exon-exon | ZBTB26 | 9 | + | ZBTB26 | 9 | - |
| exon-exon | PRKDC | 8 | + | PRKDC | 8 | - |
| exon-exon | FNDC3B | 3 | - | FNDC3B | 3 | + |
| exon-exon | ZFC3H1 | 12 | + | EEF1A1P5 | 9 | + |
| intron-exon | HOXA10 | 7 | - | HOXA9 | 7 | - |
| exon-exon | GFOD2 | | - | ENKD1 | | - |
| exon-intron | FTH1 | 11 | - | SCHLAP1 | 2 | - |
| intron-exon | GPR155 | 2 | - | SCRN3 | 2 | - |
| exon-exon | ND6 | MT | - | ZNF260 | 19 | + |
| intron-exon | DYNLT3P2 | 2 | - | UGGT1 | 2 | - |
| exon-exon | TERF1 | 8 | - | MLEC | 12 | - |
| exon-intron | NGEF | 2 | + | NRXN2 | 11 | - |
| exon-exon | UFD1 | 22 | + | SET | 9 | - |
| exon-intron | POLR1A | 2 | - | PILRA | 7 | + |
| exon-intron | NXF1 | 11 | + | LOC400541 | 16 | - |
| exon-exon | ATP11AUN | 13 | + | LOC102725228 | 13 | + |
| exon-intron | ZNF667 | 19 | + | RNF19B | 1 | + |
| exon-exon | B3GALNT1 | 3 | + | CBS | 21 | - |
| exon-intron | LOC105376037 | 9 | - | EXOSC3 | 9 | - |
| exon-exon | CPT1B | 22 | + | CHKB | 22 | + |
| exon-exon | TMSB4X | X | - | SRGAP2C | 1 | - |
| exon-intron | CDPF1 | 22 | + | YPEL2 | 17 | - |
| exon-exon | MYC | 8 | - | IGHM | 14 | - |
| exon-exon | IARS1 | 9 | - | IFT46 | 11 | - |
| exon-intron | PSME2P1 | | + | ZNF236 | 18 | - |
| exon-exon | PKD1P5-LOC105376752 | 16 | - | PKD1P4-NPIPA8 | 16 | - |
| exon-exon | IARS1 | 9 | - | IFT46 | 11 | - |
| exon-exon | NUCKS1 | 1 | - | CCDC97 | 19 | + |
| exon-exon | TUBA1A | 12 | - | TUBA1B | 12 | - |
| exon-intron | IGLC2 | 22 | + | IGL | 22 | + |
| intron-exon | IGH | 14 | - | IGHV4-34 | 14 | - |
| exon-intron | RPS25P6 | 5 | - | HADHA | 2 | - |
| exon-intron | RPS18P5 | 3 | - | PCNP | 3 | - |
| intron-exon | DLGAP1 | 18 | + | DLGAP1-AS2 | | + |
| exon-exon | RPSA | 3 | + | MLF2 | 12 | - |
| intron-exon | LOC220729 | 3 | - | KIF3A | 5 | - |
| exon-exon | FTL | 19 | + | COX1 | MT | + |
| exon-exon | CASP6 | 4 | - | ACADSB | 10 | + |
| exon-intron | LOC100288798 | 12 | + | AC008014.1 | | + |
| exon-exon | CXADR | 21 | - | BEX2 | X | - |
| exon-intron | YME1L1 | 10 | - | AC010198.2 | | + |
| exon-exon | ARPC3 | 12 | - | ANAPC7 | 12 | - |
| intron-exon | RPL11 | 1 | - | EPHX1 | 1 | + |
| exon-exon | RPS20 | 8 | + | DDAH2 | 6 | - |
| intron-exon | WDR47 | 1 | - | UBE2N | 12 | - |
| exon-exon | FCF1 | | + | VPS4B | 18 | - |
| exon-exon | NBPF25P | 1 | - | NBPF20 | 1 | - |
| exon-exon | ATL3 | 11 | - | DIP2A | 21 | + |
| exon-intron | CAPZA1 | 1 | + | EIF3J | 15 | - |
| exon-intron | ATP6V1F | | + | FTO | 16 | - |
| exon-intron | RPS14 | 5 | - | FHIT | | + |
| exon-intron | MRPL54 | | + | SCML2 | X | + |
| exon-exon | SMG1 | 16 | - | CHP1 | 15 | + |
| exon-exon | YWHAZ | 8 | + | YWHAZ | 8 | - |
| exon-exon | IBTK | 6 | + | IBTK | 6 | - |
| exon-exon | IBTK | 6 | + | IBTK | 6 | - |
| exon-intron | HNRNPC | 14 | + | C2orf88 | | + |
| exon-exon | RPL15 | 3 | - | RPL15 | 3 | + |
| exon-exon | BTF3 | 5 | - | RPLP2 | 11 | + |
| intron-exon | SEC61A2 | 10 | + | NUDT5 | 10 | - |
| exon-intron | GNG7 | 19 | - | AC103871.1 | | + |
| exon-exon | SKA1 | 18 | + | NBAS | 2 | - |
| exon-exon | EIF3J | 15 | - | EIF3J | 15 | + |
| exon-exon | ND4 | MT | - | ND4L | MT | - |
| exon-intron | UQCRB | 8 | - | ZFR | 5 | + |
| exon-exon | IL6 | 7 | + | TMED10 | 14 | - |
| intron-exon | ATXN2 | 12 | - | NQO1 | 16 | - |
| exon-intron | MRPL44 | 2 | + | GPR160 | 3 | + |
| exon-intron | UQCRBP1 | | - | CELSR1 | | + |
| exon-intron | XAGE1A | | + | MAGT1 | X | + |
| exon-intron | RPL10AP6 | 3 | - | PTPRG | 3 | - |
| intron-exon | APCDD1L-DT | 20 | - | FAT1 | 4 | + |
| exon-exon | EIF4G2 | 11 | + | FOXK2 | 17 | + |
| exon-exon | COMMD2 | 3 | - | POFUT1 | 20 | + |
| exon-intron | SLC39A7 | 6 | + | TTC25 | | - |
| exon-exon | RPL41 | 12 | - | RPS16 | 19 | - |
| exon-exon | RPS16 | 19 | + | MCM5 | 22 | - |
| intron-exon | ASTE1 | 3 | - | ATP2C1 | 3 | - |
| exon-intron | TAF13 | | + | CTNNA1 | 5 | + |
| exon-intron | GID8 | 20 | - | LSG1 | 3 | + |
| intron-exon | KLK3 | 19 | - | ECHDC2 | 1 | + |
| exon-exon | HNRNPD | 4 | + | VAMP2 | 17 | + |
| exon-exon | IVD | 15 | - | TALAM1 | 11 | - |
| exon-intron | SELENBP1 | 1 | + | HCFC1 | X | + |
| exon-intron | RBFA | 18 | - | RBFA | 18 | + |
| exon-exon | LOC101927461 | 10 | - | SYN3 | 22 | - |
| exon-exon | FBXL15 | 10 | - | EGR1 | 5 | + |
| exon-intron | ZMIZ1 | 10 | - | ZMIZ1-AS1 | 10 | - |
| intron-exon | NAA38 | 17 | - | ZXDC | 3 | - |
| exon-exon | TMTC1 | 12 | - | C1orf122 | 1 | + |
| exon-intron | LOC730257 | 1 | + | LOC653513 | 1 | + |
| exon-exon | XRN1 | 3 | - | GNPTAB | 12 | - |
| exon-exon | CTBS | 1 | - | GNG5 | 1 | - |
| exon-exon | LINC00343 | 13 | - | KNTC1 | 12 | - |
| intron-exon | API5 | 11 | - | PLIN3 | 19 | + |
| exon-exon | PCSK7 | 11 | - | RNA45SN2 | 21 | - |
| exon-exon | MAF1 | 8 | - | RNA45SN1 | 21 | - |
| intron-exon | AC226119.1 | 4 | + | LOC100420818 | 4 | + |
| exon-intron | NUDT3 | 6 | - | ZNF273 | 7 | + |
| exon-exon | KLHL5 | 4 | - | MSL2 | 3 | + |
| exon-exon | SLC25A37 | 8 | - | ELF1 | 13 | + |
| exon-exon | EVL | 14 | - | COL4A5 | X | - |
| exon-exon | PGP | 16 | + | LOC112268284 | 21 | - |
| exon-exon | TNFRSF12A | 16 | - | TMEM94 | 17 | - |
| exon-exon | APOL1 | 22 | - | SERPING1 | 11 | - |
| exon-exon | EIF4B | 12 | + | LOC283335 | 12 | + |
| exon-intron | MEST | 7 | + | IGSF5 | 21 | - |
| exon-exon | JAG2 | 14 | - | SFTA3 | 14 | + |
| exon-intron | LOC102546299 | 5 | - | LOC105377703 | 5 | - |
| exon-exon | AARS2 | 6 | + | LYZ | 12 | - |
| intron-exon | AL592295.4 | 1 | - | ABHD4 | 14 | - |
| intron-exon | GPHN | 14 | + | PIGH | 14 | - |
| exon-exon | VWA7 | 6 | - | MSH5-SAPCD1 | 6 | - |
| exon-intron | RNF7 | 3 | - | BRI3BP | 12 | - |
| intron-exon | TESC | 12 | + | FBXW8 | 12 | + |
| exon-intron | RPL8 | 8 | + | WRN | 8 | - |
| exon-intron | BIRC3 | 11 | - | RAB7A | 3 | - |
| exon-intron | ATP5F1B | 12 | + | MSI2 | 17 | - |
| exon-exon | ZFP36L2 | 2 | + | ARHGAP45 | 19 | - |
| exon-exon | E2F5 | 8 | + | BCL11A | 2 | - |
| intron-exon | RAB44 | 6 | + | NIBAN3 | 19 | - |
| exon-exon | ND3 | MT | - | ND3 | MT | + |
| intron-exon | PCGF3 | 4 | + | SH3BP2 | 4 | - |
| exon-intron | ZFAND2A | 7 | + | CDH11 | 16 | + |
| exon-exon | YY1AP1 | 1 | + | YY1AP1 | 1 | - |
| exon-exon | CTSZ | 20 | - | ISCU | 12 | + |
| exon-exon | PTDSS1 | 8 | - | PTDSS1 | 8 | + |
| exon-exon | TCTA | 3 | - | TCTA | 3 | + |
| intron-exon | SAMD4B | 19 | - | ATP6 | MT | + |
| exon-exon | IGLL5 | 22 | - | IGLV1-40 | 22 | - |
| exon-exon | COL6A3 | 2 | - | ARHGEF11 | 1 | - |
| exon-intron | RNA45SN3 | 21 | - | MRPS21 | 1 | + |
| intron-exon | AGAP1 | 2 | + | MYH9 | 22 | - |
| intron-exon | SLC6A11 | 3 | + | KDM4A | 1 | + |
| intron-exon | HSF2BP | 21 | + | ND4 | MT | + |
| exon-intron | GOLGA4 | 3 | - | GRHL1 | 2 | + |
| exon-exon | RPL41P1 | 20 | + | ATP8 | MT | + |
| exon-exon | TALAM1 | 11 | - | MALAT1 | 11 | - |
| intron-exon | C20orf194 | 20 | + | ATP8 | MT | - |
| intron-exon | AP2S1 | 19 | + | CLK3 | 15 | - |
| exon-exon | ATP6V0D1 | 16 | - | ATP6V0D1 | 16 | + |
| exon-exon | MALAT1 | 11 | + | TMBIM6 | 12 | - |
| exon-intron | RNA45SN1 | 21 | - | RNA28SP | 21 | - |
| exon-intron | PBDC1 | X | - | JADE3 | X | + |
| exon-exon | MRPL49 | 11 | + | RNA45SN3 | 21 | - |
| exon-exon | TALAM1 | 11 | - | ANKRD44 | 2 | + |
| exon-intron | FAM72A | 1 | - | AC244035.2 | 1 | - |
| exon-exon | ZHX2 | 8 | - | ZHX2 | 8 | + |
| exon-exon | MED13 | 17 | + | MED13 | 17 | - |
| intron-exon | PRH1-PRR4 | 12 | + | MALAT1 | 11 | + |
| intron-exon | ARID1B | 6 | - | SFPQ | 1 | - |
| exon-exon | ARL5B | 10 | - | ARL5B | 10 | + |
| exon-intron | COPS8 | 2 | - | TAFA1 | 3 | + |
| intron-exon | ARHGAP17 | 16 | - | SNHG29 | 17 | + |
| exon-exon | PTPN18 | 2 | + | WIPI1 | 17 | - |
| intron-exon | AHR | 7 | - | RNA45SN3 | 21 | - |
| exon-intron | RNA45SN2 | 21 | + | RNA18SP5 | 21 | + |
| exon-exon | SON | 21 | - | CD44 | 11 | + |
| exon-intron | CSNK1A1 | 5 | - | TMCO4 | 1 | - |
| exon-intron | SONP1 | 1 | - | KDM3A | 2 | + |
| exon-exon | TUBB | 6 | + | SCD | 10 | + |
| exon-exon | ENGASE | 17 | - | COL5A2 | 2 | - |
| exon-intron | ACTR3 | 2 | + | KDM3A | 2 | + |
| exon-intron | HELLS | 10 | + | GTF2IP1 | 7 | + |
| intron-exon | GTF2IP1 | 7 | + | SCD | 10 | - |
| exon-intron | SCD | 10 | + | SALL4 | 20 | - |
| exon-exon | SPG11 | 15 | - | SPG11 | 15 | + |
| exon-exon | DAB2IP | 9 | + | DAB2IP | 9 | - |
| exon-exon | DAB2IP | 9 | + | DAB2IP | 9 | - |
| exon-exon | TUBA1B | 12 | - | TUBA1B | 12 | + |
| exon-exon | TUBA1C | 12 | - | TUBA1B | 12 | - |
| intron-exon | ZNF678 | 1 | - | ND4 | MT | + |
| exon-intron | ATF7IP | 12 | - | APLP2 | 11 | - |
| intron-exon | UPF3A | 13 | + | PRMT3 | 11 | + |
| intron-exon | LRP4-AS1 | 11 | + | NIPAL2 | 8 | - |
| exon-exon | CA2 | 8 | - | ND1 | MT | + |
| exon-intron | ND4 | MT | - | KDM6A | X | + |
| exon-exon | RND3 | 2 | + | RND3 | 2 | - |
| exon-intron | BASP1 | 5 | - | CDK1 | 10 | + |
| exon-intron | SEC24D | 4 | + | TPM3 | 1 | + |
| exon-exon | ATP6 | MT | - | OLFM4 | 13 | + |
| exon-exon | ARHGEF11 | 1 | + | COL6A3 | 2 | + |
| intron-exon | RNR2 | MT | - | SRP9P1 | 10 | - |
| intron-exon | ARHGEF9 | X | - | DIP2A | 21 | + |
| exon-intron | PEX5 | 12 | - | DENND1C | 19 | - |
| exon-intron | PDLIM5 | 4 | + | PLEKHG1 | 6 | + |
| exon-exon | NRP1 | 10 | + | WDR75 | 2 | + |
| exon-exon | PSMD10 | X | + | PSMD10 | X | - |
| exon-exon | PTPRN2 | 7 | + | PTPRN2 | 7 | - |
| intron-exon | ATP11C | X | - | ND4 | MT | - |
| intron-exon | GDE1 | 16 | + | COX2 | MT | - |
| intron-exon | STT3A | 11 | + | GJA1 | 6 | + |
| exon-intron | PLEC | 8 | - | ERBB2 | 17 | - |
| exon-exon | CLTA | 9 | + | CLTA | 9 | - |
| exon-exon | SLC9A3R1 | 17 | - | SLC9A3R1 | 17 | + |
| exon-exon | PIGR | 1 | + | SERP2 | 13 | + |
| exon-exon | NCL | 2 | - | WDR26 | 1 | - |
| exon-exon | ND4 | MT | + | ND5 | MT | + |
| intron-exon | ARHGEF38 | 4 | + | FAT1 | 4 | + |
| exon-exon | UHRF2 | 9 | - | PUM2 | 2 | - |
| exon-exon | UHRF2 | 9 | - | PUM2 | 2 | - |
| exon-intron | REPS1 | 6 | - | MCM7 | 7 | - |
| exon-exon | ND2 | MT | - | ND5 | MT | - |
| intron-exon | IGL | 22 | - | SLCO5A1 | 8 | + |
| intron-exon | FAM102B | 1 | + | PRPF38B | 1 | + |
| exon-intron | CALM1 | 14 | - | ASCC3 | 6 | - |
| exon-intron | NAA50 | 3 | - | RAB22A | 20 | + |
| intron-exon | SRP9 | 1 | + | WAPL | 10 | + |
| intron-exon | GOLM1 | 9 | - | ACTB | 7 | - |
| exon-exon | ND5 | MT | - | UCP2 | 11 | + |
| intron-exon | CHD4 | 12 | - | CIAO2B | 16 | - |
| exon-exon | RNA45SN1 | 21 | - | HLA-E | 6 | - |
| exon-exon | ALS2CL | 3 | + | MYH9 | 22 | + |
| exon-exon | VPS39 | 15 | + | DTX2P1-UPK3BP1-PMS2P11 | 7 | - |
| exon-intron | GPRC5A | 12 | - | CHN2 | 7 | + |
| intron-exon | ACTR3C | 7 | + | TANK | 2 | + |
| intron-exon | LINC01578 | 15 | - | IPO9 | 1 | - |
| exon-exon | PSAP | 10 | + | PSAP | 10 | - |
| exon-exon | RASA2 | 3 | + | CCT4 | 2 | - |
| exon-intron | CYTB | MT | - | RNR2 | MT | - |
| exon-exon | GDAP2 | 1 | - | DUSP16 | 12 | - |
| exon-exon | KCTD2 | 17 | + | VDAC1 | 5 | - |
| intron-exon | DLGAP1 | 18 | - | IST1 | 16 | - |
| exon-exon | RNF114 | 20 | + | GNAS | 20 | + |
| intron-exon | DLG3 | X | + | SPTBN1 | 2 | - |
| exon-exon | LZIC | 1 | - | LZIC | 1 | + |
| exon-intron | ADK | 10 | + | LSAMP | 3 | - |
| exon-exon | TMEM69 | 1 | - | TMEM69 | 1 | + |
| exon-intron | ADCYAP1R1 | 7 | - | MACF1 | 1 | - |
| exon-exon | TUBA1B | 12 | + | TUBA1C | 12 | + |
| intron-exon | GRIP1 | 12 | - | MAP1B | 5 | - |
| intron-exon | UNC5D | 8 | - | TMOD2 | 15 | + |
| exon-intron | ASAP1 | 8 | + | MDGA2 | 14 | + |
| exon-exon | RNA45SN2 | 21 | - | RNA45SN2 | 21 | + |
| exon-intron | TUBB | 6 | - | TMEM242 | 6 | - |
| intron-exon | MAPK10 | 4 | - | ND1 | MT | + |
| exon-intron | PLD3 | 19 | + | CPNE5 | 6 | - |
| exon-exon | PTK2 | 8 | - | BSN | 3 | - |
| exon-intron | CDK11B | 1 | - | DANT1 | X | + |
| exon-intron | CYTB | MT | + | LOC108021854 | 2 | + |
| exon-intron | HMOX2 | 16 | + | AGO2 | 8 | + |
| exon-exon | ARHGEF4 | 2 | - | LOC107987206 | 14 | + |
| exon-exon | TRAM2 | 6 | - | TCEAL4 | X | - |
| exon-exon | ND2 | MT | + | SATB2 | 2 | - |
| exon-intron | HIP1R | 12 | - | BMS1P20 | 22 | - |
| intron-exon | ELP2 | 18 | - | MAP1A | 15 | - |
| exon-exon | ARHGAP23 | 17 | + | HECTD4 | 12 | - |
| exon-intron | EIF2AK4 | 15 | - | STX18 | 4 | + |
| exon-intron | MBP | 18 | - | MTND1P18 | 10 | - |
| exon-exon | VPS39 | 15 | + | GFAP | 17 | - |
| intron-exon | MBD5 | 2 | - | KIF5C | 2 | - |
| intron-exon | MBD5 | 2 | - | KIF5C | 2 | - |
| exon-exon | ARVCF | 22 | - | SNTA1 | 20 | - |
| intron-exon | DLGAP4-AS1 | 20 | - | DLGAP4 | 20 | - |
| exon-intron | PMS2P8 | 7 | - | AC211486.3 | 7 | + |
| intron-exon | AC211486.3 | 7 | - | PMS2P8 | 7 | + |
| exon-exon | CREBBP | 16 | - | CREBBP | 16 | + |
| exon-exon | SYT2 | 1 | + | CAMK2N1 | 1 | - |
| exon-intron | LINC01578 | 15 | - | ERBIN | 5 | + |
| intron-exon | LINC00461 | 5 | + | EIF5 | 14 | - |
| exon-intron | MALAT1 | 11 | + | MMS22L | 6 | + |
| intron-exon | ATL2 | 2 | - | KIF1B | 1 | - |
| exon-intron | KIF1B | 1 | - | PARD6G-AS1 | 18 | - |
| intron-exon | RERE | 1 | - | HSPH1 | 13 | - |
| exon-exon | CNPY2 | 12 | + | CNPY2 | 12 | - |
| exon-intron | SIRT3 | 11 | + | SLC6A1 | 3 | + |
| exon-exon | MOCS1 | 6 | - | ACTR2 | 2 | - |
| exon-intron | ASAP1 | 8 | - | P4HA3 | 11 | + |
| exon-intron | HSP90B1 | 12 | + | SLC44A2 | 19 | + |
| exon-exon | COX1 | MT | + | ND4 | MT | + |
| exon-exon | POLR3H | 22 | - | ACO2 | 22 | + |
| exon-intron | ND2 | MT | + | SRGAP2D | 1 | + |
| exon-exon | LGALS3BP | 17 | - | EIF4A2 | 3 | - |
| exon-exon | PRRT1 | 6 | + | ZNF571-AS1 | 19 | + |
| intron-exon | TNFAIP8 | 5 | + | CAPN3 | 15 | - |
| exon-exon | FBXO9 | 6 | - | LOC100129503 | 17 | + |
| exon-exon | CLSTN3 | 12 | - | SIRT2 | 19 | + |
| exon-exon | CCDC90B | 11 | - | TPRA1 | 3 | + |
| exon-exon | VAMP2 | 17 | + | BEX2 | X | - |
| intron-exon | SORT1 | 1 | + | TSTD2 | 9 | - |
| exon-exon | MAPT | 17 | - | AMPD2 | 1 | + |
| exon-exon | PMS2P2 | 7 | - | LOC441259 | 7 | - |
| exon-exon | PMS2P2 | 7 | - | PMS2P10 | 7 | - |
| intron-exon | CNOT4 | 7 | + | PMS2P1 | 7 | + |
| exon-intron | RBM17 | 10 | + | ID2 | 2 | - |
| exon-intron | SNHG18 | 5 | + | EP300 | 22 | - |
| intron-exon | PPP1CB | 2 | - | CIDEB | 14 | - |
| exon-intron | CCN3 | 8 | + | UTY | Y | + |
| intron-exon | ENTPD1 | 10 | + | CLTA | 9 | - |
| exon-exon | GPRC5A | 12 | + | DSP | 6 | - |
| exon-intron | ND4 | MT | + | SH3PXD2B | 5 | + |
| exon-intron | FN1 | 2 | - | PIGL | 17 | + |
| exon-exon | NUCKS1 | 1 | + | EPM2AIP1 | 3 | - |
| exon-intron | SERINC3 | 20 | + | PKIG | 20 | + |
| exon-exon | PHF1 | 6 | - | PHF1 | 6 | + |
| exon-exon | NME4 | 16 | + | PLAGL1 | 6 | - |
| exon-intron | RACK1 | 5 | - | LOC107984630 | 14 | - |
| intron-exon | ADIPOR2 | 12 | + | MAZ | 16 | + |
| exon-exon | C9orf72 | 9 | + | C9orf72 | 9 | - |
| intron-exon | PHF12 | 17 | + | SOS2 | 14 | - |
| intron-exon | SF3B3 | 16 | - | NUP88 | 17 | + |
| exon-intron | FAM20B | 1 | + | CRK | 17 | - |
| exon-intron | SEC14L1 | 17 | - | ALKBH3 | 11 | - |
| exon-exon | PSAP | 10 | + | GNAI2 | 3 | - |
| exon-exon | USP40 | 2 | + | PPIH | 1 | - |
| exon-exon | MTHFD1 | 14 | + | UVRAG | 11 | - |
| exon-intron | POGK | 1 | + | HMG20A | 15 | - |
| intron-exon | CHCHD3 | 7 | + | EEF1G | 11 | - |
| exon-exon | LRRFIP1 | 2 | + | B2M | 15 | - |
| exon-exon | RPLP1P4 | 2 | + | MVP | 16 | - |
| exon-exon | PCNX2 | 1 | - | PCNX2 | 1 | + |
| intron-exon | CHIC2 | 4 | + | NME1-NME2 | 17 | + |
| exon-intron | SMPD1 | 11 | + | CAPN10 | 2 | + |
| exon-exon | ATP6 | MT | - | COX3 | MT | - |
| exon-exon | PHKB | 16 | + | FAR1 | 11 | + |
| exon-exon | NRBP2 | 8 | - | NRBP2 | 8 | + |
| exon-intron | TM9SF3 | 10 | - | SNRK | 3 | - |
| exon-intron | RAB22A | 20 | + | TYW3 | 1 | + |
| exon-exon | SLC38A1 | 12 | + | ACTR3 | 2 | - |
| exon-exon | TPT1 | 13 | + | SLC25A46 | 5 | - |
| intron-exon | LOC107984258 | 10 | + | ND4 | MT | - |
| exon-exon | HSPA5 | 9 | + | TBC1D15 | 12 | - |
| exon-exon | PCNX1 | 14 | - | RPL22 | 1 | + |
| exon-intron | PSMC6 | 14 | + | LAPTM4A | 2 | + |
| intron-exon | ATXN1 | 6 | - | NFE2L1 | 17 | - |
| intron-exon | ZBTB20 | 3 | + | CD59 | 11 | - |
| exon-intron | TSG101 | 11 | - | LRMDA | 10 | + |
| exon-exon | HLA-A | 6 | - | SRPRA | 11 | - |
| intron-exon | LINC01376 | 2 | + | ANK3 | 10 | + |
| exon-intron | ZFAND5 | 9 | - | LINC02307 | 14 | - |
| exon-intron | FKBP3 | 14 | + | GMDS-DT | 6 | + |
| exon-exon | MORF4L1P1 | 1 | + | LOC101929007 | 19 | - |
| intron-exon | FITM2 | 20 | - | YTHDC1 | 4 | + |
| exon-intron | CD63 | 12 | + | BICC1 | 10 | + |
| intron-exon | WHAMMP1 | 15 | + | HADHB | 2 | - |
| exon-exon | PUM2 | 2 | - | ZNF143 | 11 | - |
| exon-intron | DSTN | 20 | - | NPIPB5 | 16 | + |
| intron-exon | GNS | 12 | + | ESRP1 | 8 | - |
| exon-exon | USP47 | 11 | + | ZNF320 | 19 | + |
| exon-intron | N4BP2L2 | 13 | + | PDS5B | 13 | + |
| exon-exon | ACTL6A | 3 | - | ACTL6A | 3 | + |
| exon-exon | PUM2 | 2 | - | ATF5 | 19 | + |
| intron-exon | PMF1-BGLAP | 1 | + | SEC62 | 3 | - |
| exon-intron | MAP4K4 | 2 | - | ZGPAT | 20 | + |
| exon-exon | HLA-DPA1 | 6 | + | HLA-DPA1 | 6 | - |
| exon-exon | SON | 21 | + | ATP6 | MT | + |
| exon-exon | CYTB | MT | + | ND5 | MT | + |
| intron-exon | MED13 | 17 | + | MAT2A | 2 | + |
| intron-exon | ETV6 | 12 | + | ND4 | MT | + |
| exon-intron | ND5 | MT | + | STT3A-AS1 | 11 | - |
| exon-exon | ZKSCAN1 | 7 | + | ZKSCAN1 | 7 | - |
| exon-intron | ND5 | MT | + | BACE2 | 21 | + |
| intron-exon | RYR2 | 1 | - | IWS1 | 2 | - |
| exon-exon | FMNL3 | 12 | - | PFKM | 12 | + |
| exon-exon | CD2BP2 | 16 | + | ARAP1 | 11 | - |
| exon-exon | ND1 | MT | - | IGFBP5 | 2 | + |
| intron-exon | LRCH4 | 7 | - | TBC1D1 | 4 | - |
| intron-exon | SYNRG | 17 | + | ADAR | 1 | - |
| intron-exon | KIF1B | 1 | - | ERRFI1 | 1 | - |
| exon-exon | CYTB | MT | - | ND4 | MT | - |
| intron-exon | RPS6KA2 | 6 | + | RNASET2 | 6 | + |
| exon-intron | ND1 | MT | + | TNFRSF14 | 1 | + |
| exon-exon | LOC107987135 | 9 | - | PRRC2B | 9 | - |
| exon-intron | PERP | 6 | + | SSBP1 | 7 | + |
| exon-exon | COX3 | MT | + | COX1 | MT | + |
| intron-exon | SDK2 | 17 | + | RNA45SN1 | 21 | - |
| exon-exon | SPRR2A | 1 | + | SPRR2F | 1 | + |
| exon-exon | GANAB | 11 | + | GANAB | 11 | - |
| exon-exon | PLAAT4 | 11 | - | CDC42SE1 | 1 | + |
| exon-exon | SGCG | 13 | + | CASP7 | 10 | + |
| intron-exon | DSCAM | 21 | - | SCN3B | 11 | + |
| intron-exon | SNX25 | 4 | + | PPP2CA | 5 | + |
| exon-exon | LOC100131689 | 14 | + | PDCD10 | 3 | - |
| exon-exon | TUBG2 | 17 | - | TUBG1 | 17 | + |
| exon-exon | SREBF2 | 22 | - | MUC4 | 3 | - |
| exon-exon | LAMC2 | 1 | - | LAMC2 | 1 | + |
| exon-intron | BCAM | 19 | - | ATP11B | 3 | - |
| exon-intron | LOC112268284 | 21 | - | RNA18SP5 | 21 | - |
| exon-exon | CAMK1D | 10 | - | OPLAH | 8 | - |
| exon-exon | LAMA5 | 20 | - | MSLN | 16 | - |
| exon-exon | CTNNA1 | 5 | + | CTNNA1 | 5 | - |
| exon-exon | COL17A1 | 10 | + | SRD5A1 | 5 | + |
| exon-intron | CPM | 12 | + | LOC105374216 | 3 | + |
| exon-exon | SPRR1A | 1 | + | SPRR1B | 1 | + |
| exon-exon | SPRR2E | 1 | + | PCYOX1 | 2 | - |
| exon-intron | TRMT112 | 11 | - | RNA18SP5 | 21 | + |
| exon-exon | SMAD4 | 18 | + | RPS4X | X | + |
| exon-exon | ND4 | MT | + | UBA52 | 19 | + |
| exon-intron | MALAT1 | 11 | + | ABCC1 | 16 | - |
| exon-intron | HNRNPA2B1 | 7 | - | LOC100506639 | 5 | + |
| exon-intron | MTMR4 | 17 | + | ABR | 17 | - |
| exon-exon | TCF20 | 22 | - | TM2D2 | 8 | - |
| exon-intron | DUSP5 | 10 | + | CERT1 | 5 | + |
| exon-exon | CKAP4 | 12 | + | CKAP4 | 12 | - |
| intron-exon | CDK10 | 16 | - | KIF1C | 17 | - |
| exon-intron | KRT14 | 17 | + | KRT16 | 17 | + |
| exon-exon | ND1 | MT | + | SRSF9 | 12 | + |
| exon-intron | LAMB3 | 1 | + | KIFC3 | 16 | - |
| exon-intron | TPM4 | 19 | + | ANKRD13A | 12 | + |
| intron-exon | ZHX2 | 8 | + | ND4 | MT | + |
| exon-intron | SUSD4 | 1 | - | CRCT1 | 1 | + |
| exon-exon | VPS72 | 1 | + | TGM3 | 20 | - |
| exon-exon | PANK3 | 5 | - | RHOA | 3 | + |
| exon-intron | DTX3L | 3 | + | NFXL1 | 4 | - |
| exon-exon | HSP90AA1 | 14 | + | NCOA1 | 2 | - |
| exon-intron | MPC1 | 6 | - | GULP1 | 2 | - |
| exon-intron | HECTD1 | 14 | - | HECTD1 | 14 | + |
| exon-intron | TEX2 | 17 | + | RABGEF1 | 7 | + |
| intron-exon | IGH | 14 | + | IGHG1 | 14 | + |
| intron-exon | PLXNA2 | 1 | + | RPS24P2 | 14 | - |
| exon-exon | EHD2 | 19 | + | SYPL1 | 7 | - |
| exon-intron | SNX5 | 20 | - | ABCA5 | 17 | + |
| exon-exon | CELSR1 | 22 | + | GLTP | 12 | + |
| exon-exon | PLP2 | X | + | TIMM17B | X | - |
| exon-exon | TOMM6 | 6 | - | LDB1 | 10 | + |
| exon-intron | KRT6C | 12 | + | KRT6A | 12 | + |
| exon-exon | LDHA | 11 | - | DIO2 | 14 | + |
| exon-exon | S100A7A | 1 | + | DDX10 | 11 | + |
| exon-exon | GJB2 | 13 | + | RAB1B | 11 | + |
| exon-intron | DYRK1A | 21 | + | PRRC2C | 1 | - |
| intron-exon | WWC1 | 5 | + | C1orf74 | 1 | - |
| exon-intron | SNRPF | 12 | - | TOM1 | 22 | - |
| intron-exon | NHSL1 | 6 | - | PIM1 | 6 | - |
| exon-intron | SNHG32 | 6 | - | LINC02885 | 22 | + |
| exon-exon | IL4R | 16 | + | S100A16 | 1 | + |
| exon-exon | KMT5A | 12 | - | KMT5A | 12 | + |
| exon-exon | S100A16 | 1 | - | EGR1 | 5 | + |
| exon-exon | CHP1 | 15 | - | MSN | X | + |
| intron-exon | NEDD4 | 15 | + | TGFBI | 5 | - |
| exon-exon | KRT17 | 17 | - | CUL3 | 2 | - |
| exon-exon | KRT14 | 17 | + | NIBAN2 | 9 | + |
| intron-exon | TSPAN7 | X | + | TPT1 | 13 | + |
| exon-exon | STYXL1 | 7 | + | PPIL2 | 22 | - |
| exon-intron | CHEK2P4 | 22 | - | MON2 | 12 | - |
| exon-exon | NEB | 2 | - | RIPK4 | 21 | - |
| exon-intron | KLK6 | 19 | - | GPR137 | 11 | + |
| exon-exon | FUT3 | 19 | + | NUP98 | 11 | - |
| intron-exon | NAV2 | 11 | + | DGKA | 12 | - |
| exon-intron | CHST15 | 10 | + | TACC2 | 10 | - |
| exon-exon | APOL1 | 22 | + | LYPD3 | 19 | + |
| exon-exon | FUT3 | 19 | + | LTO1 | 11 | - |
| intron-exon | RABAC1 | 19 | - | GSTM1 | 1 | + |
| intron-exon | TENM4 | 11 | + | CALR | 19 | + |
| exon-exon | AKR1C2 | 10 | + | CALR | 19 | - |
| exon-exon | DSG3 | 18 | + | TRMT44 | 4 | + |
| intron-exon | SH3D21 | 1 | + | PRMT1 | 19 | + |
| exon-exon | ABCC10 | 6 | + | PGBD5 | 1 | + |
| exon-intron | RPL14P1 | 12 | - | STAG3L2 | 7 | + |
| exon-exon | RPL19 | 17 | + | SPRR2D | 1 | - |
| exon-intron | SNRPC | 6 | - | LOC102723798 | 19 | + |
| intron-exon | SMAD3 | 15 | - | PHLDB1 | 11 | - |
| intron-exon | LRP11 | 6 | + | MTMR11 | 1 | + |
| exon-exon | SON | 21 | + | KLF6 | 10 | - |
| exon-intron | SUDS3 | 12 | - | HLA-A | 6 | + |
| intron-exon | PPP6R2 | 22 | - | INTS3 | 1 | - |
| intron-exon | IMMP2L | 7 | - | SRF | 6 | - |
| intron-exon | RPA1 | 17 | - | GDI2 | 10 | + |
| exon-exon | ND4 | MT | + | JUP | 17 | - |
| exon-intron | ND4 | MT | + | ATF7IP | 12 | - |
| exon-exon | ND2 | MT | + | ND6 | MT | + |
| exon-exon | NACA | 12 | - | NACA | 12 | + |
| exon-intron | IGLL5 | 22 | - | IGL | 22 | - |
| exon-intron | IGLL5 | 22 | - | LOC105372948 | 22 | - |
| exon-intron | IGLL5 | 22 | - | LOC105372948 | 22 | - |
| exon-exon | JAK1 | 1 | - | ATF3 | 1 | + |
| exon-intron | ND1 | MT | + | TLK2 | 17 | - |
| intron-exon | CCNI | 4 | + | COX3 | MT | + |
| exon-intron | USP8 | 15 | + | ASH1L | 1 | + |
| exon-exon | KAT6B | 10 | - | LYN | 8 | + |
| intron-exon | AKR1C2 | 10 | + | CLSTN1 | 1 | + |
| exon-exon | PKNOX1 | 21 | - | PKNOX1 | 21 | + |
| exon-exon | UBE3A | 15 | - | PTP4A2 | 1 | + |
| intron-exon | C1RL | 12 | - | TALAM1 | 11 | - |
| exon-exon | PSMD2 | 3 | - | INPP1 | 2 | - |
| exon-exon | KRT13 | 17 | + | DCTN1 | 2 | + |
| intron-exon | SLC6A15 | 12 | - | NR1D1 | 17 | + |
| exon-exon | KCNK1 | 1 | + | MKNK2 | 19 | + |
| exon-exon | IGHG2 | 14 | + | IGHG2 | 14 | - |
| exon-intron | IGFBP7 | 4 | + | LOC105369944 | 12 | - |
| intron-exon | NFU1 | 2 | - | LYZ | 12 | + |
| intron-exon | FAM157C | 16 | - | CYTB | MT | - |
| intron-exon | LOC100505918 | 1 | - | IFI16 | 1 | - |
| intron-exon | ACBD6 | 1 | + | HDGFL3 | 15 | + |
| exon-intron | MRPS25 | 3 | - | EYA1 | 8 | + |
| intron-exon | AC231533.1 | X | - | SUV39H1 | X | - |
| exon-exon | PGAM5 | 12 | + | ZNF26 | 12 | + |
| exon-exon | KIF13B | 8 | - | TRAP1 | 16 | - |
| exon-intron | LOC151760 | | - | NECTIN3-AS1 | 3 | - |
| exon-exon | UBTF | 17 | - | TK1 | 17 | - |
| exon-exon | HMGN2 | 1 | + | RPL3 | 22 | - |
| exon-exon | PYCR1 | 17 | + | FKBP4 | 12 | + |
| exon-exon | HELZ2 | 20 | + | HELZ2 | 20 | - |
| intron-exon | TEAD4 | 12 | - | TEAD4 | 12 | + |
| exon-intron | PRDX6 | 1 | + | COL18A1 | 21 | - |
| exon-intron | NDUFA11 | 19 | - | AGBL1 | | + |
| exon-exon | VDAC3 | 8 | + | CDKN1B | 12 | + |
| exon-intron | RPL13AP5 | 10 | + | JAM2 | 21 | + |
| exon-intron | RPLP2 | 11 | + | DSCAM | 21 | + |
| exon-exon | DGAT1 | 8 | - | ELOC | 8 | - |
| exon-intron | SS18L2 | 3 | + | MIDEAS | 14 | - |
| exon-exon | ZNF83 | 19 | - | EXOC3L2 | 19 | - |
| exon-exon | RPS2P5 | 12 | + | RPS3AP6 | 15 | + |
| intron-exon | DMRTC1 | | - | DEXI | 16 | - |
| exon-exon | SLC31A1 | 9 | + | EPB41 | 1 | + |
| exon-intron | LGALS1 | 22 | + | DLGAP4-AS1 | 20 | + |
| exon-intron | RPL27A | 11 | + | LINC02885 | 22 | + |
| intron-exon | LMO7 | 13 | + | TGFBI | 5 | + |
| exon-intron | ATP5F1D | 19 | + | HMGXB4 | 22 | - |
| exon-exon | KRT17 | 17 | - | KRT14 | 17 | - |
| exon-exon | AVPI1 | | - | PI4K2A | 10 | - |
| exon-exon | ATP5F1E | 20 | + | SLMO2-ATP5E | 20 | + |
| exon-intron | PWWP3A | | + | PIWIL2 | | + |
| exon-exon | PRPF38B | 1 | + | CMSS1 | 3 | + |
| exon-exon | CMC1 | 3 | + | AZI2 | 3 | - |
| exon-exon | SLC25A29 | 14 | - | YY1 | 14 | - |
| exon-exon | SLC25A3 | 12 | - | TSNAX-DISC1 | 1 | - |
| exon-intron | COX5B | 2 | + | NUMB | 14 | + |
| exon-intron | RPS16 | 19 | - | TSC22D1 | 13 | + |
| exon-intron | RPL23A | 17 | + | LOC105379109 | 5 | + |
| exon-exon | COX6B1 | 19 | + | TUBB3 | 16 | + |
| exon-exon | LDOC1 | X | + | NGDN | 14 | + |
| exon-intron | SPON1 | 11 | + | LINC02545 | | + |
| exon-intron | LHX4-AS1 | | - | RP11-146E13.4 | | + |
| exon-exon | HMGB3 | | + | NAB1 | 2 | + |
| exon-exon | DDI2 | 1 | - | DDI2 | 1 | + |
| exon-exon | TKT | 3 | + | YLPM1 | 14 | + |
| exon-exon | SRRT | 7 | - | ATP5MC3 | 2 | - |
| exon-intron | UBAC2 | 13 | + | MYOF | 10 | + |
| exon-intron | RPS5 | 19 | + | CLIP2 | 7 | - |
| exon-exon | BCAP31 | X | + | BCAP31 | X | - |
| exon-intron | FEM1A | 19 | - | GS1-124K5.11 | 7 | - |
| exon-intron | LOC105374836 | 2 | + | INHBA-AS1 | 7 | - |
| exon-intron | FBL | 19 | - | TMEM131 | 2 | - |
| exon-intron | RPS2 | 16 | - | GAB1 | 4 | - |
| exon-intron | TIMM50 | 19 | + | LOC105370263 | | - |
| exon-exon | RMND5A | 2 | - | ND2 | MT | + |
| exon-intron | PLPP2 | 19 | - | SLC30A8 | | + |
| exon-intron | MBOAT7 | | - | UNC13C | 15 | - |
| exon-exon | CCN1 | 1 | + | ND2 | MT | + |
| exon-exon | DVL3 | 3 | - | ND1 | MT | + |
| exon-exon | ITPRIPL2 | 16 | + | DSG2 | 18 | + |
| exon-exon | ACTN1 | 14 | + | ACTN1 | 14 | - |
| exon-exon | PLP2 | X | + | PLP2 | X | - |
| exon-exon | PLP2 | X | + | PLP2 | X | - |
| exon-exon | KMT2C | 7 | + | KMT2C | 7 | - |
| exon-exon | ARIH1 | 15 | + | NCSTN | 1 | + |
| exon-exon | UBC | 12 | + | ENPP6 | 4 | - |
| exon-exon | EIF3C | 16 | - | HSPA8 | 11 | + |
| exon-exon | IRX3 | 16 | + | MYH9 | 22 | + |
| exon-exon | TKFC | 11 | + | PPM1M | 3 | - |
| exon-exon | LTBR | 12 | - | WDTC1 | 1 | + |
| exon-intron | IGKC | 2 | + | IGK | 2 | + |
| intron-exon | LOC107984026 | 10 | - | TBC1D2B | 15 | + |
| exon-intron | BGN | X | - | POU6F2 | 7 | + |
| exon-exon | POGLUT1 | 3 | - | POGLUT1 | 3 | + |
| exon-exon | DDX17 | 22 | + | DDX17 | 22 | - |
| exon-exon | LINC01000 | 7 | + | EGFR | 7 | + |
| exon-intron | LINC00997 | 7 | - | DPY19L1P1 | 7 | - |
| exon-exon | TMSB4X | X | + | ANGPTL2 | 9 | - |
| exon-exon | CALR | 19 | - | CALR | 19 | + |
| intron-exon | LINC01372 | 7 | - | LAMC1 | 1 | + |
| intron-exon | ST20-MTHFS | 15 | - | ABCF1 | 6 | + |
| intron-exon | TRIM2 | 4 | + | ACTB | 7 | - |
| exon-intron | NPEPPS | 17 | - | TEAD1 | 11 | + |
| exon-exon | CTSO | 4 | - | PCID2 | 13 | - |
| intron-exon | STX8 | 17 | - | ACTB | 7 | - |
| exon-exon | KCTD12 | 13 | - | MATN2 | 8 | - |
| exon-intron | RHOF | 12 | - | PLEKHO1 | 1 | - |
| exon-exon | IFIT2 | 10 | - | FUT10 | 8 | - |
| exon-exon | RNA45SN1 | 21 | - | GON4L | 1 | - |
| intron-exon | ZNF559-ZNF177 | 19 | - | PDE6B | 4 | - |
| exon-exon | SPOCK2 | 10 | - | RNA45SN2 | 21 | + |
| exon-exon | SPTAN1 | 9 | + | CIAO3 | 16 | - |
| exon-exon | HIPK2 | 7 | - | HIPK2 | 7 | + |
| exon-intron | TALAM1 | 11 | - | MX2 | 21 | + |
| exon-exon | SEC62 | 3 | + | SEC62 | 3 | - |
| exon-intron | MALAT1 | 11 | + | PBX1 | 1 | - |
| exon-exon | CYTB | MT | - | ND6 | MT | + |
| exon-intron | ATP6 | MT | - | MTATP6P1 | 1 | + |
| exon-exon | ND6 | MT | - | DBI | 2 | + |
| exon-exon | COX3 | MT | + | ATP6 | MT | + |
| exon-exon | PRKAG2 | 7 | + | MALAT1 | 11 | - |
| exon-exon | TALAM1 | 11 | - | MALAT1 | 11 | - |
| exon-intron | RER1 | 1 | + | KIF26B-AS1 | 1 | - |
| exon-intron | CXXC4 | 4 | - | DSCAM | 21 | - |
| exon-exon | TXNIP | 1 | - | NPC2 | 14 | + |
| intron-exon | STIM1 | 11 | - | VAMP2 | 17 | - |
| exon-intron | GATD1 | 11 | + | MVB12A | 19 | + |
| intron-exon | MFSD14C | 9 | + | SCDP1 | 17 | - |
| exon-intron | PRRC2B | 9 | + | ZNF333 | 19 | + |
| exon-intron | SMC4 | 3 | + | MAST4 | 5 | - |
| exon-exon | TMEM158 | 3 | + | RYR1 | 19 | - |
| exon-exon | C6 | 5 | - | HUWE1 | X | + |
| exon-exon | DMRTC1B | X | - | TMEM158 | 3 | + |
| exon-exon | NID2 | 14 | - | RAB7A | 3 | + |
| exon-intron | CD44 | 11 | + | TNR | 1 | - |
| exon-exon | ZBTB20 | 3 | - | FGF14 | 13 | + |
| intron-exon | HIVEP3 | 1 | + | MED24 | 17 | + |
| exon-intron | USH1C | 11 | - | SRPRA | 11 | + |
| exon-exon | PBX3 | 9 | - | TTC3 | 21 | - |
| exon-intron | GIMAP1-GIMAP5 | 7 | - | PHACTR3 | 20 | - |
| exon-intron | AGRN | 1 | - | YWHAQ | 2 | + |
| exon-exon | SIX2 | 2 | - | EPB41 | 1 | - |
| exon-exon | HDLBP | 2 | + | RNA45SN3 | 21 | - |
| intron-exon | LINC00673 | 17 | + | CRYAB | 11 | - |
| exon-intron | EIF2AK1 | 7 | + | HTRA2 | 2 | + |
| exon-intron | SLPI | 20 | - | LRP1 | 12 | - |
| exon-exon | ACOX1 | 17 | + | MYSM1 | 1 | + |
| exon-exon | NME1-NME2 | 17 | + | THRA | 17 | + |
| exon-exon | NECAP2 | 1 | - | NECAP2 | 1 | + |
| exon-exon | TCF25 | 16 | - | COX1 | MT | + |
| intron-exon | ZNF708 | 19 | + | PTPRZ1 | 7 | + |
| exon-intron | SPARC | 5 | + | PCNX1 | 14 | - |
| intron-exon | SNX8 | 7 | + | SNAPC4 | 9 | - |
| exon-exon | ND4 | MT | - | CAPZA1 | 1 | + |
| exon-exon | ND2 | MT | + | ND4 | MT | + |
| exon-exon | C10orf88 | 10 | - | CMC2 | 16 | - |
| exon-intron | ARFIP1 | 4 | + | PPP2R2B | 5 | - |
| exon-exon | IFITM1 | 11 | + | ND5 | MT | + |
| intron-exon | PHLPP1 | 18 | - | GPM6A | 4 | + |
| exon-exon | INPPL1 | 11 | - | INPPL1 | 11 | + |
| exon-exon | SAT1 | X | - | SERPINE1 | 7 | - |
| intron-exon | GON4L | 1 | - | ND5 | MT | + |
| exon-intron | HNRNPA1L2 | 13 | - | CCEPR | 10 | + |
| intron-exon | TP53BP2 | 1 | - | ND5 | MT | + |
| intron-exon | DTNA | 18 | + | ND2 | MT | + |
| exon-intron | NTRK2 | 9 | + | NPIPB11 | 16 | + |
| exon-exon | ND4L | MT | + | ND4 | MT | + |
| exon-intron | MPZL1 | 1 | - | APPL1 | 3 | + |
| exon-exon | USP24 | 1 | + | ND4 | MT | + |
| intron-exon | R3HCC1L | 10 | - | SLC30A4 | 15 | - |
| exon-exon | RBMX | X | + | ZYG11B | 1 | + |
| intron-exon | COL20A1 | 20 | - | RBMX | X | - |
| exon-exon | MAP2 | 2 | - | IQCB1 | 3 | + |
| exon-intron | ND4 | MT | + | SIPA1L2 | 1 | + |
| exon-exon | FN1 | 2 | + | MEST | 7 | + |
| intron-exon | DDX3P1 | X | + | ALDH3A2 | 17 | - |
| exon-intron | ICE2 | 15 | - | LOC112268302 | X | - |
| exon-exon | ZNF439 | 19 | - | PAK2 | 3 | - |
| exon-intron | FBXO3 | 11 | + | NT5C2 | 10 | - |
| exon-intron | MAP1B | 5 | + | RARS2 | 6 | - |
| intron-exon | MTND2P28 | 1 | - | ND2 | MT | - |
| exon-exon | ND2 | MT | - | MYL6 | 12 | + |
| exon-exon | IRF2BP2 | 1 | - | CALM1 | 14 | + |
| exon-exon | GLUL | 1 | - | SLC24A2 | 9 | - |
| intron-exon | SOX6 | 11 | + | NONOP1 | 16 | + |
| exon-intron | PWWP2A | 5 | - | FTX | X | - |
| exon-intron | CLU | 8 | + | KIF18B | 17 | - |
| intron-exon | AP4S1 | 14 | + | PCYOX1 | 2 | + |
| exon-exon | NONOP1 | 16 | + | NONO | X | + |
| exon-intron | DPYSL3 | 5 | - | ZNF226 | 19 | + |
| intron-exon | PRDM2 | 1 | + | TFG | 3 | - |
| exon-intron | LOC644422 | 17 | + | RBCK1 | 20 | + |
| exon-exon | NFIA | 1 | - | NFIA | 1 | + |
| exon-intron | TF | 3 | - | TTL | 2 | + |
| exon-intron | GABBR2 | 9 | - | UBE2H | 7 | + |
| intron-exon | HTT | 4 | - | TMED4 | 7 | + |
| exon-intron | ZDHHC21 | 9 | + | ATP6 | MT | + |
| intron-exon | CLCC1 | 1 | + | SAMD4A | 14 | + |
| exon-exon | TALAM1 | 11 | - | MALAT1 | 11 | + |
| exon-exon | ACSL6 | 5 | + | ACSL6 | 5 | - |
| exon-intron | ATP8 | MT | + | CYP4X1 | 1 | + |
| exon-exon | CLBA1 | 14 | + | CLBA1 | 14 | - |
| exon-exon | AGPAT1 | 6 | + | AGPAT1 | 6 | - |
| exon-exon | ATP8 | MT | + | RNA45SN2 | 21 | - |
| exon-exon | MACF1 | 1 | + | ST6GALNAC5 | 1 | + |
| exon-intron | PSPH | 7 | + | EFNB2 | 13 | + |
| exon-exon | ND2 | MT | + | ND5 | MT | + |
| intron-exon | DOCK9 | 13 | - | ND2 | MT | + |
| exon-intron | HNRNPA2B1 | 7 | - | LOC100288637 | 15 | - |
| exon-exon | RNA45SN3 | 21 | - | VGLL4 | 3 | - |
| exon-exon | PRPS2 | X | - | PRPS2 | X | + |
| intron-exon | KLF5 | 13 | + | TSC22D2 | 3 | + |
| exon-exon | RGPD2 | 2 | + | TRA2B | 3 | + |
| exon-intron | SSB | 2 | + | NPIPB3 | 16 | - |
| exon-exon | MAPKAPK2 | 1 | - | CD81 | 11 | + |
| exon-exon | APBB2 | 4 | + | TMSB4X | X | + |
| exon-exon | MTR | 1 | - | CC2D2A | 4 | - |
| intron-exon | MAP4K4 | 2 | + | GRIA1 | 5 | + |
| exon-exon | UNC13A | 19 | + | UNC13A | 19 | - |
| exon-intron | ND4 | MT | - | MAPT-AS1 | 17 | - |
| exon-exon | AK1 | 9 | - | GIMAP4 | 7 | - |
| exon-exon | TGFB2 | 1 | - | CDH2 | 18 | - |
| exon-exon | RPL4 | 15 | + | MAST3 | 19 | - |
| exon-exon | LBHD1 | 11 | - | LBHD1 | 11 | + |
| exon-exon | APP | 21 | + | PLAGL2 | 20 | + |
| exon-exon | CDK13 | 7 | - | CDK13 | 7 | + |
| exon-exon | FOXO1 | 13 | + | RB1CC1 | 8 | - |
| intron-exon | EML2 | 19 | + | FOXO1 | 13 | + |
| intron-exon | PPARD | 6 | - | ATP6 | MT | - |
| exon-exon | CSH2 | 17 | + | BGN | X | - |
| intron-exon | MVB12B | 9 | + | PCNX1 | 14 | - |
| exon-exon | PRPF38B | 1 | - | CSH2 | 17 | + |
| intron-exon | IST1 | 16 | - | PRCP | 11 | - |
| exon-intron | METAP2 | 12 | - | WDR61 | 15 | + |
| intron-exon | EXOC6B | 2 | + | NEAT1 | 11 | - |
| exon-exon | PSG3 | 19 | + | PSG11 | 19 | + |
| exon-exon | TALAM1 | 11 | - | MALAT1 | 11 | + |
| exon-exon | MYO1E | 15 | - | MYO1E | 15 | + |
| exon-exon | SDC1 | 2 | - | SDC1 | 2 | + |
| exon-exon | IQGAP1 | 15 | + | SRSF4 | 1 | + |
| exon-intron | USP47 | 11 | - | ZNF609 | 15 | - |
| exon-exon | ATG4B | 2 | + | CHRDL1 | X | - |
| exon-intron | HLTF | 3 | + | HDAC4 | 2 | - |
| exon-intron | HLTF | 3 | + | HDAC4 | 2 | - |
| exon-intron | TRIM26 | 6 | + | PSMD1 | 2 | - |
| exon-intron | NREP | 5 | - | PKP4 | 2 | - |
| intron-exon | ZNF528 | 19 | + | CALM2 | 2 | - |
| exon-exon | ZFHX3 | 16 | - | ND2 | MT | + |
| exon-intron | UBA5 | 3 | + | NPHP3-ACAD11 | 3 | - |
| intron-exon | STX6 | 1 | + | ND1 | MT | + |
| intron-exon | LOC105376220 | 9 | - | TVP23C-CDRT4 | 17 | - |
| intron-exon | GAB2 | 11 | - | TPT1 | 13 | + |
| exon-exon | IGLL5 | 22 | - | SETBP1 | 18 | - |
| exon-exon | SORBS1 | 10 | - | EEF1A1P5 | 9 | - |
| exon-exon | FAM110A | 20 | + | HECTD3 | 1 | + |
| exon-intron | ANKS6 | 9 | - | SEC62 | 3 | + |
| exon-exon | ND1 | MT | - | RALY | 20 | - |
| exon-intron | FBLN1 | 22 | - | LINC00342 | 2 | + |
| exon-exon | UBXN4 | 2 | + | SUGP2 | 19 | - |
| exon-exon | PLAGL1 | 6 | + | VDAC2 | 10 | - |
| exon-exon | LSAMP | 3 | + | LSAMP | 3 | - |
| intron-exon | NCOR1 | 17 | - | HIF1AN | 10 | + |
| exon-exon | SMURF2 | 17 | + | FAM120A | 9 | + |
| exon-exon | TUBA1C | 12 | + | TUBA1B | 12 | - |
| intron-exon | MAGI1 | 3 | - | JUN | 1 | + |
| intron-exon | CPSF2 | 14 | - | EGR1 | 5 | + |
| intron-exon | TCF7L2 | 10 | - | KIAA2013 | 1 | + |
| exon-exon | SYNPO | 5 | + | ZC3H13 | 13 | + |
| exon-intron | FAM219B | 15 | - | NXN | 17 | - |
| intron-exon | VANGL2 | 1 | + | PRKX | X | - |
| exon-exon | LOC100130899 | 22 | - | CDC42 | 1 | - |
| exon-exon | ARSDP1 | Y | + | GYG2P1 | Y | + |
| exon-intron | HSPA8 | 11 | - | PATJ | 1 | + |
| intron-exon | SHISA6 | 17 | + | HDHD2 | 18 | - |
| exon-exon | H3-3B | 17 | + | KCTD18 | 2 | + |
| exon-exon | GUCD1 | 22 | + | GUCD1 | 22 | - |
| exon-exon | NBPF19 | 1 | - | NBPF9 | 1 | - |
| exon-exon | WIPI2 | 7 | - | WIPI2 | 7 | + |
| exon-exon | RFX1 | 19 | + | RFX1 | 19 | - |
| exon-exon | LOC100129931 | 4 | - | TBC1D14 | 4 | - |
| exon-exon | ANKRD17 | 4 | + | ANKRD17 | 4 | - |
| exon-intron | TCAF1P1 | 7 | + | STRN3 | 14 | - |
| intron-exon | DOCK3 | 3 | + | PKP4 | 2 | + |
| intron-exon | STRBP | 9 | + | MYO1C | 17 | + |
| exon-exon | DOT1L | 19 | + | NEAT1 | 11 | + |
| exon-intron | PPRC1 | 10 | + | LINC00174 | 7 | + |
| intron-exon | LOC105374928 | 6 | - | PTK2 | 8 | - |
| exon-intron | LRR1 | 14 | - | ZP3 | 7 | - |
| exon-exon | HIPK1 | 1 | - | UROD | 1 | + |
| exon-exon | AZGP1P1 | 7 | + | DDIT4 | 10 | + |
| exon-exon | MERTK | 2 | - | SHISA5 | 3 | + |
| exon-intron | SEH1L | 18 | + | MTCH1 | 6 | - |
| intron-exon | PTPRG | 3 | + | TOPORS | 9 | + |
| exon-exon | TPM3 | 1 | - | TALAM1 | 11 | - |
| intron-exon | PRR5-ARHGAP8 | 22 | - | ANKRD40 | 17 | - |
| intron-exon | DPM1 | 20 | - | MIR100HG | 11 | - |
| exon-exon | PIGT | 20 | - | CUX2 | 12 | + |
| exon-exon | MRPS27 | 5 | - | PPP1R26-AS1 | 9 | - |
| exon-intron | PRKCSH | 19 | + | GANAB | 11 | - |
| exon-intron | RAB1A | 2 | - | SLC35D1 | 1 | - |
| intron-exon | LOC729732 | 8 | - | ZNF207 | 17 | - |
| intron-exon | BPTF | 17 | + | RAP2B | 3 | - |
| exon-exon | BAZ2A | 12 | + | BAZ2A | 12 | - |
| intron-exon | MTATP6P1 | 1 | - | ATP6 | MT | + |
| exon-intron | RUFY3 | 4 | - | ARIH1 | 15 | - |
| exon-exon | KRT17 | 17 | + | CYTH2 | 19 | - |
| intron-exon | NFE2L3 | 7 | - | SMS | X | - |
| exon-exon | DDIT4 | 10 | - | CSNK1D | 17 | - |
| exon-exon | PHLDA1 | 12 | - | PHLDA1 | 12 | + |
| exon-exon | NAT1 | 8 | + | NAT1 | 8 | - |
| exon-exon | CKMT1B | 15 | + | CKMT1B | 15 | - |
| exon-exon | TALAM1 | 11 | - | LAMB1 | 7 | + |
| intron-exon | AC069277.1 | | + | LOC105376944 | | + |
| intron-exon | KCNJ16 | | - | LOC112267896 | | - |
| exon-intron | RPL8 | 8 | - | SORL1 | 11 | - |
| exon-intron | EEF1AKMT2 | 10 | - | UNC5D | | - |
| exon-exon | RPL14 | 3 | + | EP400 | 12 | + |
| exon-intron | PTPRN | 2 | - | HPN | 19 | - |
| exon-intron | CKB | 14 | - | PKHD1 | 6 | - |
| exon-intron | PSTPIP2 | 18 | - | EPG5 | 18 | - |
| exon-exon | ATAD3B | 1 | + | ATAD3A | 1 | + |
| exon-intron | PSTPIP2 | 18 | - | EPG5 | 18 | - |
| exon-exon | NORAD | 20 | - | ATP6 | MT | + |
| exon-exon | PSMD1 | 2 | + | PTMA | 2 | + |
| exon-exon | SMS | X | - | SMS | X | + |
| exon-exon | H3-3A | 1 | + | WEE1 | 11 | + |
| exon-intron | ILF2 | 1 | - | POM121C | 7 | + |
| intron-exon | BLCAP | 20 | - | EEF1B2 | 2 | + |
| exon-intron | COX7A2 | 6 | - | INTS6-AS1 | | - |
| intron-exon | GASK1A | 3 | - | FAM120A | 9 | + |
| exon-exon | GTF2H2B | 5 | - | GTF2H2C | 5 | + |
| exon-intron | DVL3 | 3 | + | ACO2 | 22 | - |
| exon-exon | EEF1A1P5 | 9 | + | LOC146253 | 16 | + |
| intron-exon | LOC105371795 | 17 | + | UBE2D2 | 5 | + |
| exon-exon | REPIN1 | 7 | - | REPIN1 | 7 | + |
| exon-intron | PFDN5 | 12 | + | FOXP1 | 3 | - |
| exon-intron | CDC42P6 | 4 | - | GBA3 | 4 | - |
| exon-exon | RPL4P4 | 3 | - | RPS19 | 19 | + |
| exon-exon | LUCAT1 | 5 | - | LOC107986433 | | - |
| exon-exon | PVT1 | 8 | + | LINC00824 | 8 | - |
| exon-intron | MYO1C | 17 | - | YWHAE | 17 | - |
| exon-exon | HSP90AB1 | 6 | + | HMGB1 | 13 | - |
| exon-intron | TMEM163 | 2 | - | AC073928.2 | 2 | - |
| exon-exon | NPM1 | 5 | + | ND2 | MT | + |
| intron-exon | HNRNPUL2-BSCL2 | 11 | + | YY1AP1 | 1 | - |
| exon-intron | COA3 | 17 | - | FBXO36 | 2 | - |
| exon-exon | ATP2C1 | 3 | + | SYT17 | 16 | + |
| exon-exon | CDK5RAP3 | 17 | - | CDK5RAP3 | 17 | + |
| exon-exon | LOC440300 | | + | SURF4 | 9 | - |
| exon-exon | ZFAND6 | 15 | - | BLMH | 17 | - |
| exon-exon | APEH | 3 | - | APEH | 3 | + |
| exon-exon | TMEM64 | 8 | + | COPE | 19 | - |
| exon-exon | H2AZ2 | 7 | - | RARA | 17 | + |
| exon-intron | RNU6-2 | 19 | + | GPAA1 | 8 | + |
| intron-exon | CNE9 | | + | HSP90AB3P | 4 | - |
| exon-exon | SYNE2 | 14 | + | ESR2 | | + |
| intron-exon | AC073928.2 | 2 | - | DLX6-AS1 | 7 | - |
| exon-intron | EIF3G | 19 | - | LINGO2 | | + |
| exon-intron | TMEM163 | 2 | - | AC073928.2 | 2 | - |
| intron-exon | ZC3H12B | | + | HSP90AA1 | 14 | - |
| exon-exon | KDM1A | 1 | - | GAPDH | 12 | + |
| exon-intron | GPX1 | 3 | - | LOC105373137 | X | - |
| exon-intron | LY6E | 8 | + | LOC105377220 | | - |
| exon-exon | RPL38 | 17 | + | ATP5PO | 21 | - |
| exon-exon | COMMD7 | | + | COMMD7 | | - |
| exon-exon | EIF3A | 10 | - | SMARCC1 | 3 | - |
| exon-intron | SSBP4 | 19 | + | YY1 | 14 | - |
| exon-intron | IRF2BP2 | 1 | + | RAN | 12 | + |
| exon-intron | MADD | 11 | - | MADD | 11 | + |
| exon-intron | LOC107984489 | 12 | + | OVOS | 12 | + |
| intron-exon | CDKL1 | 14 | - | TNS3 | 7 | + |
| intron-exon | ALG11 | 13 | + | ND6 | MT | + |
| exon-intron | HEBP2 | 6 | - | LINC02458 | 12 | - |
| intron-exon | TLE3 | 15 | + | HGS | 17 | + |
| exon-intron | SPCS1 | 3 | + | RPL23AP82 | 22 | + |
| intron-exon | SNX30 | 9 | + | TPT1 | 13 | + |
| exon-exon | CAPN7 | 3 | + | ACTR2 | 2 | + |
| exon-intron | LOC105375563 | 7 | + | RNR1 | MT | + |
| exon-exon | CD44 | 11 | - | PTGES3 | 12 | + |
| exon-exon | GDE1 | 16 | + | EIF4G2 | 11 | + |
| exon-exon | ND1 | MT | + | CYTB | MT | + |
| exon-intron | EZR | 6 | - | NBAS | 2 | - |
| intron-exon | SPOCK1 | 5 | - | FIP1L1 | 4 | + |
| exon-intron | ITPRIP | 10 | + | LRMDA | 10 | + |
| exon-intron | ND4 | MT | + | MTND4P12 | 5 | - |
| intron-exon | RCC1 | 1 | - | LOC146253 | 16 | + |
| exon-exon | P3H1 | 1 | - | P3H1 | 1 | + |
| exon-exon | FEZ2 | 2 | - | FEZ2 | 2 | + |
| exon-exon | DKK3 | 11 | + | DKK3 | 11 | - |
| exon-intron | VKORC1L1 | 7 | + | MEG3 | 14 | + |
| exon-exon | SNRNP200 | 2 | - | RBM26 | 13 | - |
| intron-exon | CSNK1D | 17 | + | FN1 | 2 | + |
| exon-exon | TPM4 | 19 | - | SEPTIN7 | 7 | - |
| exon-exon | COL3A1 | 2 | - | ND6 | MT | + |
| exon-exon | RNA45SN1 | 21 | - | FAM118B | 11 | + |
| intron-exon | PDE3A | 12 | + | RNA45SN3 | 21 | + |
| exon-intron | SLC25A46 | 5 | - | FMR1 | X | - |
| exon-exon | DENR | 12 | - | CMBL | 5 | + |
| exon-exon | SERPINA3 | 14 | - | SERPINA3 | 14 | + |
| intron-exon | UFD1 | 22 | + | REST | 4 | - |
| intron-exon | COX10-AS1 | 17 | - | HNRNPU | 1 | + |
| intron-exon | ZNF529-AS1 | 19 | + | NEAT1 | 11 | + |
| exon-exon | HNRNPC | 14 | - | ZC3H15 | 2 | + |
| exon-exon | UBXN7 | 3 | + | UBXN7 | 3 | - |
| exon-intron | ITGB1 | 10 | + | ADGRE3 | 19 | + |
| exon-exon | BAZ1B | 7 | + | BAZ1B | 7 | - |
| exon-intron | ATP1A1 | 1 | + | ATP1A1-AS1 | 1 | - |
| exon-exon | HSP90B1 | 12 | - | CDH1 | 16 | - |
| intron-exon | YWHAZ | 8 | + | EIF4A2 | 3 | + |
| intron-exon | DLG2 | 11 | - | PTGFRN | 1 | + |
| intron-exon | BCAR3 | 1 | + | RAD23B | 9 | - |
| exon-intron | IGFBP3 | 7 | - | LOC112268284 | 21 | - |
| exon-intron | GABRP | 5 | - | ITGA6 | 2 | - |
| exon-exon | SERPINA3 | 14 | + | PATL1 | 11 | + |
| exon-intron | TPT1 | 13 | + | TMEM236 | 10 | + |
| exon-intron | NACA | 12 | - | NDUFB6 | 9 | + |
| intron-exon | FOXP1 | 3 | - | SMS | X | + |
| exon-exon | NFE2L1 | 17 | - | ATP5MG | 11 | + |
| exon-exon | NIPSNAP3A | 9 | + | NIPSNAP3B | 9 | + |
| exon-intron | GRIK1-AS2 | 21 | + | LOC105371084 | 16 | + |
| exon-exon | CTSZ | 20 | - | COX1 | MT | + |
| exon-exon | MALAT1 | 11 | + | ZFAND5 | 9 | + |
| exon-exon | CERS6-AS1 | 2 | - | SPP1 | 4 | + |
| exon-intron | ZNF24 | 18 | - | AC015987.1 | 7 | + |
| exon-exon | IFI44L | 1 | + | IFI44L | 1 | - |
| intron-exon | LOC107985481 | 21 | - | SON | 21 | - |
| exon-intron | IFIT3 | 10 | + | ATXN7 | 3 | + |
| intron-exon | GPD2 | 2 | - | RASAL2 | 1 | + |
| exon-intron | FAP | 2 | - | MYO18A | 17 | + |
| intron-exon | PPP6R3 | 11 | - | RNA45SN2 | 21 | + |
| intron-exon | PLCL1 | 2 | + | MALAT1 | 11 | + |
| intron-exon | RNA28SP | 21 | + | RPS2P23 | 5 | + |
| exon-exon | SON | 21 | - | PKM | 15 | + |
| exon-exon | VPS39 | 15 | + | VPS39 | 15 | - |
| exon-exon | CANT1 | 17 | + | CANT1 | 17 | - |
| exon-exon | ZNF207 | 17 | - | ZNF207 | 17 | + |
| exon-exon | RPA1 | 17 | + | RPA1 | 17 | - |
| exon-intron | PSMA6 | 14 | - | GCLC | 6 | - |
| intron-exon | XPO6 | 16 | - | AKAP13 | 15 | - |
| exon-exon | WFDC2 | 20 | - | WFDC2 | 20 | + |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN1 | 21 | + |
| intron-exon | RNR1 | MT | - | MYO1D | 17 | + |
| intron-exon | TMEM132C | 12 | + | CDH1 | 16 | + |
| exon-intron | CHIC1 | X | - | ZNF350 | 19 | - |
| intron-exon | KLHDC1 | 14 | - | MCL1 | 1 | + |
| exon-intron | IGKC | 2 | + | NANS | 9 | + |
| exon-intron | RNA45SN1 | 21 | - | NLRP3 | 1 | - |
| exon-exon | G6PD | X | - | G6PD | X | + |
| exon-intron | SLC9A3R1 | 17 | - | SLC25A53 | X | - |
| intron-exon | LRMDA | 10 | + | SPG7 | 16 | + |
| exon-exon | EEF1A1P6 | 7 | - | EEF1A1P11 | 1 | - |
| exon-intron | KPNA2 | 17 | + | MKNK1 | 1 | + |
| intron-exon | RHOJ | 14 | + | WAC | 10 | + |
| intron-exon | IGKC | 2 | + | WAC | 10 | - |
| intron-exon | AP2A1 | 19 | - | NECAB3 | 20 | + |
| intron-exon | SEPTIN9 | 17 | + | THBS1 | 15 | - |
| intron-exon | PTPN2 | 18 | + | MGRN1 | 16 | + |
| exon-exon | DNAJC5 | 20 | - | MED1 | 17 | - |
| exon-exon | NUCB1 | 19 | + | SCN8A | 12 | - |
| exon-intron | DUSP3 | 17 | + | PABPC4-AS1 | 1 | + |
| exon-exon | FASN | 17 | + | LAMB1 | 7 | - |
| exon-exon | DDX42 | 17 | - | RNA45SN3 | 21 | + |
| exon-intron | ANKHD1-EIF4EBP3 | 5 | - | CATSPER3 | 5 | - |
| exon-exon | SET | 9 | - | SETP14 | 3 | - |
| exon-intron | SZT2 | 1 | + | SHB | 9 | + |
| exon-exon | RAB35 | 12 | - | SLC25A36 | 3 | - |
| exon-intron | AQP1 | 7 | - | RNR1 | MT | - |
| exon-exon | NUP188 | 9 | + | POLR2A | 17 | + |
| exon-exon | SRGAP1 | 12 | + | MTRNR2L10 | X | - |
| exon-exon | BTRC | 10 | + | ACIN1 | 14 | + |
| exon-exon | ACIN1 | 14 | - | PTMA | 2 | + |
| exon-exon | TNRC18 | 7 | + | ITGA3 | 17 | - |
| exon-exon | MIDEAS | 14 | + | CELF1 | 11 | + |
| exon-exon | IGKC | 2 | - | FHL3 | 1 | + |
| exon-intron | SLC3A1 | 2 | + | ITGA8 | 10 | - |
| exon-exon | CDC42EP3P1 | 19 | + | ND5 | MT | - |
| exon-exon | CDHR5 | 11 | + | HGS | 17 | - |
| exon-exon | CYTB | MT | - | ND5 | MT | - |
| exon-exon | RNA45SN2 | 21 | + | ETV6 | 12 | + |
| exon-intron | TOLLIP | 11 | - | LOC729732 | 8 | - |
| exon-intron | XPC | 3 | - | AC093495.1 | 3 | - |
| exon-intron | FOSB | 19 | - | CTPS2 | X | + |
| exon-exon | HEG1 | 3 | - | ATP6 | MT | - |
| exon-intron | CNTROB | 17 | - | PRKG1 | 10 | - |
| intron-exon | SRGN | 10 | - | ALAS1 | 3 | - |
| intron-exon | TRAK1 | 3 | - | RUSC1 | 1 | - |
| exon-exon | BST2 | 19 | + | BST2 | 19 | - |
| exon-exon | CNPY2 | 12 | + | CNPY2 | 12 | - |
| exon-exon | CLIC3 | 9 | + | LOC112268284 | 21 | - |
| exon-exon | RNA45SN1 | 21 | + | PTPN18 | 2 | + |
| exon-intron | RNA45SN2 | 21 | + | RNA18SP5 | 21 | - |
| intron-exon | VAPA | 18 | - | CLNS1A | 11 | + |
| exon-exon | QTRT2 | 3 | + | PABPC1 | 8 | + |
| exon-exon | SZRD1 | 1 | + | SPATA21 | 1 | - |
| exon-exon | CBLB | 3 | + | CBLB | 3 | - |
| intron-exon | SFTPB | 2 | - | SFTPB | 2 | + |
| exon-exon | TMCO4 | 1 | + | TMCO4 | 1 | - |
| exon-exon | ND1 | MT | - | RNA45SN2 | 21 | + |
| exon-exon | CD74 | 5 | - | CD74 | 5 | + |
| exon-exon | HLA-E | 6 | - | HLA-E | 6 | + |
| intron-exon | IGL | 22 | + | RNA45SN2 | 21 | - |
| exon-intron | MXRA5 | X | - | TFCP2 | 12 | - |
| exon-exon | TMEM150A | 2 | + | RPL18 | 19 | - |
| exon-exon | STT3A | 11 | - | ANTXR1 | 2 | + |
| exon-exon | MYH11 | 16 | - | LSS | 21 | - |
| exon-intron | CEP95 | 17 | - | TBL1X | X | - |
| intron-exon | BRF1 | 14 | - | CALR | 19 | - |
| exon-exon | RPRD2 | 1 | - | MYH11 | 16 | + |
| exon-exon | ND2 | MT | + | MUC5AC | 11 | + |
| exon-exon | ATP6 | MT | - | IDH3A | 15 | + |
| intron-exon | AGAP1 | 2 | + | SORBS2 | 4 | - |
| exon-exon | TTBK2 | 15 | + | EEF1A1P5 | 9 | - |
| exon-exon | SKAP2 | 7 | + | SKAP2 | 7 | - |
| exon-exon | CNPPD1 | 2 | - | DHCR24 | 1 | - |
| exon-intron | CYTB | MT | + | HECW2 | 2 | + |
| exon-exon | RBIS | 8 | - | E2F5 | 8 | + |
| exon-intron | BLMH | 17 | - | SLC2A1 | 1 | - |
| exon-intron | PSME2 | 14 | - | ABHD18 | 4 | - |
| exon-intron | IGLC3 | 22 | - | IGL | 22 | - |
| exon-exon | IGHG3 | 14 | - | IGHG1 | 14 | - |
| exon-exon | ND6 | MT | - | ND5 | MT | - |
| exon-exon | KCNK6 | 19 | - | KCNK6 | 19 | + |
| intron-exon | AXL | 19 | + | ND2 | MT | - |
| exon-exon | QARS1 | 3 | - | QARS1 | 3 | + |
| exon-exon | CAPNS1 | 19 | + | CAPNS1 | 19 | - |
| exon-exon | JCAD | 10 | - | SRRT | 7 | + |
| exon-intron | GPNMB | 7 | - | TM9SF4 | 20 | - |
| exon-exon | SLCO2A1 | 3 | + | DAG1 | 3 | - |
| exon-exon | HMBOX1 | 8 | - | HMBOX1 | 8 | + |
| exon-exon | RNA45SN3 | 21 | + | IER2 | 19 | + |
| exon-exon | RNA45SN1 | 21 | + | RN7SL4P | 3 | + |
| intron-exon | PAX7 | 1 | + | LMOD1 | 1 | + |
| exon-exon | EEF1A1P11 | 1 | - | PIGL | 17 | - |
| exon-exon | PDCD6IP | 3 | + | PDCD10 | 3 | - |
| exon-exon | RERE | 1 | - | RERE | 1 | + |
| intron-exon | RILPL1 | 12 | + | SEC24C | 10 | + |
| exon-intron | SULT2B1 | 19 | - | GOLGB1 | 3 | - |
| intron-exon | KAT8 | 16 | - | GTPBP4 | 10 | - |
| exon-exon | C1R | 12 | + | MYO9B | 19 | + |
| exon-exon | IGHG1 | 14 | + | EVC | 4 | - |
| exon-exon | CFL1 | 11 | - | ZC3H12A | 1 | + |
| intron-exon | LOC105378642 | 1 | - | IGHA1 | 14 | + |
| exon-exon | SBNO2 | 19 | - | CFL1 | 11 | - |
| exon-exon | SFSWAP | 12 | - | YBX1 | 1 | - |
| exon-exon | TPI1 | 12 | + | ND2 | MT | + |
| intron-exon | LOC102723543 | 1 | - | BRI3 | 7 | + |
| exon-exon | RPL10P2 | 6 | + | RPL10P9 | 5 | - |
| exon-exon | TMEM189-UBE2V1 | 20 | + | CLU | 8 | + |
| exon-intron | LITAF | 16 | - | DBNL | 7 | + |
| exon-intron | TMC4 | 19 | - | COQ5 | 12 | - |
| exon-exon | SMARCC2 | 12 | + | CEP95 | 17 | - |
| exon-intron | DPYSL3 | 5 | - | VPS37B | 12 | - |
| exon-intron | UBXN1 | 11 | - | POU2F1 | 1 | + |
| exon-exon | CYP27A1 | 2 | + | CALR | 19 | + |
| exon-intron | CHST15 | 10 | + | RBM4B | 11 | + |
| intron-exon | PICK1 | 22 | - | SPINT2 | 19 | + |
| exon-intron | LDLRAD4 | 18 | + | BRF1 | 14 | - |
| exon-exon | STX17 | 9 | - | CALR | 19 | - |
| intron-exon | SLC30A9 | 4 | - | SPTBN1 | 2 | + |
| exon-exon | ABCA2 | 9 | - | ATP2B2 | 3 | - |
| exon-intron | XPO6 | 16 | - | EIF3E | 8 | - |
| exon-exon | FLNA | X | + | FLNA | X | - |
| exon-exon | MTOR | 1 | - | MTOR | 1 | + |
| exon-exon | ANKRD28 | 3 | - | ANKRD28 | 3 | + |
| exon-exon | FAM120AOS | 9 | - | RNA45SN3 | 21 | - |
| exon-exon | CLPB | 11 | + | ATP1A2 | 1 | + |
| exon-exon | EEF1A1 | 6 | + | PLBD1 | 12 | - |
| exon-exon | RASSF2 | 20 | + | FGR | 1 | + |
| intron-exon | UBE4A | 11 | - | HIPK1 | 1 | - |
| exon-exon | EMC7 | 15 | - | DYNLL1 | 12 | - |
| exon-exon | LRRC37B | 17 | - | PIGS | 17 | + |
| exon-intron | SMARCC2 | 12 | + | ALOX5 | 10 | - |
| exon-intron | SMAD7 | 18 | + | LOC107986007 | 3 | - |
| exon-exon | HTT | 4 | + | FAM219B | 15 | - |
| intron-exon | CPNE2 | 16 | - | SORT1 | 1 | + |
| exon-exon | RPL4 | 15 | + | RPL4 | 15 | - |
| intron-exon | PDXDC1 | 16 | + | SESN3 | 11 | + |
| exon-exon | SNX1 | 15 | - | SNX1 | 15 | + |
| exon-exon | ND2 | MT | + | ND2 | MT | - |
| exon-exon | AUP1 | 2 | + | AUP1 | 2 | - |
| intron-exon | AEBP2 | 12 | - | FARP1 | 13 | + |
| exon-exon | XPO6 | 16 | - | NCOA3 | 20 | + |
| intron-exon | FAM149B1 | 10 | + | DBT | 1 | + |
| exon-exon | PTTG1IP | 21 | - | PTTG1IP | 21 | + |
| exon-exon | ATP6 | MT | - | ND5 | MT | - |
| exon-exon | MVB12B | 9 | - | MVB12B | 9 | + |
| exon-exon | MMP2 | 16 | - | INS-IGF2 | 11 | - |
| exon-exon | GSN | 9 | - | UBC | 12 | - |
| intron-exon | RETREG1 | 5 | + | TMSB10 | 2 | + |
| exon-intron | ND2 | MT | - | LOC643339 | 12 | - |
| intron-exon | PCNX2 | 1 | + | ND4 | MT | + |
| exon-exon | CDK5RAP3 | 17 | + | CDK5RAP3 | 17 | - |
| intron-exon | PDGFRA | 4 | + | EFNB3 | 17 | + |
| exon-intron | ND2 | MT | - | ASTN2 | 9 | + |
| exon-intron | ATP8 | MT | + | PPIP5K1P1-CATSPER2 | 15 | + |
| intron-exon | ACTA2 | 10 | + | ACTA2 | 10 | - |
| exon-intron | ATP8 | MT | + | PCNX2 | 1 | - |
| exon-intron | ATP6 | MT | + | COL10A1 | 6 | - |
| exon-intron | ND4 | MT | + | MRPL13 | 8 | + |
| exon-intron | LOC105375835 | 8 | - | LOC105377975 | 6 | + |
| exon-intron | TIMP2 | 17 | + | CEMIP | 15 | + |
| exon-exon | LMOD1 | 1 | + | NPNT | 4 | - |
| exon-intron | LMOD1 | 1 | + | AL513217.1 | 1 | + |
| exon-intron | PCGF3 | 4 | + | STAG3L1 | 7 | + |
| exon-exon | TBC1D3L | 17 | + | C15orf62 | 15 | + |
| exon-exon | LINC01000 | 7 | - | PPP1CA | 11 | - |
| exon-exon | ITM2C | 2 | - | NUMA1 | 11 | + |
| exon-intron | VPS4A | 16 | + | KLK3 | 19 | + |
| intron-exon | LOC100133286 | 21 | + | MTOR | 1 | - |
| exon-intron | TLE5 | 19 | - | MPHOSPH10 | 2 | + |
| intron-exon | ADK | 10 | + | PPP1R12B | 1 | + |
| exon-exon | CDC42BPA | 1 | + | CALR | 19 | + |
| exon-intron | PPP1R12A | 12 | - | APC | 5 | + |
| exon-exon | CRY2 | 11 | - | RTN4 | 2 | - |
| exon-intron | NOL7 | 6 | + | RANBP9 | 6 | - |
| exon-intron | ZNF510 | 9 | - | CFL1 | 11 | - |
| exon-exon | CTNNB1 | 3 | + | MRPS33 | 7 | - |
| intron-exon | SBF2 | 11 | + | KTN1 | 14 | + |
| exon-exon | THRAP3 | 1 | - | TALAM1 | 11 | - |
| intron-exon | UBTF | 17 | - | SEC61A1 | 3 | + |
| intron-exon | PLCB1 | 20 | - | GTF2A1 | 14 | + |
| exon-intron | RPL26L1 | 5 | - | SKIL | 3 | + |
| exon-exon | NFYC | 1 | + | MYH11 | 16 | - |
| exon-intron | RNA45SN3 | 21 | - | SORBS1 | 10 | + |
| intron-exon | RBM6 | 3 | - | ABCG2 | 4 | - |
| intron-exon | COL4A6 | X | - | ZNF589 | 3 | + |
| exon-exon | DAZAP2 | 12 | + | ACTG1 | 17 | + |
| intron-exon | TMTC1 | 12 | - | CANX | 5 | + |
| intron-exon | CALD1 | 7 | + | CRYZL1 | 21 | + |
| exon-exon | GNL3L | X | + | SENP6 | 6 | - |
| exon-intron | FLT1 | 13 | + | LOC100507053 | 4 | - |
| exon-intron | PHF14 | 7 | - | PPA2 | 4 | - |
| exon-exon | DICER1 | 14 | + | CCDC14 | 3 | + |
| exon-exon | PKN2 | 1 | - | SOX9 | 17 | - |
| exon-exon | LOXL4 | 10 | - | ETF1 | 5 | - |
| intron-exon | RAPGEF1 | 9 | + | WNK1 | 12 | + |
| exon-intron | ROBO1 | 3 | + | ACKR3 | 2 | + |
| exon-intron | CREBBP | 16 | + | LRRFIP1 | 2 | - |
| exon-exon | COX1 | MT | - | EPHB6 | 7 | - |
| exon-exon | PGM5 | 9 | - | CTSL | 9 | - |
| exon-exon | LOC101927864 | 17 | - | PDCD6IP | 3 | + |
| exon-exon | UBR4 | 1 | - | MICAL1 | 6 | - |
| exon-exon | NUMB | 14 | + | SRP14 | 15 | + |
| exon-exon | ATP5MD | 10 | - | BAIAP2 | 17 | - |
| exon-exon | CLIP4 | 2 | + | SETD5 | 3 | + |
| intron-exon | RP11-499F3.2 | 15 | + | EFL1 | 15 | + |
| exon-exon | EPC1 | 10 | - | RBM47 | 4 | + |
| intron-exon | PER3 | 1 | + | RBM47 | 4 | - |
| exon-exon | PUM2 | 2 | - | ZNF334 | 20 | + |
| exon-intron | NUP214 | 9 | + | ARHGAP26 | 5 | - |
| intron-exon | CSNK1D | 17 | - | WNK1 | 12 | + |
| intron-exon | THCAT158 | 17 | - | CALCOCO1 | 12 | - |
| intron-exon | FKBP9 | 7 | - | PRKDC | 8 | - |
| exon-intron | CNN3 | 1 | - | GGT7 | 20 | - |
| intron-exon | FUCA2 | 6 | - | SSR2 | 1 | + |
| exon-intron | ATP6 | MT | + | PCBP2 | 12 | + |
| exon-exon | MAPKAPK2 | 1 | - | TIMP3 | 22 | + |
| exon-intron | DENND4B | 1 | - | TRIT1 | 1 | - |
| exon-exon | MYH11 | 16 | + | ND4 | MT | + |
| exon-intron | NDUFV1 | 11 | + | CD99L2 | X | - |
| exon-intron | XIRP1 | 3 | + | IFT88 | 13 | + |
| exon-exon | ZZEF1 | 17 | + | TIGIT | 3 | + |
| exon-intron | MYH11 | 16 | - | TBC1D2B | 15 | + |
| intron-exon | BRF1 | 14 | - | IFT88 | 13 | - |
| exon-intron | ATXN1 | 6 | - | PRICKLE2 | 3 | + |
| exon-intron | NFASC | 1 | - | PUM3 | 9 | - |
| intron-exon | LPP | 3 | + | GNL2 | 1 | - |
| exon-intron | MLXIP | 12 | + | SLIT3 | 5 | + |
| exon-exon | CCT4 | 2 | - | HEXIM1 | 17 | - |
| exon-exon | CALR | 19 | + | MCM3 | 6 | - |
| intron-exon | SMG6 | 17 | + | ITFG2 | 12 | + |
| exon-intron | STT3A | 11 | + | UBQLN4 | 1 | - |
| exon-exon | ZNFX1 | 20 | + | CCDC181 | 1 | + |
| intron-exon | PARD3B | 2 | - | EIF4EBP2 | 10 | + |
| exon-exon | C13orf46 | 13 | - | CTTN | 11 | - |
| intron-exon | ACTN1 | 14 | - | CNOT10 | 3 | - |
| intron-exon | RNR1 | MT | - | MRPL37 | 1 | - |
| intron-exon | MICAL3 | 22 | - | PPT1 | 1 | + |
| exon-exon | TALAM1 | 11 | - | CD59 | 11 | + |
| exon-exon | FLNA | X | - | FLNA | X | + |
| exon-exon | EXOC7 | 17 | + | MYADM | 19 | + |
| exon-exon | HDAC11 | 3 | - | TEAD3 | 6 | + |
| exon-intron | TUBA1B | 12 | + | HK1 | 10 | - |
| intron-exon | SLC2A9 | 4 | - | SPRR4 | 1 | + |
| exon-intron | EGFR | 7 | - | MAP7 | 6 | + |
| intron-exon | MTCL1 | 18 | + | ND4 | MT | - |
| exon-exon | GMPPB | 3 | - | GMPPB | 3 | + |
| intron-exon | MDM2 | 12 | - | ERG28 | 14 | + |
| intron-exon | WWOX | 16 | + | FOS | 14 | - |
| exon-exon | COL3A1 | 2 | + | DYNC1H1 | 14 | - |
| intron-exon | DACH1 | 13 | + | SMAD4 | 18 | + |
| intron-exon | NR2F1-AS1 | 5 | - | LINC01278 | X | - |
| intron-exon | BIN1 | 2 | + | TLE2 | 19 | + |
| exon-exon | PRKD2 | 19 | + | PITX1 | 5 | + |
| exon-intron | AKAP9 | 7 | + | NADK2 | 5 | + |
| intron-exon | USP39 | 2 | + | C2orf68 | 2 | - |
| intron-exon | KLK3 | 19 | - | SZT2 | 1 | + |
| exon-exon | TMEM254 | 10 | - | ND6 | MT | - |
| exon-intron | PRR5-ARHGAP8 | 22 | + | ACLY | 17 | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | SAMD9 | 7 | + | TET2 | 4 | + |
| intron-exon | PARD3 | 10 | - | COL6A3 | 2 | + |
| exon-exon | MRPS35 | 12 | - | CSTA | 3 | + |
| intron-exon | SCAF11 | 12 | + | ZMIZ1 | 10 | + |
| intron-exon | TOGARAM1 | 14 | + | SOCS7 | 17 | - |
| exon-exon | DMXL2 | 15 | - | DMXL2 | 15 | + |
| exon-intron | LOC100129148 | 7 | - | LUC7L2 | 7 | - |
| exon-exon | FYB1 | 5 | - | FYB1 | 5 | + |
| exon-exon | GTF3C1 | 16 | + | MKI67 | 10 | + |
| intron-exon | RFX3 | 9 | + | SON | 21 | + |
| exon-exon | OGA | 10 | + | OGA | 10 | - |
| exon-intron | ATP6V1C2 | 2 | + | PDIA6 | 2 | - |
| exon-exon | CD9 | 12 | + | NOTCH2NLA | 1 | - |
| exon-exon | DSTNP1 | 21 | - | PRMT2 | 21 | - |
| exon-exon | PGA3 | 11 | - | PGA3 | 11 | + |
| exon-exon | DYNC1I2 | 2 | - | HNRNPA2B1 | 7 | + |
| exon-intron | TALAM1 | 11 | - | AC139795.2 | 5 | + |
| exon-exon | ATP2C2 | 16 | - | EIF3A | 10 | + |
| exon-exon | SETDB2-PHF11 | 13 | - | XRN1 | 3 | + |
| exon-exon | ACAA2 | 18 | - | SMG1 | 16 | + |
| exon-intron | CYTB | MT | - | LYRM4-AS1 | 6 | + |
| intron-exon | CASP10 | 2 | + | CGA | 6 | + |
| exon-intron | CNP | 17 | - | IGK | 2 | + |
| exon-exon | RPSAP58 | 19 | - | IL1R1 | 2 | - |
| exon-exon | IL1R1 | 2 | - | IL1R1 | 2 | + |
| exon-intron | RPSAP54 | 13 | + | LOC339874 | 3 | + |
| exon-exon | RPSAP45 | 6 | + | IL1R1 | 2 | + |
| exon-exon | MYL12A | 18 | + | COX1 | MT | + |
| exon-intron | SV2A | 1 | - | DPP8 | 15 | + |
| exon-intron | UBE2H | 7 | - | CARM1 | 19 | + |
| exon-exon | NADSYN1 | 11 | - | OAS2 | 12 | + |
| intron-exon | AUTS2 | 7 | - | EMP2 | 16 | - |
| exon-exon | BRD2 | 6 | - | LOC642846 | 12 | - |
| exon-exon | MAPK8IP3 | 16 | - | ANTXR1 | 2 | + |
| exon-intron | TUT4 | 1 | + | FAM172A | 5 | + |
| intron-exon | RALGPS1 | 9 | + | USP6NL | 10 | - |
| exon-exon | RPS16 | 19 | - | UBD | 6 | - |
| exon-intron | SLC39A7 | 6 | + | PPME1 | 11 | + |
| intron-exon | DTX2P1 | 7 | - | FDPSP2 | 7 | - |
| exon-exon | LOC107984338 | 11 | - | NEAT1 | 11 | + |
| exon-exon | ND6 | MT | + | BEX3 | X | + |
| exon-intron | PIGM | 1 | - | ZBTB7C | 18 | - |
| intron-exon | SARNP | 12 | + | STMP1 | 7 | - |
| exon-exon | SNED1 | 2 | + | MTERF4 | 2 | - |
| exon-intron | BCL2L2-PABPN1 | 14 | - | HIF1A | 14 | + |
| exon-exon | GABARAPL2 | 16 | + | TP63 | 3 | + |
| intron-exon | BLCAP | 20 | + | SRSF1 | 17 | + |
| exon-intron | ENG | 9 | - | INO80E | 16 | + |
| exon-exon | RNA45SN2 | 21 | + | TUBA1B | 12 | + |
| intron-exon | IRF7 | 11 | - | CARS2 | 13 | - |
| exon-intron | ND4 | MT | - | KLF2 | 19 | - |
| exon-exon | FTL | 19 | - | FTL | 19 | + |
| exon-intron | RPL14 | 3 | - | DYNLL2 | 17 | - |
| exon-exon | TUBB4A | 19 | + | FLNA | X | - |
| exon-intron | PTK7 | 6 | - | DLGAP4-AS1 | 20 | - |
| exon-intron | GPR171 | 3 | - | MAGI1 | 3 | - |
| intron-exon | NUTM2A-AS1 | 10 | + | ABCA8 | 17 | + |
| exon-exon | UGT3A2 | 5 | - | HBB | 11 | - |
| exon-exon | NINJ1 | 9 | + | NINJ1 | 9 | - |
| exon-exon | APLP2 | 11 | - | APLP2 | 11 | + |
| exon-intron | SPARCL1 | 4 | + | ZNF713 | 7 | + |
| exon-intron | FAM153CP | 5 | + | AKAP12 | 6 | - |
| intron-exon | NSRP1 | 17 | + | JAK1 | 1 | + |
| exon-exon | ANKHD1-EIF4EBP3 | 5 | + | ANKHD1-EIF4EBP3 | 5 | - |
| exon-exon | HDAC5 | 17 | + | HDAC5 | 17 | - |
| intron-exon | MRPL38 | 17 | + | MRPL38 | 17 | - |
| exon-exon | ND1 | MT | - | PPIG | 2 | + |
| exon-exon | LPAR6 | 13 | - | RTRAF | 14 | - |
| intron-exon | ME3 | 11 | - | TPT1 | 13 | - |
| intron-exon | SFI1 | 22 | + | PISD | 22 | + |
| exon-intron | LOC728743 | 7 | - | LOC107986859 | 7 | - |
| exon-exon | FTL | 19 | - | FTL | 19 | + |
| intron-exon | NDE1 | 16 | + | LRRC26 | 9 | + |
| exon-exon | NDUFB7 | 19 | + | ALDH1B1 | 9 | - |
| intron-exon | CTSA | 20 | + | PLTP | 20 | + |
| exon-exon | BST1 | 4 | - | SLTM | 15 | + |
| exon-intron | ZNF503 | 10 | + | KIAA0895 | 7 | - |
| exon-exon | TSEN54 | 17 | - | C11orf49 | 11 | + |
| intron-exon | DLGAP4-AS1 | 20 | - | MARCKSL1 | 1 | + |
| exon-exon | TRIM47 | 17 | + | RNA45SN1 | 21 | - |
| exon-intron | UNKL | 16 | - | GNPTG | 16 | - |
| intron-exon | RNF40 | 16 | + | RAB7A | 3 | + |
| exon-exon | ZNF8-ERVK3-1 | 19 | + | LOC105372480 | 19 | + |
| exon-exon | MDK | 11 | - | TMED2 | 12 | - |
| exon-exon | TUBB6 | 18 | - | RNA45SN3 | 21 | - |
| exon-intron | RPL39P3 | 6 | - | AKAP6 | | + |
| exon-intron | RPL5 | 1 | + | AP000797.1 | | - |
| exon-exon | AATF | 17 | + | BCLAF1 | 6 | - |
| exon-exon | ND4L | MT | + | ND4 | MT | + |
| exon-intron | UGGT1 | | + | HS6ST1 | 2 | + |
| exon-exon | PTMA | 2 | + | DCAF6 | 1 | + |
| exon-exon | LOC104968399 | 18 | + | MYL12B | 18 | + |
| exon-exon | NARS1 | 18 | + | NARS1 | 18 | - |
| exon-exon | HLA-E | 6 | - | HLA-E | 6 | + |
| exon-intron | RAC1 | 7 | + | SVIL | 10 | + |
| exon-exon | RPL13AP5 | 10 | + | ZNF444 | | + |
| exon-intron | PPIP5K1P1 | 15 | - | CATSPER2 | 15 | - |
| exon-exon | ISCA1 | 9 | + | ISCA1 | 9 | - |
| exon-exon | MAVS | 20 | + | ACBD3 | 1 | - |
| exon-exon | GFM1 | 3 | - | GFM1 | 3 | + |
| exon-exon | HNRNPA3 | 2 | + | POMP | 13 | + |
| intron-exon | LGALS3BP | 17 | + | LGALS3BP | 17 | - |
| exon-exon | MBNL1 | 3 | - | MBNL1 | 3 | + |
| exon-exon | ENC1 | 5 | - | LRBA | 4 | - |
| exon-exon | HMGB1 | 13 | + | HMGB1P6 | | - |
| exon-exon | PTGES3 | 12 | + | PTGES3 | 12 | - |
| exon-exon | RNA45SN2 | 21 | + | NPM1 | 5 | + |
| exon-exon | CYTB | MT | + | ATP6 | MT | + |
| exon-exon | HLA-DPA1 | 6 | - | COX1 | MT | + |
| exon-exon | ND1 | MT | + | ATP6 | MT | + |
| exon-intron | COX1 | MT | + | TRNS1 | MT | + |
| exon-intron | ND4 | MT | + | MYO3A | | - |
| exon-exon | TESK1 | 9 | + | ND2 | MT | + |
| exon-intron | CAPZB | 1 | - | CCBE1 | 18 | + |
| intron-exon | RNR1 | MT | + | COX1 | MT | + |
| exon-exon | ATP8 | MT | + | ND2 | MT | + |
| exon-intron | COX1 | MT | + | ATP8 | MT | + |
| intron-exon | COX2 | MT | + | ABCB7 | X | + |
| exon-exon | TCF3 | 19 | - | NFKBIA | 14 | - |
| exon-intron | ATP6 | MT | + | COX3 | MT | + |
| exon-intron | COX1 | MT | + | TRNS1 | MT | + |
| exon-intron | ND4 | MT | + | WWOX | 16 | - |
| exon-intron | VTI1B | 14 | - | GRIK4 | 11 | - |
| exon-exon | COX1 | MT | + | MIR12136 | 1 | + |
| exon-intron | PVR | 19 | + | GPBP1 | 5 | + |
| exon-intron | CRTAP | 3 | + | FHIT | | - |
| exon-exon | DNMT1 | 19 | - | CYTB | MT | + |
| exon-intron | RPS5 | 19 | + | SWI5 | 9 | - |
| exon-intron | ND4 | MT | + | WWOX | 16 | - |
| exon-exon | LTA4H | 12 | - | S100A11 | 1 | - |
| exon-exon | SLC66A1 | 1 | + | CYTB | MT | + |
| exon-intron | S100A4 | 1 | - | DOCK11 | X | + |
| exon-intron | COX2 | MT | + | ZFAND3 | 6 | - |
| exon-intron | TARBP2 | | + | GMFG | | - |
| intron-exon | SUCLA2 | 13 | - | ND5 | MT | + |
| exon-intron | COX3 | MT | + | NARS1 | 18 | + |
| exon-exon | COX1 | MT | + | LOC102724416 | | - |
| exon-intron | ATP6 | MT | + | MTATP8P1 | 1 | + |
| exon-intron | ND4 | MT | + | ATP6 | MT | + |
| exon-intron | ND5 | MT | + | FAM155A | | + |
| exon-exon | CALR | 19 | + | COX1 | MT | + |
| intron-exon | LRTOMT | 11 | + | LAMTOR1 | 11 | - |
| intron-exon | MTATP6P1 | 1 | + | COX3 | MT | + |
| exon-intron | COX1 | MT | + | TRNS1 | MT | + |
| exon-intron | PRR34-AS1 | 22 | + | CD99P1 | X | - |
| exon-intron | CANX | 5 | + | HPS4 | 22 | + |
| exon-exon | HELZ | 17 | - | P4HB | 17 | - |
| exon-intron | MIR12136 | 1 | + | ARID1A | 1 | - |
| exon-exon | COX1 | MT | + | CYTB | MT | + |
| exon-exon | ND1 | MT | + | SLC25A6 | X | - |
| exon-exon | SPARC | 5 | - | ND3 | MT | + |
| exon-intron | SCAF4 | 21 | - | LOC102723341 | | - |
| exon-exon | ND5 | MT | + | ND4 | MT | + |
| exon-exon | ND4 | MT | + | ATP6 | MT | + |
| exon-exon | COX2 | MT | + | ND2 | MT | + |
| exon-exon | COX1 | MT | + | ND4 | MT | + |
| exon-intron | RPL37 | 5 | - | NLGN4Y | Y | + |
| exon-intron | COX1 | MT | + | TRNS1 | MT | + |
| exon-exon | RTEL1-TNFRSF6B | 20 | - | RTEL1-TNFRSF6B | 20 | + |
| exon-exon | COX2 | MT | + | ND2 | MT | + |
| exon-exon | COL27A1 | 9 | + | IMPDH2 | 3 | - |
| exon-exon | SERPINA1 | 14 | - | ND2 | MT | + |
| exon-exon | COX2 | MT | + | COX1 | MT | + |
| exon-exon | ATP6 | MT | + | ND4 | MT | + |
| exon-exon | CYTB | MT | + | ATP5MC2 | 12 | - |
| exon-exon | RNA45SN1 | 21 | + | ND4 | MT | + |
| exon-intron | ND1 | MT | + | LOC105379841 | | + |
| exon-intron | FAU | 11 | - | GRID2 | 4 | - |
| exon-intron | COX1 | MT | + | TRNS1 | MT | + |
| exon-intron | PLAU | 10 | + | LINC00608 | | + |
| exon-exon | ACTR10 | 14 | + | IPO7 | 11 | + |
| intron-exon | RPS2 | 16 | - | MPLKIP | | - |
| exon-exon | ND5 | MT | + | ND6 | MT | + |
| exon-exon | THUMPD3 | 3 | + | OSMR | 5 | + |
| exon-intron | PSAP | 10 | - | LOC107985141 | | - |
| exon-intron | ND4 | MT | + | LMNTD1 | 12 | + |
| exon-exon | PDIA4 | 7 | - | RPL18 | 19 | - |
| exon-intron | TRAPPC4 | 11 | + | AP1M2 | 19 | - |
| exon-intron | ANGEL2 | 1 | - | AMZ1 | 7 | - |
| exon-intron | UBE2G2 | 21 | - | SMARCD3 | 7 | - |
| exon-exon | CAPN2 | 1 | - | CAPN2 | 1 | + |
| exon-exon | NAP1L1 | 12 | - | ZNF644 | 1 | - |
| intron-exon | TMEM165 | 4 | + | CLOCK | 4 | - |
| exon-intron | CENPX | | - | NXN | 17 | + |
| exon-exon | ND5 | MT | + | ND6 | MT | + |
| exon-exon | GSK3B | 3 | - | CARM1 | 19 | + |
| exon-intron | UBC | 12 | - | GNA12 | 7 | - |
| exon-exon | GTPBP6 | Y | - | CSTF1 | 20 | + |
| exon-intron | GPX1 | 3 | - | FAT3 | 11 | - |
| exon-exon | LOC105373102 | Y | - | SLC25A6 | X | - |
| intron-exon | LOC101929057 | 6 | + | MDN1 | 6 | - |
| intron-exon | UBE3C | 7 | + | BAG1 | 9 | - |
| exon-exon | PDZD3 | | + | LYRM2 | 6 | - |
| intron-exon | KIF1B | 1 | + | SMC4 | 3 | + |
| exon-intron | HOXA2 | | - | MGC27382 | | + |
| exon-intron | KIF18A | | - | LOC102723360 | | + |
| exon-intron | RRM2 | 2 | + | FOXO3B | 17 | + |
| exon-exon | MYL12B | 18 | - | MYL12B | 18 | + |
| intron-exon | DACH1 | 13 | - | WWTR1 | 3 | - |
| exon-exon | TVP23C | 17 | - | CDRT4 | 17 | - |
| exon-exon | RNA45SN1 | 21 | + | MRTFA | 22 | - |
| exon-exon | ACSBG1 | 15 | - | IDH3A | 15 | + |
| exon-exon | PPIL4 | 6 | + | PPIL4 | 6 | - |
| intron-exon | DTX2P1-UPK3BP1-PMS2P11 | 7 | + | PAFAH1B2 | 11 | + |
| intron-exon | RAB3GAP2 | 1 | + | MORF4L1P1 | 1 | + |
| exon-intron | KDM7A | | - | RAD52 | 12 | + |
| intron-exon | ERAP1 | 5 | - | ERAP2 | 5 | + |
| exon-intron | TUBA1A | 12 | - | EDA | X | - |
| intron-exon | AC084337.2 | | - | LOC644169 | | - |
| exon-exon | SCARB2 | 4 | - | LAMP2 | X | - |
| exon-exon | CCN2 | 6 | + | CCN2 | 6 | - |
| intron-exon | CIBAR1 | 8 | - | CPSF2 | 14 | + |
| exon-intron | MLLT6 | 17 | + | GPHN | 14 | + |
| exon-exon | COX1 | MT | + | CBX1 | 17 | - |
| exon-exon | POLR2C | | + | COX3 | MT | + |
| exon-exon | RPS12 | 6 | - | ATP6 | MT | + |
| exon-exon | CRACD | 4 | - | CRACD | 4 | + |
| exon-intron | ADO | 10 | - | AC067751.1 | | - |
| exon-exon | CAMSAP2 | 1 | + | PTMA | 2 | + |
| exon-intron | CDC42P6 | 4 | - | GBA3 | 4 | - |
| exon-exon | TCP1 | 6 | + | TCP1 | 6 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | HNRNPA0 | 5 | - | FTH1 | 11 | - |
| exon-exon | COX1 | MT | + | GNAS | 20 | + |
| exon-exon | RIF1 | 2 | - | RIF1 | 2 | + |
| exon-intron | SSBP1 | 7 | + | TAS2R6P | | + |
| exon-exon | FRMD6 | 14 | - | FRMD6 | | + |
| exon-exon | CDK6 | 7 | + | CDK6 | 7 | - |
| exon-exon | GPAA1 | 8 | + | PNPO | 17 | - |
| exon-exon | KIF1B | 1 | + | PGD | 1 | + |
| exon-exon | MSL1 | 17 | + | PPP3CA | 4 | - |
| exon-exon | ETV1 | 7 | + | ETV1 | 7 | - |
| exon-exon | ATP13A3 | 3 | + | ATP13A3 | 3 | - |
| exon-exon | LINC01366 | 5 | + | HNRNPA0 | 5 | - |
| exon-intron | F11-AS1 | 4 | - | ZDHHC16 | 10 | + |
| exon-intron | PFDN5 | 12 | + | ASCC1 | 10 | + |
| intron-exon | SRP19 | 5 | + | REEP5 | 5 | - |
| exon-exon | KPNB1 | 17 | - | KPNB1 | 17 | + |
| exon-exon | TUBA1C | 12 | - | ND2 | MT | + |
| exon-intron | WHAMM | | + | RAB1A | 2 | + |
| exon-exon | LHFPL3-AS1 | 7 | - | LOC105375436 | | - |
| exon-intron | RAB13 | 1 | - | MTATP6P1 | 1 | + |
| exon-intron | RPS5 | 19 | + | IL10RB | 21 | + |
| exon-exon | ATP6 | MT | - | PSMC4 | 19 | + |
| exon-intron | ND4L | MT | + | ND4 | MT | + |
| exon-intron | GPI | 19 | - | TM2D1 | 1 | - |
| exon-exon | ND2 | MT | + | ATP8 | MT | + |
| exon-exon | GAPDH | 12 | - | RPS16 | 19 | - |
| exon-exon | ATP6 | MT | + | LIMK2 | 22 | + |
| exon-intron | RPS16 | 19 | - | EIF4ENIF1 | 22 | + |
| exon-exon | COX1 | MT | + | MIR12136 | 1 | + |
| exon-exon | COX1 | MT | + | DEAF1 | 11 | - |
| exon-exon | IRS2 | 13 | - | ND4L | MT | + |
| exon-intron | CDC42P6 | 4 | - | GBA3 | 4 | - |
| exon-exon | HMGA1 | 6 | + | H19 | 11 | - |
| intron-exon | LOC105372411 | 19 | - | ZNF428 | 19 | - |
| exon-intron | RPL21P119 | | - | NXN | 17 | + |
| exon-exon | DDX11 | 12 | - | RPL17 | 18 | - |
| exon-exon | RNU6-5P | 2 | - | UBA2 | 19 | + |
| intron-exon | AC007318.2 | 2 | + | VDAC2P5 | | + |
| exon-intron | LSM5 | | + | GPBP1 | 5 | + |
| exon-exon | ARL6IP1 | 16 | + | CDT1 | | + |
| exon-exon | MAGED1 | X | + | FAM234A | 16 | + |
| exon-exon | RPS16 | 19 | + | FBL | 19 | - |
| exon-intron | RPLP2 | 11 | + | BMERB1 | 16 | - |
| exon-exon | HLA-E | 6 | + | MALL | 2 | - |
| exon-exon | KRT8 | 12 | - | KRT3 | | - |
| exon-intron | SFN | 1 | + | LOC105375451 | | + |
| exon-intron | TMEM160 | | - | PCBP1-AS1 | 2 | + |
| intron-exon | ZYG11B | 1 | + | RPL38 | 17 | + |
| exon-exon | DNPEP | 2 | - | ND1 | MT | + |
| exon-exon | RPL36AL | 14 | + | ELOB | | - |
| exon-exon | RPS16 | 19 | + | NOL7 | 6 | + |
| exon-exon | HSBP1L1 | | - | TRMT5 | | - |
| exon-exon | FJX1 | 11 | - | WTIP | 19 | + |
| exon-intron | PSMA7 | 20 | - | MLLT3 | 9 | + |
| exon-exon | TUBA1C | 12 | - | VPS39 | 15 | - |
| exon-intron | FTH1 | 11 | - | SCHLAP1 | 2 | - |
| exon-exon | MED28 | 4 | + | GINS2 | 16 | - |
| exon-intron | RPL9P8 | 15 | - | UBE2Q2P2 | 15 | - |
| exon-exon | MYADM | 19 | - | DKK3 | 11 | - |
| exon-exon | SRC | 20 | + | PSMB2 | 1 | - |
| exon-intron | RPL37 | 5 | - | LOC105373182 | X | + |
| exon-exon | TOMM40 | 19 | + | BCAP29 | 7 | + |
| exon-exon | EIF4A2 | 3 | - | EIF4G1 | 3 | + |
| exon-exon | SLC45A1 | 1 | + | EIF3K | 19 | + |
| exon-intron | RPL8 | 8 | - | RPS13 | 11 | - |
| exon-exon | RPS29 | 14 | + | RPS18P5 | 3 | - |
| exon-intron | CAPZB | 1 | + | LINC01638 | 22 | + |
| exon-exon | TENT4B | 16 | - | BAZ2A | 12 | + |
| intron-exon | SORL1 | 11 | - | NOL8 | 9 | - |
| exon-exon | DNAAF4-CCPG1 | 15 | - | DNAJB11 | 3 | + |
| exon-exon | RNA45SN2 | 21 | - | PIK3R4 | 3 | - |
| exon-exon | EID1 | 15 | + | RANGAP1 | 22 | - |
| exon-exon | MYH9 | 22 | + | MYH9 | 22 | - |
| intron-exon | TXLNGY | Y | - | HNRNPC | 14 | - |
| exon-exon | ADGRE5 | 19 | - | SDC3 | 1 | + |
| exon-exon | TNRC18 | 7 | - | HMGN3 | 6 | - |
| exon-exon | CAVIN1 | 17 | + | CAVIN1 | 17 | - |
| exon-exon | SLC35E1 | 19 | - | RNA45SN3 | 21 | + |
| exon-intron | NONOP1 | 16 | - | SNRNP27 | 2 | - |
| intron-exon | RNR1 | MT | - | UBA1 | X | + |
| exon-exon | RBBP8 | 18 | - | HNRNPA3 | 2 | - |
| exon-exon | CUL4A | 13 | - | CUL4A | 13 | + |
| exon-exon | RNA45SN1 | 21 | - | NOTCH2 | 1 | - |
| intron-exon | RAB27A | 15 | + | SMPDL3A | 6 | - |
| exon-exon | COX3 | MT | - | COX3 | MT | + |
| exon-exon | RAB3GAP2 | 1 | + | RAB3GAP2 | 1 | - |
| intron-exon | RBBP4 | 1 | - | NEAT1 | 11 | + |
| exon-exon | CXADR | 21 | + | ARNT | 1 | + |
| exon-exon | MTMR2 | 11 | + | MTMR2 | 11 | - |
| exon-intron | UBN2 | 7 | - | RBFOX2 | 22 | - |
| exon-exon | SP140 | 2 | - | REPS1 | 6 | - |
| exon-exon | CCDC51 | 3 | - | CCND1 | 11 | - |
| exon-exon | RNA45SN2 | 21 | - | RNA45SN2 | 21 | + |
| intron-exon | PREX1 | 20 | + | CAMK2N1 | 1 | - |
| exon-exon | C1QTNF6 | 22 | - | IL2RB | 22 | - |
| exon-exon | CLSTN1 | 1 | + | RNA45SN1 | 21 | - |
| exon-exon | EZH2 | 7 | - | BCAS2 | 1 | + |
| exon-exon | RNA45SN2 | 21 | + | BPIFB1 | 20 | + |
| exon-intron | COX1 | MT | + | MEF2A | 15 | + |
| exon-intron | HSPG2 | 1 | + | HSPG2 | 1 | - |
| exon-intron | PCBP2 | 12 | + | GSE1 | 16 | + |
| intron-exon | MBOAT1 | 6 | + | USP33 | 1 | + |
| exon-exon | COX5A | 15 | + | COX5A | 15 | - |
| exon-intron | FNBP1L | 1 | + | PTPRN2 | 7 | + |
| exon-exon | YES1 | 18 | - | KDELR2 | 7 | - |
| exon-intron | VIRMA | 8 | - | THADA | 2 | - |
| intron-exon | LINC00476 | 9 | - | RAD51AP1 | 12 | + |
| exon-intron | COX3 | MT | + | TSPYL2 | X | + |
| intron-exon | WDR60 | 7 | - | MYH9 | 22 | - |
| exon-exon | IFT46 | 11 | - | SLC31A1 | 9 | + |
| exon-intron | BCKDHB | 6 | + | BCKDHB | 6 | - |
| intron-exon | NAALADL2 | 3 | - | CAMK2N1 | 1 | + |
| intron-exon | LOC105369438 | 11 | - | LGR4 | 11 | + |
| intron-exon | PDE3A | 12 | - | IGFBP7 | 4 | - |
| exon-intron | PRPF4 | 9 | + | ZNF254 | 19 | + |
| exon-intron | COL1A2 | 7 | + | C1orf159 | 1 | - |
| exon-intron | IGHA1 | 14 | - | EIF4G3 | 1 | + |
| intron-exon | ARHGEF3 | 3 | + | SPTBN1 | 2 | + |
| exon-exon | UBE2O | 17 | + | UBE2O | 17 | - |
| exon-exon | ATP6 | MT | + | SETD2 | 3 | + |
| intron-exon | FNBP1 | 9 | + | CKB | 14 | + |
| exon-exon | SPARC | 5 | - | ALDOA | 16 | + |
| exon-exon | PSG7 | 19 | + | PSG11 | 19 | - |
| exon-exon | RNA45SN1 | 21 | - | RNA45SN2 | 21 | + |
| intron-exon | PCGF3 | 4 | + | NEAT1 | 11 | + |
| intron-exon | PRKCH | 14 | + | PMPCB | 7 | - |
| intron-exon | CD200 | 3 | + | FAM13A | 4 | - |
| exon-exon | CYP2J2 | 1 | - | ARHGAP21 | 10 | + |
| exon-exon | MAP4K4 | 2 | + | ASH1L | 1 | + |
| exon-exon | COX1 | MT | - | PTMAP5 | 13 | + |
| intron-exon | TRIM62 | 1 | - | RNA45SN1 | 21 | - |
| exon-exon | LAMP2 | X | + | ZNF134 | 19 | + |
| intron-exon | DGKH | 13 | - | SAFB2 | 19 | + |
| exon-exon | ASH2L | 8 | + | BCORL1 | X | + |
| exon-exon | SERPINB6 | 6 | - | CSH2 | 17 | - |
| exon-exon | COL3A1 | 2 | - | NUP50 | 22 | + |
| exon-exon | ANKRD10 | 13 | + | DAB2 | 5 | - |
| exon-exon | KRBOX1-AS1 | 3 | + | MED13 | 17 | - |
| intron-exon | IQGAP2 | 5 | + | MALAT1 | 11 | + |
| exon-intron | ATP6 | MT | - | KRT23 | 17 | - |
| exon-exon | LOC653513 | 1 | + | LOC154937 | 7 | + |
| exon-exon | COLEC12 | 18 | + | COLEC12 | 18 | - |
| exon-exon | RNA45SN2 | 21 | - | PSG3 | 19 | - |
| exon-exon | FBLN1 | 22 | - | FBLN1 | 22 | + |
| exon-exon | FUBP3 | 9 | - | FUBP3 | 9 | + |
| exon-exon | NEAT1 | 11 | - | PPP6R2 | 22 | - |
| exon-intron | CSH1 | 17 | - | PLPP3 | 1 | - |
| intron-exon | RMND1 | 6 | + | CSH1 | 17 | + |
| exon-intron | SRRM2 | 16 | + | LOC112268284 | 21 | - |
| intron-exon | MED12L | 3 | + | MTCH1 | 6 | - |
| exon-exon | AKAP10 | 17 | - | AKAP10 | 17 | + |
| exon-exon | LOC105373233 | 1 | - | KMO | 1 | - |
| exon-exon | ND4 | MT | + | ND1 | MT | + |
| intron-exon | ARGLU1 | 13 | - | NAPG | 18 | + |
| exon-intron | CSH1 | 17 | - | FTX | X | - |
| exon-intron | BRPF3 | 6 | - | N4BP2L2 | 13 | - |
| exon-intron | MYL6 | 12 | - | IKZF2 | 2 | - |
| exon-exon | SYNE2 | 14 | - | SYNE2 | 14 | + |
| intron-exon | ATXN2 | 12 | + | ND1 | MT | + |
| exon-intron | POLR2A | 17 | - | ANKRD28 | 3 | - |
| intron-exon | KCNMA1 | 10 | - | PSG1 | 19 | + |
| intron-exon | LOC112469008 | 16 | - | COQ9 | 16 | - |
| exon-intron | HIVEP2 | 6 | + | LOC107985349 | 19 | + |
| intron-exon | BCL7B | 7 | + | FBLIM1 | 1 | - |
| intron-exon | SSBP3 | 1 | - | RNA45SN2 | 21 | - |
| intron-exon | PHYHIPL | 10 | - | CCND1 | 11 | - |
| intron-exon | ISM1 | 20 | + | UGGT1 | 2 | - |
| intron-exon | CAV1 | 7 | - | IQGAP2 | 5 | - |
| intron-exon | KATNBL1 | 15 | + | CETN3 | 5 | + |
| intron-exon | PLPP3 | 1 | - | CALM3 | 19 | + |
| exon-intron | KCNMA1 | 10 | - | DCC | 18 | + |
| intron-exon | FBLN7 | 2 | - | ANXA1 | 9 | - |
| exon-intron | PSG4 | 19 | + | ADAR | 1 | - |
| exon-intron | CHSY1 | 15 | - | PDE4B | 1 | - |
| intron-exon | ZFAT | 8 | + | ND5 | MT | + |
| exon-exon | PRKCI | 3 | + | PLK3 | 1 | - |
| intron-exon | MOB3B | 9 | - | MLEC | 12 | - |
| exon-intron | SSRP1 | 11 | + | TACC1 | 8 | - |
| exon-exon | RAI14 | 5 | - | LAPTM4A | 2 | - |
| exon-intron | MAN1B1 | 9 | + | TSC1 | 9 | + |
| exon-intron | HSP90B1 | 12 | - | NEDD4L | 18 | + |
| intron-exon | PSG10P | 19 | + | PSG1 | 19 | + |
| exon-intron | ERC1 | 12 | - | PRKDC | 8 | - |
| exon-exon | TNRC6A | 16 | + | PPP2R5C | 14 | - |
| exon-exon | FBLN1 | 22 | - | FBLN1 | 22 | + |
| exon-exon | C9orf85 | 9 | - | ARHGAP10 | 4 | + |
| exon-exon | CLSPN | 1 | + | CLSPN | 1 | - |
| intron-exon | UBR7 | 14 | - | TEP1 | 14 | - |
| intron-exon | LOC105376434 | 10 | + | CYTB | MT | - |
| exon-exon | ND1 | MT | - | GNAS | 20 | - |
| exon-intron | ANKRD17 | 4 | + | CDK13 | 7 | - |
| intron-exon | MTND2P28 | 1 | + | ND2 | MT | + |
| exon-exon | SMIM15 | 5 | - | SMIM15 | 5 | + |
| exon-exon | NCSTN | 1 | - | ND4 | MT | - |
| exon-exon | ND4 | MT | - | ND4 | MT | + |
| exon-exon | SET | 9 | + | SUSD6 | 14 | - |
| intron-exon | RSRP1 | 1 | - | GNAS | 20 | + |
| exon-exon | GPN1 | 2 | + | GPN1 | 2 | - |
| exon-exon | CNOT1 | 16 | + | ENTPD4 | 8 | + |
| exon-intron | RPL5 | 1 | + | DIPK1A | 1 | - |
| exon-exon | CCDC12 | 3 | - | SART3 | 12 | - |
| exon-exon | SART3 | 12 | + | SART3 | 12 | - |
| intron-exon | PPP6R2 | 22 | - | INTS3 | 1 | - |
| exon-exon | IVNS1ABP | 1 | - | ZC3H13 | 13 | - |
| exon-exon | SVIL | 10 | + | PEAK1 | 15 | + |
| exon-exon | STX3 | 11 | - | MEPCE | 7 | + |
| exon-exon | MICAL1 | 6 | - | KRT16 | 17 | + |
| exon-exon | MICAL1 | 6 | - | KRT16 | 17 | + |
| exon-exon | RANBP10 | 16 | - | SRRM2 | 16 | - |
| intron-exon | IFT140 | 16 | - | KRT5 | 12 | - |
| exon-intron | MALAT1 | 11 | + | ABL1 | 9 | + |
| exon-exon | TGOLN2 | 2 | - | TGOLN2 | 2 | + |
| exon-intron | PABPC1 | 8 | + | KCNIP4 | 4 | + |
| exon-exon | CLPTM1 | 19 | + | RPL13 | 16 | + |
| exon-exon | RNA45SN1 | 21 | - | RNA45SN3 | 21 | + |
| exon-intron | PRH2 | 12 | + | PRH1-PRR4 | 12 | - |
| exon-intron | ZNF638 | 2 | + | CUX1 | 7 | - |
| intron-exon | DOCK10 | 2 | + | TCAIM | 3 | + |
| intron-exon | ZNF589 | 3 | + | PLP2 | X | + |
| intron-exon | ZNF445 | 3 | - | BRD2 | 6 | - |
| exon-exon | REPS1 | 6 | - | ZNF669 | 1 | + |
| exon-intron | GPATCH8 | 17 | - | ZNF609 | 15 | - |
| intron-exon | TOMM40L | 1 | - | ARPC1A | 7 | + |
| exon-intron | PNN | 14 | - | SLTM | 15 | + |
| exon-exon | AFF4 | 5 | - | ZNF33A | 10 | - |
| exon-exon | FTH1 | 11 | + | FTH1 | 11 | - |
| exon-exon | EIF4A2 | 3 | + | EIF4A2 | 3 | - |
| exon-intron | NCOR1 | 17 | + | MAD1L1 | 7 | + |
| intron-exon | CENPW | 6 | - | DPF2 | 11 | + |
| exon-exon | ANKRD17 | 4 | + | ANKRD17 | 4 | - |
| exon-exon | AHNAK | 11 | - | NELFCD | 20 | + |
| exon-intron | RNA45SN2 | 21 | - | IGH | 14 | + |
| exon-exon | PDIA6 | 2 | + | PDIA6 | 2 | - |
| exon-exon | LYZ | 12 | + | LYZ | 12 | - |
| intron-exon | DUSP5 | 10 | + | S100A6 | 1 | - |
| intron-exon | LOC105377663 | 4 | - | EXOC1 | 4 | - |
| exon-intron | PTPN6 | 12 | + | EMC3-AS1 | 3 | + |
| exon-intron | RNA45SN1 | 21 | - | MX2 | 21 | - |
| intron-exon | HNRNPK | 9 | + | MGAT1 | 5 | + |
| exon-exon | ARGLU1 | 13 | - | NACA | 12 | - |
| intron-exon | CHCHD3 | 7 | - | HLA-E | 6 | + |
| exon-exon | IK | 5 | + | RAB11FIP1 | 8 | + |
| exon-exon | EEF1A1P25 | 3 | + | TPT1 | 13 | + |
| exon-exon | ADIPOR2 | 12 | - | TMEM248 | 7 | + |
| intron-exon | CCDC148 | 2 | + | GUCY1B1 | 4 | + |
| exon-exon | COX3 | MT | + | ZNF609 | 15 | + |
| intron-exon | ALK | 2 | + | ASRGL1 | 11 | - |
| exon-exon | ZBTB20 | 3 | + | ZBTB20 | 3 | - |
| exon-exon | KDM1A | 1 | + | KDM1A | 1 | - |
| exon-intron | MICAL3 | 22 | - | SLC1A3 | 5 | - |
| exon-intron | CD93 | 20 | + | SYAP1 | X | + |
| exon-intron | TALAM1 | 11 | - | KCNMA1 | 10 | + |
| exon-exon | F3 | 1 | - | TMTC2 | 12 | - |
| exon-exon | RPS14 | 5 | - | CYTB | MT | - |
| intron-exon | YARS1 | 1 | - | GDF11 | 12 | - |
| intron-exon | LOC102724843 | 21 | + | ND4 | MT | - |
| exon-exon | CERS5 | 12 | + | CERS5 | 12 | - |
| intron-exon | CLIC5 | 6 | + | ND4 | MT | + |
| exon-intron | COX3 | MT | - | AL136418.1 | 14 | + |
| exon-intron | ATP13A3 | 3 | + | SLC23A1 | 5 | - |
| exon-exon | ATRX | X | + | ATRX | X | - |
| intron-exon | SOD2 | 6 | + | VPS50 | 7 | + |
| exon-intron | EPCAM | 2 | + | CFLAR | 2 | + |
| exon-intron | SRRM2 | 16 | - | OXNAD1 | 3 | + |
| exon-exon | RNA45SN2 | 21 | + | TBC1D25 | X | - |
| exon-exon | CYB5R1 | 1 | + | CYB5R1 | 1 | - |
| exon-exon | MAPK3 | 16 | - | PMPCA | 9 | + |
| exon-intron | SMYD5 | 2 | + | RREB1 | 6 | + |
| exon-exon | ND1 | MT | + | KLHL7 | 7 | - |
| exon-exon | DPP9 | 19 | + | DPP9 | 19 | - |
| exon-intron | TIMP2 | 17 | - | AUTS2 | 7 | + |
| exon-exon | DDX3Y | Y | + | DEPDC5 | 22 | - |
| exon-exon | TUBA1C | 12 | + | TUBA1B | 12 | - |
| intron-exon | ARFGEF2 | 20 | + | NACA | 12 | + |
| exon-exon | SPTBN1 | 2 | - | SPEN | 1 | + |
| exon-exon | FBXO11 | 2 | + | COX1 | MT | + |
| exon-intron | HLA-DRA | 6 | + | MON2 | 12 | + |
| intron-exon | ZNF516 | 18 | - | RPS8 | 1 | - |
| exon-exon | RNA45SN2 | 21 | + | GATA4 | 8 | + |
| exon-intron | GANAB | 11 | + | NSMAF | 8 | - |
| exon-intron | COX3 | MT | - | STK38L | 12 | - |
| exon-exon | GSN | 9 | + | CSNK1D | 17 | - |
| exon-intron | CD99 | Y | + | ATP6 | MT | + |
| exon-exon | KAT6B | 10 | + | SDF4 | 1 | + |
| intron-exon | LOC101927521 | 18 | - | PLD3 | 19 | - |
| exon-intron | APLP2 | 11 | + | STAT4 | 2 | - |
| exon-exon | TNPO2 | 19 | + | ND5 | MT | - |
| intron-exon | PRKCSH | 19 | + | PRKCSH | 19 | - |
| exon-intron | AP2A2 | 11 | + | H3C9P | 6 | + |
| exon-exon | SPPL2B | 19 | - | SUGP1 | 19 | + |
| exon-exon | TRIM28 | 19 | - | NUCB1 | 19 | - |
| intron-exon | POTEM | 14 | - | ADCY5 | 3 | + |
| intron-exon | IGH | 14 | + | FUS | 16 | + |
| exon-exon | FKBP10 | 17 | - | FKBP10 | 17 | + |
| exon-exon | RPL19 | 17 | - | RPL19 | 17 | + |
| exon-exon | ABTB2 | 11 | + | LOC102723539 | 11 | + |
| exon-exon | FKBP10 | 17 | - | FKBP10 | 17 | + |
| exon-exon | YWHAE | 17 | + | VWF | 12 | - |
| intron-exon | CLEC12B | 12 | - | ANKRD12 | 18 | + |
| exon-exon | SPPL2B | 19 | - | SPPL2B | 19 | + |
| exon-exon | TAOK1 | 17 | - | TAOK1 | 17 | + |
| exon-intron | PDE2A | 11 | - | KIAA1841 | 2 | + |
| exon-exon | SYNC | 1 | - | RBBP4 | 1 | - |
| intron-exon | NPAS2-AS1 | 2 | - | NPAS2 | 2 | - |
| exon-exon | FASTKD1 | 2 | - | ND6 | MT | - |
| exon-intron | RETREG3 | 17 | - | IDUA | 4 | - |
| exon-exon | SLC6A16 | 19 | + | CD37 | 19 | + |
| intron-exon | PCNT | 21 | + | HNRNPU | 1 | + |
| exon-exon | CASP2 | 7 | - | ADAR | 1 | + |
| exon-exon | IL13RA1 | X | - | HMBOX1 | 8 | + |
| exon-intron | PTRH2 | 17 | + | BFAR | 16 | + |
| exon-exon | HNRNPC | 14 | - | MLXIP | 12 | - |
| exon-exon | VPS4A | 16 | + | COG8 | 16 | + |
| exon-exon | RNA45SN1 | 21 | + | MPRIP | 17 | + |
| intron-exon | RNR2 | MT | - | MLXIP | 12 | + |
| exon-exon | BTG2 | 1 | - | CLU | 8 | - |
| exon-exon | GSN | 9 | + | GSN | 9 | - |
| exon-exon | B4GALT1 | 9 | + | B4GALT1 | 9 | - |
| exon-exon | IGHG1 | 14 | - | IGHG1 | 14 | + |
| exon-exon | FBXL20 | 17 | + | FBXL20 | 17 | - |
| exon-exon | YME1L1 | 10 | + | BRD8 | 5 | - |
| exon-intron | SRSF4 | 1 | + | FIP1L1 | 4 | - |
| exon-exon | KDELR2 | 7 | - | HAUS5 | 19 | + |
| exon-exon | SFSWAP | 12 | - | SFSWAP | 12 | + |
| exon-exon | PCGF1 | 2 | - | C1S | 12 | - |
| exon-exon | INTS3 | 1 | + | GBF1 | 10 | + |
| exon-exon | GNAS | 20 | + | IGKV1-5 | 2 | - |
| exon-exon | FBXO41 | 2 | + | MICALL2 | 7 | - |
| exon-exon | GUK1 | 1 | + | KDM5C | X | + |
| exon-exon | IGHG2 | 14 | + | IGHG1 | 14 | - |
| intron-exon | LOC107985174 | 1 | + | EXOC5 | 14 | + |
| exon-exon | SRSF6 | 20 | - | SRSF6 | 20 | + |
| exon-exon | PCYOX1 | 2 | - | PCYOX1 | 2 | + |
| exon-intron | ZNF638 | 2 | + | KAZN | 1 | + |
| exon-intron | ARHGAP21 | 10 | - | SPTBN1 | 2 | + |
| exon-exon | IGHG1 | 14 | - | IGHV4-61 | 14 | - |
| intron-exon | LOC107984741 | 15 | - | USP8 | 15 | - |
| exon-intron | FCGRT | 19 | - | ALCAM | 3 | - |
| intron-exon | DENND4B | 1 | + | DENND4B | 1 | - |
| exon-intron | UBE2L3 | 22 | - | STAT1 | 2 | - |
| exon-intron | DNASE1L3 | 3 | + | OASL | 12 | - |
| exon-exon | PPIB | 15 | - | SRSF3 | 6 | + |
| exon-exon | TUBA1B | 12 | - | F8A3 | X | - |
| exon-exon | TNNT1 | 19 | - | TNNT1 | 19 | + |
| exon-exon | WNT5B | 12 | + | VAPA | 18 | + |
| exon-exon | TEX261 | 2 | - | TEX261 | 2 | + |
| exon-intron | SCAMP2 | 15 | - | LINC01591 | | + |
| exon-exon | DMAC2L | 14 | + | TRAPPC8 | 18 | - |
| exon-intron | MYH7 | 14 | - | LOC107986291 | | + |
| exon-intron | NADK2 | 5 | - | LOC105370829 | | + |
| exon-exon | GCG | 2 | - | CPA1 | 7 | + |
| exon-intron | CTRL | 16 | - | TPTE2P5 | 13 | + |
| exon-intron | CPA1 | 7 | + | MICAL3 | 22 | + |
| exon-intron | LDLRAP1 | | + | DTX2P1-UPK3BP1-PMS2P11 | 7 | - |
| intron-exon | AMY2A | 1 | + | AMY1A | 1 | + |
| intron-exon | LOC105372112 | | + | ARPP19 | 15 | - |
| intron-exon | LOC105374524 | 4 | + | PSPH | 7 | - |
| exon-exon | LOC107986178 | 4 | + | LOC105374483 | 4 | + |
| exon-exon | HNRNPA0 | 5 | - | GULP1 | 2 | + |
| exon-intron | VPS4B | 18 | - | KDSR | | - |
| exon-exon | LOC105375026 | 6 | + | SPATA4 | | - |
| exon-intron | HINT1 | 5 | - | MCPH1 | 8 | + |
| exon-intron | SEMG2 | | + | SETD7 | 4 | - |
| intron-exon | TMPRSS2 | 21 | - | MALAT1 | 11 | + |
| exon-exon | HOXD-AS2 | 2 | + | LOC401021 | 2 | + |
| exon-exon | RNA45SN1 | 21 | - | URB1 | 21 | + |
| exon-exon | PTPN18 | 2 | - | GBA2 | 9 | + |
| intron-exon | BX470102.2 | 1 | + | S100A16 | 1 | + |
| intron-exon | ACTN4 | 19 | - | FAT1 | 4 | + |
| intron-exon | MAPK10 | 4 | - | ARHGAP24 | 4 | - |
| exon-exon | H2AZ2 | 7 | + | PABPC1 | 8 | + |
| exon-exon | RAP1GAP2 | 17 | - | TGOLN2 | 2 | + |
| exon-exon | MARK2 | 11 | - | HGS | 17 | - |
| exon-exon | KRT4 | 12 | + | KRT4 | 12 | - |
| intron-exon | AL109627.1 | 1 | + | CPLANE2 | 1 | + |
| exon-exon | LAPTM5 | 1 | + | POR | 7 | - |
| exon-intron | SHROOM3 | 4 | - | SHROOM3-AS1 | 4 | - |
| exon-exon | TBC1D9B | 5 | + | KIF13A | 6 | + |
| exon-exon | YPEL1 | 22 | - | PPIL2 | 22 | - |
| exon-exon | OGA | 10 | - | PCGF1 | 2 | - |
| exon-exon | POLR2H | 3 | - | DTX3L | 3 | - |
| exon-exon | LOC112268423 | 2 | - | RABL2A | 2 | - |
| exon-intron | PLEKHB1 | 11 | - | ETV6 | 12 | - |
| exon-exon | ATF4 | 22 | - | PLAUR | 19 | + |
| exon-exon | RFC1 | 4 | + | TEK | 9 | - |
| exon-intron | KRT18 | 12 | - | LOC102723945 | 16 | - |
| exon-exon | CDC37 | 19 | + | TKT | 3 | + |
| exon-exon | TMEM106C | 12 | - | IFRD2 | 3 | + |
| exon-exon | LOC107985504 | 21 | - | PDE9A | 21 | - |
| exon-exon | TMEM184C | 4 | - | GDE1 | 16 | + |
| exon-intron | PLP2 | X | + | DNAJB4 | 1 | + |
| intron-exon | AC106900.1 | 2 | - | LOC107985961 | 2 | - |
| intron-exon | ZSCAN2 | 15 | + | SCAND2P | 15 | + |
| exon-intron | ND3 | MT | - | MBNL1 | 3 | - |
| exon-intron | RPL37P2 | 11 | + | UBR5 | 8 | + |
| exon-intron | CTNNA1 | 5 | + | MAPK6 | 15 | - |
| exon-intron | SF1 | 11 | - | GXYLT1P5 | | + |
| exon-intron | LOC105373294 | | - | AL022151.1 | | - |
| exon-intron | UQCRQ | 5 | + | ARHGEF12 | 11 | + |
| exon-intron | POLR3K | 16 | + | BLOC1S1-RDH5 | 12 | + |
| exon-intron | UBA1 | X | + | SLC7A2 | 8 | - |
| intron-exon | STAG1 | 3 | - | SLC25A32 | 8 | - |
| intron-exon | TPTE2P2 | 13 | + | TPTE2P3 | | + |
| intron-exon | LOC105373890 | | + | LOC105373891 | | + |
| exon-exon | BOLA2B | 16 | - | SMG1P2 | 16 | - |
| exon-exon | TMSB4X | X | + | PTMAP5 | 13 | + |
| exon-intron | DNAJC9 | 10 | + | DNAJC9-AS1 | 10 | + |
| exon-intron | AKIRIN2 | | - | ORC3 | | - |
| exon-exon | COX1 | MT | + | MIR12136 | 1 | + |
| exon-intron | DBI | 2 | + | AL138720.1 | | + |
| exon-exon | MSL3P1 | | - | SRP9 | 1 | + |
| exon-exon | SLC25A6 | Y | + | SLC25A6 | X | - |
| exon-exon | RNU6-1 | 15 | - | PPP4R1 | 18 | - |
| exon-intron | RPL13AP5 | 10 | - | BX571818.1 | | + |
| exon-exon | ATP6V1C2 | 2 | + | SZRD1 | 1 | + |
| exon-exon | CCND2 | 12 | - | RBMX | X | - |
| exon-exon | PGD | 1 | + | C11orf24 | 11 | - |
| exon-intron | RPS16 | 19 | + | AC005614.1 | | + |
| exon-exon | RPSAP47 | | + | HSPA8 | 11 | - |
| exon-exon | HSD17B4 | 5 | + | COPS3 | 17 | - |
| exon-exon | PA2G4 | 12 | - | MPST | 22 | + |
| exon-exon | FOXC1 | | - | TMTC1 | | - |
| intron-exon | LOC100420798 | | + | LOC105377581 | | - |
| exon-exon | CMC1 | 3 | - | CHMP4B | 20 | + |
| exon-exon | DEK | 6 | + | DEK | 6 | - |
| exon-exon | CNPPD1 | 2 | + | CNPPD1 | 2 | - |
| exon-exon | ANXA5 | 4 | + | ANXA5 | 4 | - |
| exon-exon | SLC25A39 | 17 | + | HOXC4 | 12 | + |
| exon-exon | PTGER2 | | - | EEF1A1P6 | 7 | - |
| exon-exon | CD47 | | + | PFDN5 | 12 | + |
| exon-intron | LMNA | 1 | + | MIDEAS | 14 | - |
| exon-intron | AOPEP | 9 | + | ERBB4 | | - |
| exon-exon | UQCRHL | 1 | - | HGH1 | | + |
| exon-exon | ACTG1 | 17 | - | ACTG1 | 17 | + |
| exon-exon | AP3S1 | 5 | - | ATG12 | 5 | - |
| exon-exon | RASEF | 9 | + | RASEF | 9 | - |
| exon-exon | RNF114 | 20 | - | ACTG1 | 17 | - |
| exon-exon | YBX1 | 1 | - | RALBP1 | 18 | + |
| exon-exon | HNRNPRP1 | 10 | - | RACK1 | 5 | - |
| exon-exon | MLXIP | 12 | - | KRT19 | 17 | - |
| exon-exon | MEST | 7 | + | COPG2 | 7 | + |
| exon-exon | RPS18P12 | 17 | - | NDUFV3 | 21 | + |
| exon-exon | SUPT7L | 2 | + | SUPT7L | 2 | - |
| exon-exon | DPP8 | 15 | - | INTS14 | 15 | - |
| exon-exon | ADNP | 20 | + | TPRG1L | 1 | + |
| exon-intron | ORC4 | 2 | + | MBD5 | 2 | + |
| intron-exon | RPSA | 3 | - | LMBR1 | 7 | - |
| exon-exon | PGM2L1 | 11 | - | CD24 | 6 | - |
| exon-exon | RPL39 | X | - | CFL2 | 14 | - |
| exon-intron | ERO1A | 14 | - | GPR137C | | - |
| exon-exon | TMEM64 | 8 | + | TMEM64 | 8 | - |
| exon-exon | HNRNPUL2-BSCL2 | 11 | + | SENP5 | 3 | - |
| exon-intron | MTFMT | 15 | + | SHQ1 | 3 | + |
| exon-exon | FAXC | 6 | - | GNAS | 20 | + |
| exon-exon | C1QTNF5 | 11 | + | MFRP | 11 | + |
| intron-exon | LOC100507551 | 19 | - | SLC27A1 | 19 | - |
| exon-exon | ERG28 | 14 | + | TRIP12 | 2 | + |
| exon-exon | LINC00466 | 1 | + | RFC2 | 7 | + |
| exon-intron | ATF2 | 2 | + | DGKI | 7 | + |
| intron-exon | ASRGL1 | 11 | - | MYBL2 | 20 | - |
| intron-exon | LOC105373194 | X | - | VAV3 | 1 | + |
| exon-intron | TBXA2R | 19 | + | GIT2 | 12 | + |
| exon-intron | ABHD16A | 6 | + | AGO1 | 1 | - |
| exon-exon | MGRN1 | 16 | - | RNA45SN1 | 21 | - |
| exon-intron | LOC105374802 | 2 | + | ENO1 | 1 | + |
| exon-exon | CALU | 7 | - | GPR19 | 12 | + |
| exon-exon | RPL26 | 17 | + | PRRC2B | 9 | + |
| exon-intron | LOC105375019 | 6 | + | ABCD4 | 14 | + |
| exon-exon | RPS24 | 10 | - | RPS24 | 10 | + |
| exon-exon | C15orf32 | 15 | - | ST8SIA2 | 15 | - |
| intron-exon | OGG1 | 3 | + | GRAMD1C | 3 | - |
| exon-intron | ZSWIM1 | 20 | - | RASEF | 9 | + |
| exon-exon | MICOS10-NBL1 | 1 | - | RPS17 | 15 | - |
| exon-exon | RNA45SN2 | 21 | - | MED26 | 19 | - |
| exon-exon | PPP2CB | 8 | + | PCYT2 | 17 | - |
| exon-exon | SOX4 | 6 | - | SOX4 | 6 | + |
| exon-intron | IDS | X | + | PUM2 | 2 | + |
| exon-exon | ABRAXAS1 | 4 | - | MRPS18C | 4 | - |
| exon-exon | REX1BD | 19 | - | NR4A2 | 2 | + |
| exon-exon | FANCA | 16 | - | ZNF276 | 16 | - |
| exon-exon | ARL10 | 5 | - | ARL10 | 5 | + |
| exon-exon | LINC00893 | X | + | EOLA1 | X | + |
| exon-exon | LINC00683 | 18 | - | LINC00908 | 18 | - |
| exon-exon | TG | 8 | - | TG | 8 | + |
| intron-exon | TRND | MT | - | COX1 | MT | - |
| exon-exon | IP6K2 | 3 | - | IP6K2 | 3 | + |
| exon-exon | DNAH7 | 2 | - | SLC39A10 | 2 | - |
| exon-exon | SREK1IP1 | 5 | + | SERBP1 | 1 | + |
| exon-exon | LINC02219 | 5 | - | ROCK2 | 2 | + |
| exon-exon | CACNG7 | 19 | - | TTYH1 | 19 | - |
| exon-intron | DNAJC2 | 7 | + | PSMC2 | 7 | + |
| exon-exon | TMEM230 | 20 | + | TCP1 | 6 | + |
| intron-exon | FAM230G | 22 | + | USP41 | 22 | + |
| exon-exon | SIRPA | 20 | - | HNRNPUL2-BSCL2 | 11 | + |
| exon-intron | IRF8 | 16 | - | HOXB-AS3 | 17 | + |
| intron-exon | SERHL | 22 | + | RANBP9 | 6 | + |
| intron-exon | HOXB6 | 17 | - | HOXB-AS3 | 17 | - |
| exon-exon | BCAT2 | 19 | + | ZNF76 | 6 | - |
| exon-intron | COL1A1 | 17 | + | MARCHF6 | 5 | - |
| exon-exon | SPDYE2 | 7 | + | SPDYE2B | 7 | + |
| exon-intron | HMGB2 | 4 | + | CAMK1D | 10 | - |
| exon-exon | FLJ42627 | 16 | - | LOC652276 | 16 | - |
| intron-exon | C5orf66 | 5 | + | CLTC | 17 | - |
| exon-intron | LMF2 | 22 | + | CTRL | 16 | - |
| exon-exon | MRPL14 | 6 | + | ZBTB42 | 14 | - |
| exon-intron | HSPD1P4 | 12 | - | LOC107984671 | 14 | - |
| intron-exon | THSD4 | 15 | + | PANK1 | 10 | + |
| intron-exon | LOC107986289 | 4 | - | ITGAV | 2 | - |
| exon-exon | LOC105373581 | 2 | - | STEAP3 | 2 | - |
| exon-exon | TMEM91 | 19 | - | RNA45SN3 | 21 | - |
| intron-exon | RNF214 | 11 | - | PAFAH1B2 | 11 | - |
| exon-intron | DMBT1 | 10 | - | SND1 | 7 | + |
| exon-exon | CIR1 | 2 | + | FIP1L1 | 4 | - |
| exon-intron | ZNRF1 | 16 | - | LOC101927741 | 2 | - |
| exon-intron | HTATSF1P2 | 6 | - | PSMD12 | 17 | + |
| exon-intron | C1QTNF1 | 17 | - | AFF1 | 4 | - |
| exon-exon | ATP6 | MT | + | ND5 | MT | + |
| exon-exon | SPTAN1 | 9 | - | SPTAN1 | 9 | + |
| exon-exon | SPP1 | 4 | - | SPP1 | 4 | + |
| exon-intron | ACIN1 | 14 | + | ACIN1 | 14 | - |
| exon-exon | DST | 6 | + | PSMD2 | 3 | - |
| exon-exon | MMP7 | 11 | + | MMP7 | 11 | - |
| exon-exon | UBQLN2 | X | - | UBQLN2 | X | + |
| exon-exon | ND1 | MT | - | FARSA | 19 | + |
| exon-exon | PPP3CB | 10 | - | ODC1 | 2 | - |
| intron-exon | ZNF701 | 19 | + | SAFB | 19 | - |
| exon-exon | ACOT9 | X | + | RHOF | 12 | - |
| exon-exon | SREBF2 | 22 | - | SREBF2 | 22 | + |
| exon-exon | MYH9 | 22 | + | MYH9 | 22 | - |
| exon-intron | ND6 | MT | - | SRGAP2 | 1 | + |
| exon-exon | TAGLN | 11 | + | COPG2 | 7 | + |
| exon-exon | SND1 | 7 | + | SPTBN1 | 2 | + |
| exon-exon | RPS20P11 | 2 | + | PDPR | 16 | + |
| intron-exon | AL117339.5 | 10 | + | PRKAA1 | 5 | - |
| exon-exon | CAPNS1 | 19 | + | KLC1 | 14 | + |
| intron-exon | DHRSX | Y | + | TPR | 1 | + |
| exon-exon | ACTG1 | 17 | + | ACTG1 | 17 | - |
| exon-exon | VCP | 9 | - | HNRNPA2B1 | 7 | - |
| exon-exon | HAX1 | 1 | - | HAX1 | 1 | + |
| exon-exon | CIR1 | 2 | - | SEC63 | 6 | - |
| exon-exon | KRT86 | 12 | + | KRT83 | 12 | + |
| exon-intron | RNA45SN2 | 21 | - | DOCK5 | 8 | - |
| exon-exon | NUP214 | 9 | - | NUP214 | 9 | + |
| exon-exon | UBA52 | 19 | - | SPTAN1 | 9 | + |
| intron-exon | USP34 | 2 | - | RAB2B | 14 | - |
| intron-exon | LOC105374040 | 3 | - | TMEM138 | 11 | - |
| intron-exon | DNMT3A | 2 | + | NUMA1 | 11 | - |
| exon-exon | RNA45SN1 | 21 | + | NACA | 12 | - |
| exon-intron | COX3 | MT | - | STEAP3 | 2 | + |
| exon-exon | TOMM34 | 20 | + | STX3 | 11 | + |
| exon-intron | ATP9A | 20 | + | B3GALNT2 | 1 | - |
| exon-exon | JPT2 | 16 | + | FMR1 | X | - |
| exon-exon | ARMCX3 | X | - | RNA45SN1 | 21 | + |
| exon-intron | TUBA1B | 12 | + | EBF2 | 8 | + |
| intron-exon | ATP5MF-PTCD1 | 7 | + | UCA1 | 19 | + |
| exon-intron | GMFB | 14 | + | ADGRG7 | 3 | + |
| exon-intron | ND4 | MT | - | AUTS2 | 7 | + |
| exon-intron | CUTALP | 9 | - | MARK3 | 14 | - |
| exon-intron | TPM4 | 19 | + | TBL1XR1 | 3 | - |
| intron-exon | IQCJ-SCHIP1 | 3 | - | CD55 | 1 | - |
| intron-exon | WASF2 | 1 | - | TNRC18 | 7 | + |
| exon-exon | MTSS2 | 16 | + | ATP8 | MT | + |
| intron-exon | RP11-120D5.1 | X | - | MPHOSPH8 | 13 | + |
| exon-exon | HLA-B | 6 | + | HLA-B | 6 | - |
| exon-exon | TRIM25 | 17 | - | CXXC1 | 18 | + |
| intron-exon | LOC100506302 | 7 | + | PRR12 | 19 | + |
| exon-intron | FNDC3A | 13 | - | DPY19L2P1 | 7 | - |
| intron-exon | TMEM164 | X | - | HSP90AB1 | 6 | - |
| exon-exon | MUC3A | 7 | + | SETP22 | 5 | - |
| intron-exon | CUL3 | 2 | + | RPL22 | 1 | + |
| exon-intron | TMEM189-UBE2V1 | 20 | + | AXIN2 | 17 | + |
| exon-exon | KCTD5 | 16 | - | MYH11 | 16 | - |
| exon-intron | ND4 | MT | + | VDR | 12 | + |
| exon-intron | EMP3 | 19 | - | BAZ2B | 2 | + |
| exon-intron | ELK4 | 1 | - | LRMDA | 10 | - |
| intron-exon | SSH2 | 17 | - | VCP | 9 | - |
| exon-exon | MALAT1 | 11 | + | TALAM1 | 11 | - |
| exon-exon | LOC112268284 | 21 | - | ACTB | 7 | + |
| exon-intron | GLI2 | 2 | + | POLR2B | 4 | + |
| exon-exon | NOLC1 | 10 | + | NOTCH2NLC | 1 | - |
| exon-exon | CCDC69 | 5 | + | SLC35D2 | 9 | - |
| exon-exon | CSH1 | 17 | - | CSH2 | 17 | - |
| intron-exon | MIR4713HG | 15 | + | CRK | 17 | - |
| exon-intron | CSH2 | 17 | + | ZBTB38 | 3 | + |
| intron-exon | ZNF718 | 4 | - | DDB1 | 11 | + |
| intron-exon | CYB561D2 | 3 | + | LOC101928465 | 20 | - |
| exon-intron | HEG1 | 3 | + | AFDN | 6 | + |
| exon-exon | TAF15 | 17 | - | ND5 | MT | + |
| intron-exon | TMED10 | 14 | + | CDC27P1 | 2 | + |
| exon-exon | PTGES | 9 | + | INS-IGF2 | 11 | - |
| exon-exon | CLK1 | 2 | + | PAPPA-AS1 | 9 | - |
| exon-intron | TCEAL9 | X | - | NEDD9 | 6 | + |
| intron-exon | GANAB | 11 | + | STX7 | 6 | + |
| exon-exon | SIPA1L2 | 1 | - | SIPA1L2 | 1 | + |
| intron-exon | RAPGEF2 | 4 | + | TIMP3 | 22 | + |
| exon-exon | RNA45SN1 | 21 | - | RNA45SN1 | 21 | + |
| exon-intron | DVL3 | 3 | + | UVRAG | 11 | - |
| intron-exon | GNB4 | 3 | + | NLRP2 | 19 | - |
| intron-exon | UVRAG | 11 | + | SVEP1 | 9 | + |
| exon-exon | PAPPA-AS1 | 9 | - | PAPPA | 9 | + |
| exon-exon | ND4 | MT | - | GPC4 | X | - |
| intron-exon | SUZ12P1 | 17 | - | CSH1 | 17 | + |
| exon-exon | SDC3 | 1 | + | SDC3 | 1 | - |
| exon-exon | PSG7 | 19 | - | PSG3 | 19 | - |
| intron-exon | ZNF28 | 19 | + | ZNF160 | 19 | + |
| exon-exon | DPF2 | 11 | + | DPF2 | 11 | - |
| exon-exon | CSH1 | 17 | + | CSH1 | 17 | - |
| intron-exon | SLC7A2 | 8 | + | ETS2 | 21 | - |
| intron-exon | SBF2 | 11 | - | ADAM12 | 10 | - |
| exon-intron | VIM | 10 | + | PRKCI | 3 | + |
| exon-exon | MMS22L | 6 | - | EXOC6B | 2 | + |
| exon-exon | MPP1 | X | + | MPP1 | X | - |
| exon-exon | RNA45SN2 | 21 | + | GH2 | 17 | - |
| exon-exon | HNRNPA0 | 5 | + | PSG1 | 19 | - |
| intron-exon | PTPRM | 18 | + | PSG6 | 19 | + |
| exon-exon | FBXL4 | 6 | - | GOPC | 6 | - |
| intron-exon | PAX8 | 2 | - | PAX8-AS1 | 2 | + |
| intron-exon | SPIRE1 | 18 | + | PSMG2 | 18 | + |
| exon-intron | HSPA8 | 11 | - | MCTP2 | 15 | - |
| intron-exon | OSTC | 4 | - | LOC105373796 | 2 | - |
| exon-exon | HDGF | 1 | + | MIR100HG | 11 | - |
| exon-exon | CLU | 8 | - | ATP6 | MT | + |
| exon-exon | ABO | 9 | + | CFAP298-TCP10L | 21 | - |
| intron-exon | KRT7 | 12 | + | PLXNB2 | 22 | - |
| exon-exon | ATP6 | MT | - | TUBB4B | 9 | + |
| exon-exon | PIAS4 | 19 | - | PIAS4 | 19 | + |
| exon-exon | SLC24A3 | 20 | - | CNOT7 | 8 | - |
| exon-exon | SPTBN1 | 2 | + | SPTBN1 | 2 | - |
| intron-exon | HEG1 | 3 | - | GNAS | 20 | - |
| exon-exon | PCCA-DT | 13 | - | ADIPOR1 | 1 | - |
| exon-exon | PABPC1P4 | 12 | - | PABPC1P4 | 12 | + |
| exon-exon | PPDPF | 20 | + | NEAT1 | 11 | - |
| exon-exon | LOC100132062 | 5 | - | LOC100132062 | 5 | + |
| exon-exon | RSRP1 | 1 | - | GNAS | 20 | + |
| exon-exon | MED31 | 17 | + | MED31 | 17 | - |
| intron-exon | RNR1 | MT | + | C5AR1 | 19 | + |
| intron-exon | CYTH1 | 17 | + | RASA3 | 13 | - |
| exon-exon | GPI | 19 | - | GPI | 19 | + |
| exon-intron | ACTN4 | 19 | + | NR2F1-AS1 | 5 | + |
| exon-exon | UBR5 | 8 | - | KMT2C | 7 | - |
| intron-exon | NCOA2 | 8 | + | RHOB | 2 | - |
| exon-exon | SUPT16H | 14 | - | EMP2 | 16 | - |
| exon-exon | SPTBN2 | 11 | - | DPM2 | 9 | + |
| exon-intron | CTTN | 11 | + | MAPK14 | 6 | + |
| exon-exon | PSMB8-AS1 | 6 | + | PYGB | 20 | + |
| exon-intron | FLOT2 | 17 | + | SLC23A2 | 20 | - |
| exon-intron | PURA | 5 | - | KYNU | 2 | + |
| exon-exon | RPS9 | 19 | - | IGHA2 | 14 | - |
| exon-intron | TRIM33 | 1 | - | LOC100420172 | 14 | + |
| exon-exon | CD163 | 12 | - | A2ML1 | 12 | + |
| exon-intron | NET1 | 10 | + | MOSMO | 16 | + |
| intron-exon | RSRC2 | 12 | - | HECTD1 | 14 | + |
| intron-exon | SPOCK1 | 5 | + | TCTN3 | 10 | - |
| exon-exon | SFPQ | 1 | + | SFPQ | 1 | - |
| exon-exon | THOC1 | 18 | + | THOC1 | 18 | - |
| exon-intron | RPAP3 | 12 | + | IQSEC1 | 3 | + |
| exon-exon | IGHG1 | 14 | + | IGHG3 | 14 | + |
| exon-intron | FLNB | 3 | - | MECP2 | X | + |
| exon-exon | CDC42SE1 | 1 | - | ATP6 | MT | + |
| exon-exon | LINC01480 | 19 | + | PPP1CC | 12 | + |
| intron-exon | PAK1 | 11 | - | FANCA | 16 | - |
| intron-exon | ANXA2 | 15 | + | ANXA2 | 15 | - |
| exon-intron | NONO | X | + | NONO | X | - |
| exon-intron | PI4KAP1 | 22 | - | PI4KAP1 | 22 | + |
| exon-intron | POP1 | 8 | + | NDRG1 | 8 | + |
| exon-exon | ATN1 | 12 | + | ATP8 | MT | + |
| exon-exon | MTMR11 | 1 | - | ZNF585A | 19 | + |
| intron-exon | CDKAL1 | 6 | + | MX2 | 21 | - |
| exon-exon | FBXW7 | 4 | - | PRH1-PRR4 | 12 | + |
| exon-exon | SIX1 | 14 | - | TIMMDC1 | 3 | + |
| exon-intron | SLC25A29 | 14 | - | ARID2 | 12 | - |
| intron-exon | GTDC1 | 2 | + | NRXN3 | 14 | - |
| intron-exon | MRTFA | 22 | + | PBX1 | 1 | + |
| exon-intron | RNA45SN2 | 21 | + | RNA28SP | 21 | + |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN1 | 21 | + |
| exon-exon | TET3 | 2 | + | TET3 | 2 | - |
| intron-exon | FBXO33 | 14 | - | IFT140 | 16 | - |
| exon-exon | MTFR1L | 1 | - | BROX | 1 | - |
| exon-exon | UBE2G1 | 17 | - | ATP6 | MT | + |
| exon-exon | IKZF3 | 17 | - | RPL12 | 9 | - |
| exon-exon | TAF7 | 5 | - | CYFIP2 | 5 | - |
| exon-intron | CDIP1 | 16 | - | KIAA1671 | 22 | + |
| exon-exon | BICD1 | 12 | + | BICD1 | 12 | - |
| exon-intron | ARHGEF9 | X | + | NCAM2 | 21 | + |
| exon-exon | LOC101929506 | 10 | + | NUTM2B-AS1 | 10 | + |
| exon-exon | TUBA1B | 12 | - | TUBA1B | 12 | + |
| exon-exon | PPM1K | 4 | - | LRPPRC | 2 | - |
| exon-intron | TNFSF12-TNFSF13 | 17 | + | CLEC4A | 12 | + |
| exon-exon | ND5 | MT | + | SH3D19 | 4 | - |
| intron-exon | ZRANB1 | 10 | - | RPL29P26 | 12 | + |
| exon-exon | PHF2 | 9 | - | BPTF | 17 | + |
| exon-intron | KPNB1 | 17 | - | S100A13 | 1 | - |
| exon-exon | PIGQ | 16 | + | TMEM241 | 18 | - |
| exon-exon | CSNK2A1 | 20 | - | RNA45SN1 | 21 | - |
| intron-exon | TMEM116 | 12 | + | SOCS2 | 12 | - |
| exon-exon | ND4 | MT | + | ND6 | MT | + |
| exon-exon | NTMT1 | 9 | - | MAEL | 1 | - |
| exon-exon | SSR1 | 6 | - | CYTB | MT | - |
| exon-intron | TFRC | 3 | - | ASTN2 | 9 | - |
| exon-exon | CPSF7 | 11 | + | KRT10 | 17 | + |
| exon-exon | ND6 | MT | + | ATP8 | MT | + |
| exon-exon | DLGAP4 | 20 | - | FBXW10 | 17 | - |
| intron-exon | LOC107987208 | 14 | - | RNA45SN3 | 21 | + |
| intron-exon | MRPL45P2 | 17 | + | ND6 | MT | + |
| intron-exon | PRKY | Y | - | GJA1 | 6 | - |
| exon-exon | LOC100506548 | 5 | + | MAPK8IP2 | 22 | + |
| intron-exon | CDK19 | 6 | + | CALD1 | 7 | + |
| exon-intron | MSI2 | 17 | + | LOC105371574 | 17 | + |
| intron-exon | MVP | 16 | - | ND5 | MT | + |
| intron-exon | ERBB4 | 2 | + | ERC1 | 12 | + |
| exon-intron | MRO | 18 | - | RORA | 15 | - |
| exon-exon | KIAA1210 | X | - | LIG3 | 17 | + |
| exon-intron | ND3 | MT | - | DPP10 | 2 | + |
| exon-exon | PDCD4 | 10 | - | IFITM2 | 11 | - |
| exon-exon | ND6 | MT | + | ATP6 | MT | + |
| exon-exon | ND1 | MT | + | BAZ2A | 12 | - |
| exon-intron | ZKSCAN8 | 6 | + | RBFOX1 | 16 | + |
| exon-intron | DDX18 | 2 | - | SNX3 | 6 | - |
| intron-exon | LOC100996442 | 1 | + | EMC1 | 1 | - |
| exon-intron | STAG3L5P-PVRIG2P-PILRB | 7 | - | MIR497HG | 17 | - |
| exon-exon | NUDCD3 | 7 | + | PTCH1 | 9 | + |
| exon-exon | SLCO2B1 | 11 | + | MFAP1 | 15 | + |
| exon-exon | SF3A3 | 1 | + | SHANK1 | 19 | - |
| exon-exon | SPOCK2 | 10 | + | SPOCK2 | 10 | - |
| exon-exon | AGAP1 | 2 | + | YBX3 | 12 | + |
| intron-exon | ACSF2 | 17 | - | CYFIP1 | 15 | - |
| exon-intron | PTMS | 12 | - | FHOD3 | 18 | + |
| exon-exon | WDR45 | X | + | RNA45SN2 | 21 | + |
| exon-intron | CACNA2D4 | 12 | + | XPO6 | 16 | + |
| exon-exon | COX1 | MT | - | CLUH | 17 | - |
| intron-exon | ADGRD1 | 12 | - | SMTN | 22 | - |
| intron-exon | TSNARE1 | 8 | - | TAB2 | 6 | - |
| exon-exon | FAM153B | 5 | + | ATP6 | MT | + |
| exon-intron | SPARCL1 | 4 | + | PHF2 | 9 | - |
| exon-intron | ATP6 | MT | + | IMMP2L | 7 | + |
| intron-exon | ANO2 | 12 | + | ND5 | MT | + |
| exon-exon | CXADR | 21 | + | FHL1 | X | - |
| intron-exon | GSE1 | 16 | + | RNASE1 | 14 | - |
| exon-intron | TLN1 | 9 | - | NCOR2 | 12 | + |
| exon-exon | SENP6 | 6 | - | ZKSCAN8 | 6 | + |
| exon-exon | RNA45SN2 | 21 | - | ACTB | 7 | + |
| intron-exon | RMDN2-AS1 | 2 | - | RMDN2 | 2 | + |
| exon-exon | ATP6 | MT | + | FATE1 | X | + |
| exon-exon | DNAJA3 | 16 | - | RAB5C | 17 | + |
| exon-intron | SLC2A3 | 12 | + | LHPP | 10 | + |
| exon-exon | LYRM2 | 6 | - | FAM234B | 12 | + |
| exon-intron | RNA45SN2 | 21 | + | DOCK8 | 9 | + |
| exon-exon | RNA45SN1 | 21 | - | RNA45SN2 | 21 | - |
| exon-exon | UBE2I | 16 | - | RNA45SN1 | 21 | - |
| exon-exon | TRA2A | 7 | + | HMGB2 | 4 | + |
| intron-exon | NUP50-DT | 22 | + | S100A9 | 1 | + |
| exon-exon | FAM149B1 | 10 | - | TAF6 | 7 | - |
| intron-exon | WDR45B | 17 | + | MALAT1 | 11 | + |
| intron-exon | CMTM7 | 3 | - | FLNA | X | + |
| exon-exon | ERCC6 | 10 | + | CEP350 | 1 | - |
| intron-exon | ABLIM1 | 10 | + | SMG1 | 16 | - |
| exon-intron | SAR1B | 5 | + | NUP50 | 22 | + |
| exon-intron | TMSB4XP8 | 4 | - | KPNA3 | 13 | + |
| exon-intron | RBM25 | 14 | + | LINC00923 | 15 | + |
| exon-intron | TOPORS | 9 | - | SNHG8 | 4 | + |
| intron-exon | EFNA5 | 5 | + | IQGAP1 | 15 | + |
| intron-exon | ETS1 | 11 | + | EP300 | 22 | + |
| intron-exon | SLC1A6 | 19 | + | KAT7 | 17 | + |
| exon-intron | DST | 6 | + | PRKDC | 8 | - |
| exon-exon | VAPA | 18 | - | VAPA | 18 | + |
| exon-exon | NEAT1 | 11 | + | NAA50 | 3 | - |
| exon-intron | ERBIN | 5 | + | LINC00673 | 17 | - |
| intron-exon | CHD9 | 16 | - | SFN | 1 | - |
| exon-exon | IGHG1 | 14 | + | RNA45SN3 | 21 | + |
| exon-exon | KIAA0232 | 4 | - | C2orf49 | 2 | - |
| exon-exon | PPIG | 2 | + | SRSF5 | 14 | + |
| exon-intron | ARF6 | 14 | - | FPGS | 9 | - |
| exon-exon | XIST | X | - | DECR2 | 16 | + |
| exon-exon | HMGB2 | 4 | + | MFAP1 | 15 | + |
| intron-exon | ZNF66 | 19 | + | TUBA1B | 12 | - |
| exon-exon | ADI1 | 2 | + | TUBB6 | 18 | - |
| exon-exon | NFE2L2 | 2 | - | HNRNPD | 4 | + |
| exon-exon | INSIG1 | 7 | + | NEPRO | 3 | + |
| exon-exon | RPL6 | 12 | + | HSP90AA1 | 14 | + |
| intron-exon | ELMO1 | 7 | + | EEF1A1P5 | 9 | - |
| exon-exon | HSP90AA1 | 14 | - | HNRNPD | 4 | - |
| exon-exon | RNA45SN2 | 21 | + | ACTB | 7 | - |
| intron-exon | EEA1 | 12 | + | RPL6 | 12 | - |
| exon-exon | DDX5 | 17 | - | ELOVL5 | 6 | + |
| intron-exon | AC069277.1 | | + | LOC105376944 | | + |
| exon-intron | IGKV1D-39 | 2 | + | IGK | 2 | - |
| exon-exon | SYNGR2P1 | | - | NCAPGP2 | | - |
| exon-intron | RPL23 | 17 | - | IGSF5 | 21 | + |
| intron-exon | BICRAL | 6 | + | ND2 | MT | + |
| exon-intron | OSBPL9 | 1 | + | ENSG00000201426 | | + |
| exon-intron | LOC284344 | | - | AC004784.1 | | - |
| exon-exon | RALYL | 8 | - | RALYL | 8 | + |
| intron-exon | TMEM51-AS1 | 1 | - | COL12A1 | 6 | + |
| intron-exon | PABPC4-AS1 | 1 | + | GALNT5 | 2 | - |
| exon-exon | RUSC1-AS1 | 1 | - | FDPS | 1 | - |
| exon-intron | GREB1L | 18 | + | ESCO1 | 18 | + |
| exon-exon | LBH | 2 | - | F3 | 1 | + |
| intron-exon | LINC02384 | 12 | - | LOC105369819 | 12 | - |
| exon-intron | MCMDC2 | 8 | + | LOC107984461 | 12 | - |
| exon-exon | ARHGEF7 | 13 | + | ARHGEF7 | 13 | - |
| intron-exon | RRP8 | 11 | - | LIN54 | 4 | + |
| exon-exon | CCDC102A | 16 | + | RNA45SN3 | 21 | - |
| exon-exon | TRA2B | 3 | + | GPX4 | 19 | - |
| exon-exon | MRPL43 | 10 | + | RTL8C | X | - |
| exon-exon | THRAP3 | 1 | + | ZBTB26 | 9 | - |
| exon-exon | TNRC18 | 7 | + | HNRNPA3 | 2 | + |
| exon-exon | DNAJC16 | 1 | + | AGMAT | 1 | + |
| exon-exon | MEG3 | 14 | - | STARD7 | 2 | + |
| intron-exon | AC245297.3 | 1 | + | LOC100996723 | 1 | - |
| exon-exon | SMG1P2 | 16 | - | TBX2-AS1 | | - |
| exon-exon | UCN2 | 3 | - | PFKFB4 | 3 | - |
| intron-exon | TSTD3 | 6 | + | CCNC | 6 | - |
| exon-exon | IER5L | 9 | - | RRAGC | 1 | - |
| exon-exon | RPL14 | 3 | + | MED12 | X | + |
| intron-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-exon | HMGA1 | 6 | + | IL2RB | 22 | - |
| intron-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| intron-exon | RNU6-2 | 19 | + | ATP5PB | 1 | + |
| intron-exon | WT1 | | + | MALAT1 | 11 | + |
| exon-exon | MGST1 | 12 | + | LOC107984494 | | + |
| exon-intron | SEC11A | 15 | - | ZNF497 | 19 | - |
| intron-exon | LOC107984969 | 17 | - | TMEM11 | 17 | - |
| exon-intron | LRRC58 | 3 | - | GTF2F2 | | + |
| exon-intron | NCL | 2 | - | DCC | 18 | - |
| exon-intron | ND4L | MT | + | ND4 | MT | + |
| exon-intron | STAG3L2 | 7 | - | LOC106029312 | | - |
| exon-exon | UTP6 | 17 | + | MIR205HG | 1 | + |
| exon-exon | RNA45SN1 | 21 | - | EEF1D | 8 | - |
| exon-exon | PHLDA1 | 12 | + | GSN | 9 | + |
| exon-exon | KRT14 | 17 | + | HNRNPAB | 5 | - |
| exon-exon | FADS2 | 11 | - | RPS27P3 | | - |
| exon-exon | TCP1P3 | 12 | - | TCP1 | 6 | - |
| intron-exon | RND3 | 2 | - | HSPA8 | 11 | - |
| exon-intron | AQP3 | 9 | - | RERE | 1 | + |
| intron-exon | LOC105373064 | 22 | - | NUP50 | 22 | + |
| exon-exon | COL12A1 | 6 | + | COL12A1 | 6 | - |
| exon-exon | SCAND2P | 15 | + | RHOA | 3 | - |
| exon-exon | SMARCA4 | 19 | - | SMARCA4 | 19 | + |
| exon-exon | CENPBD1P1 | 19 | - | RDX | 11 | - |
| exon-exon | SNX19 | 11 | + | RPS23 | 5 | - |
| exon-exon | MYO1E | 15 | - | USP54 | 10 | - |
| intron-exon | PCBD2 | 5 | + | ND6 | MT | - |
| intron-exon | ZNF587 | 19 | - | ZNF814 | 19 | - |
| exon-exon | ZNF418 | 19 | - | ZNF417 | 19 | - |
| exon-exon | CDH1 | 16 | - | CDH1 | 16 | + |
| exon-exon | HGS | 17 | + | HGS | 17 | - |
| intron-exon | IFT52 | 20 | + | USP4 | 3 | + |
| exon-exon | CRCP | 7 | - | CRCP | 7 | + |
| exon-intron | PEX26 | 22 | - | TSHZ2 | 20 | - |
| exon-exon | DLG1 | 3 | + | LPP | 3 | - |
| intron-exon | RANBP10 | 16 | - | BPIFA1 | 20 | + |
| exon-exon | PSMA6 | 14 | + | XAF1 | 17 | + |
| intron-exon | GPC6 | 13 | + | MPHOSPH8 | 13 | + |
| exon-intron | ULBP3 | 6 | + | BORCS7-ASMT | 10 | + |
| intron-exon | RBFOX1 | 16 | + | KRT6B | 12 | - |
| intron-exon | ALG12 | 22 | - | ZBED4 | 22 | + |
| intron-exon | MEMO1P1 | 21 | - | RAC1 | 7 | + |
| exon-exon | HLA-B | 6 | + | ITM2C | 2 | + |
| exon-exon | ZNF500 | 16 | + | THOC2 | X | - |
| exon-intron | IGKV2D-29 | 2 | + | IGK | 2 | + |
| exon-intron | IGLV3-21 | 22 | + | IGL | 22 | + |
| exon-intron | IGLC2 | 22 | + | IGL | 22 | + |
| exon-intron | ND4L | MT | + | ND4 | MT | + |
| intron-exon | UBE2E2 | 3 | + | SRSF3 | 6 | + |
| exon-intron | IGKV2D-28 | 2 | + | IGK | 2 | + |
| intron-exon | IGK | 2 | + | IGKV2-28 | 2 | - |
| exon-intron | IGLC2 | 22 | + | IGL | 22 | + |
| exon-intron | IGLC2 | 22 | + | IGL | 22 | + |
| exon-intron | IGKV2D-28 | 2 | + | IGK | 2 | - |
| intron-exon | IGK | 2 | + | IGKV2-28 | 2 | - |
| exon-intron | IGLV3-1 | 22 | + | IGL | 22 | + |
| exon-exon | RNA45SN1 | 21 | + | COX2 | MT | + |
| intron-exon | IGK | 2 | + | IGKV2-28 | 2 | - |
| exon-intron | IGKV2D-28 | 2 | + | IGK | 2 | - |
| exon-exon | TMEM18 | 2 | - | SH3YL1 | 2 | - |
| exon-exon | MAPK14 | 6 | - | MAPK14 | 6 | + |
| exon-exon | PVT1 | 8 | + | LINC00824 | 8 | - |
| exon-intron | GIGYF1 | 7 | - | DGKZ | 11 | - |
| exon-exon | FTH1 | 11 | + | PABPC1 | 8 | - |
| exon-exon | MRFAP1 | 4 | + | KDELR2 | 7 | - |
| exon-intron | LOC105377845 | | - | AL713998.1 | | - |
| intron-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-exon | PLBD2 | 12 | - | RPUSD4 | 11 | - |
| exon-intron | SNX5 | 20 | + | MITF | 3 | - |
| exon-exon | ILVBL | 19 | - | SYDE1 | 19 | - |
| exon-exon | KIF9 | 3 | + | KIF9 | 3 | - |
| exon-exon | CCL15-CCL14 | 17 | + | CCL14 | 17 | + |
| exon-intron | SMARCA4 | 19 | - | MAD1L1 | 7 | + |
| exon-exon | ARX | X | + | RNA45SN2 | 21 | - |
| exon-exon | ETFBKMT | 12 | + | MAPK8 | 10 | + |
| exon-exon | SUOX | 12 | - | SUOX | 12 | + |
| intron-exon | LOC107984826 | 16 | + | ARHGAP17 | 16 | + |
| exon-exon | CAV1 | 7 | - | MCM9 | 6 | + |
| exon-exon | SLC20A1 | 2 | - | FN1 | 2 | + |
| exon-intron | TENT5A | 6 | + | EPAS1 | 2 | + |
| exon-exon | SLC2A4RG | 20 | - | MOK | 14 | + |
| exon-intron | NSUN4 | 1 | + | OSBPL1A | 18 | + |
| intron-exon | FREM2 | 13 | - | UFM1 | 13 | - |
| exon-intron | NDUFA13 | 19 | + | SELENOV | | + |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-intron | CKLF | 16 | + | AL592429.2 | | - |
| exon-exon | DUSP15 | | - | FOXS1 | | - |
| intron-exon | HOOK2 | 19 | - | PRDX2 | 19 | - |
| exon-exon | ZSCAN30 | 18 | - | GNB1 | 1 | - |
| exon-exon | BRSK1 | 19 | + | UCK1 | 9 | - |
| exon-intron | BTG1 | 12 | - | LINC01619 | | - |
| exon-intron | RPL9P8 | 15 | - | UBE2Q2P2 | 15 | - |
| exon-exon | DICER1 | 14 | + | DICER1-AS1 | | + |
| exon-exon | TRABD | 22 | - | TRABD | 22 | + |
| exon-exon | TNPO1 | 5 | - | TNPO1 | 5 | + |
| exon-exon | RABEPK | 9 | - | RABEPK | 9 | + |
| exon-exon | CDC25B | 20 | - | CDC25B | 20 | + |
| exon-intron | EIF3C | 16 | - | MMP24-AS1-EDEM2 | 20 | - |
| exon-exon | LOC646903 | | - | PFN2 | 3 | - |
| exon-intron | ZDHHC8 | | - | MTND4LP5 | | - |
| exon-exon | PPP1R10 | 6 | + | PPP1R10 | 6 | - |
| intron-exon | MYL6 | 12 | + | EP400 | 12 | + |
| exon-intron | LOC105376177 | | + | SYT2 | 1 | - |
| exon-exon | NUBPL | | + | IPO9 | 1 | + |
| exon-intron | RNF7 | 3 | + | AC112504.2 | | + |
| intron-exon | AC011997.1 | | + | BOLL | | + |
| exon-exon | COX1 | MT | + | MIR12136 | 1 | + |
| intron-exon | AL390800.1 | | + | LOC105370467 | | + |
| exon-intron | SAMD5 | | + | RP11-307P5.1 | 6 | + |
| intron-exon | RHCE | 1 | + | SDHDP7 | | + |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-intron | LOC105373208 | 1 | - | LOC105373209 | | - |
| exon-intron | LOC105377845 | | - | AL713998.1 | | - |
| intron-exon | LOC105371954 | 18 | - | LINC00470 | 18 | - |
| exon-intron | MT2A | 16 | + | LOC105370198 | 13 | - |
| exon-intron | NDUFB2 | 7 | + | MALT1 | 18 | - |
| intron-exon | AC092295.1 | | + | ZNF529 | 19 | + |
| intron-exon | LINC02613 | 2 | + | RPLP0P6 | 2 | + |
| exon-exon | ARF3 | 12 | - | INTS3 | 1 | - |
| exon-intron | RPS8P8 | 5 | + | GATAD2A | 19 | - |
| exon-exon | UBR7 | 14 | - | GON7 | 14 | - |
| intron-exon | LOC105377609 | | + | LINC01060 | | + |
| exon-intron | LARP4 | 12 | + | WWTR1 | 3 | + |
| exon-intron | NSA2 | 5 | + | FAM169A | 5 | + |
| intron-exon | SYNJ2 | 6 | - | VAPA | 18 | + |
| exon-intron | TXNDC9 | 2 | - | LOC107985923 | 2 | + |
| intron-exon | LOC112543471 | | - | NR2C2AP | | - |
| exon-exon | RPS26P25 | 4 | - | ZNF664 | 12 | + |
| exon-exon | CALM1 | 14 | + | PSME3 | 17 | + |
| exon-intron | ACTR6 | 12 | + | DEPDC4 | 12 | + |
| exon-intron | RPL35 | 9 | - | CWF19L1 | 10 | + |
| intron-exon | PDK1 | 2 | - | ITGA6-AS1 | 2 | - |
| exon-exon | CYP4F8 | 19 | - | CC2D1A | 19 | - |
| exon-intron | KLK3 | 19 | - | CACNB2 | 10 | - |
| exon-exon | AZGP1 | 7 | + | KLHL21 | 1 | + |
| exon-exon | IGFBP2 | 2 | - | DNMT3L-AS1 | 21 | + |
| intron-exon | LOC112268284 | 21 | - | ATP1A3 | 19 | + |
| exon-exon | PLAAT4 | 11 | - | SCPEP1 | 17 | - |
| exon-exon | SMARCA4 | 19 | - | PPDPF | 20 | - |
| exon-intron | CD74 | 5 | + | PTPN1 | 20 | - |
| exon-exon | GRTP1 | 13 | - | EMC9 | 14 | + |
| exon-exon | PGAM1 | 10 | - | PAPOLA | 14 | - |
| exon-intron | ABHD12B | 14 | - | DHX30 | 3 | - |
| exon-exon | ADAMTS10 | 19 | + | REXO4 | 9 | - |
| exon-exon | FARP1 | 13 | - | DKK3 | 11 | + |
| exon-exon | MICU3 | 8 | + | SSX2IP | 1 | - |
| exon-exon | RAB7A | 3 | - | IFNAR2 | 21 | + |
| intron-exon | LOC107985305 | 19 | - | PVR | 19 | + |
| intron-exon | CAMK1D | 10 | - | LRRFIP2 | 3 | - |
| intron-exon | NIT1 | 1 | + | HSP90B1 | 12 | + |
| exon-exon | ELP1 | 9 | + | ELP1 | 9 | - |
| exon-exon | PTMA | 2 | - | PTMA | 2 | + |
| exon-exon | SLC30A6 | 2 | + | PCYOX1 | 2 | + |
| exon-exon | GOLIM4 | 3 | - | DNAJC2 | 7 | - |
| intron-exon | SYBU | 8 | + | KPNA4 | 3 | + |
| exon-intron | SAFB2 | 19 | + | TMEM63A | 1 | - |
| exon-exon | EPCAM | 2 | - | PERP | 6 | - |
| exon-intron | GMPSP1 | 4 | + | DDX11-AS1 | 12 | - |
| intron-exon | PIK3R2 | 19 | - | RNA45SN1 | 21 | + |
| exon-intron | HOXD9 | 2 | - | HOXD-AS2 | 2 | + |
| exon-intron | LUC7L2 | 7 | + | NBAS | 2 | - |
| exon-intron | POLR2A | 17 | - | WARS1 | 14 | + |
| intron-exon | TMEM177 | 2 | + | ERBB2 | 17 | - |
| exon-intron | CDC42BPB | 14 | - | BICD1 | 12 | - |
| exon-exon | PSMA7 | 20 | + | PSMA7 | 20 | - |
| exon-intron | IGHV1-2 | 14 | - | IGH | 14 | - |
| exon-exon | PIK3CB | 3 | - | RPS24 | 10 | + |
| exon-exon | SEC63 | 6 | - | COX1 | MT | + |
| intron-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-exon | C4orf46 | 4 | - | SCNM1 | 1 | + |
| intron-exon | STYXL1 | 7 | + | MDH2 | 7 | + |
| exon-exon | XRCC4 | 5 | - | TMEM167A | 5 | - |
| exon-exon | OR51B5 | 11 | - | SRP9P1 | 10 | - |
| exon-intron | PRDX6 | 1 | + | SNX29 | 16 | + |
| exon-exon | DEDD2 | 19 | - | EPB41L2 | 6 | - |
| exon-intron | COX1 | MT | + | TRNS1 | MT | + |
| exon-exon | SPINT1 | 15 | + | PTMAP2 | 5 | + |
| exon-exon | MRPL15 | 8 | + | FAM72A | 1 | - |
| intron-exon | ZFPM2 | 8 | - | ZFPM2-AS1 | 8 | - |
| intron-exon | ZNF581 | 19 | + | ZNF580 | 19 | + |
| exon-exon | ANP32B | 9 | + | RANBP1 | 22 | - |
| exon-intron | SNTB2 | 16 | + | OSBPL1A | 18 | + |
| exon-exon | LOC100996842 | 17 | - | MPDU1 | 17 | - |
| exon-exon | ATP5ME | 4 | - | MYL5 | 4 | - |
| exon-intron | HMGB1P6 | 15 | - | THSD4 | 15 | - |
| exon-intron | RPS26P25 | 4 | - | ANK2 | 4 | - |
| exon-intron | CBX4 | 17 | - | MPPED1 | | - |
| exon-intron | GNG11 | 7 | + | LOC105375402 | 7 | + |
| exon-exon | TCAIM | 3 | + | UEVLD | 11 | - |
| intron-exon | AGBL5 | 2 | - | OST4 | 2 | - |
| exon-exon | ATG3 | 3 | - | SLC35A5 | 3 | - |
| exon-exon | CENPF | 1 | + | TUBA1B | 12 | - |
| intron-exon | WDR38 | 9 | - | RPL35 | 9 | - |
| intron-exon | WDR38 | 9 | - | RPL35 | 9 | - |
| exon-exon | LGALS1 | 22 | + | KLHL29 | 2 | + |
| intron-exon | SHCBP1L | 1 | - | F8 | X | - |
| exon-intron | RNF40 | 16 | + | TTLL1 | 22 | + |
| exon-intron | CBWD3 | 9 | + | APOLD1 | 12 | + |
| exon-intron | RPSAP52 | 12 | - | HMGA2 | 12 | - |
| intron-exon | AGBL5 | 2 | - | OST4 | 2 | - |
| intron-exon | ATG10 | 5 | - | PKM | 15 | - |
| intron-exon | WASHC4 | 12 | + | EIF3J-DT | 15 | - |
| exon-exon | BOLA2-SMG1P6 | 16 | - | SMG1P6 | 16 | - |
| exon-intron | RNU6-7 | 14 | + | PANK2 | 20 | + |
| exon-intron | ACTG1 | 17 | - | TMEM222 | | + |
| intron-exon | MAP3K13 | 3 | + | RPL4 | 15 | - |
| intron-exon | PPP5D1 | 19 | - | PNMA8A | 19 | - |
| exon-exon | SLC25A6 | Y | - | MAPKAP1 | | - |
| intron-exon | ATP9B | | + | EFHD2 | | + |
| exon-exon | MRPL30 | 2 | + | RPS15A | 16 | - |
| exon-intron | RPL10AP6 | 3 | - | SIGLEC11 | 19 | + |
| exon-intron | RBM48P1 | | - | AC097528.1 | | - |
| exon-exon | ERC1 | 12 | - | ERC1 | 12 | + |
| exon-exon | SNHG16 | 17 | + | PNMA8A | 19 | - |
| intron-exon | WDR47 | 1 | + | RPL17P7 | 1 | + |
| exon-exon | MORC4 | X | - | RIPPLY1 | | - |
| exon-exon | DFFA | 1 | + | DKC1 | | + |
| exon-exon | LARGE1 | 22 | + | LARGE1 | 22 | - |
| exon-exon | SND1 | 7 | - | MYOG | 1 | - |
| exon-intron | NDUFS5 | 1 | + | ABO | | - |
| exon-intron | SPARC | 5 | - | PCAT29 | | + |
| exon-exon | GYG2 | X | - | GYG2 | X | + |
| exon-exon | RPLP0P6 | 2 | + | VKORC1 | 16 | - |
| exon-exon | KPNA2 | 17 | - | KPNA2 | 17 | + |
| exon-exon | SDF4 | 1 | + | BUD23 | 7 | + |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| intron-exon | HAUS7 | X | + | BGN | X | + |
| exon-exon | NEDD8-MDP1 | 14 | + | NEDD8-MDP1 | 14 | - |
| exon-intron | RPS5 | 19 | + | MARK2 | 11 | + |
| exon-exon | CYB561 | 17 | - | CCT6A | 7 | + |
| exon-exon | PPP1R10 | 6 | + | PPP1R10 | 6 | - |
| exon-exon | SLC39A9 | 14 | + | MFF | 2 | + |
| exon-exon | MRFAP1 | 4 | + | ATP8 | MT | + |
| intron-exon | NOP14-AS1 | 4 | - | MFSD10 | | - |
| exon-intron | GPX1 | 3 | - | LOC105373137 | X | - |
| exon-intron | LRRC8A | 9 | + | ATP6V1A | 3 | + |
| exon-exon | RPS4X | X | + | RPS4X | X | - |
| intron-exon | IGF2BP3 | 7 | - | SSR2 | 1 | + |
| exon-exon | RAB1A | 2 | - | COL1A1 | 17 | - |
| exon-exon | HYOU1 | 11 | + | HYOU1 | 11 | - |
| exon-exon | KDM3A | 2 | - | LOC102723996 | 21 | - |
| exon-exon | RBM42 | 19 | - | B2M | 15 | - |
| exon-intron | TBC1D17 | 19 | - | HDAC7 | 12 | + |
| intron-exon | FNDC3A | 13 | - | KIAA0040 | 1 | - |
| exon-intron | BAZ1B | 7 | + | BAZ1B | 7 | - |
| exon-exon | TFCP2L1 | 2 | + | TFCP2L1 | 2 | - |
| exon-intron | HNRNPUL2-BSCL2 | 11 | + | MTATP6P1 | 1 | + |
| exon-intron | CLNS1A | 11 | - | TTC28 | 22 | + |
| intron-exon | UBE3C | 7 | - | ZNF667 | 19 | - |
| exon-exon | ZNF766 | 19 | + | ITPR2 | 12 | - |
| exon-intron | RNA45SN3 | 21 | + | RNA28SP | 21 | + |
| exon-exon | SPINK1 | 5 | + | C5orf46 | 5 | + |
| exon-intron | RBBP8 | 18 | + | STK24 | 13 | + |
| exon-intron | TES | 7 | - | MBD2 | 18 | - |
| exon-intron | ZDHHC21 | 9 | - | VPS37C | 11 | - |
| exon-intron | PUM3 | 9 | - | PUM3 | 9 | + |
| intron-exon | RNR2 | MT | - | FYB1 | 5 | + |
| exon-intron | COL3A1 | 2 | + | ARHGAP18 | 6 | + |
| intron-exon | RAP1A | 1 | - | SEL1L | 14 | - |
| exon-intron | CS | 12 | - | RAP2C-AS1 | X | + |
| exon-intron | ATP6V1C2 | 2 | + | ATM | 11 | - |
| exon-exon | NPNT | 4 | - | ST3GAL1 | 8 | - |
| exon-exon | GRK4 | 4 | + | GRK4 | 4 | - |
| exon-intron | POTEKP | 2 | - | RNF144A | 2 | - |
| exon-intron | APP | 21 | + | APP | 21 | - |
| intron-exon | TRIO | 5 | + | PITPNA | 17 | - |
| exon-intron | SORCS1 | 10 | - | FOCAD | 9 | + |
| exon-exon | CLINT1 | 5 | + | CLINT1 | 5 | - |
| intron-exon | PDE4D | 5 | + | LAMTOR5 | 1 | + |
| exon-exon | AKR1C4 | 10 | - | EIF1AXP1 | 1 | + |
| intron-exon | DRAM1 | 12 | + | ND5 | MT | + |
| exon-intron | MCUR1 | 6 | - | NEDD1 | 12 | + |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN1 | 21 | + |
| exon-exon | RNA45SN1 | 21 | - | RNA45SN2 | 21 | + |
| intron-exon | RNA28SP | 21 | - | RNA45SN2 | 21 | - |
| intron-exon | NCK2 | 2 | - | DDI2 | 1 | + |
| exon-exon | PGS1 | 17 | + | ZZEF1 | 17 | - |
| exon-exon | ANXA6 | 5 | + | ANXA6 | 5 | - |
| exon-exon | PPIAP22 | 21 | - | PPIA | 7 | + |
| exon-exon | ARSG | 17 | - | ARSG | 17 | + |
| exon-intron | CUX1 | 7 | + | COL1A2 | 7 | + |
| exon-intron | ASH1L | 1 | + | CUL9 | 6 | + |
| intron-exon | POLR3C | 1 | + | POLR3C | 1 | - |
| exon-intron | MICAL3 | 22 | + | MICAL3 | 22 | - |
| exon-exon | SRSF3 | 6 | - | SRSF3 | 6 | + |
| exon-exon | ND4 | MT | - | PABPC1 | 8 | + |
| intron-exon | NCF1C | 7 | - | NCF1 | 7 | - |
| exon-exon | MTFR1L | 1 | - | MTFR1L | 1 | + |
| exon-exon | STAU2 | 8 | + | DEK | 6 | - |
| exon-exon | SRSF2 | 17 | - | MFSD11 | 17 | - |
| exon-exon | NEAT1 | 11 | - | NEAT1 | 11 | + |
| exon-exon | GAPDH | 12 | - | GAPDH | 12 | + |
| exon-exon | SRSF3 | 6 | - | SRSF3 | 6 | + |
| exon-exon | RAB31 | 18 | - | RAB31 | 18 | + |
| exon-exon | MINDY2 | 15 | + | LRRC47 | 1 | - |
| exon-exon | BAIAP2 | 17 | + | CAPZB | 1 | - |
| exon-intron | IGLC2 | 22 | + | IGL | 22 | + |
| exon-exon | GNAS | 20 | - | GNAS | 20 | + |
| exon-intron | RPL18 | 19 | - | RABGAP1L | 1 | - |
| intron-exon | MRPS2 | 9 | - | C9orf116 | | - |
| exon-intron | DAD1 | 14 | - | GAB1 | 4 | - |
| exon-exon | VEGFA | 6 | - | VEGFA | 6 | + |
| exon-exon | CNN3 | 1 | + | CNN3 | 1 | - |
| exon-exon | PLOD3 | 7 | + | PLOD3 | 7 | - |
| exon-exon | TNC | 9 | + | TNC | 9 | - |
| exon-exon | BAZ2B | 2 | + | BAZ2B | 2 | - |
| exon-exon | LOC101929331 | 9 | + | C1orf61 | 1 | - |
| exon-exon | SUGT1 | 13 | - | SUGT1 | 13 | + |
| exon-exon | SLC35E2A | 1 | - | SLC35E2B | 1 | - |
| exon-intron | RAD21 | 8 | - | WDR76 | 15 | + |
| exon-exon | ADGRG1 | 16 | + | ADGRG3 | 16 | + |
| exon-exon | WIPF2 | 17 | - | WIPF2 | 17 | + |
| exon-intron | BST2 | 19 | - | ZNF83 | 19 | + |
| exon-intron | GFAP | 17 | - | TTTY18 | | - |
| exon-exon | SRRM2 | 16 | + | LTF | 3 | - |
| exon-intron | ZNF285 | 19 | - | AC245748.1 | | - |
| exon-exon | ZDHHC17 | 12 | - | ZDHHC17 | 12 | + |
| exon-intron | ACTG1 | 17 | - | LINC00824 | 8 | - |
| exon-intron | COL6A1 | 21 | + | TRAPPC10 | 21 | - |
| intron-exon | CACNG8 | 19 | + | TRIM41 | 5 | + |
| intron-exon | LINC01505 | 9 | - | PPARD | 6 | + |
| exon-exon | WASH6P | | - | WASH4P | | - |
| exon-intron | ABHD16B | | - | AL118506.1 | | - |
| exon-exon | RUSF1 | 16 | - | SLC5A2 | 16 | - |
| intron-exon | BRD4 | 19 | + | BRD4 | 19 | - |
| exon-intron | KLF16 | | - | PACSIN2 | 22 | + |
| exon-exon | ZMAT3 | 3 | + | ZMAT3 | 3 | - |
| exon-exon | KDM3B | 5 | - | KDM3B | 5 | + |
| exon-exon | QKI | 6 | - | QKI | 6 | + |
| exon-exon | CRTAP | 3 | - | CRTAP | 3 | + |
| exon-exon | CAMTA1 | 1 | + | ERRFI1 | 1 | - |
| exon-intron | ATP6 | MT | - | RGPD2 | 2 | + |
| exon-exon | UBD | 6 | - | CSNK1D | 17 | - |
| intron-exon | MYHAS | 17 | + | MYH2 | 17 | - |
| exon-intron | HNRNPA1 | 12 | + | THORLNC | 2 | + |
| exon-exon | SYN3 | 22 | + | SYN3 | 22 | - |
| exon-intron | TNKS2 | 10 | - | GIT2 | 12 | - |
| exon-exon | ATP6V1C1 | 8 | + | ATP6V1C1 | 8 | - |
| intron-exon | CLPTM1L | 5 | + | SLC25A43 | X | + |
| exon-intron | FLT1 | 13 | - | CTNND1 | 11 | - |
| exon-exon | SLC35B2 | 6 | + | SLC35B2 | 6 | - |
| exon-exon | NEAT1 | 11 | - | CHD8 | 14 | + |
| exon-exon | ARHGAP5 | 14 | + | ND4 | MT | - |
| exon-exon | SFXN3 | 10 | - | SFXN3 | 10 | + |
| exon-intron | LARS1 | 5 | - | PIGBOS1 | 15 | - |
| intron-exon | WDR7 | 18 | + | XRCC5 | 2 | + |
| exon-intron | BRK1 | 3 | + | GRHL2 | 8 | - |
| exon-intron | AMER1 | X | - | CAMTA1 | 1 | - |
| exon-exon | ZNF875 | 19 | - | ZNF875 | 19 | + |
| exon-intron | ATP11C | X | + | TLCD5 | 11 | + |
| exon-exon | SIDT2 | 11 | + | SIDT2 | 11 | - |
| exon-exon | XPO6 | 16 | + | XPO6 | 16 | - |
| exon-exon | ARRDC3 | 5 | - | ARRDC3 | 5 | + |
| intron-exon | CTTN | 11 | + | ARMC5 | 16 | - |
| exon-intron | SPRR1B | 1 | + | UBASH3B | 11 | - |
| exon-exon | SPRR1B | 1 | - | RNA45SN3 | 21 | - |
| exon-exon | LYPLA1 | 8 | + | LYPLA1 | 8 | - |
| intron-exon | LAD1 | 1 | - | LOC105379524 | 1 | + |
| intron-exon | MFHAS1 | 8 | - | UBAP1 | 9 | + |
| intron-exon | ZCCHC24 | 10 | - | CHRDL2 | 11 | - |
| exon-exon | NUP210 | 3 | + | DMKN | 19 | + |
| intron-exon | CDH3 | 16 | - | ZNF608 | 5 | + |
| intron-exon | RNA18SP5 | 21 | - | RNA45SN2 | 21 | - |
| intron-exon | TRERF1 | 6 | - | HSPB8 | 12 | - |
| exon-intron | ASXL1 | 20 | - | FTX | X | + |
| intron-exon | JMJD1C | 10 | - | LOC107985137 | 18 | + |
| intron-exon | TMTC1 | 12 | - | AKAP13 | 15 | + |
| exon-intron | NOP14 | 4 | + | LOC107986940 | 8 | - |
| exon-exon | TARDBP | 1 | + | XRN2 | 20 | + |
| exon-intron | IGLV2-8 | 22 | + | IGLL5 | 22 | + |
| intron-exon | LOC105372561 | 20 | - | ST13 | 22 | - |
| exon-exon | PECAM1 | 17 | - | ANKRD12 | 18 | - |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | COL3A1 | 2 | - | FST | 5 | + |
| exon-exon | CORO2A | 9 | + | RNF38 | 9 | + |
| intron-exon | KANSL1 | 17 | - | CADPS2 | 7 | - |
| exon-intron | S100A16 | 1 | - | PDE4B | 1 | + |
| intron-exon | MSI2 | 17 | + | SAP130 | 2 | + |
| exon-exon | TNRC6C | 17 | + | PRRG3 | X | - |
| exon-exon | SFPQ | 1 | + | SFPQ | 1 | - |
| exon-intron | TSPAN2 | 1 | + | KLF7 | 2 | + |
| exon-exon | MRPL28 | 16 | + | PLAAT4 | 11 | + |
| exon-exon | POLDIP2 | 17 | + | SERBP1 | 1 | + |
| exon-exon | CXXC1 | 18 | + | CXXC1 | 18 | - |
| exon-exon | DPYSL2 | 8 | - | IWS1 | 2 | - |
| exon-exon | SRR | 17 | + | ND4 | MT | + |
| exon-exon | INS-IGF2 | 11 | + | FENDRR | 16 | - |
| exon-intron | YWHAQ | 2 | - | ENPP3 | 6 | - |
| intron-exon | LOC107984827 | 16 | + | GLG1 | 16 | + |
| exon-intron | ND5 | MT | + | PARGP1-AGAP4 | 10 | + |
| intron-exon | ANKS1B | 12 | + | MED12 | X | - |
| exon-exon | SLC25A3 | 12 | + | DCAF10 | 9 | + |
| exon-intron | MRO | 18 | - | SLC1A2 | 11 | + |
| exon-intron | POLR3D | 8 | - | UBR3 | 2 | - |
| intron-exon | TBC1D5 | 3 | - | GNAO1 | 16 | + |
| exon-intron | ATP6V0A1 | 17 | - | HLCS | 21 | - |
| intron-exon | EMX1 | 2 | - | LGALSL-DT | 2 | - |
| exon-intron | HS6ST1P1 | 1 | + | ARHGAP35 | 19 | - |
| intron-exon | PPP2R2C | 4 | - | TENM2 | 5 | + |
| exon-exon | AGBL5 | 2 | - | CHD5 | 1 | - |
| exon-exon | PTGES3L-AARSD1 | 17 | - | B3GNT4 | 12 | + |
| exon-exon | PEX5L | 3 | - | PEX5L | 3 | + |
| exon-exon | CSPG5 | 3 | + | MAG | 19 | - |
| exon-exon | SREBF1 | 17 | + | SREBF1 | 17 | - |
| exon-exon | PLEKHB1 | 11 | + | PLEKHB1 | 11 | - |
| exon-intron | LOC105372705 | 20 | - | APP | 21 | + |
| exon-exon | PABPC1 | 8 | - | PRXL2A | 10 | - |
| exon-intron | SMAP2 | 1 | + | CRACD | 4 | + |
| intron-exon | NRP1 | 10 | - | FBXL3 | 13 | - |
| exon-exon | ENGASE | 17 | - | ENGASE | 17 | + |
| exon-intron | TTC7B | 14 | - | LOC112268136 | 14 | - |
| exon-intron | SMURF2P1-LRRC37BP1 | 17 | + | COL18A1 | 21 | - |
| exon-exon | ZNF544 | 19 | - | ZNF544 | 19 | + |
| exon-intron | ND5 | MT | + | UTRN | 6 | - |
| intron-exon | PLCE1 | 10 | + | XPO7 | 8 | + |
| exon-intron | TTC7B | 14 | - | FTCDNL1 | 2 | + |
| exon-exon | GPM6B | X | - | SLC26A2 | 5 | + |
| exon-exon | AGO4 | 1 | - | AGO4 | 1 | + |
| exon-exon | SIN3A | 15 | + | ZNF577 | 19 | + |
| intron-exon | EXOC2 | 6 | + | LOC105379311 | 8 | - |
| intron-exon | MIR4713HG | 15 | + | CYP19A1 | 15 | - |
| exon-exon | ANP32E | 1 | - | FAM13A | 4 | - |
| intron-exon | OGDH | 7 | + | PAN3 | 13 | + |
| intron-exon | RP11-739N20.2 | 1 | + | EPG5 | 18 | + |
| intron-exon | DAPK1 | 9 | + | CSH1 | 17 | - |
| exon-intron | UXS1 | 2 | + | VTI1A | 10 | + |
| intron-exon | AKAP13 | 15 | + | USP47 | 11 | + |
| exon-intron | TMEM87B | 2 | - | SLC1A3 | 5 | - |
| exon-exon | TINAGL1 | 1 | + | TINAGL1 | 1 | - |
| exon-intron | ARF3 | 12 | + | LINC02133 | 16 | - |
| intron-exon | ARMCX5-GPRASP2 | X | + | INAFM2 | 15 | - |
| exon-exon | LRRFIP1 | 2 | + | LRRFIP1 | 2 | - |
| exon-exon | PSG2 | 19 | - | CALM1 | 14 | - |
| exon-exon | PLEKHA6 | 1 | + | SQSTM1 | 5 | + |
| intron-exon | CSGALNACT1 | 8 | + | PSG9 | 19 | - |
| exon-exon | CREB3L2 | 7 | + | PCM1 | 8 | - |
| intron-exon | CTBP2 | 10 | + | RNA45SN3 | 21 | + |
| exon-exon | NCAPD3 | 11 | + | VPS26B | 11 | + |
| intron-exon | PTPN2 | 18 | - | PPARGC1B | 5 | + |
| exon-exon | RPUSD4 | 11 | - | RPUSD4 | 11 | + |
| intron-exon | NPEPPSP1 | 17 | + | UHRF1BP1 | 6 | + |
| exon-intron | STARD9 | 15 | + | LRRC8D | 1 | - |
| exon-intron | ZNF407 | 18 | - | ATG7 | 3 | - |
| exon-intron | HNRNPUL2-BSCL2 | 11 | + | TACC2 | 10 | - |
| intron-exon | ENOSF1 | 18 | - | TRIM54 | 2 | - |
| intron-exon | ANKRD36B | 2 | - | KLK13 | 19 | - |
| intron-exon | PPP1R12B | 1 | + | ND4L | MT | + |
| intron-exon | DIP2C | 10 | + | IFNLR1 | 1 | - |
| exon-intron | LRRC29 | 16 | - | TMC5 | 16 | + |
| exon-exon | LOC283922 | 16 | - | LOC283922 | 16 | + |
| exon-exon | GSDMB | 17 | - | SUSD1 | 9 | + |
| exon-exon | PRPSAP2 | 17 | - | LFNG | 7 | + |
| exon-exon | YBX1P1 | 14 | + | EXOSC6 | 16 | + |
| exon-exon | SLC39A7 | 6 | - | SLC39A7 | 6 | + |
| exon-intron | RNA45SN1 | 21 | - | RNA18SP5 | 21 | + |
| intron-exon | ENTPD1 | 10 | + | IKZF1 | 7 | + |
| exon-exon | PGA5 | 11 | - | PGA4 | 11 | - |
| exon-intron | CTSD | 11 | + | LINC00475 | 9 | + |
| exon-exon | NOLC1 | 10 | - | BIVM-ERCC5 | 13 | + |
| exon-intron | RPS27A | 2 | + | LIPH | 3 | - |
| exon-exon | QDPR | 4 | - | DHX34 | 19 | - |
| intron-exon | BAZ2A | 12 | + | TBC1D12 | 10 | - |
| intron-exon | BAZ2A | 12 | + | TBC1D12 | 10 | - |
| intron-exon | MSI2 | 17 | - | PPP2R5E | 14 | - |
| exon-intron | SCCPDH | 1 | + | ARAP2 | 4 | - |
| exon-exon | TALAM1 | 11 | - | MALAT1 | 11 | - |
| exon-exon | ATP6 | MT | - | AXL | 19 | - |
| exon-exon | SERINC1 | 6 | + | SERINC1 | 6 | - |
| intron-exon | COL4A4 | 2 | + | VPS26B | 11 | + |
| intron-exon | TRERF1 | 6 | - | PCLO | 7 | + |
| intron-exon | CAPZB | 1 | - | CMTR1 | 6 | + |
| exon-exon | SMARCC2 | 12 | - | ZMYM3 | X | - |
| exon-exon | NUDC | 1 | - | FMNL1 | 17 | - |
| exon-exon | SPARC | 5 | + | CLMAT3 | 5 | + |
| exon-exon | MAGED2 | X | - | HNRNPDL | 4 | - |
| intron-exon | TMEM245 | 9 | - | SLC31A1 | 9 | - |
| intron-exon | KCNIP1 | 5 | + | SLC44A2 | 19 | + |
| intron-exon | AC025034.1 | 12 | - | HERC2P9 | 15 | + |
| intron-exon | AC025034.1 | 12 | - | HERC2P9 | 15 | + |
| intron-exon | RRP7A | 22 | - | UBA1 | X | + |
| exon-exon | NEAT1 | 11 | + | NEAT1 | 11 | - |
| exon-exon | ND2 | MT | - | KIAA1210 | X | - |
| exon-intron | ZFAND3 | 6 | + | TBC1D5 | 3 | - |
| intron-exon | CCDC171 | 9 | - | SARS1 | 1 | - |
| intron-exon | STX16-NPEPL1 | 20 | + | NEDD4L | 18 | - |
| exon-intron | HNRNPF | 10 | - | NCAM2 | 21 | + |
| exon-exon | PABPC4 | 1 | - | COL6A1 | 21 | - |
| exon-intron | XIST | X | + | ACTR3 | 2 | + |
| intron-exon | ZNF274 | 19 | - | ZNF274 | 19 | + |
| intron-exon | ASB3 | 2 | + | MTF1 | 1 | + |
| exon-exon | SLU7 | 5 | - | BCR | 22 | + |
| exon-exon | GABRE | X | + | GABRE | X | - |
| exon-exon | SRRM2 | 16 | - | EEF1G | 11 | + |
| intron-exon | TMEM182 | 2 | - | ADAMTS17 | 15 | - |
| exon-exon | TUBA1A | 12 | + | TUBA1C | 12 | + |
| exon-exon | TPT1 | 13 | + | NAA30 | 14 | + |
| exon-exon | CALR | 19 | + | ALDH1A1 | 9 | + |
| exon-exon | PMS2P5 | 7 | + | SPDYE10P | 7 | + |
| exon-intron | RPS8P8 | 5 | + | SNX14 | 6 | + |
| exon-exon | FTH1 | 11 | - | COX1 | MT | + |
| exon-exon | LRRN4 | 20 | - | CRLS1 | 20 | - |
| exon-exon | ZFP36L1 | 14 | + | TMED9 | 5 | + |
| intron-exon | OR2A1-AS1 | 7 | - | ATRX | X | + |
| intron-exon | AC117386.1 | 3 | - | LOC105374313 | 3 | - |
| exon-exon | CTSZ | 20 | + | COL1A1 | 17 | + |
| intron-exon | GPHN | 14 | + | PRSS23 | 11 | + |
| exon-exon | FTL | 19 | - | GTF2H5 | 6 | + |
| exon-exon | CCDC117 | 22 | + | UXT | X | + |
| exon-exon | N4BP2L1 | 13 | + | N4BP2L1 | 13 | - |
| intron-exon | ZNF790-AS1 | 19 | - | NDUFA10 | 2 | + |
| exon-exon | TMEM176B | 7 | + | TMEM176B | 7 | - |
| intron-exon | FP671120.1 | 21 | - | LMAN1 | 18 | - |
| exon-exon | ZNF503 | 10 | + | ZNF503 | 10 | - |
| exon-exon | SMAD5 | 5 | - | SMAD5 | 5 | + |
| exon-intron | ZBTB7A | 19 | + | BACE2 | 21 | + |
| exon-exon | MYL12B | 18 | - | MYL12A | 18 | - |
| exon-exon | MAP4K4 | 2 | - | PPM1A | 14 | - |
| exon-exon | TAGLN2 | 1 | + | GOLGA4 | 3 | - |
| exon-exon | DPP9 | 19 | + | ORAI3 | 16 | - |
| exon-exon | RBFA | 18 | - | NSD3 | 8 | + |
| exon-exon | ALDH1A1 | 9 | + | EPB41L4A | 5 | + |
| exon-exon | BGN | X | - | ADAMTS1 | 21 | + |
| intron-exon | CLN8 | 8 | + | TNRC6A | 16 | - |
| exon-exon | ARSD-AS1 | X | + | ARSD | X | + |
| exon-exon | C16orf95 | 16 | + | FBXO31 | 16 | + |
| intron-exon | DDAH1 | 1 | + | RNA45SN3 | 21 | - |
| exon-exon | PDAP1 | 7 | + | RNH1 | 11 | - |
| exon-exon | LINC01000 | 7 | - | CDIPT | 16 | - |
| exon-intron | LYN | 8 | - | ZNF548 | 19 | - |
| exon-exon | DNAJC4 | 11 | - | AAGAB | 15 | - |
| exon-exon | NOP53 | 19 | - | NACA | 12 | + |
| intron-exon | MET | 7 | - | RPL7L1 | 6 | - |
| intron-exon | PATZ1 | 22 | - | PIK3IP1 | 22 | - |
| intron-exon | LOC105376154 | 9 | + | FMOD | 1 | - |
| exon-intron | TNFRSF10B | 8 | + | STK40 | 1 | + |
| exon-intron | FTLP3 | 20 | - | EPHX2 | 8 | + |
| exon-intron | FBXO36P1 | 17 | + | AC145343.1 | 17 | + |
| exon-exon | RPS4X | X | + | RPS4X | X | - |
| exon-exon | FBXO25 | 8 | - | CGNL1 | 15 | - |
| intron-exon | RP11-114G22.1 | 12 | - | LOC107984516 | 12 | - |
| exon-exon | ATXN2 | 12 | + | USP9X | X | - |
| exon-exon | CHCHD4 | 3 | + | CAV1 | 7 | - |
| exon-exon | SERF2-C15ORF63 | 15 | - | CREB3L4 | 1 | + |
| exon-exon | PTGDS | 9 | - | RNA45SN1 | 21 | - |
| exon-exon | TBC1D17 | 19 | - | LOC112268284 | 21 | - |
| intron-exon | LOC105372666 | 20 | + | POLR2G | 11 | - |
| exon-exon | AMFR | 16 | - | AMFR | 16 | + |
| exon-intron | GPRC5A | 12 | + | GPRC5D-AS1 | 12 | + |
| intron-exon | ATP6V1C2 | 2 | + | PDIA6 | 2 | + |
| exon-intron | IER2 | 19 | - | UBA6-AS1 | 4 | - |
| exon-intron | PCSK7 | 11 | + | XPO6 | 16 | + |
| exon-intron | RBM8B | 14 | + | RBM8A | 1 | - |
| exon-intron | SIRT4 | 12 | + | RPS29 | 14 | - |
| exon-exon | ZNF90 | 19 | - | RPS16 | 19 | - |
| exon-exon | UFM1 | 13 | - | UFM1 | 13 | + |
| exon-exon | CIRBP | 19 | - | CIRBP | 19 | + |
| intron-exon | LOC105377885 | 6 | - | LOC105377884 | 6 | - |
| exon-exon | EIF4EBP2 | 10 | + | EIF4EBP2 | 10 | - |
| exon-exon | ACBD5 | 10 | + | SH3BP4 | 2 | + |
| exon-exon | TPGS1 | 19 | - | CHRNA3 | 15 | - |
| exon-exon | HSP90AA1 | 14 | + | ITGB1-DT | 10 | + |
| intron-exon | LOC390332 | 12 | + | ZBTB39 | 12 | + |
| exon-intron | TXNIP | 1 | + | DMD | X | + |
| exon-exon | MALAT1 | 11 | + | U2AF2 | 19 | + |
| exon-intron | FAM98B | 15 | - | PER2 | 2 | + |
| exon-intron | DOK3 | 5 | - | PDLIM7 | 5 | - |
| intron-exon | AC069234.1 | 12 | - | GATC | 12 | - |
| exon-exon | CRELD2 | 22 | - | P2RX4 | 12 | - |
| exon-exon | PPP6R2 | 22 | + | SBF1 | 22 | + |
| intron-exon | HGS | 17 | - | SIGIRR | 11 | + |
| exon-exon | LOC105371622 | 1 | - | RABGAP1L | 1 | - |
| intron-exon | AC006547.1 | 22 | - | TANGO2 | 22 | - |
| exon-intron | RBFOX2 | 22 | + | CHKB-CPT1B | 22 | + |
| exon-exon | ERGIC1 | 5 | - | ZZEF1 | 17 | + |
| exon-exon | SSRP1 | 11 | + | RANBP1 | 22 | + |
| exon-exon | RAD23A | 19 | - | ARF3 | 12 | + |
| intron-exon | DSG2-AS1 | 18 | - | GTF2E1 | 3 | - |
| intron-exon | SHLD2 | 10 | + | NUTM2A-AS1 | 10 | + |
| exon-exon | CD59 | 11 | - | CD59 | 11 | + |
| exon-intron | CUBN | 10 | + | TSTD3 | 6 | + |
| exon-exon | U2SURP | 3 | - | U2SURP | 3 | + |
| intron-exon | AC112250.2 | 4 | + | LOC105377321 | 4 | + |
| exon-intron | GNA12 | 7 | - | AMZ1 | 7 | - |
| exon-exon | SLC35E3 | 12 | - | ARCN1 | 11 | - |
| exon-exon | ZNF771 | 16 | - | LIMD2 | 17 | - |
| exon-exon | LINC01374 | 10 | - | LINC00865 | 10 | - |
| intron-exon | BCL2L13 | 22 | - | MON1B | 16 | - |
| exon-intron | GTPBP10 | 7 | - | SEC61A2 | 10 | - |
| exon-intron | DOK3 | 5 | + | ACACA | 17 | + |
| intron-exon | MYOM2 | 8 | - | PIP5K1B | 9 | - |
| exon-exon | AFMID | 17 | - | DNAJC5G | 2 | - |
| intron-exon | CTD-2528L19.4 | 19 | + | KRAS | 12 | + |
| exon-exon | GPAT2 | 2 | - | FAHD2CP | 2 | - |
| exon-exon | CASTOR3 | 7 | + | POLR2D | 2 | + |
| intron-exon | IGKC | 2 | + | TTC19 | 17 | - |
| exon-exon | POLR2A | 17 | + | POLR2A | 17 | - |
| intron-exon | PIGK | 1 | - | PRR3 | 6 | - |
| exon-exon | RPL7AP27 | 4 | + | CRTC3 | 15 | + |
| exon-exon | RPL7P9 | 1 | + | NEU1 | 6 | - |
| exon-exon | RUSC1-AS1 | 1 | - | ATP13A2 | 1 | + |
| exon-exon | PPP3CC | 8 | + | PSD3 | 8 | - |
| exon-intron | DLG5-AS1 | 10 | - | DLG5 | 10 | - |
| exon-exon | CDS1 | 4 | - | CDS1 | 4 | + |
| exon-exon | ATP5MC2P4 | X | + | RNA45SN1 | 21 | - |
| intron-exon | LINS1 | 15 | + | CNOT9 | 2 | - |
| intron-exon | MROH1 | 8 | - | DBI | 2 | - |
| exon-intron | SAFB | 19 | + | KIF13B | 8 | + |
| exon-intron | ND2 | MT | - | CYP4B1 | 1 | - |
| exon-intron | LMOD1 | 1 | - | AL513217.1 | 1 | - |
| exon-exon | PSMD11 | 17 | - | LINC02731 | 11 | + |
| exon-exon | EEF1D | 8 | + | EEF1D | 8 | - |
| exon-exon | ADCY2 | 5 | - | EEF1G | 11 | + |
| exon-exon | APLP2 | 11 | - | ATP6 | MT | + |
| exon-exon | USP14 | 18 | - | USP14 | 18 | + |
| exon-exon | EMILIN1 | 2 | - | EMILIN1 | 2 | + |
| intron-exon | RBM25 | 14 | + | UNC5B | 10 | + |
| exon-exon | RPS6 | 9 | + | GANAB | 11 | - |
| exon-exon | DIPK2A | 3 | + | LOC105374140 | 3 | + |
| exon-exon | NKAIN1 | 1 | - | PUM1 | 1 | - |
| exon-intron | OIP5-AS1 | 15 | + | RPAP1 | 15 | + |
| intron-exon | C17orf99 | 17 | - | AP4M1 | 7 | + |
| exon-exon | EIF1AD | 11 | + | EIF1AD | 11 | - |
| exon-intron | DNAH9 | 17 | - | SHISA6 | 17 | - |
| exon-exon | TJP1 | 15 | + | TJP1 | 15 | - |
| exon-intron | TMEM184C | 4 | - | TASOR2 | 10 | - |
| exon-exon | WSB1 | 17 | - | CHCHD2P2 | 5 | + |
| exon-intron | GDF1 | 19 | + | CERS1 | 19 | + |
| intron-exon | RUFY2 | 10 | - | EPHX1 | 1 | + |
| intron-exon | LOC100506076 | 2 | - | DHRS4-AS1 | 14 | + |
| exon-exon | VAT1 | 17 | + | MPST | 22 | + |
| exon-exon | NPM1P46 | 2 | + | NPM1P46 | 2 | - |
| intron-exon | UBAP1 | 9 | - | RHBDD2 | 7 | + |
| exon-intron | VIM | 10 | + | LOC101928688 | 7 | + |
| exon-intron | CLU | 8 | - | BUD23 | 7 | - |
| intron-exon | B3GALT5-AS1 | 21 | - | STOM | 9 | - |
| exon-intron | LGALS1 | 22 | + | BTBD1 | 15 | + |
| exon-intron | EIF3CL | 16 | + | EIF3CL | 16 | - |
| exon-exon | MEGF11 | 15 | + | MEGF11 | 15 | - |
| exon-exon | VAMP1 | 12 | - | NSUN5P2 | 7 | - |
| exon-intron | VEGFC | 4 | - | LOC107985706 | Y | - |
| exon-intron | RPLP2 | 11 | + | NIPSNAP1 | 22 | + |
| exon-intron | CTSD | 11 | - | POM121C | 7 | + |
| exon-exon | RPL23AP42 | 3 | - | ASCL1 | | + |
| exon-exon | CD24 | 6 | - | MEGF11 | 15 | - |
| exon-exon | BZW1 | 2 | - | BZW1 | 2 | + |
| exon-exon | PLEKHA6 | 1 | + | PLEKHA6 | 1 | - |
| exon-exon | TKT | 3 | + | TKT | 3 | - |
| exon-exon | CACUL1 | 10 | + | CACUL1 | 10 | - |
| exon-exon | KAT7 | 17 | - | NXF1 | 11 | - |
| exon-intron | NUBP1 | | + | NCOA6 | 20 | - |
| exon-exon | HIF1A | 14 | + | SNAPC1 | 14 | + |
| exon-exon | ANXA2 | 15 | - | ICE2 | 15 | - |
| exon-exon | MTA2 | 11 | - | PTMAP4 | 12 | - |
| intron-exon | IPMK | 10 | + | CISD1 | 10 | + |
| exon-exon | UBR7 | 14 | - | GON7 | 14 | - |
| exon-intron | NCL | 2 | - | CDH12 | 5 | + |
| exon-exon | VIM | 10 | + | SERINC3 | 20 | - |
| exon-intron | GAPDH | 12 | + | LOC105373177 | | - |
| exon-exon | TPGS2 | 18 | - | FHOD3 | 18 | - |
| intron-exon | DIPK1A | 1 | - | RPL5 | 1 | - |
| exon-exon | KRT7-AS | 12 | - | KRT7 | 12 | - |
| exon-exon | CRIPT | 2 | + | NRAS | 1 | - |
| exon-intron | COX1 | MT | + | TRNS1 | MT | + |
| exon-intron | IRGQ | 19 | - | KAT7 | 17 | + |
| exon-exon | COX1 | MT | + | MIR12136 | 1 | + |
| exon-intron | RNF181 | 2 | + | CCDC130 | 19 | + |
| exon-exon | ZNF343 | 20 | - | NCOA6 | 20 | - |
| exon-intron | SNAR-E | | - | LOC105379062 | | - |
| intron-exon | AC013463.2 | 2 | + | SCN3A | 2 | + |
| exon-intron | RPS4XP5 | 2 | - | WDPCP | 2 | - |
| intron-exon | PLCL2 | 3 | + | GET1-SH3BGR | 21 | + |
| intron-exon | MRPS33 | 7 | - | YBX3 | 12 | - |
| exon-exon | MEF2C | 5 | - | ND4 | MT | + |
| intron-exon | IFI6 | 1 | - | SERINC1 | 6 | - |
| exon-exon | MALAT1 | 11 | + | CCNI | 4 | - |
| exon-intron | ND4L | MT | + | ND4 | MT | + |
| exon-exon | MYL2 | 12 | - | TSPYL1 | 6 | - |
| exon-intron | DDX54 | 12 | + | CUX1 | 7 | - |
| exon-exon | TEP1 | 14 | - | TEP1 | 14 | + |
| exon-exon | CTSZ | 20 | - | NR4A1 | 12 | + |
| exon-exon | PBX2 | 6 | + | DERA | 12 | - |
| exon-intron | EGF | 4 | - | PSMC4 | 19 | - |
| intron-exon | PKNOX2 | 11 | + | LDAH | 2 | + |
| intron-exon | LOC110121311 | 10 | - | WNT8B | 10 | - |
| exon-exon | B2M | 15 | - | B2M | 15 | + |
| intron-exon | CPM | 12 | + | MYORG | 9 | + |
| exon-exon | GATA2-AS1 | 3 | - | NPEPPSP1 | 17 | + |
| exon-exon | LENG1 | 19 | - | CNOT3 | 19 | - |
| exon-intron | ANXA2 | 15 | + | MTHFD1 | 14 | - |
| intron-exon | LOC102723945 | 16 | - | NCL | 2 | + |
| exon-intron | HTATSF1P2 | 6 | - | LOC101927759 | 6 | - |
| intron-exon | ARMC9 | 2 | - | NUP107 | 12 | - |
| exon-exon | FTH1 | 11 | + | LOC399900 | 11 | + |
| exon-intron | SCN11A | 3 | + | ZCCHC14 | 16 | + |
| exon-intron | NPY1R | 4 | + | ANKRD17 | 4 | + |
| exon-exon | DNPH1 | 6 | - | DNPH1 | 6 | + |
| exon-intron | KCNQ3 | 8 | + | EVI5 | 1 | + |
| exon-exon | LOC101927414 | 4 | + | LOC105377444 | 4 | + |
| intron-exon | ZNF277 | 7 | + | LOC105375456 | 7 | + |
| exon-intron | KNOP1 | 16 | + | VPS35L | 16 | + |
| exon-exon | GALT | 9 | - | UBE2V1P13 | 1 | - |
| exon-exon | RSAD2 | 2 | - | MTMR12 | 5 | + |
| exon-exon | C8orf37 | 8 | + | C8orf37 | 8 | - |
| intron-exon | PPP2R5D | 6 | + | MEA1 | 6 | + |
| exon-exon | ZNF8-ERVK3-1 | 19 | + | LOC105372480 | 19 | + |
| exon-exon | PATZ1 | 22 | + | WDR25 | 14 | - |
| exon-exon | RNA45SN1 | 21 | + | GTF2E2 | 8 | - |
| intron-exon | LOC107988032 | X | + | C2CD3 | 11 | + |
| intron-exon | LOC105374370 | 4 | + | LINC02447 | 4 | + |
| exon-intron | MYO1G | | - | TMTC2 | 12 | - |
| exon-intron | IGHA1 | 14 | - | IGH | 14 | - |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-exon | MARCKSL1 | 1 | + | MARCKSL1 | 1 | - |
| exon-intron | RPL29 | 3 | - | NSD2 | 4 | - |
| exon-intron | RPL10P9 | 5 | + | MEAK7 | | + |
| exon-intron | PPIA | 7 | + | CACNA1A | 19 | - |
| intron-exon | RNU6-6P | 10 | + | ITM2B | 13 | + |
| intron-exon | HEATR5B | 2 | - | MRPL27 | 17 | - |
| intron-exon | GPR75-ASB3 | 2 | - | ASB3 | 2 | - |
| intron-exon | KRT18P55 | | + | TMEM97 | 17 | + |
| exon-exon | NF2 | 22 | + | NF2 | 22 | - |
| exon-exon | CDKL3 | 5 | + | UBE2B | 5 | + |
| exon-intron | MXRA7P1 | 2 | - | PSMD14 | 2 | - |
| exon-exon | BOLA2-SMG1P6 | 16 | - | SMG1P6 | 16 | - |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-exon | U2SURP | 3 | + | PLSCR1 | 3 | - |
| exon-exon | THG1L | 5 | + | PLEKHA1 | 10 | + |
| intron-exon | FHOD3 | | + | UBQLN2 | X | + |
| exon-exon | HNRNPA2B1 | 7 | - | MAN2B2 | 4 | + |
| exon-exon | POFUT1 | 20 | + | SGO1 | 3 | - |
| exon-exon | RNU6-5P | 2 | - | TMED5 | 1 | - |
| intron-exon | AL109659.1 | | - | MALAT1 | 11 | + |
| exon-exon | AURKAIP1 | 1 | - | KAT6B | 10 | + |
| exon-intron | IFITM3 | 11 | - | PARGP1-AGAP4 | 10 | + |
| exon-exon | TCF7 | 5 | + | TOR1AIP2 | 1 | - |
| exon-exon | RCC1 | 1 | + | TMEM167A | 5 | - |
| exon-exon | MYL1 | 2 | - | TGFBR2 | 3 | + |
| exon-intron | ND4L | MT | + | ND4 | MT | + |
| exon-exon | ANK1 | 8 | - | HNRNPA1L2 | 13 | + |
| exon-exon | FBXO11 | 2 | + | LOC100506235 | 2 | + |
| intron-exon | CSRP3-AS1 | | - | CSRP3 | | - |
| exon-intron | CDK16 | X | + | AOPEP | 9 | + |
| exon-exon | ATP2A2 | 12 | - | ATP2A2 | 12 | + |
| exon-exon | PRNP | 20 | + | LOC100507516 | 8 | - |
| exon-intron | LOC105374808 | | + | LOC102724497 | | + |
| exon-exon | PART1 | 5 | + | MALAT1 | 11 | + |
| intron-exon | NECTIN3 | 3 | - | NECTIN3-AS1 | 3 | - |
| exon-exon | CTNND1 | 11 | + | PCAT4 | | + |
| intron-exon | BAZ1A | 14 | + | FAM177A1 | 14 | + |
| exon-intron | PRIMPOL | 4 | + | TRAPPC10 | 21 | - |
| exon-intron | TAGLN | 11 | + | CLSTN2 | 3 | + |
| exon-intron | OST4 | 2 | - | LINC00378 | 13 | - |
| exon-exon | ILK | 11 | + | COX3 | MT | + |
| exon-exon | LOC442028 | 2 | - | ANKRD20A8P | | - |
| exon-exon | CRADD | 12 | + | LOC105369913 | | + |
| intron-exon | KLK3 | 19 | + | MALAT1 | 11 | + |
| exon-exon | HNRNPA3P6 | 3 | + | TMEM106C | 12 | + |
| intron-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-exon | MRPL51 | 12 | - | SRSF5 | 14 | + |
| intron-exon | BMPR1A | 10 | + | KLK2 | 19 | + |
| exon-intron | SEMG1 | 20 | + | JMJD1C | 10 | - |
| exon-exon | SLC25A6 | Y | + | SLC25A6 | X | - |
| intron-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-exon | MSMB | 10 | - | NDUFC2-KCTD14 | 11 | - |
| exon-intron | OST4 | 2 | - | LOC105372130 | | - |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-intron | RACK1 | 5 | - | EFCAB6 | 22 | - |
| exon-intron | ND4L | MT | + | ND4 | MT | + |
| intron-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-intron | RPS20 | 8 | - | ADAP2 | 17 | + |
| exon-intron | AZGP1P1 | 7 | + | LOC100128334 | | + |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-intron | COX7A2 | 6 | - | FANCA | 16 | + |
| intron-exon | ZBTB47 | | + | ND1 | MT | + |
| intron-exon | ZNF680 | 7 | + | KIAA1958 | 9 | + |
| exon-intron | ELOVL5 | 6 | - | KLHL15 | X | + |
| exon-exon | BDH1 | 3 | - | UBR3 | 2 | + |
| exon-exon | CDC26 | 9 | - | LOC107987119 | 9 | - |
| exon-intron | ZCCHC17 | 1 | + | TTC1 | 5 | - |
| exon-intron | CPA2 | | + | WWOX | 16 | - |
| exon-intron | CDK11A | 1 | - | CDK11B | 1 | - |
| exon-exon | KLK3 | 19 | + | MALAT1 | 11 | + |
| exon-exon | ZNF765-ZNF761 | 19 | + | ZNF761 | 19 | + |
| exon-intron | LSM5 | | - | AC090809.1 | | - |
| exon-intron | LDHB | 12 | - | LOC101927400 | | + |
| exon-intron | FOXP4 | | + | FBLN1 | 22 | + |
| exon-intron | RPL7A | 9 | - | MIR924HG | | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | EHD2 | 19 | - | EHD2 | 19 | + |
| exon-intron | NDUFB2 | 7 | + | PTCH2 | 1 | + |
| exon-exon | PYM1 | 12 | - | PYM1 | 12 | + |
| exon-intron | FTH1 | 11 | - | SCHLAP1 | 2 | - |
| exon-exon | RPSAP18 | | + | RPSA | 3 | + |
| exon-exon | ZCCHC10 | | + | ZCCHC10 | 5 | - |
| exon-intron | LSM14A | 19 | + | DCTN2 | 12 | - |
| exon-intron | BANF1P3 | | - | CAB39 | 2 | - |
| exon-intron | PFDN5 | 12 | + | VPS13B | 8 | - |
| exon-intron | NXPE3 | 3 | + | NFKBIZ | 3 | + |
| exon-intron | PCNPP3 | 12 | + | AC090023.2 | 12 | + |
| exon-intron | MCRIP1 | | - | CACNA1A | 19 | - |
| exon-intron | RPL10AP6 | 3 | - | PTPRG | 3 | - |
| exon-exon | LGALS1 | 22 | + | HSP90AB1 | 6 | + |
| exon-exon | S100A10 | 1 | + | CTSZ | 20 | + |
| intron-exon | LOC100129148 | 7 | - | ZC3HAV1L | 7 | - |
| exon-intron | LINC00622 | | - | SLC9A8 | 20 | + |
| exon-exon | PAG1 | 8 | - | STYX | 14 | + |
| exon-exon | ZKSCAN1 | 7 | + | CEBPZOS | 2 | + |
| exon-exon | FGD5-AS1 | 3 | - | ARCN1 | 11 | + |
| exon-intron | FAM87B | | - | LOC101928626 | 1 | - |
| exon-intron | LOC107984384 | 11 | - | RP11-708B6.2 | | - |
| intron-exon | GINS3 | | + | ADGRG6 | 6 | + |
| exon-exon | AMPD1 | 1 | - | DENND2C | | - |
| exon-exon | ND4L | MT | + | ND4 | MT | + |
| intron-exon | ANKRD36 | 2 | + | MATR3 | 5 | + |
| exon-exon | CKM | 19 | - | MYOZ2 | 4 | + |
| exon-intron | SNX4 | 3 | - | TYK2 | 19 | + |
| exon-exon | ALDOA | 16 | + | PDHA1 | X | + |
| exon-exon | COX4I1 | 16 | + | ND2 | MT | + |
| intron-exon | TECR | 19 | + | OR7C1 | 19 | + |
| intron-exon | MYG1 | 12 | - | MYG1-AS1 | 12 | - |
| exon-exon | TUBA1A | 12 | - | TUBA1B | 12 | - |
| intron-exon | POLR1E | | + | F2RL1 | | + |
| exon-intron | IFITM3 | 11 | - | STRBP | | + |
| exon-exon | RNU6-3P | X | - | EIF4G1 | 3 | + |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-exon | RTL1 | 14 | - | ZNF664 | 12 | + |
| exon-intron | PMS2P7 | 7 | + | PMS2P6 | 7 | + |
| exon-intron | ETV4 | 17 | - | B3GALT1-AS1 | 2 | + |
| intron-exon | PPP1R10 | 6 | - | PLEKHA1 | 10 | + |
| exon-exon | SYNC | 1 | - | RBBP4 | 1 | + |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-intron | DCTN6 | 8 | + | TRIOBP | 22 | + |
| exon-exon | SERF2-C15ORF63 | 15 | + | RPL21P16 | 10 | - |
| intron-exon | ESD | 13 | - | CALM2 | 2 | - |
| exon-exon | COX3 | MT | - | ATP6 | MT | - |
| exon-exon | SERPINF1 | 17 | + | YWHAG | 7 | - |
| intron-exon | LINC-PINT | 7 | + | LINC00513 | | + |
| exon-exon | VPS29 | 12 | - | FAM216A | | - |
| exon-exon | MINDY1 | 1 | - | ANXA9 | 1 | - |
| intron-exon | JAK1 | 1 | - | SLC4A5 | 2 | - |
| intron-exon | WASF3 | 13 | + | NCAPD2 | 12 | + |
| exon-exon | WDR59 | | - | HMGB1 | 13 | - |
| exon-exon | RNA45SN3 | 21 | + | ADM | 11 | + |
| exon-intron | RPL23AP42 | 3 | - | LINC02067 | 3 | - |
| exon-exon | TEF | 22 | + | CRYAB | 11 | - |
| intron-exon | LOC112268284 | 21 | - | TRAPPC3 | 1 | - |
| exon-intron | USP11 | X | - | LOC107984660 | 14 | + |
| exon-exon | PLD6 | 17 | + | TNS1 | 2 | - |
| exon-intron | GRINA | 8 | + | DGKG | 3 | + |
| exon-intron | H3-3B | 17 | + | ZDHHC3 | 3 | + |
| exon-exon | SMARCE1 | 17 | + | PIP4K2B | 17 | - |
| exon-exon | SERPINA1 | 14 | - | TMEM123 | 11 | - |
| exon-intron | CYCS | 7 | - | C3orf86 | 3 | - |
| exon-exon | MYH9 | 22 | + | MYH9 | 22 | - |
| exon-exon | TMEM33 | 4 | - | STAG3L5P-PVRIG2P-PILRB | 7 | - |
| exon-intron | RCN1 | 11 | - | BMPR1A | 10 | + |
| intron-exon | NUDCD3 | 7 | - | ACTG1 | 17 | + |
| exon-intron | TOMM5 | 9 | - | LOC105372121 | 18 | - |
| exon-exon | PSAP | 10 | + | PSAP | 10 | - |
| exon-exon | SMG6 | 17 | + | TNRC6A | 16 | - |
| exon-exon | DBNDD1 | 16 | - | NAA60 | 16 | + |
| exon-exon | EIF4G1 | 3 | - | EIF4G1 | 3 | + |
| intron-exon | WNK4 | 17 | + | ND4 | MT | - |
| exon-exon | NNAT | 20 | + | RSU1 | 10 | - |
| exon-intron | ACTN4 | 19 | + | PUM1 | 1 | + |
| exon-intron | STX5 | 11 | - | CFLAR | 2 | - |
| exon-exon | KANSL3 | 2 | - | ITPKB | 1 | + |
| exon-exon | RAPGEFL1 | 17 | - | RAPGEFL1 | 17 | + |
| exon-intron | PPP1R15A | 19 | + | SUZ12P1 | 17 | + |
| exon-intron | KRT13 | 17 | + | MINDY2 | 15 | - |
| exon-intron | MDM4 | 1 | - | COL17A1 | 10 | - |
| exon-intron | FAM133B | 7 | + | ZSWIM3 | 20 | - |
| exon-intron | CDV3 | 3 | - | ZNF148 | 3 | + |
| intron-exon | RBL2 | 16 | - | PPP2R5A | 1 | + |
| exon-exon | F11-AS1 | 4 | + | F11-AS1 | 4 | - |
| exon-exon | SEC24A | 5 | - | MTR | 1 | - |
| exon-intron | TSG101 | 11 | + | N4BP2L2 | 13 | + |
| exon-intron | IQCG | 3 | - | RNR2 | MT | + |
| intron-exon | LOC105371084 | 16 | + | HPGD | 4 | - |
| intron-exon | LRRC74A | 14 | + | ND1 | MT | - |
| intron-exon | PHC3 | 3 | + | HSP90AB1 | 6 | - |
| exon-exon | GTF3C2 | 2 | + | GTF3C2 | 2 | - |
| exon-exon | SLC12A9 | 7 | + | EGFR | 7 | + |
| exon-exon | RPS10-NUDT3 | 6 | - | CHD3 | 17 | - |
| intron-exon | PNKD | 2 | + | LTBP4 | 19 | - |
| exon-intron | MARCKSL1 | 1 | - | MHENCR | 20 | + |
| exon-exon | ALOX15B | 17 | + | CAPNS1 | 19 | + |
| exon-exon | BMP1 | 8 | - | MALL | 2 | + |
| exon-exon | APBB3 | 5 | - | APBB3 | 5 | + |
| intron-exon | TTTY14 | Y | - | EIF2AK1 | 7 | - |
| exon-exon | EIF2AK3 | 2 | - | EIF2AK3 | 2 | + |
| exon-exon | CALML3-AS1 | 10 | + | EIF2AK1 | 7 | - |
| intron-exon | MECOM | 3 | - | DNAJC7 | 17 | + |
| intron-exon | HLA-F-AS1 | 6 | - | TSC1 | 9 | + |
| intron-exon | GABBR2 | 9 | - | TPD52L1 | 6 | - |
| exon-intron | SPNS1 | 16 | + | RP11-499F3.2 | 15 | - |
| exon-exon | AMOTL1 | 11 | - | PPIF | 10 | - |
| exon-intron | COL6A3 | 2 | + | BBC3 | 19 | - |
| exon-exon | COL6A1 | 21 | - | LENG8 | 19 | - |
| exon-exon | SRSF4 | 1 | + | TLE5 | 19 | - |
| exon-exon | BCL9L | 11 | + | PIP5K1C | 19 | - |
| exon-exon | NEAT1 | 11 | - | PLEC | 8 | + |
| exon-exon | RPS20 | 8 | + | UNC50 | 2 | + |
| exon-exon | RING1 | 6 | - | RING1 | 6 | + |
| exon-intron | ATP6 | MT | - | MTATP6P1 | 1 | + |
| intron-exon | CNN1 | 19 | - | TG | 8 | + |
| exon-intron | PYGO1 | 15 | - | RNA28SP | 21 | + |
| exon-exon | PCSK2 | 20 | - | LINC01278 | X | - |
| intron-exon | RUVBL1 | 3 | + | FCGBP | 19 | + |
| intron-exon | RREB1 | 6 | - | CIRBP-AS1 | 19 | - |
| intron-exon | FAAH2 | X | + | MAP4 | 3 | - |
| exon-exon | DIPK1B | 9 | + | DIPK1B | 9 | - |
| exon-intron | TRAK1 | 3 | - | PLEKHH1 | 14 | - |
| exon-intron | ARHGEF39 | 9 | - | ATP6V1G2-DDX39B | 6 | - |
| exon-exon | RNA45SN2 | 21 | + | EGR1 | 5 | + |
| exon-exon | MAP7D3 | X | + | RPS6 | 9 | - |
| intron-exon | SHLD1 | 20 | + | CIAO2A | 15 | - |
| exon-intron | LMAN2 | 5 | - | PLEKHM3 | 2 | - |
| exon-exon | VPS13D | 1 | - | PITPNB | 22 | - |
| exon-intron | RTN3 | 11 | - | PICALM | 11 | + |
| intron-exon | OSGEP | 14 | - | CLU | 8 | + |
| intron-exon | RBM33 | 7 | - | FLNB | 3 | + |
| intron-exon | RPS29 | 14 | - | CTSB | 8 | - |
| exon-intron | NOL6 | 9 | - | CORO7-PAM16 | 16 | + |
| exon-exon | TRIB1 | 8 | - | TRIB1 | 8 | + |
| exon-intron | TPM3P5 | 19 | - | NBDY | X | + |
| intron-exon | VGLL4 | 3 | - | ND4 | MT | + |
| exon-exon | DR1 | 1 | - | EML6 | 2 | + |
| exon-exon | LAMTOR4 | 7 | - | LAMTOR4 | 7 | + |
| exon-exon | MOB3A | 19 | + | RNA45SN3 | 21 | + |
| exon-exon | USP9X | X | + | SARNP | 12 | - |
| exon-intron | FOSL2 | 2 | - | CLPTM1L | 5 | - |
| exon-intron | SEC63 | 6 | - | DPYD | 1 | - |
| exon-intron | LDHA | 11 | - | NFE2L3 | 7 | + |
| exon-intron | RUNDC1 | 17 | - | PPP1R37 | 19 | - |
| intron-exon | SPIRE2 | 16 | + | PMF1-BGLAP | 1 | + |
| exon-exon | PRKCSH | 19 | - | MEF2A | 15 | + |
| intron-exon | RNR2 | MT | - | PTDSS1 | 8 | - |
| exon-exon | C1QTNF1 | 17 | - | RNA45SN1 | 21 | - |
| exon-exon | DCTN2 | 12 | + | DCTN2 | 12 | - |
| exon-exon | IRF3 | 19 | - | MALAT1 | 11 | + |
| exon-exon | SCRN1 | 7 | + | MALAT1 | 11 | + |
| exon-exon | COL6A2 | 21 | - | COL6A2 | 21 | + |
| exon-exon | RABIF | 1 | + | ZNF969P | 4 | - |
| exon-exon | SLC39A1 | 1 | - | BLK | 8 | + |
| exon-exon | KYAT1 | 9 | + | KYAT1 | 9 | - |
| exon-exon | RNA45SN2 | 21 | + | ACP2 | 11 | - |
| exon-intron | C12orf65 | 12 | - | TMEM106C | 12 | - |
| exon-exon | RAB1A | 2 | + | KRT19 | 17 | - |
| exon-exon | CEACAM6 | 19 | + | ZNF37A | 10 | + |
| exon-exon | CYTB | MT | + | ND5 | MT | + |
| exon-exon | GATAD2A | 19 | + | C19orf71 | 19 | + |
| intron-exon | MECP2 | X | - | RNA45SN1 | 21 | + |
| intron-exon | MYOF | 10 | + | NOTUM | 17 | - |
| exon-exon | UBA1 | X | + | UBA1 | X | - |
| exon-exon | UBE2K | 4 | + | LSM12P1 | 8 | - |
| intron-exon | LOC105371098 | 16 | - | PIGG | 4 | + |
| exon-intron | MINDY1 | 1 | - | RBKS | 2 | + |
| exon-exon | TMCO3 | 13 | - | MPDU1 | 17 | - |
| exon-exon | NDUFV1 | 11 | + | RPL23AP57 | 9 | + |
| exon-exon | MAT2A | 2 | - | GSS | 20 | + |
| exon-exon | CDK2AP2 | 11 | + | CDK2AP2 | 11 | - |
| exon-intron | POSTN | 13 | + | GON4L | 1 | - |
| exon-exon | HSPA4L | 4 | - | DSP | 6 | + |
| intron-exon | NADK2 | 5 | - | TPRN | 9 | + |
| exon-exon | ND4 | MT | + | CYTB | MT | + |
| exon-intron | SERP1 | 3 | - | PPP1CB | 2 | + |
| exon-intron | EIF2A | 3 | - | EIF2A | 3 | + |
| exon-exon | RPL28 | 19 | + | RPL28 | 19 | - |
| exon-intron | PDHB | 3 | + | RUFY3 | 4 | + |
| exon-exon | ANKRD12 | 18 | - | ANKRD12 | 18 | + |
| intron-exon | UFC1 | 1 | - | AKAP9 | 7 | - |
| exon-exon | CCND1 | 11 | + | GMFB | 14 | + |
| exon-intron | RPS6KA5 | 14 | + | CA5BP1 | X | - |
| intron-exon | TNRC18 | 7 | + | IL32 | 16 | - |
| exon-exon | TGM2 | 20 | + | TGM2 | 20 | - |
| exon-exon | RASA2 | 3 | + | RASA2 | 3 | - |
| exon-intron | UBXN7 | 3 | - | ANKRD30A | 10 | + |
| exon-exon | CD44 | 11 | - | SLC4A2 | 7 | - |
| exon-exon | MTA2 | 11 | - | MTA2 | 11 | + |
| exon-exon | DCAF10 | 9 | - | BAG3 | 10 | + |
| exon-exon | MARCKSL1 | 1 | - | MARCKSL1 | 1 | + |
| exon-exon | HSPA8 | 11 | + | RAB18 | 10 | + |
| exon-exon | RB1CC1 | 8 | + | TAGLN2 | 1 | + |
| exon-exon | RNF114 | 20 | + | EZR | 6 | + |
| exon-intron | H1-0 | 22 | + | SLC20A2 | 8 | - |
| exon-intron | H1-0 | 22 | + | SLC20A2 | 8 | - |
| exon-intron | C18orf25 | 18 | + | NDRG1 | 8 | - |
| exon-intron | NEAT1 | 11 | - | TBC1D5 | 3 | + |
| exon-exon | PTPRA | 20 | - | YTHDF2 | 1 | + |
| exon-exon | CYFIP1 | 15 | + | UBR4 | 1 | + |
| intron-exon | RNA28SP | 21 | - | RNA45SN2 | 21 | - |
| intron-exon | RUVBL1 | 3 | - | SEC61A1 | 3 | + |
| exon-exon | LOC646347 | 1 | - | CXADR | 21 | - |
| exon-exon | SMCR8 | 17 | - | CYTB | MT | + |
| exon-exon | UQCR11 | 19 | + | UQCR11 | 19 | - |
| exon-intron | LRRFIP1 | 2 | - | KCNMB3 | 3 | - |
| exon-exon | RNA45SN3 | 21 | - | LSS | 21 | + |
| exon-intron | PSMB1 | 6 | - | LOC101929667 | 2 | + |
| exon-intron | PCID2 | 13 | - | TRPS1 | 8 | + |
| exon-exon | RGPD5 | 2 | + | ABL2 | 1 | + |
| exon-intron | TTN | 2 | - | TTN-AS1 | 2 | + |
| exon-intron | GTPBP10 | 7 | - | LOC105370113 | 13 | - |
| exon-intron | ANKRD36B | 2 | - | PTPRK | 6 | + |
| intron-exon | BBOX1 | 11 | + | KLK7 | 19 | + |
| intron-exon | AL592429.2 | 6 | + | H2AZ2 | 7 | - |
| intron-exon | FHL2 | 2 | + | UBC | 12 | - |
| exon-intron | WFDC2 | 20 | + | ADD1 | 4 | + |
| exon-intron | MALAT1 | 11 | + | PLCL1 | 2 | + |
| exon-exon | UTRN | 6 | - | CKAP4 | 12 | + |
| exon-exon | CASC3 | 17 | - | CTDSP1 | 2 | - |
| exon-exon | PRR14L | 22 | - | H1-10 | 3 | + |
| exon-exon | GMPPB | 3 | + | GMPPB | 3 | - |
| intron-exon | CIT | 12 | - | MSN | X | + |
| exon-exon | ATP6V0E1 | 5 | + | PAFAH1B1 | 17 | - |
| exon-exon | TWF1 | 12 | - | LAPTM4A | 2 | - |
| intron-exon | LOC100131626 | 11 | - | ATP5MG | 11 | + |
| exon-exon | CDK9 | 9 | - | CDK9 | 9 | + |
| intron-exon | RBM47 | 4 | + | SEC31A | 4 | + |
| intron-exon | NOTCH2NLR | 1 | - | OTULIN | 5 | - |
| intron-exon | ARHGAP22 | 10 | - | PARP9 | 3 | - |
| intron-exon | SELENBP1 | 1 | + | SELENBP1 | 1 | - |
| exon-intron | SH2B3 | 12 | + | SH2B3 | 12 | - |
| exon-intron | SIRT5 | 6 | - | SIRT5 | 6 | + |
| exon-exon | CAPZA1 | 1 | + | CAPZA1 | 1 | - |
| intron-exon | LOXL3 | 2 | + | SIPA1L1 | 14 | - |
| exon-exon | MGAM2 | 7 | - | ADIPOR2 | 12 | + |
| exon-exon | CSDE1 | 1 | - | CSDE1 | 1 | + |
| intron-exon | PACS1 | 11 | + | DNAJC11 | 1 | - |
| exon-intron | HNRNPC | 14 | + | DLG2 | 11 | - |
| exon-intron | RPS2 | 16 | + | RPS2P7 | 20 | - |
| exon-intron | CDCA5 | 11 | - | GDPD4 | 11 | + |
| exon-intron | SKP1 | 5 | - | LOC107985675 | X | + |
| exon-intron | TTLL3 | 3 | + | ITGB6 | 2 | + |
| exon-exon | LARS1 | 5 | + | WAPL | 10 | - |
| intron-exon | UBR3 | 2 | + | RABGAP1 | 9 | + |
| exon-exon | EIF3A | 10 | + | LRRFIP1 | 2 | - |
| exon-exon | PGR-AS1 | 11 | + | IGHV3-49 | 14 | - |
| exon-intron | GPATCH2L | 14 | - | RNR1 | MT | - |
| exon-exon | CDC42SE1 | 1 | - | VPS39 | 15 | + |
| exon-exon | ZFAND6 | 15 | + | AAK1 | 2 | - |
| exon-exon | CXADR | 21 | - | MAP3K2 | 2 | + |
| exon-intron | BSG | 19 | + | WWOX | 16 | - |
| exon-exon | PTGES3 | 12 | + | NUCB2 | 11 | + |
| exon-intron | SCGB2A2 | 11 | - | MICOS10 | 1 | + |
| exon-exon | ELF1 | 13 | + | PKM | 15 | - |
| intron-exon | SSRP1 | 11 | + | EIF3M | 11 | + |
| exon-intron | TEAD1 | 11 | + | WDR41 | 5 | + |
| exon-intron | DCBLD2 | 3 | + | ROCK2 | 2 | + |
| exon-intron | MALAT1 | 11 | + | TRIM2 | 4 | + |
| exon-intron | ZNF460 | 19 | - | MET | 7 | - |
| exon-intron | C1QBP | 17 | - | CDC73 | 1 | - |
| exon-intron | CHPF2 | 7 | + | IRS2 | 13 | + |
| exon-exon | PCOLCE-AS1 | 7 | - | RBFOX2 | 22 | - |
| exon-intron | RNA45SN1 | 21 | - | XKR9 | 8 | + |
| intron-exon | LOC105377294 | 4 | - | GAPDH | 12 | - |
| exon-intron | NDUFB8 | 10 | - | ACTR3C | 7 | - |
| intron-exon | UQCC1 | 20 | - | HNRNPA3 | 2 | + |
| intron-exon | YWHAZ | 8 | - | ACTL6A | 3 | - |
| exon-exon | COX1 | MT | - | MAFK | 7 | + |
| exon-exon | PARP4 | 13 | + | TALAM1 | 11 | - |
| exon-exon | CSPP1 | 8 | + | HSP90AB1 | 6 | - |
| exon-exon | PLPP2 | 19 | + | ATP6 | MT | + |
| exon-exon | SPIRE1 | 18 | + | CYTB | MT | + |
| exon-intron | MOB1A | 2 | + | LOC100133315 | 11 | + |
| exon-exon | NOTCH2NLC | 1 | + | ANKRD46 | 8 | - |
| exon-intron | THOC6 | 16 | + | AL445242.1 | 13 | + |
| exon-exon | SUPT5H | 19 | - | CTSB | 8 | + |
| exon-exon | KCNQ1 | 11 | + | CBX5 | 12 | + |
| exon-exon | AGPS | 2 | - | RNA45SN3 | 21 | + |
| exon-exon | NAA50 | 3 | + | FTH1P8 | X | + |
| exon-exon | ND4 | MT | + | NOLC1 | 10 | + |
| exon-exon | ND4 | MT | - | CARD19 | 9 | + |
| exon-intron | NCBP3 | 17 | + | NCBP3 | 17 | - |
| exon-intron | SF3A2 | 19 | - | AK2 | 1 | + |
| exon-intron | PNN | 14 | + | TPTEP2-CSNK1E | 22 | + |
| exon-exon | BRPF1 | 3 | + | RNA45SN3 | 21 | - |
| exon-intron | NCBP2 | 3 | + | LOC101928012 | 7 | - |
| exon-exon | RAD23B | 9 | - | GSN | 9 | - |
| exon-exon | MSRB1 | 16 | + | BCAS3 | 17 | + |
| intron-exon | EEF1DP1 | 19 | + | SPRY2 | 13 | - |
| exon-exon | EXOC7 | 17 | - | NAP1L1 | 12 | - |
| intron-exon | GGCT | 7 | - | GGCT | 7 | + |
| exon-intron | APEH | 3 | - | TSEN2 | 3 | + |
| exon-exon | ND5 | MT | + | RNA45SN1 | 21 | + |
| exon-exon | SSR1 | 6 | + | NOTCH2 | 1 | - |
| exon-exon | HSD17B10 | X | + | APEX1 | 14 | + |
| exon-intron | PMS2P9 | 7 | - | PMS2P6 | 7 | + |
| exon-intron | DYNC1H1 | 14 | + | SLAIN2 | 4 | + |
| exon-exon | VAC14 | 16 | + | CENPT | 16 | + |
| exon-exon | IGFBP4 | 17 | - | TNKS1BP1 | 11 | + |
| exon-exon | SH3GL1 | 19 | + | ARGLU1 | 13 | + |
| exon-intron | CEACAM5 | 19 | + | RNPEPL1 | 2 | + |
| intron-exon | TTYH3 | 7 | - | ING1 | 13 | - |
| exon-exon | PLPPR2 | 19 | - | RPS16 | 19 | - |
| exon-intron | THOC6 | 16 | - | PCBP2 | 12 | + |
| exon-intron | SRRM1P1 | 8 | - | CNNM3 | 2 | - |
| exon-exon | MGST1 | 12 | + | RNA45SN2 | 21 | - |
| exon-exon | LOC646762 | 7 | + | NIT2 | 3 | - |
| exon-exon | CLDN4 | 7 | + | GLT8D1 | 3 | + |
| exon-exon | CALB1 | 8 | - | ICMT | 1 | - |
| intron-exon | ROR1 | 1 | - | MUC12 | 7 | + |
| exon-intron | PHF10 | 6 | - | FGD1 | X | - |
| exon-exon | GLG1 | 16 | + | GLG1 | 16 | - |
| exon-exon | RNA45SN1 | 21 | - | H4C15 | 1 | - |
| exon-exon | ST14 | 11 | - | SCIMP | 17 | - |
| intron-exon | DOP1B | 21 | + | GTF2IP4 | 7 | + |
| exon-exon | NCOR2 | 12 | - | PAXIP1 | 7 | - |
| exon-exon | INTS1 | 7 | + | INTS1 | 7 | - |
| exon-exon | ATP6 | MT | + | MME | 3 | - |
| exon-intron | URB1 | 21 | - | LINC02649 | 10 | + |
| intron-exon | GRB2 | 17 | + | PA2G4 | 12 | + |
| exon-exon | TBC1D4 | 13 | + | TALAM1 | 11 | - |
| exon-intron | GRAP2 | 22 | - | CREBBP | 16 | + |
| intron-exon | RPS6KA3 | X | + | LOC112268199 | 17 | - |
| intron-exon | PDE3A | 12 | + | MUC12 | 7 | - |
| intron-exon | LINC02086 | 17 | - | PEX11B | 1 | - |
| exon-exon | MUC1 | 1 | + | MUC1 | 1 | - |
| exon-intron | PTBP3 | 9 | + | CD58 | 1 | + |
| intron-exon | TMEM140 | 7 | + | CYREN | 7 | - |
| exon-intron | RNA45SN3 | 21 | + | NDE1 | 16 | + |
| exon-intron | PIGR | 1 | - | HIVEP2 | 6 | + |
| exon-intron | ARID1A | 1 | + | ARID1A | 1 | - |
| exon-intron | RAB7A | 3 | - | LOC105375724 | 8 | + |
| intron-exon | ADAMTS9-AS2 | 3 | + | DST | 6 | + |
| exon-exon | MKI67 | 10 | + | ND4 | MT | + |
| exon-intron | CHRNB2 | 1 | + | DELE1 | 5 | - |
| exon-intron | ZNF805 | 19 | - | TMEM156 | 4 | - |
| exon-exon | CASK | X | + | CASK | X | - |
| exon-exon | SREBF2-AS1 | 22 | - | CCDC134 | 22 | + |
| exon-exon | COP1 | 1 | + | HEPH | X | + |
| exon-exon | FNBP4 | 11 | - | NAP1L1 | 12 | - |
| exon-exon | CEACAM5 | 19 | - | RBM6 | 3 | + |
| exon-intron | CTC-338M12.4 | 5 | + | ME3 | 11 | + |
| intron-exon | LINC02284 | 14 | - | GUK1 | 1 | - |
| exon-exon | XPO6 | 16 | - | XPO6 | 16 | + |
| exon-exon | FGFR4 | 5 | - | ABL1 | 9 | + |
| exon-intron | AREG | 4 | - | SPPL3 | 12 | + |
| exon-exon | CNPY3 | 6 | - | RBCK1 | 20 | + |
| intron-exon | GCNT1 | 9 | + | LITAF | 16 | - |
| exon-exon | MSMO1 | 4 | - | MSMO1 | 4 | + |
| exon-exon | SLCO4A1 | 20 | - | GCDH | 19 | - |
| exon-exon | ELF2 | 4 | + | TJP1 | 15 | - |
| exon-exon | KRT8 | 12 | - | ARHGEF34P | 7 | - |
| exon-exon | DCXR | 17 | + | DCXR | 17 | - |
| exon-exon | EEF2 | 19 | + | EEF2 | 19 | - |
| intron-exon | ZC3H18 | 16 | - | RACK1 | 5 | - |
| intron-exon | OSBPL10 | 3 | + | RNA45SN3 | 21 | + |
| exon-exon | KTN1 | 14 | - | MECP2 | X | - |
| exon-exon | PEG10 | 7 | - | RNA45SN1 | 21 | + |
| exon-exon | ND4 | MT | + | PCM1 | 8 | - |
| exon-exon | RPSAP58 | 19 | - | TUBA1B | 12 | + |
| intron-exon | DOK7 | 4 | + | CYTB | MT | - |
| exon-intron | SKIV2L | 6 | + | ZNF56 | 19 | + |
| exon-exon | PSMB5 | 14 | + | PSMB5 | 14 | - |
| exon-exon | APEX2 | X | - | APEX2 | X | + |
| intron-exon | ADAP1 | 7 | - | ATN1 | 12 | - |
| intron-exon | NDRG4 | 16 | + | RNA45SN1 | 21 | + |
| exon-exon | ND4 | MT | - | RNA45SN2 | 21 | - |
| exon-exon | GTF2IP12 | 4 | + | DUS1L | 17 | - |
| intron-exon | PTK2 | 8 | + | COX1 | MT | + |
| exon-exon | RNA45SN2 | 21 | - | GAA | 17 | + |
| intron-exon | NRF1 | 7 | - | SLC7A5 | 16 | - |
| exon-intron | ACTN1 | 14 | + | PARGP1-AGAP4 | 10 | - |
| intron-exon | RNF165 | 18 | + | NUDCD3 | 7 | + |
| exon-exon | HNRNPUL1 | 19 | - | HNRNPUL1 | 19 | + |
| exon-exon | COX1 | MT | - | MYRF | 11 | + |
| intron-exon | LENG8 | 19 | - | NDUFA8 | 9 | - |
| intron-exon | NME1-NME2 | 17 | - | LRP5 | 11 | + |
| exon-exon | WDR1 | 4 | - | WDR1 | 4 | + |
| intron-exon | XRRA1 | 11 | - | CCAR2 | 8 | + |
| intron-exon | SYBU | 8 | - | RBM23 | 14 | - |
| exon-intron | KMT2D | 12 | + | LINC00342 | 2 | + |
| exon-exon | HSPA5 | 9 | + | SF3A2 | 19 | + |
| exon-exon | MGRN1 | 16 | - | PXN | 12 | + |
| exon-intron | BSG | 19 | + | FBXL19 | 16 | + |
| exon-exon | MAP1LC3A | 20 | - | RNA45SN1 | 21 | + |
| exon-intron | G3BP2 | 4 | - | COP1 | 1 | - |
| exon-exon | ERRFI1 | 1 | + | RAN | 12 | - |
| intron-exon | DDX11-AS1 | 12 | + | CLTC | 17 | - |
| exon-intron | PDIA4 | 7 | - | LOC107984336 | 11 | + |
| exon-intron | RBM39 | 20 | + | WASF2 | 1 | - |
| exon-exon | RNA45SN3 | 21 | - | RPTOR | 17 | + |
| intron-exon | AARS1 | 16 | + | ITPR3 | 6 | + |
| intron-exon | HLA-B | 6 | + | NFE2L1 | 17 | + |
| exon-exon | ZNF343 | 20 | + | ND6 | MT | + |
| exon-exon | YWHAG | 7 | + | EEF1DP1 | 19 | + |
| exon-exon | TOR1AIP2 | 1 | + | MKNK2 | 19 | - |
| exon-exon | UBE2J2 | 1 | - | PRDX2 | 19 | + |
| intron-exon | INCA1 | 17 | - | RC3H2 | 9 | - |
| exon-intron | BRD2 | 6 | - | DAP3 | 1 | + |
| exon-exon | EP400 | 12 | - | UCP2 | 11 | - |
| exon-exon | S100A13 | 1 | - | ACTG1 | 17 | - |
| intron-exon | GART | 21 | + | FCHO2 | 5 | + |
| intron-exon | PRDX1 | 1 | - | WDR59 | 16 | - |
| exon-intron | KDM4B | 19 | + | WASH6P | X | + |
| intron-exon | LOC100507373 | 19 | + | TIMM50 | 19 | - |
| exon-intron | RPS2 | 16 | + | PIWIL4 | 11 | + |
| exon-intron | DNAJC5 | 20 | - | RNR2 | MT | + |
| exon-intron | ASPH | 8 | - | PPFIBP2 | 11 | + |
| intron-exon | AXIN1 | 16 | + | CEMIP2 | 9 | + |
| exon-exon | HNRNPA1L2 | 13 | + | ZNF207 | 17 | + |
| intron-exon | RNR1 | MT | + | BLOC1S5-TXNDC5 | 6 | - |
| exon-intron | ITPR3 | 6 | - | SETD5 | 3 | + |
| exon-exon | SMG7 | 1 | - | CSNK2A1 | 20 | - |
| intron-exon | PDE8B | 5 | - | ZBED3-AS1 | 5 | - |
| exon-intron | ACSS2 | 20 | + | AMBRA1 | 11 | + |
| intron-exon | ACTN1 | 14 | - | FLOT2 | 17 | - |
| exon-intron | ILVBL | 19 | + | CLSTN3 | 12 | - |
| exon-intron | ZFYVE16 | 5 | - | LGR5 | 12 | - |
| exon-intron | MEF2D | 1 | - | ZC3H3 | 8 | - |
| exon-exon | ILVBL | 19 | - | ILVBL | 19 | + |
| exon-exon | RPS4X | X | + | RNA45SN2 | 21 | + |
| intron-exon | PRR5-ARHGAP8 | 22 | - | GTPBP4 | 10 | - |
| exon-exon | SLC29A3 | 10 | - | ATF7 | 12 | - |
| exon-exon | PTPRK | 6 | + | COX3 | MT | + |
| exon-exon | TMEM184B | 22 | + | EEF1DP1 | 19 | + |
| exon-exon | RPL35 | 9 | + | PTPN23 | 3 | + |
| exon-exon | VPS51 | 11 | - | ATP6 | MT | + |
| exon-exon | EIF4G1 | 3 | - | ND4 | MT | - |
| exon-exon | RNA5S10 | 1 | + | MYRF | 11 | + |
| intron-exon | LOC100131626 | 11 | - | ATP5MG | 11 | + |
| exon-intron | ND3 | MT | + | ZNF341 | 20 | + |
| intron-exon | TLK2 | 17 | - | RAB11A | 15 | + |
| exon-exon | LOXL1 | 15 | + | ATP6 | MT | - |
| exon-intron | CLIP2 | 7 | - | PYGB | 20 | - |
| intron-exon | AFAP1 | 4 | - | SIN3A | 15 | - |
| exon-exon | PARP6 | 15 | + | RNA45SN1 | 21 | + |
| exon-exon | ATP6 | MT | - | HK1 | 10 | + |
| exon-exon | EEF1D | 8 | + | RPS14 | 5 | - |
| intron-exon | B3GNTL1 | 17 | + | PKM | 15 | - |
| exon-exon | RRAS | 19 | + | SLC16A3 | 17 | + |
| exon-exon | CTDP1 | 18 | + | TGFB1 | 19 | + |
| intron-exon | RNR1 | MT | - | SLC6A9 | 1 | - |
| intron-exon | RNA18SP5 | 21 | - | ATP6 | MT | + |
| exon-intron | CYP1A1 | 15 | + | RNR2 | MT | + |
| exon-intron | PTPN3 | 9 | + | SHOC2 | 10 | + |
| exon-exon | FOXK2 | 17 | - | CAD | 2 | + |
| exon-exon | SLC6A20 | 3 | + | ZNF574 | 19 | - |
| exon-exon | RPL28 | 19 | + | RPL28 | 19 | - |
| exon-exon | ARF5 | 7 | + | ARF5 | 7 | - |
| exon-exon | SQSTM1 | 5 | + | HSD17B8 | 6 | + |
| exon-intron | PDIA5 | 3 | - | LOC102724250 | 1 | - |
| exon-exon | LOC112694756 | 16 | - | LOC112694756 | 16 | + |
| exon-exon | RALY | 20 | - | NBDY | X | + |
| exon-exon | RNA45SN3 | 21 | - | TMBIM6 | 12 | + |
| exon-exon | CHD6 | 20 | + | PKM | 15 | - |
| exon-intron | FTL | 19 | - | RNR2 | MT | + |
| exon-exon | HPS4 | 22 | + | DVL3 | 3 | + |
| exon-intron | PHB2 | 12 | + | SMAD3 | 15 | + |
| exon-exon | RNA45SN2 | 21 | + | EWSR1 | 22 | + |
| exon-exon | EPB41L1 | 20 | + | EPB41L1 | 20 | - |
| exon-exon | MRPS5 | 2 | - | STAT1 | 2 | - |
| exon-exon | TXLNA | 1 | - | FBRSL1 | 12 | + |
| exon-exon | INTS1 | 7 | + | TMC4 | 19 | - |
| exon-exon | CCNJL | 5 | - | PLAT | 8 | - |
| exon-exon | RNA45SN2 | 21 | - | POLR2C | 16 | - |
| exon-intron | RBFOX2 | 22 | + | MED16 | 19 | - |
| exon-exon | SLC3A2 | 11 | - | GSK3A | 19 | - |
| exon-exon | AARS2 | 6 | + | MT1A | 16 | + |
| exon-intron | MMP24-AS1-EDEM2 | 20 | + | MMP24-AS1-EDEM2 | 20 | - |
| intron-exon | SLC45A4 | 8 | + | FANCA | 16 | - |
| exon-exon | PMS2P9 | 7 | - | DTX2P1-UPK3BP1-PMS2P11 | 7 | - |
| exon-exon | WDR1 | 4 | - | WDR1 | 4 | + |
| exon-exon | RPSAP58 | 19 | + | TUBB4B | 9 | + |
| exon-exon | IKBKB | 8 | - | RPS17 | 15 | + |
| exon-exon | RFFL | 17 | - | PRELID2 | 5 | + |
| exon-exon | BCAP31 | X | - | PRPF6 | 20 | + |
| intron-exon | UBC | 12 | + | MYC | 8 | + |
| exon-intron | OSBPL8 | 12 | - | ZMYM4 | 1 | - |
| intron-exon | DYNC1H1 | 14 | + | LOC105369517 | 11 | - |
| exon-exon | FAAH | 1 | + | FAAH | 1 | - |
| exon-intron | YBX1P1 | 14 | - | SOCS5 | 2 | - |
| exon-intron | ZC3H13 | 13 | + | ASPH | 8 | + |
| intron-exon | PCBP3 | 21 | - | RNA45SN2 | 21 | + |
| exon-exon | ZNF8-ERVK3-1 | 19 | - | ACTN4 | 19 | - |
| exon-exon | ILRUN | 6 | - | LINC02384 | 12 | - |
| exon-intron | KRT35 | 17 | - | KRT43P | 17 | + |
| exon-exon | RNA45SN3 | 21 | - | NEAT1 | 11 | + |
| exon-intron | BCLAF1 | 6 | - | MYO1E | 15 | - |
| exon-intron | KCNMB1 | 5 | - | KCNIP1 | 5 | + |
| exon-exon | CSRP1 | 1 | - | CD9 | 12 | + |
| exon-exon | MECOM | 3 | + | FCGBP | 19 | + |
| exon-exon | MUC12 | 7 | - | PRDM8 | 4 | - |
| intron-exon | PITPNC1 | 17 | - | RNA45SN3 | 21 | + |
| exon-intron | COX2 | MT | - | TPP2 | 13 | + |
| exon-exon | RNA45SN3 | 21 | - | DAP | 5 | + |
| exon-exon | HCFC1 | X | + | MARF1 | 16 | + |
| exon-exon | EIF3D | 22 | + | PSMD13 | 11 | + |
| exon-exon | CDK16 | X | + | CILP | 15 | - |
| exon-exon | HSPA1B | 6 | + | HSPA1A | 6 | - |
| exon-intron | PHYKPL | 5 | + | LOC105373836 | 2 | - |
| exon-intron | SHPK | 17 | - | TRPV1 | 17 | - |
| intron-exon | CNTNAP2 | 7 | - | WDR60 | 7 | - |
| intron-exon | SORBS3 | 8 | - | CYC1 | 8 | - |
| exon-exon | LOC107986588 | 6 | + | KRT18 | 12 | + |
| exon-exon | SMOX | 20 | + | SMOX | 20 | - |
| exon-exon | NOP2 | 12 | - | SNHG14 | 15 | - |
| exon-intron | DENND3 | 8 | - | AC004080.1 | 7 | - |
| exon-exon | IRF6 | 1 | - | IRF6 | 1 | + |
| exon-intron | CYTB | MT | - | AGAP1 | 2 | + |
| exon-exon | MCM5 | 22 | - | PI4KA | 22 | - |
| exon-exon | IGHG1 | 14 | + | RBM47 | 4 | - |
| exon-intron | CHD4 | 12 | + | STT3A-AS1 | 11 | - |
| exon-intron | MRTFA | 22 | - | CD9 | 12 | - |
| exon-intron | ACTA1 | 1 | - | KCNQ5 | 6 | + |
| intron-exon | SNW1 | 14 | + | EIF4B | 12 | - |
| intron-exon | PDE8A | 15 | - | IPO5 | 13 | - |
| exon-intron | COL1A1 | 17 | + | SPSB2 | 12 | + |
| intron-exon | C9orf24 | 9 | - | SLC23A2 | 20 | - |
| exon-exon | ARL5A | 2 | + | ACTB | 7 | + |
| exon-intron | MTA3 | 2 | - | MTATP6P1 | 1 | - |
| exon-intron | PHC2 | 1 | - | HSF2BP | 21 | + |
| exon-intron | LCAT | 16 | - | GFOD2 | 16 | - |
| intron-exon | ROR2 | 9 | + | ADGRG1 | 16 | - |
| exon-exon | CAMK1D | 10 | - | MSN | X | - |
| exon-exon | KRT6B | 12 | + | KRT6A | 12 | + |
| exon-exon | PPP2R2A | 8 | - | GEMIN2 | 14 | - |
| exon-exon | DNASE1L1 | X | + | IGHG1 | 14 | + |
| exon-exon | MPZL1 | 1 | - | MPZL1 | 1 | + |
| exon-exon | SUMF2 | 7 | - | TBC1D1 | 4 | - |
| intron-exon | TTTY14 | Y | + | TPM3 | 1 | - |
| intron-exon | KNDC1 | 10 | - | EIF1P3 | 1 | + |
| exon-exon | NMRAL1 | 16 | - | ZNF512B | 20 | - |
| exon-exon | MST1R | 3 | - | SIPA1L3 | 19 | + |
| exon-intron | PHF8 | X | - | BCL11A | 2 | - |
| intron-exon | KCNQ2 | 20 | - | COL1A2 | 7 | + |
| exon-intron | AARS1 | 16 | + | ABR | 17 | + |
| exon-exon | SBDS | 7 | - | POLE3 | 9 | - |
| intron-exon | LOC107985342 | 19 | - | MXD1 | 2 | + |
| exon-exon | DENND2B | 11 | - | GPT2 | 16 | - |
| intron-exon | PDLIM5 | 4 | - | UBQLN1 | 9 | - |
| exon-exon | TRPV6 | 7 | - | GPR78 | 4 | - |
| exon-intron | PTPN11 | 12 | - | AC007207.2 | 12 | + |
| intron-exon | TNPO3 | 7 | + | FN1 | 2 | - |
| intron-exon | RNA18SP5 | 21 | - | TTC28-AS1 | 22 | + |
| exon-exon | NAT10 | 11 | + | RNA45SN1 | 21 | + |
| exon-exon | ND2 | MT | - | PRICKLE1 | 12 | - |
| intron-exon | LOC105379403 | 4 | + | FBXO21 | 12 | - |
| intron-exon | CNNM2 | 10 | - | RNA45SN1 | 21 | + |
| exon-intron | MSL2 | 3 | + | FBXO9 | 6 | + |
| intron-exon | YAE1 | 7 | + | ZNF208 | 19 | - |
| exon-intron | GALM | 2 | - | LOC105376917 | 19 | - |
| exon-intron | MT1XP1 | 1 | + | FBXO42 | 1 | + |
| exon-exon | PRPF19 | 11 | + | PRPF19 | 11 | - |
| exon-intron | TRIP10 | 19 | - | PIK3R6 | 17 | - |
| intron-exon | RIOK3 | 18 | - | PFKP | 10 | - |
| exon-intron | NDUFB9 | 8 | - | TATDN1 | 8 | - |
| intron-exon | LOC101930100 | 21 | + | ATP6 | MT | + |
| exon-exon | RAF1 | 3 | - | MKRN2 | 3 | - |
| exon-exon | MYL1 | 2 | - | CASQ1 | | + |
| exon-exon | ATP2A2 | 12 | + | CAVIN4 | 9 | + |
| exon-exon | MTERF4 | 2 | - | TPM3 | 1 | - |
| intron-exon | DOCK1 | 10 | + | COX1 | MT | + |
| exon-exon | ATP2A1 | | + | MALAT1 | 11 | + |
| exon-exon | CEBPZ | 2 | - | COX1 | MT | + |
| exon-exon | ACSS1 | 20 | - | ZNF131 | 5 | + |
| exon-exon | PRKAR2B | 7 | - | PRKAR2B | 7 | + |
| exon-intron | LIMD1 | | + | CCDC88C | 14 | + |
| exon-intron | RRM2 | 2 | + | NBAS | 2 | + |
| exon-intron | HARS1 | 5 | - | AL445242.1 | 13 | + |
| exon-intron | CPD | 17 | + | SUPT5H | 19 | - |
| exon-exon | COX1 | MT | + | MIR12136 | 1 | + |
| exon-exon | EFNB3 | | - | EFNB3 | 17 | + |
| exon-exon | MDH2 | 7 | - | MDH2 | 7 | + |
| intron-exon | IGH | 14 | + | CDK12 | 17 | + |
| exon-exon | CDCA7 | 2 | - | CDCA7 | 2 | + |
| intron-exon | RBM6 | 3 | + | FOXJ3 | 1 | - |
| exon-intron | RPL23AP53 | 8 | - | LINC00266-4P | | - |
| exon-intron | USF2 | 19 | + | SOX5 | | + |
| intron-exon | SNRNP70 | 19 | + | EIF2S3 | X | + |
| intron-exon | IGH | 14 | - | IGHM | 14 | - |
| exon-intron | RPL35 | 9 | - | LINC02055 | 8 | - |
| exon-intron | RPS5 | 19 | + | MAGI1 | 3 | + |
| exon-intron | GMPSP1 | 4 | + | DDX11-AS1 | 12 | - |
| exon-exon | RPUSD1 | 16 | + | ITGB4 | 17 | + |
| exon-intron | H2AW | 1 | - | GPR39 | 2 | + |
| exon-intron | UBAP2L | 1 | - | KIAA1614 | 1 | - |
| exon-intron | SEM1 | 7 | + | LOC105379048 | 5 | + |
| intron-exon | CHD3 | 17 | + | PHLPP2 | 16 | + |
| exon-intron | NRDE2 | 14 | - | PSMC1 | 14 | - |
| exon-exon | PKM | 15 | + | SQLE | 8 | + |
| exon-exon | ZMYND19 | 9 | + | PXN | 12 | - |
| exon-exon | RNA45SN2 | 21 | - | RPL3P4 | 14 | + |
| exon-exon | HLA-A | 6 | - | ACTB | 7 | - |
| exon-intron | DKC1 | X | - | GCH1 | 14 | - |
| exon-exon | ITGB4 | 17 | + | RNA45SN2 | 21 | - |
| exon-intron | EMC10 | 19 | - | LOC102724832 | 4 | - |
| exon-exon | R3HDM1 | 2 | + | YTHDC1 | 4 | - |
| exon-exon | CHMP1A | 16 | + | CHMP1A | 16 | - |
| exon-exon | ZNF530 | 19 | - | ZNF530 | 19 | + |
| exon-exon | COX3 | MT | - | RNF44 | 5 | - |
| exon-exon | RAB11FIP2 | 10 | + | RAB11FIP2 | 10 | - |
| intron-exon | SLC26A8 | 6 | + | ZKSCAN5 | 7 | - |
| intron-exon | TUBA1C | 12 | + | TUBA1B | 12 | + |
| exon-exon | COX1 | MT | - | SNHG22 | 18 | + |
| exon-intron | CACYBP | 1 | - | EXOC4 | 7 | - |
| exon-exon | MEN1 | 11 | + | ATP5MC2 | 12 | - |
| exon-exon | GTF2F1 | 19 | + | TCOF1 | 5 | - |
| exon-exon | PROSER1 | 13 | + | TCOF1 | 5 | + |
| exon-intron | ND4 | MT | + | ABHD17A | 19 | - |
| exon-exon | MAB21L4 | 2 | - | RAD23A | 19 | + |
| exon-intron | TMEM63C | 14 | + | CCDC57 | 17 | + |
| exon-intron | TMEM189-UBE2V1 | 20 | + | PARP6 | 15 | - |
| intron-exon | LTBP3 | 11 | + | PKD1P1 | 16 | - |
| intron-exon | ASMTL-AS1 | Y | + | PES1 | 22 | - |
| intron-exon | EDC3 | 15 | + | RACK1 | 5 | - |
| exon-exon | TMX1 | 14 | + | TMX1 | 14 | - |
| exon-exon | CTSB | 8 | - | PCYT1A | 3 | - |
| exon-exon | SUOX | 12 | - | CCNL1 | 3 | + |
| exon-exon | EIF3E | 8 | + | PRSS23 | 11 | - |
| exon-exon | RPS3AP6 | 15 | - | HNRNPF | 10 | + |
| exon-intron | RAB27B | 18 | + | AATF | 17 | - |
| exon-exon | EFCAB13 | 17 | - | TTC12 | 11 | - |
| intron-exon | STAT6 | 12 | + | LMAN1 | 18 | - |
| exon-exon | PTPRA | 20 | - | PDIA4 | 7 | - |
| intron-exon | DHRS12 | 13 | + | LYAR | 4 | + |
| intron-exon | RNR2 | MT | - | USH1C | 11 | - |
| intron-exon | ZNF503 | 10 | - | ESRP2 | 16 | - |
| exon-intron | ATP6 | MT | - | DHRS3 | 1 | - |
| exon-exon | SLCO4A1 | 20 | + | SLCO4A1-AS1 | 20 | - |
| exon-exon | MRC2 | 17 | + | MRC2 | 17 | - |
| exon-exon | SAR1A | 10 | + | RPL18A | 19 | + |
| exon-exon | HSP90AA1 | 14 | - | HSP90AA1 | 14 | + |
| exon-exon | SP1 | 12 | - | SP1 | 12 | + |
| exon-exon | MED1 | 17 | - | LOC102723728 | 16 | + |
| exon-intron | RPS2 | 16 | - | C10orf99 | 10 | - |
| exon-exon | HNRNPA2B1 | 7 | - | AATF | 17 | + |
| exon-intron | GMIP | 19 | + | SLC6A9 | 1 | - |
| exon-exon | RBCK1 | 20 | + | RBCK1 | 20 | - |
| exon-exon | CUX1 | 7 | - | ND1 | MT | + |
| intron-exon | CLSTN2 | 3 | - | CNBP | 3 | - |
| exon-exon | PSAP | 10 | + | PPIAP22 | 21 | + |
| exon-exon | SRP72 | 4 | + | TPD52 | 8 | + |
| exon-exon | TAF1D | 11 | - | TRUB1 | 10 | - |
| exon-intron | EEF1G | 11 | - | CHCHD3 | 7 | + |
| intron-exon | DOCK9 | 13 | + | ATP6 | MT | + |
| exon-exon | ERH | 14 | + | ND2 | MT | + |
| exon-exon | PTGES3 | 12 | + | ND2 | MT | + |
| exon-exon | GRAMD1A | 19 | - | RNA45SN3 | 21 | + |
| exon-exon | ANKRD11 | 16 | - | RPL24 | 3 | - |
| exon-exon | HSPA5 | 9 | - | PPM1G | 2 | - |
| intron-exon | TXNRD1 | 12 | - | LCN2 | 9 | + |
| exon-exon | SFTPA2 | 10 | + | RNA45SN2 | 21 | - |
| exon-exon | EEF2 | 19 | - | EEF2 | 19 | + |
| exon-exon | GTF2H2 | 5 | + | ND2 | MT | + |
| exon-exon | CKAP4 | 12 | + | CKAP4 | 12 | - |
| exon-intron | COX2 | MT | - | B3GNT2 | 2 | + |
| intron-exon | LOC105370384 | 13 | - | CDC16 | 13 | - |
| exon-exon | MGAT5 | 2 | - | KIF1B | 1 | - |
| exon-exon | RPL35P2 | 6 | + | DIAPH1 | 5 | - |
| exon-exon | RPL35 | 9 | + | DIAPH1 | 5 | - |
| exon-exon | TAF15 | 17 | - | LOC440311 | 15 | - |
| exon-intron | NR1D2 | 3 | + | MDC1-AS1 | 6 | + |
| intron-exon | CD3D | 11 | + | KIAA0100 | 17 | + |
| exon-exon | EEF1A1 | 6 | - | SEC14L1 | 17 | - |
| exon-exon | DUSP4 | 8 | - | SRSF5 | 14 | + |
| intron-exon | SLC39A11 | 17 | + | SREBF2 | 22 | + |
| exon-exon | MKI67 | 10 | + | MKI67 | 10 | - |
| exon-exon | MKRN1 | 7 | + | GDA | 9 | - |
| exon-intron | SLC30A9 | 4 | + | HOXC4 | 12 | - |
| exon-exon | ZC3H11A | 1 | - | RNA45SN1 | 21 | + |
| exon-intron | CALM3 | 19 | - | DDX5 | 17 | + |
| exon-exon | AHNAK | 11 | + | BRWD1 | 21 | - |
| exon-exon | SPTLC1 | 9 | + | SPTLC1 | 9 | - |
| exon-exon | HUWE1 | X | - | TMEM229B | 14 | - |
| exon-exon | NCOR2 | 12 | + | OTUD5 | X | + |
| exon-exon | GRK2 | 11 | - | GRK2 | 11 | + |
| exon-exon | PLXNA1 | 3 | + | ATP6 | MT | + |
| exon-exon | MOGS | 2 | + | MALAT1 | 11 | + |
| exon-exon | LAMB2 | 3 | + | LAMB2 | 3 | - |
| exon-intron | ZRANB1 | 10 | + | GLIDR | 9 | - |
| exon-intron | TSPAN3 | 15 | - | CYB5A | 18 | + |
| exon-exon | STT3A | 11 | + | PTPN23 | 3 | + |
| exon-exon | RNA45SN3 | 21 | + | EIF3H | 8 | + |
| exon-exon | MAOA | X | - | ACTB | 7 | - |
| exon-exon | ITGA6-AS1 | 2 | - | RNA45SN3 | 21 | + |
| exon-exon | NCEH1 | 3 | + | NCEH1 | 3 | - |
| exon-exon | RNA45SN2 | 21 | - | PRPF4B | 6 | + |
| exon-intron | FAT1 | 4 | + | BRD4 | 19 | - |
| exon-exon | RNA45SN2 | 21 | - | MARCKSL1 | 1 | - |
| exon-exon | RPS3P3 | 3 | - | RPS3 | 11 | - |
| intron-exon | AIFM3 | 22 | - | AIFM3 | 22 | + |
| intron-exon | ZGPAT | 20 | - | FAM171A1 | 10 | - |
| intron-exon | AMY2B | 1 | - | ND2 | MT | + |
| exon-intron | POLH | 6 | - | XPO5 | 6 | - |
| exon-exon | ARGFXP2 | 17 | - | SNHG1 | 11 | - |
| exon-exon | PTTG1IP | 21 | - | GEMIN2 | 14 | + |
| exon-exon | LAMC1 | 1 | - | GDPD5 | 11 | - |
| exon-exon | ELF3 | 1 | + | ELF3 | 1 | - |
| exon-intron | PAICS | 4 | + | PPHLN1 | 12 | + |
| intron-exon | RNA18SP5 | 21 | - | RPS3 | 11 | + |
| intron-exon | HELLS | 10 | - | HELLS | 10 | + |
| intron-exon | LOC105376247 | 9 | + | MADD | 11 | + |
| exon-exon | EXOC7 | 17 | - | NAP1L1 | 12 | - |
| exon-exon | GTF3C5 | 9 | - | GPRC5A | 12 | + |
| intron-exon | GPR173 | X | - | ND6 | MT | + |
| exon-exon | REPS1 | 6 | - | GTPBP1 | 22 | + |
| exon-exon | PPDPF | 20 | - | HNRNPD | 4 | + |
| intron-exon | LINC01876 | 2 | - | ADGRV1 | 5 | + |
| exon-exon | LOC101929174 | 11 | + | HDLBP | 2 | - |
| intron-exon | TLE3 | 15 | + | PLEKHG2 | 19 | - |
| exon-intron | RAC1 | 7 | + | LOC100133091 | 7 | + |
| exon-exon | MACROH2A2 | 10 | - | ANXA1 | 9 | + |
| exon-exon | CEP250 | 20 | + | POLR2A | 17 | + |
| exon-exon | SPRYD4 | 12 | + | RETREG2 | 2 | + |
| exon-intron | PKM | 15 | + | ATP1A1-AS1 | 1 | - |
| exon-exon | HNRNPA1P48 | 16 | - | KPNA2 | 17 | + |
| intron-exon | EPCAM | 2 | + | GNB1 | 1 | - |
| exon-exon | NCL | 2 | + | DHX9 | 1 | - |
| exon-intron | LOC283335 | 12 | - | EIF4B | 12 | - |
| exon-intron | ND5 | MT | - | DIP2B | 12 | + |
| exon-exon | APEX1 | 14 | + | GBF1 | 10 | + |
| exon-exon | AAGAB | 15 | + | GAPDH | 12 | + |
| exon-exon | RPL3P4 | 14 | - | RPL3P4 | 14 | + |
| exon-exon | RNA45SN3 | 21 | - | RNA45SN1 | 21 | + |
| exon-exon | RPS4X | X | + | LRRFIP1 | 2 | + |
| exon-intron | F11R | 1 | + | LINC00907 | 18 | + |
| exon-exon | HDHD5 | 22 | + | RPL3 | 22 | - |
| exon-exon | RNA45SN2 | 21 | - | UBXN6 | 19 | - |
| intron-exon | METTL3 | 14 | - | TOX4 | 14 | - |
| exon-intron | RPL15 | 3 | - | GLUD1 | 10 | + |
| intron-exon | LRRC8A | 9 | + | PDIA4 | 7 | + |
| exon-intron | LOC343165 | 1 | - | MAP3K13 | 3 | + |
| exon-exon | RPS29 | 14 | + | SLC44A3 | 1 | + |
| exon-exon | ND2 | MT | - | DYNLL2 | 17 | - |
| exon-exon | SART1 | 11 | - | ANXA2 | 15 | - |
| exon-intron | RPL31 | 2 | - | RNA28SP | 21 | + |
| exon-exon | USP54 | 10 | - | ITGA3 | 17 | + |
| exon-intron | CYTB | MT | - | TRPM7 | 15 | - |
| intron-exon | LPP | 3 | + | RBM41 | X | - |
| exon-exon | UPP1 | 7 | - | ESYT1 | 12 | + |
| exon-intron | LGALS3BP | 17 | + | AMBRA1 | 11 | - |
| exon-exon | USH1C | 11 | + | MTCH1 | 6 | + |
| exon-exon | STAT6 | 12 | + | CTTN | 11 | + |
| exon-intron | NUP98 | 11 | - | PPP6R3 | 11 | + |
| intron-exon | FBXO21 | 12 | + | STAMBPL1 | 10 | + |
| exon-exon | ND2 | MT | - | HOOK2 | 19 | - |
| exon-exon | ATP6 | MT | - | SUSD1 | 9 | - |
| exon-intron | RCOR3 | 1 | + | DYRK1A | 21 | - |
| exon-exon | HDGF | 1 | + | FOXRED1 | 11 | + |
| exon-exon | ND2 | MT | - | RPL10 | X | - |
| exon-intron | RN7SL753P | 2 | - | COL11A2 | 6 | + |
| exon-exon | BCLAF1P2 | 16 | - | BCLAF1 | 6 | + |
| exon-intron | DND1P1 | 17 | - | LOC105376839 | 17 | - |
| exon-exon | AREL1 | 14 | - | RPL13A | 19 | + |
| exon-exon | SORT1 | 1 | + | RNA45SN2 | 21 | + |
| intron-exon | HOXB-AS4 | 17 | + | PKM | 15 | + |
| exon-intron | RPS20 | 8 | + | RNA28SP | 21 | + |
| intron-exon | RBCK1 | 20 | + | RPS23 | 5 | + |
| exon-exon | DET1 | 15 | + | API5 | 11 | + |
| exon-exon | TOMM20 | 1 | - | SARNP | 12 | + |
| exon-exon | FOSB | 19 | + | FN1 | 2 | + |
| intron-exon | OTUD7B | 1 | - | TUBA1B | 12 | + |
| exon-intron | TMEM184A | 7 | + | RNA18SP5 | 21 | + |
| intron-exon | NPIPB3 | 16 | - | PDCD11 | 10 | - |
| intron-exon | ACTN1 | 14 | - | KDM6B | 17 | - |
| intron-exon | SLA | 8 | - | ITGAX | 16 | + |
| exon-exon | TNKS1BP1 | 11 | + | MACF1 | 1 | - |
| intron-exon | SH3PXD2A | 10 | - | CASP4 | 11 | + |
| exon-intron | TRIP10 | 19 | - | HAPLN3 | 15 | - |
| exon-exon | AXIN1 | 16 | + | CYBRD1 | 2 | - |
| exon-intron | C9orf72 | 9 | + | GMCL1 | 2 | - |
| exon-exon | TNIP1 | 5 | + | ITCH | 20 | + |
| exon-exon | CHD4 | 12 | - | ZBTB40 | 1 | + |
| exon-intron | MAPK14 | 6 | + | TBC1D14 | 4 | - |
| exon-exon | SCARB2 | 4 | - | NPIPB4 | 16 | - |
| exon-exon | TMEM259 | 19 | - | NMT1 | 17 | + |
| exon-intron | TALAM1 | 11 | - | PCCA | 13 | + |
| exon-intron | UBE2G2 | 21 | - | ATXN7 | 3 | + |
| exon-exon | PPP1CB | 2 | - | PLEKHA3 | 2 | - |
| exon-exon | ND2 | MT | - | ATP6 | MT | - |
| exon-exon | INPP5D | 2 | + | ITGA3 | 17 | + |
| exon-intron | GSTP1 | 11 | - | PPP1R3F | X | + |
| exon-exon | RPS3 | 11 | - | RPS3 | 11 | + |
| exon-exon | CCBE1 | 18 | - | HIVEP3 | 1 | - |
| exon-exon | GCOM1 | 15 | + | CFAP45 | 1 | - |
| exon-exon | MLF2 | 12 | - | DBN1 | 5 | + |
| exon-exon | MRM2 | 7 | - | LOC100128494 | 11 | + |
| intron-exon | LOC107985291 | 19 | - | MFSD13A | 10 | - |
| intron-exon | LOC101927967 | 2 | - | LOC105374817 | 2 | - |
| exon-exon | HSP90AB1 | 6 | - | RNA45SN3 | 21 | + |
| exon-exon | RPL13 | 16 | - | QPCT | 2 | + |
| exon-exon | SPTBN1 | 2 | + | RPS4X | X | - |
| exon-intron | SETD1A | 16 | - | RNR1 | MT | + |
| intron-exon | TEKT4P2 | 21 | - | COX3 | MT | + |
| exon-exon | CSNK1G1 | 15 | - | TRA2B | 3 | + |
| intron-exon | AD000090.1 | 19 | - | CYP2S1 | 19 | + |
| exon-exon | MYH9 | 22 | + | NDUFA12 | 12 | - |
| exon-exon | SPOP | 17 | - | C6orf132 | 6 | + |
| exon-intron | HNRNPU | 1 | - | SLC8A1 | 2 | - |
| exon-exon | B4GALT5 | 20 | - | PTK7 | 6 | + |
| exon-exon | RNA45SN2 | 21 | - | HDLBP | 2 | - |
| intron-exon | WDR4 | 21 | + | TOR1AIP2 | 1 | - |
| exon-intron | SART1 | 11 | - | COPG2 | 7 | - |
| intron-exon | RPS29 | 14 | + | PARM1 | 4 | + |
| exon-intron | RPL3 | 22 | + | FOXP1 | 3 | - |
| exon-exon | RPL13P12 | 17 | + | RPL13 | 16 | + |
| exon-intron | TNRC6A | 16 | + | FMO1 | 1 | + |
| exon-exon | HOXB9 | 17 | + | RPL26 | 17 | - |
| exon-exon | OPTN | 10 | - | HMGN5 | X | - |
| exon-exon | MYO18A | 17 | + | SPTBN1 | 2 | - |
| exon-intron | ZNF346 | 5 | + | DDHD1 | 14 | + |
| exon-exon | RPLP2 | 11 | - | RPLP2 | 11 | + |
| exon-exon | ERGIC1 | 5 | + | EIF3B | 7 | - |
| exon-exon | TMEM214 | 2 | - | DRG1 | 22 | + |
| exon-exon | RPL27A | 11 | + | PARGP1-AGAP4 | 10 | - |
| intron-exon | ATG10 | 5 | + | UBE2Z | 17 | + |
| intron-exon | GTPBP4 | 10 | - | RPS17 | 15 | - |
| exon-intron | RPL31 | 2 | - | RNA28SP | 21 | + |
| intron-exon | TTF1 | 9 | - | TOM1L2 | 17 | - |
| exon-exon | RPL29 | 3 | + | MRPS18B | 6 | + |
| exon-exon | RNA45SN2 | 21 | - | COG4 | 16 | - |
| exon-exon | FABP5 | 8 | - | RNA45SN3 | 21 | + |
| exon-intron | STRBP | 9 | + | SLC35A5 | 3 | - |
| intron-exon | ARID1B | 6 | - | IDH3B | 20 | - |
| exon-exon | TAB2 | 6 | - | SLC9B2 | 4 | + |
| exon-exon | NUP210 | 3 | - | RPS4X | X | - |
| exon-exon | CNDP2 | 18 | - | RPL9 | 4 | - |
| intron-exon | MOB1B | 4 | - | DDX10 | 11 | + |
| exon-intron | PHLPP2 | 16 | - | ITGA2 | 5 | + |
| exon-exon | ZDHHC9 | X | + | ZDHHC9 | X | - |
| exon-exon | ZFC3H1 | 12 | - | DDX46 | 5 | + |
| exon-exon | TCF7L2 | 10 | - | ATP5MC3 | 2 | - |
| exon-exon | RNA45SN1 | 21 | + | C11orf24 | 11 | - |
| exon-intron | GARS1-DT | 7 | + | IQGAP3 | 1 | + |
| exon-exon | CD63 | 12 | + | PUM1 | 1 | - |
| exon-exon | HCFC1 | X | - | ARHGAP35 | 19 | + |
| exon-intron | FLNB | 3 | - | ZNF195 | 11 | + |
| exon-exon | BRD2 | 6 | - | BRD2 | 6 | + |
| exon-exon | RPS12 | 6 | - | PABPC4 | 1 | - |
| exon-exon | SYNE2 | 14 | - | SYNE2 | 14 | + |
| exon-intron | CHMP2A | 19 | + | SH3PXD2A | 10 | - |
| exon-exon | TALAM1 | 11 | - | GAPDH | 12 | + |
| exon-intron | XIST | X | - | ZNF852 | 3 | - |
| intron-exon | CNOT10 | 3 | - | TRIM44 | 11 | + |
| exon-exon | PMS2P1 | 7 | - | DMTF1 | 7 | - |
| intron-exon | TTL | 2 | - | EIF6 | 20 | - |
| exon-intron | ALG5 | 13 | - | PRKCA | 17 | - |
| exon-exon | DHX32 | 10 | - | SEPTIN2 | 2 | - |
| intron-exon | CLPB | 11 | + | HECA | 6 | + |
| exon-exon | YBX1 | 1 | - | PTMA | 2 | + |
| intron-exon | ENO4 | 10 | + | SHTN1 | 10 | - |
| exon-exon | NEDD4 | 15 | + | NEDD4 | 15 | - |
| exon-exon | SEC24C | 10 | - | SEC24C | 10 | + |
| exon-exon | MYH9 | 22 | + | CFDP1 | 16 | + |
| intron-exon | ZDHHC9 | X | + | KRT15 | 17 | - |
| exon-intron | LASP1 | 17 | + | BCL2L2-PABPN1 | 14 | + |
| exon-intron | TUBA1B | 12 | + | AFG3L1P | 16 | - |
| exon-intron | NCL | 2 | + | SAMD5 | 6 | + |
| exon-exon | POTEI | 2 | - | ZNF131 | 5 | + |
| exon-exon | MALAT1 | 11 | - | RPS6 | 9 | - |
| exon-exon | RPL14 | 3 | + | KBTBD7 | 13 | - |
| intron-exon | GLB1 | 3 | + | CEP126 | 11 | + |
| intron-exon | CLK2 | 1 | + | LOC100505549 | 18 | - |
| intron-exon | MICA | 6 | - | ASXL2 | 2 | - |
| intron-exon | RNR2 | MT | - | UTRN | 6 | + |
| exon-exon | RABL6 | 9 | + | EVPL | 17 | - |
| intron-exon | PROM1 | 4 | + | CLIC1 | 6 | - |
| exon-exon | GAPDH | 12 | - | MRPS17 | 7 | + |
| intron-exon | HERC4 | 10 | + | RACK1 | 5 | - |
| exon-exon | ECHDC2 | 1 | + | ECHDC2 | 1 | - |
| exon-exon | LTBP3 | 11 | + | DDIT4 | 10 | + |
| intron-exon | TEKT4P2 | 21 | - | TUBB | 6 | - |
| intron-exon | NAALADL2 | 3 | + | CORO1C | 12 | - |
| exon-exon | NCL | 2 | + | IGF2BP1 | 17 | + |
| exon-intron | TGOLN2 | 2 | - | FBXW8 | 12 | + |
| intron-exon | ZHX3 | 20 | - | PHB | 17 | - |
| exon-exon | P4HB | 17 | + | RNA45SN2 | 21 | + |
| exon-exon | RNA45SN3 | 21 | - | MALAT1 | 11 | + |
| intron-exon | WNK2 | 9 | - | TGS1 | 8 | + |
| exon-intron | PA2G4 | 12 | - | BICRA | 19 | - |
| intron-exon | PPP6R3 | 11 | + | ND2 | MT | + |
| intron-exon | TNS3 | 7 | - | CCNG1 | 5 | - |
| intron-exon | EIF4B | 12 | + | ZNF138 | 7 | + |
| exon-intron | HMGB1P6 | 15 | - | RNR2 | MT | + |
| exon-exon | PPP1R13B | 14 | + | LINC02595 | X | + |
| exon-exon | TNK2 | 3 | - | CELF1 | 11 | + |
| intron-exon | EPB41L1 | 20 | + | ND5 | MT | - |
| exon-intron | ARHGAP26 | 5 | - | USP34 | 2 | - |
| intron-exon | RB1CC1 | 8 | - | SMARCC2 | 12 | - |
| exon-intron | NCL | 2 | - | CENPC | 4 | + |
| exon-exon | EZR | 6 | - | ANP32B | 9 | + |
| intron-exon | RTN3 | 11 | + | NSA2 | 5 | + |
| exon-exon | CPSF1 | 8 | + | CPSF1 | 8 | - |
| exon-intron | ZNF106 | 15 | + | TMEM131 | 2 | - |
| intron-exon | CDC42 | 1 | - | GXYLT1 | 12 | - |
| exon-intron | RNA45SN1 | 21 | - | SLC25A25 | 9 | + |
| exon-exon | RPL3P2 | 6 | - | CCT7 | 2 | + |
| intron-exon | RP9P | 7 | - | CAST | 5 | - |
| intron-exon | UQCC1 | 20 | + | CUL4A | 13 | - |
| exon-exon | RPL13AP5 | 10 | - | RPL13A | 19 | + |
| intron-exon | CELSR3 | 3 | - | SEPTIN9 | 17 | - |
| exon-exon | RIPOR1 | 16 | - | TANGO2 | 22 | + |
| exon-exon | CCDC47 | 17 | + | NCL | 2 | - |
| exon-exon | FTL | 19 | - | SNHG29 | 17 | + |
| exon-exon | RNA45SN3 | 21 | - | ANXA11 | 10 | + |
| exon-exon | SERINC1 | 6 | - | UGT8 | 4 | - |
| exon-intron | LOC105369957 | 12 | - | WASH8P | 12 | - |
| exon-intron | FKBP5 | 6 | - | LOC101929309 | 6 | + |
| exon-exon | NCL | 2 | - | NAP1L1 | 12 | - |
| intron-exon | SYNE3 | 14 | + | CANX | 5 | - |
| exon-exon | KIAA1614 | 1 | - | TMEM176B | 7 | + |
| exon-exon | CCNK | 14 | + | HLA-C | 6 | - |
| intron-exon | ANKMY1 | 2 | - | LLGL2 | 17 | - |
| intron-exon | SLC12A7 | 5 | + | CYBA | 16 | - |
| exon-intron | RNA45SN2 | 21 | - | BUD23 | 7 | + |
| exon-exon | LNX1 | 4 | + | FAM204A | 10 | - |
| exon-exon | GSTP1 | 11 | - | XRCC5 | 2 | + |
| exon-exon | CDH1 | 16 | - | EFNB2 | 13 | - |
| exon-exon | SLC25A3 | 12 | - | PLEKHA6 | 1 | - |
| exon-exon | ATP5F1B | 12 | - | CLU | 8 | + |
| exon-exon | JAK2 | 9 | + | B2M | 15 | + |
| exon-exon | BSG | 19 | - | ZKSCAN1 | 7 | + |
| exon-exon | FLNA | X | + | MGLL | 3 | - |
| exon-exon | SF3B3 | 16 | - | SPDYE5 | 7 | - |
| exon-intron | HCG25 | 6 | + | ZBTB7C | 18 | + |
| exon-exon | CTNNBIP1 | 1 | - | ZNF621 | 3 | - |
| exon-exon | S100A6 | 1 | + | COX3 | MT | + |
| exon-exon | SF3B2 | 11 | - | SF3B2 | 11 | + |
| intron-exon | FGF13 | X | + | SS18 | 18 | + |
| intron-exon | EFCAB13 | 17 | - | SMIM10L2A | X | - |
| exon-intron | GAPDH | 12 | + | WWOX | 16 | + |
| intron-exon | PRKCA | 17 | + | PNMA2 | 8 | - |
| exon-exon | SF3B2 | 11 | + | SCAF4 | 21 | - |
| exon-exon | DCK | 4 | - | PRPF8 | 17 | + |
| exon-intron | DDX11 | 12 | - | ARRB1 | 11 | - |
| exon-exon | EBF1 | 5 | - | SCAF1 | 19 | - |
| exon-exon | DNASE1 | 16 | + | PODXL | 7 | + |
| intron-exon | QRICH1 | 3 | + | PRKAR2A | 3 | - |
| exon-exon | SIAH1 | 16 | + | RPS16 | 19 | - |
| exon-intron | PRRC2B | 9 | + | CREB3L1 | 11 | + |
| intron-exon | JARID2 | 6 | - | CCL22 | 16 | - |
| exon-exon | TNS2 | 12 | - | MMP12 | 11 | - |
| intron-exon | VAV2 | 9 | + | EFNB1 | X | - |
| exon-intron | LOC112268284 | 21 | - | STAG3L5P-PVRIG2P-PILRB | 7 | + |
| exon-intron | SMARCC2 | 12 | + | LINC00598 | 13 | - |
| exon-intron | POM121B | 7 | - | CCDC32 | 15 | + |
| exon-intron | VPS41 | 7 | - | KLF12 | 13 | - |
| intron-exon | UBE2D2 | 5 | - | TALAM1 | 11 | - |
| intron-exon | PRMT7 | 16 | - | QKI | 6 | - |
| exon-exon | KCNK3 | 2 | + | KCNK3 | 2 | - |
| intron-exon | PRKDC | 8 | + | SVIL | 10 | - |
| exon-exon | TPT1 | 13 | - | UBA52 | 19 | - |
| intron-exon | TMTC2 | 12 | - | ATP6V0A1 | 17 | + |
| intron-exon | ESRRG | 1 | - | UBE2N | 12 | + |
| exon-exon | PKD1P5-LOC105376752 | 16 | + | PKD1P4-NPIPA8 | 16 | - |
| exon-exon | FBXO44 | 1 | + | MTSS2 | 16 | - |
| exon-exon | PLAC4 | 21 | - | LASP1 | 17 | + |
| exon-exon | PPP1R12B | 1 | - | PPP1R12B | 1 | + |
| exon-exon | KPNB1 | 17 | - | PRPF8 | 17 | + |
| exon-exon | CLCNKB | 1 | - | LOC112268155 | 15 | - |
| exon-exon | HIGD1A | 3 | + | HIGD1AP12 | 1 | + |
| intron-exon | ETV6 | 12 | - | SHFL | 19 | - |
| exon-intron | ND2 | MT | - | PLCG2 | 16 | + |
| exon-intron | PKM | 15 | + | GSE1 | 16 | - |
| exon-exon | YBX3 | 12 | + | NFAT5 | 16 | + |
| exon-exon | ANKRD11 | 16 | - | GOLGB1 | 3 | - |
| exon-intron | LOC101928152 | 2 | - | SMIM4 | 3 | - |
| intron-exon | UBE2D2 | 5 | - | ZNF318 | 6 | + |
| exon-intron | CTTNBP2NL | 1 | + | BCL9L | 11 | + |
| exon-exon | PHF12 | 17 | + | PHF12 | 17 | - |
| exon-exon | NUMA1 | 11 | + | NUMA1 | 11 | - |
| exon-exon | TMEM127 | 2 | - | HSPG2 | 1 | - |
| exon-exon | ACTG1 | 17 | + | EIF3C | 16 | + |
| exon-exon | CTSA | 20 | - | ATP6V0A4 | 7 | + |
| intron-exon | ZNF718 | 4 | + | EIF2B2 | 14 | - |
| exon-exon | FURIN | 15 | + | ANKRD11 | 16 | - |
| exon-exon | ND4 | MT | - | TMEM87A | 15 | - |
| intron-exon | LOC101927400 | 2 | + | MGP | 12 | - |
| exon-intron | TIMP1 | X | + | PDGFRB | 5 | - |
| exon-intron | CCL19 | 9 | + | FAM171A1 | 10 | - |
| exon-exon | TTN | 2 | - | TTN | 2 | + |
| exon-exon | IL32 | 16 | + | MRPS10 | 6 | - |
| intron-exon | LOC101929099 | 1 | - | SEC31A | 4 | + |
| exon-exon | PER2 | 2 | - | PER2 | 2 | + |
| exon-intron | PROM1 | 4 | - | HSD17B11 | 4 | - |
| intron-exon | ANKS1B | 12 | - | PCMTD1 | 8 | - |
| exon-exon | BMPR1A | 10 | - | CBWD2 | 2 | - |
| exon-exon | MYOZ2 | 4 | + | MYOZ2 | 4 | - |
| exon-exon | SYNM | 15 | + | KIF5B | 10 | - |
| exon-exon | NOL9 | 1 | + | SUPT5H | 19 | + |
| exon-exon | MYL12A | 18 | - | TCN1 | 11 | - |
| exon-exon | FHL1 | X | - | COX6C | 8 | - |
| exon-exon | S100A11 | 1 | + | MYL12A | 18 | + |
| intron-exon | KIAA1549L | 11 | - | MALAT1 | 11 | + |
| intron-exon | LOC101928451 | 7 | + | MAPRE2 | 18 | - |
| exon-intron | KRT16 | 17 | - | GPRC5D-AS1 | 12 | + |
| exon-exon | MYH7 | 14 | - | MYH2 | 17 | - |
| exon-exon | GNL3 | 3 | - | GNL3 | 3 | + |
| exon-intron | NEAT1 | 11 | + | RNR2 | MT | - |
| exon-intron | MYH7 | 14 | + | LOC105372956 | 1 | - |
| intron-exon | ITPR3 | 6 | + | ILKAP | 2 | + |
| intron-exon | ROBO1 | 3 | + | ND4 | MT | - |
| exon-exon | PFKFB3 | 10 | + | ECM1 | 1 | + |
| exon-intron | EPCAM | 2 | + | ADAM9 | 8 | + |
| exon-exon | CD99L2 | X | + | MYH7 | 14 | - |
| intron-exon | C1QTNF3 | 5 | - | MYH1 | 17 | - |
| intron-exon | FOXJ3 | 1 | + | NECAP1 | 12 | - |
| intron-exon | MYHAS | 17 | + | MYH2 | 17 | - |
| exon-exon | CD59 | 11 | - | UACA | 15 | + |
| intron-exon | LOC101927741 | 2 | - | LUC7L | 16 | - |
| exon-exon | SERPINA3 | 14 | + | CD59 | 11 | - |
| exon-exon | C6orf58 | 6 | - | CYTB | MT | + |
| exon-exon | UACA | 15 | - | ND4 | MT | - |
| intron-exon | NOTCH2NLA | 1 | + | CTPS2 | X | + |
| exon-intron | EIF1 | 17 | - | NRG3 | 10 | + |
| intron-exon | NADSYN1 | 11 | - | ZNF316 | 7 | - |
| intron-exon | S100A11 | 1 | + | CFL2 | 14 | - |
| exon-exon | MIR4697HG | 11 | + | SCOCP1 | 14 | + |
| exon-exon | GABRE | X | - | SYNPO2 | 4 | + |
| exon-intron | ARL6IP5 | 3 | + | EBF3 | 10 | - |
| exon-exon | ND5 | MT | + | ND6 | MT | + |
| exon-exon | TRDMT1 | 10 | - | PANK1 | 10 | + |
| exon-intron | TPT1 | 13 | + | LOC105369823 | 12 | + |
| exon-exon | FHL1 | X | - | COX6C | 8 | - |
| intron-exon | LOC101928174 | 15 | + | FNBP1 | 9 | - |
| intron-exon | TSPAN9 | 12 | - | ATP6 | MT | + |
| intron-exon | OBSCN | 1 | - | BRD2 | 6 | + |
| exon-exon | MYO18A | 17 | - | ABCC1 | 16 | - |
| exon-exon | CNKSR3 | 6 | + | SBSN | 19 | + |
| exon-exon | SBF1 | 22 | + | MYLPF | 16 | + |
| exon-exon | RPL15P3 | 6 | - | COX1 | MT | + |
| exon-exon | RTL6 | 22 | + | XPC | 3 | - |
| intron-exon | CARNS1 | 11 | + | ND4 | MT | + |
| exon-intron | TFDP1 | 13 | + | TBL1X | X | - |
| intron-exon | SLK | 10 | - | WASF3 | 13 | + |
| exon-intron | ND4 | MT | - | PAX8-AS1 | 2 | + |
| intron-exon | WWP2 | 16 | + | DDHD1 | 14 | - |
| exon-exon | ATP2B4 | 1 | + | HSPA1B | 6 | + |
| exon-exon | FAM149B1 | 10 | + | RNA45SN3 | 21 | + |
| exon-intron | FBXO32 | 8 | - | MYEOV | 11 | + |
| exon-exon | IL27RA | 19 | - | TTN | 2 | - |
| exon-intron | RCN1P2 | 13 | - | PDE3A | 12 | + |
| exon-intron | IGKV1-33 | 2 | - | IGK | 2 | - |
| exon-exon | USP46 | 4 | - | CCNI | 4 | + |
| exon-exon | KRT14 | 17 | - | PPP2R1A | 19 | - |
| exon-exon | PKM | 15 | - | EPN2 | 17 | - |
| exon-exon | THBD | 20 | + | KLHL36 | 16 | + |
| exon-intron | CRTAP | 3 | - | FAM81A | 15 | - |
| exon-exon | SLC43A3 | 11 | - | RTL8C | X | + |
| exon-exon | EGR1 | 5 | - | EGR1 | 5 | + |
| intron-exon | AC013463.2 | 2 | - | TG | 8 | - |
| exon-exon | EIF4B | 12 | + | KMT2D | 12 | - |
| exon-exon | MBD6 | 12 | + | SCARA3 | 8 | + |
| exon-intron | KIF3B | 20 | - | AC087564.1 | 16 | + |
| exon-intron | CRYAB | 11 | + | GRK5 | 10 | - |
| exon-exon | CD74 | 5 | - | PUM2 | 2 | - |
| exon-intron | TRAPPC1 | 17 | + | CRMP1 | 4 | - |
| exon-exon | MT1M | 16 | + | MT1X | 16 | + |
| exon-exon | IGHG1 | 14 | + | IGHJ6 | 14 | + |
| exon-exon | LAMA3 | 18 | - | PKP1 | 1 | + |
| exon-exon | CBFB | 16 | - | HNRNPA2B1 | 7 | + |
| intron-exon | TTLL11 | 9 | + | ZNF283 | 19 | - |
| exon-exon | SERINC1 | 6 | - | CAB39 | 2 | + |
| intron-exon | SCRIB | 8 | - | PMS2P3 | 7 | - |
| exon-intron | TTLL3 | 3 | - | TTLL3 | 3 | + |
| exon-exon | GBF1 | 10 | - | GBF1 | 10 | + |
| exon-exon | CYTB | MT | - | DSP | 6 | - |
| exon-exon | M6PR | 12 | - | RPS27L | 15 | + |
| exon-exon | COX3 | MT | - | BZW2 | 7 | + |
| exon-intron | SECISBP2 | 9 | - | KIAA0586 | 14 | + |
| intron-exon | DCTN4 | 5 | - | LOC100129034 | 9 | + |
| exon-exon | CTSB | 8 | - | CTSB | 8 | + |
| exon-exon | PPIG | 2 | + | PPIG | 2 | - |
| exon-exon | KIF3A | 5 | + | KIF3A | 5 | - |
| exon-intron | TRAM2 | 6 | + | NAALADL2 | 3 | + |
| exon-intron | PDIA4 | 7 | - | FRG1CP | 20 | - |
| exon-intron | A2ML1 | 12 | + | SNX29 | 16 | + |
| exon-intron | SPOCK1 | 5 | + | LOC107985219 | 1 | + |
| exon-intron | TRAM2 | 6 | + | NAALADL2 | 3 | + |
| exon-intron | CRTC3-AS1 | 15 | + | CRTC3-AS1 | 15 | - |
| intron-exon | LINC00937 | 12 | + | ANKMY1 | 2 | + |
| exon-exon | UTP3 | 4 | - | UTP3 | 4 | + |
| exon-exon | SPIRE1 | 18 | + | CYP27C1 | 2 | + |
| exon-exon | TRAPPC12 | 2 | + | ABL2 | 1 | - |
| intron-exon | FRMD5 | 15 | + | RNA45SN1 | 21 | + |
| exon-intron | PYCARD | 16 | + | PYCARD | 16 | - |
| exon-intron | KRT16P3 | 17 | - | HBA-LCR | 16 | + |
| exon-exon | ATP6 | MT | - | KDM1A | 1 | + |
| intron-exon | PXN-AS1 | 12 | + | PXN | 12 | - |
| exon-exon | LMO4 | 1 | - | LMO4 | 1 | + |
| exon-exon | CDC42BPB | 14 | + | NEDD4L | 18 | + |
| exon-exon | MAP7 | 6 | + | GATAD2B | 1 | + |
| intron-exon | HIPK2 | 7 | + | FAM83A | 8 | - |
| exon-exon | MFN2 | 1 | - | MFN2 | 1 | + |
| exon-exon | IFITM3 | 11 | + | IFITM3 | 11 | - |
| exon-exon | BCAM | 19 | - | PES1 | 22 | - |
| intron-exon | PRKCZ | 1 | - | IFITM2 | 11 | + |
| intron-exon | ZEB1 | 10 | - | ZNF292 | 6 | + |
| exon-exon | CD164 | 6 | - | NEAT1 | 11 | - |
| exon-intron | MYO1E | 15 | + | HCFC1 | X | + |
| intron-exon | RNA28SP | 21 | + | RNA45SN1 | 21 | + |
| exon-intron | TCIRG1 | 11 | + | SQOR | 15 | + |
| intron-exon | KRT16 | 17 | + | SNAPC1 | 14 | + |
| exon-exon | SLC35A5 | 3 | + | SNRPEP4 | 19 | + |
| intron-exon | LOC107984461 | 12 | - | PPFIBP1 | 12 | - |
| exon-exon | MLLT10 | 10 | - | ITM2B | 13 | + |
| exon-exon | CRTC2 | 1 | - | CRTC2 | 1 | + |
| intron-exon | IGFBP4 | 17 | - | RPLP1 | 15 | - |
| intron-exon | ANO1 | 11 | + | NDRG1 | 8 | + |
| exon-intron | CHORDC1 | 11 | + | RERE | 1 | - |
| exon-intron | MSN | X | - | NAA38 | 17 | - |
| exon-exon | COL1A2 | 7 | + | GGT7 | 20 | + |
| exon-intron | YWHAB | 20 | + | OSBPL5 | 11 | - |
| intron-exon | DHODH | 16 | + | PKN1 | 19 | - |
| exon-intron | SLC43A3 | 11 | + | NTPCR | 1 | - |
| exon-exon | SDC1 | 2 | - | RNA45SN3 | 21 | + |
| exon-exon | IFITM3 | 11 | + | IFITM3 | 11 | - |
| exon-exon | PPFIA3 | 19 | - | ERBB2 | 17 | - |
| intron-exon | ANKDD1A | 15 | - | TNKS1BP1 | 11 | - |
| exon-intron | TMEM87A | 15 | - | DDX47 | 12 | + |
| exon-exon | SEC63 | 6 | + | SARAF | 8 | - |
| exon-intron | SNX12 | X | + | BICD1 | 12 | - |
| exon-exon | R3HDM1 | 2 | - | R3HDM1 | 2 | + |
| intron-exon | NAV2 | 11 | + | HNRNPH1 | 5 | - |
| intron-exon | CAPZA1 | 1 | + | VPS52 | 6 | - |
| intron-exon | HERC6 | 4 | - | LAMB2 | 3 | - |
| exon-exon | UBE2H | 7 | + | UBE2H | 7 | - |
| exon-intron | EARS2 | 16 | - | PAX8 | 2 | - |
| intron-exon | STAG3L5P-PVRIG2P-PILRB | 7 | - | LOC283335 | 12 | - |
| exon-intron | ANTXR1 | 2 | + | NCOA3 | 20 | + |
| exon-exon | TUBB | 6 | + | TNRC6A | 16 | + |
| exon-exon | MCFD2 | 2 | + | MMS19 | 10 | - |
| exon-intron | COX1 | MT | - | AGO2 | 8 | + |
| exon-exon | MUC16 | 19 | - | ERO1A | 14 | - |
| exon-exon | USP22 | 17 | + | HLA-DRA | 6 | + |
| exon-exon | ND6 | MT | - | THOC2 | X | - |
| intron-exon | RP11-449J1.1 | 1 | - | CNIH3 | 1 | - |
| exon-exon | PSEN1 | 14 | - | TOPORS | 9 | + |
| intron-exon | ZNF826P | 19 | - | ZNF682 | 19 | - |
| exon-exon | STAT3 | 17 | + | STAT3 | 17 | - |
| exon-intron | ACTR2 | 2 | - | EIF4A2 | 3 | + |
| exon-exon | HSPB8 | 12 | + | KDM5B | 1 | + |
| exon-exon | TPM2 | 9 | - | MYH9 | 22 | - |
| exon-exon | LLGL1 | 17 | + | RNA45SN1 | 21 | - |
| exon-intron | MIF-AS1 | 22 | - | AP000350.4 | 22 | - |
| intron-exon | VOPP1 | 7 | - | ZNF24 | 18 | - |
| exon-exon | CBLB | 3 | + | CBLB | 3 | - |
| intron-exon | FYN | 6 | + | EEF1A1P5 | 9 | - |
| exon-exon | PLVAP | 19 | + | SRGAP1 | 12 | + |
| exon-exon | PLEC | 8 | + | LIMD1 | 3 | + |
| exon-exon | AVIL | 12 | - | ZNF587B | 19 | + |
| exon-exon | ZNF436 | 1 | - | RAPGEF3 | 12 | - |
| intron-exon | CCSER2 | 10 | - | RNA45SN2 | 21 | + |
| intron-exon | ATF7IP | 12 | + | LDHA | 11 | + |
| exon-exon | SMG5 | 1 | + | SMG5 | 1 | - |
| exon-exon | HSP90AA1 | 14 | + | SEC31A | 4 | + |
| exon-exon | GABBR1 | 6 | + | UCP2 | 11 | + |
| intron-exon | TMEM189-UBE2V1 | 20 | + | ARFGEF1 | 8 | + |
| intron-exon | CSF2RA | Y | + | TMEM214 | 2 | + |
| exon-intron | LARP1 | 5 | + | HIRA | 22 | - |
| exon-exon | CELSR1 | 22 | - | MOB3A | 19 | - |
| exon-intron | PLA2G6 | 22 | + | ACSBG1 | 15 | + |
| exon-intron | IGHG1 | 14 | - | IGHGP | 14 | - |
| exon-intron | SPG11 | 15 | - | ITGA9 | 3 | - |
| exon-intron | ZNF160 | 19 | - | LOC101927151 | 19 | + |
| exon-exon | TRIM29 | 11 | - | TRIM29 | 11 | + |
| intron-exon | MYBPHL | 1 | + | CEP170B | 14 | - |
| exon-intron | ACTB | 7 | - | LOC642846 | 12 | + |
| exon-exon | BBS10 | 12 | + | FGFR3 | 4 | + |
| exon-intron | NBPF8 | 1 | - | ADGRF5 | 6 | - |
| exon-exon | BAP1 | 3 | - | BAP1 | 3 | + |
| intron-exon | BOC | 3 | - | IGHG1 | 14 | - |
| exon-exon | RPS6 | 9 | + | IVL | 1 | + |
| exon-intron | EEF1A1 | 6 | + | PECR | 2 | + |
| intron-exon | CHID1 | 11 | + | CLU | 8 | - |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN1 | 21 | + |
| exon-exon | WDR41 | 5 | - | SPRED1 | 15 | - |
| exon-exon | SRRT | 7 | - | SRRT | 7 | + |
| intron-exon | MALL | 2 | + | ND6 | MT | + |
| intron-exon | SF3B3 | 16 | + | NEDD9 | 6 | + |
| intron-exon | PDGFC | 4 | - | MALAT1 | 11 | + |
| exon-intron | PPP1R10 | 6 | - | VCL | 10 | + |
| exon-intron | PRSS44P | 3 | - | PRSS50 | 3 | - |
| exon-exon | KLC1 | 14 | + | NECTIN1 | 11 | + |
| exon-exon | NOLC1 | 10 | - | NOP9 | 14 | + |
| exon-exon | PRDM10 | 11 | + | COL12A1 | 6 | - |
| exon-exon | TELO2 | 16 | + | TELO2 | 16 | - |
| intron-exon | VTI1A | 10 | + | HARS1 | 5 | + |
| exon-exon | KRT6C | 12 | - | KRT6B | 12 | - |
| exon-exon | PROS1 | 3 | - | DUSP10 | 1 | + |
| intron-exon | ZDHHC3 | 3 | + | LYRM9 | 17 | - |
| exon-exon | MYH1 | 17 | - | NME2P1 | 12 | + |
| exon-exon | BCL2L2-PABPN1 | 14 | - | WDR47 | 1 | - |
| exon-exon | FLNA | X | + | FLNA | X | - |
| intron-exon | ARID4B | 1 | + | SLC4A7 | 3 | - |
| exon-exon | HSP90AA1 | 14 | + | NBPF10 | 1 | + |
| exon-intron | ZNF133 | 20 | - | ITSN2 | 2 | - |
| intron-exon | ABCC3 | 17 | - | PCYT2 | 17 | + |
| intron-exon | DTX2P1-UPK3BP1-PMS2P11 | 7 | - | CCDC18-AS1 | 1 | - |
| intron-exon | MAGI1 | 3 | - | CDK5RAP3 | 17 | - |
| intron-exon | ALDH3A2 | 17 | + | SMC1A | X | + |
| intron-exon | LOC107984214 | 10 | - | SGMS1 | 10 | + |
| exon-intron | TG | 8 | + | KIF3B | 20 | + |
| exon-exon | TSHR | 14 | + | GTPBP4 | 10 | - |
| exon-exon | ATP13A4 | 3 | - | ATP13A4 | 3 | + |
| exon-intron | SFTPC | 8 | - | CGN | 1 | + |
| intron-exon | LOC284454 | 19 | + | CAV1 | 7 | + |
| intron-exon | SEPTIN9 | 17 | - | SEPTIN9 | 17 | + |
| intron-exon | ACOXL | 2 | - | KDM6B | 17 | + |
| exon-intron | RNA45SN1 | 21 | + | CXCL17 | 19 | - |
| exon-intron | FLNA | X | + | RHOU | 1 | - |
| exon-intron | COX1 | MT | + | GJC2 | 1 | + |
| intron-exon | KCNQ3 | 8 | + | SLC35A4 | 5 | + |
| exon-intron | FOXM1 | 12 | - | ITFG2 | 12 | - |
| intron-exon | P3H2 | 3 | + | SLC2A3 | 12 | + |
| intron-exon | TRHDE | 12 | + | FAM168A | 11 | - |
| exon-intron | IGF1R | 15 | - | ASMTL | Y | - |
| intron-exon | MYH10 | 17 | + | PARVA | 11 | + |
| exon-exon | RNA45SN2 | 21 | - | SUZ12P1 | 17 | + |
| exon-intron | RPL22 | 1 | + | PCSK6 | 15 | - |
| exon-intron | IL3RA | Y | + | GNA12 | 7 | - |
| exon-exon | BNC2 | 9 | + | ARHGAP44 | 17 | + |
| exon-exon | INF2 | 14 | - | RAB5IF | 20 | + |
| exon-exon | HERC2P2 | 15 | - | RNA45SN1 | 21 | + |
| intron-exon | LOC106627982 | 1 | + | POM121 | 7 | + |
| exon-exon | DCHS1 | 11 | - | DCHS1 | 11 | + |
| intron-exon | DCTN4 | 5 | - | DCTN4 | 5 | + |
| intron-exon | PKD1P4-NPIPA8 | 16 | - | PKD1P4-NPIPA8 | 16 | + |
| exon-intron | TJP1 | 15 | + | LOC105370397 | 14 | + |
| exon-intron | NCOR2 | 12 | + | LOC112268284 | 21 | - |
| exon-exon | TXNIP | 1 | - | TXNIP | 1 | + |
| exon-exon | TRAF3IP3 | 1 | + | MICOS13 | 19 | + |
| exon-exon | CASZ1 | 1 | + | MAPKAPK2 | 1 | + |
| intron-exon | LOC105372273 | 19 | + | DOCK6 | 19 | + |
| exon-intron | SMAD3 | 15 | - | TRPM4 | 19 | + |
| exon-intron | U2AF1L4 | 19 | + | CABLES1 | 18 | - |
| exon-exon | PXN | 12 | + | SFTPA2 | 10 | - |
| exon-intron | DOT1L | 19 | - | COL6A1 | 21 | - |
| exon-exon | TPSB2 | 16 | + | MYADM | 19 | - |
| intron-exon | CTTN | 11 | + | CSF2RB | 22 | - |
| exon-intron | DNAAF1 | 16 | + | STK10 | 5 | - |
| intron-exon | SLC13A4 | 7 | - | WDR46 | 6 | + |
| exon-exon | FSTL3 | 19 | + | FSTL3 | 19 | - |
| exon-exon | TALAM1 | 11 | - | MALAT1 | 11 | + |
| exon-intron | RTL6 | 22 | - | PTPRM | 18 | - |
| exon-intron | F11R | 1 | - | DDIT3 | 12 | + |
| exon-intron | ZNF45 | 19 | - | NPIPB13 | 16 | - |
| exon-exon | STAT6 | 12 | - | IFITM2 | 11 | - |
| exon-exon | RRBP1 | 20 | + | BCL6 | 3 | - |
| exon-exon | FKTN | 9 | - | RPL39 | X | - |
| exon-exon | ND1 | MT | - | NEAT1 | 11 | + |
| exon-intron | GPD1L | 3 | - | UBE2G1 | 17 | - |
| exon-intron | GPD1L | 3 | - | UBE2G1 | 17 | - |
| exon-intron | GIMAP4 | 7 | + | ANO10 | 3 | + |
| intron-exon | KRT87P | 12 | - | ITGA6 | 2 | + |
| exon-exon | INPP1 | 2 | + | SFTPC | 8 | + |
| intron-exon | LRCH1 | 13 | + | PIK3R1 | 5 | + |
| intron-exon | TM9SF2 | 13 | - | SPIDR | 8 | - |
| intron-exon | GRK5 | 10 | - | ANKRD26 | 10 | - |
| intron-exon | LOC107986198 | 4 | - | GTF3C1 | 16 | - |
| exon-intron | ELF4 | X | - | CREB5 | 7 | - |
| exon-exon | CD55 | 1 | + | CD34 | 1 | - |
| exon-exon | PPRC1 | 10 | - | PPRC1 | 10 | + |
| exon-intron | DNMBP | 10 | + | PER1 | 17 | + |
| intron-exon | GCN1 | 12 | - | HIPK2 | 7 | + |
| exon-intron | TRAK2 | 2 | + | GHRLOS | 3 | + |
| intron-exon | AC016590.1 | 19 | - | YBX3 | 12 | + |
| exon-exon | LRP1 | 12 | - | LRP1 | 12 | + |
| intron-exon | HFM1 | 1 | - | PTPRS | 19 | + |
| exon-intron | RNA45SN2 | 21 | + | ABR | 17 | - |
| exon-intron | RNA45SN3 | 21 | + | ABR | 17 | - |
| exon-intron | A2M | 12 | - | EPN2 | 17 | + |
| exon-exon | SPTBN1 | 2 | - | GPATCH1 | 19 | + |
| exon-intron | FLT4 | 5 | + | LOC112268076 | 11 | - |
| exon-exon | TSC22D1 | 13 | + | ACTN4 | 19 | + |
| intron-exon | HLA-DRB1 | 6 | - | FGR | 1 | + |
| exon-exon | JUND | 19 | + | INS-IGF2 | 11 | - |
| intron-exon | MAP3K14 | 17 | + | RNA45SN3 | 21 | + |
| intron-exon | NFATC2 | 20 | + | DTX3L | 3 | + |
| exon-intron | DOT1L | 19 | - | COL6A1 | 21 | - |
| exon-intron | DOT1L | 19 | - | COL6A1 | 21 | - |
| intron-exon | PPP1R21 | 2 | - | MCOLN3 | 1 | - |
| intron-exon | FENDRR | 16 | + | PSMB8 | 6 | + |
| intron-exon | SFTPB | 2 | + | AK3 | 9 | - |
| exon-exon | SEMA6A | 5 | + | GOLGA8A | 15 | - |
| intron-exon | AFAP1L2 | 10 | - | FTSJ3 | 17 | - |
| exon-exon | PLA2G4F | 15 | + | LRP1 | 12 | - |
| exon-intron | VDAC1P1 | X | - | PER1 | 17 | + |
| exon-intron | SFTPA2 | 10 | + | RNR1 | MT | + |
| exon-intron | ANKHD1-EIF4EBP3 | 5 | + | L3MBTL4 | 18 | + |
| exon-intron | ATF4 | 22 | + | STX8 | 17 | - |
| exon-exon | TIMM23 | 10 | - | ATF4 | 22 | + |
| exon-exon | HSP90AB1 | 6 | - | MIGA2 | 9 | + |
| intron-exon | IFT57 | 3 | - | IFT57 | 3 | + |
| exon-exon | DCTN1 | 2 | - | OGDH | 7 | + |
| intron-exon | MYO9B | 19 | + | HSPA8 | 11 | - |
| intron-exon | ALPL | 1 | - | CBLB | 3 | + |
| exon-exon | YKT6 | 7 | + | YKT6 | 7 | - |
| exon-intron | SRA1 | 5 | - | BNC2 | 9 | + |
| intron-exon | SLC20A2 | 8 | + | ZNHIT6 | 1 | - |
| exon-exon | CAMK2N1 | 1 | + | ATF4 | 22 | + |
| exon-exon | RBCK1 | 20 | + | TIMM23B-AGAP6 | 10 | - |
| intron-exon | DEAF1 | 11 | - | HSPA4 | 5 | - |
| intron-exon | B4GALT5 | 20 | + | FBXW4 | 10 | + |
| intron-exon | PECAM1 | 17 | + | RHOA | 3 | + |
| exon-intron | TLE2 | 19 | + | EPAS1 | 2 | + |
| intron-exon | HFM1 | 1 | + | CFL1 | 11 | + |
| exon-exon | ND5 | MT | + | MYADM | 19 | + |
| intron-exon | PLCL1 | 2 | - | RNA45SN3 | 21 | + |
| exon-intron | STRADA | 17 | + | MTND2P28 | 1 | - |
| intron-exon | RIPOR3 | 20 | - | COTL1 | 16 | + |
| exon-exon | GNL1 | 6 | + | GNL1 | 6 | - |
| exon-exon | SDK2 | 17 | + | SDK2 | 17 | - |
| exon-exon | SERF1A | 5 | + | SMN1 | 5 | + |
| exon-exon | ND4 | MT | - | ND5 | MT | - |
| exon-exon | CTSD | 11 | - | DHX38 | 16 | - |
| exon-intron | RERE | 1 | - | IGK | 2 | - |
| intron-exon | CHD2 | 15 | - | OTUD5 | X | + |
| exon-exon | EVPL | 17 | + | MISP | 19 | + |
| exon-exon | EML2 | 19 | - | TRAF4 | 17 | + |
| exon-intron | ZSWIM4 | 19 | - | FN3KRP | 17 | + |
| exon-exon | NEAT1 | 11 | + | NEAT1 | 11 | - |
| exon-intron | LOC107984877 | 16 | - | ATF7IP2 | 16 | - |
| exon-exon | VPS13C | 15 | + | SUPT16H | 14 | + |
| exon-intron | ADA2 | 22 | + | AC137894.3 | 11 | - |
| exon-exon | COX1 | MT | - | TOB2 | 22 | - |
| exon-intron | ND6 | MT | - | ENPP7P2 | 3 | - |
| exon-intron | FOSB | 19 | - | TNRC18 | 7 | - |
| intron-exon | BRMS1L | 14 | - | NDRG2 | 14 | + |
| intron-exon | LOC105378326 | 10 | + | KIAA0100 | 17 | + |
| exon-exon | ATP1A1 | 1 | + | ZFP36 | 19 | + |
| intron-exon | XRCC5 | 2 | - | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | + |
| exon-exon | SOX7 | 8 | + | RAB1B | 11 | + |
| exon-intron | IFITM2 | 11 | + | SLCO4A1 | 20 | + |
| exon-intron | CD99 | Y | - | PTPRG | 3 | + |
| exon-intron | SMU1 | 9 | + | ATXN1 | 6 | - |
| exon-intron | IDI2 | 10 | - | LINC01915 | 18 | + |
| exon-intron | DENND3 | 8 | - | DENND3 | 8 | + |
| exon-exon | IGHG2 | 14 | + | IGHG3 | 14 | - |
| exon-exon | SMPD1 | 11 | - | SMPD1 | 11 | + |
| intron-exon | TANC1 | 2 | - | CEMIP2 | 9 | + |
| exon-intron | SAMHD1 | 20 | - | AOPEP | 9 | - |
| intron-exon | DMPK | 19 | + | FOSB | 19 | - |
| intron-exon | EXT1 | 8 | + | EIF4H | 7 | - |
| intron-exon | RNF213 | 17 | + | PSAP | 10 | - |
| exon-exon | ARID5B | 10 | + | CREB5 | 7 | + |
| intron-exon | ASL | 7 | + | DIAPH1 | 5 | + |
| intron-exon | IGFBP7 | 4 | - | HYAL2 | 3 | + |
| exon-intron | HLA-DRB5 | 6 | - | SRGAP2 | 1 | + |
| exon-exon | HMGCR | 5 | - | TP53INP2 | 20 | + |
| intron-exon | RAB37 | 17 | + | SPARCL1 | 4 | + |
| intron-exon | EVA1C | 21 | - | CTDSPL | 3 | + |
| intron-exon | MFN1 | 3 | - | EIF4G2 | 11 | + |
| intron-exon | WDR47 | 1 | + | C1orf116 | 1 | - |
| exon-intron | RILPL2 | 12 | + | LMNA | 1 | + |
| exon-exon | RNA45SN2 | 21 | - | GSDMB | 17 | - |
| intron-exon | STAT6 | 12 | - | STAT6 | 12 | + |
| intron-exon | PHC2 | 1 | - | C9orf78 | 9 | - |
| exon-intron | NEAT1 | 11 | + | ALDH3A2 | 17 | + |
| intron-exon | STPG2 | 4 | - | RAD50 | 5 | + |
| intron-exon | ADCY9 | 16 | + | CTDSPL | 3 | - |
| exon-intron | SH3D19 | 4 | + | LINC02166 | 16 | + |
| exon-exon | ZNF608 | 5 | + | SH3PXD2A | 10 | + |
| exon-intron | TAMALIN | 12 | - | SREBF2 | 22 | + |
| exon-exon | PRRC2B | 9 | + | STC1 | 8 | + |
| exon-intron | CFLAR | 2 | + | FLACC1 | 2 | + |
| exon-intron | MALAT1 | 11 | + | PTK2B | 8 | + |
| intron-exon | CMIP | 16 | + | CRIP2 | 14 | + |
| exon-exon | NDUFA10 | 2 | - | HLA-DQA1 | 6 | + |
| intron-exon | ZNF532 | 18 | - | VPS4B | 18 | - |
| exon-exon | LGALS4 | 19 | - | LGALS4 | 19 | + |
| exon-intron | USP7 | 16 | - | SLC12A4 | 16 | - |
| exon-exon | IGFBP5 | 2 | - | ARHGEF10L | 1 | + |
| intron-exon | C17orf67 | 17 | + | ITFG1 | 16 | + |
| exon-exon | RHOB | 2 | - | CLPTM1 | 19 | + |
| exon-exon | ND5 | MT | + | ND6 | MT | + |
| exon-intron | CAMKK2 | 12 | + | VAV2 | 9 | - |
| exon-exon | MORN1 | 1 | - | ND2 | MT | + |
| intron-exon | HBP1 | 7 | - | LRP1 | 12 | + |
| exon-intron | TMPRSS2 | 21 | + | LOC111099027 | 21 | + |
| exon-intron | ZNF542P | 19 | - | BMPR1B | 4 | - |
| exon-exon | RASA4DP | 7 | - | PHC2 | 1 | - |
| exon-exon | CD63 | 12 | + | VARS2 | 6 | + |
| exon-exon | RNF150 | 4 | + | CYTB | MT | - |
| exon-intron | RNA45SN1 | 21 | + | IL4I1 | 19 | - |
| exon-intron | HCCS | X | - | IQSEC1 | 3 | + |
| exon-exon | KLK3 | 19 | + | PSMD7 | 16 | + |
| exon-exon | CAPS | 19 | - | VMAC | 19 | - |
| intron-exon | PLCB1 | 20 | - | TAX1BP1 | 7 | + |
| exon-intron | GIT2 | 12 | + | TRMT1 | 19 | - |
| exon-exon | KLC4 | 6 | + | CTSS | 1 | - |
| intron-exon | LOC105369743 | 12 | - | NIBAN1 | 1 | - |
| exon-intron | ATG13 | 11 | - | FTL | 19 | + |
| intron-exon | RORA | 15 | - | KLK3 | 19 | - |
| exon-intron | ZNF609 | 15 | + | PRKCE | 2 | - |
| exon-exon | ACAA1 | 3 | - | ACAA1 | 3 | + |
| intron-exon | ARL6IP5 | 3 | - | PCYOX1 | 2 | - |
| intron-exon | LOC105370047 | 12 | + | RNA45SN1 | 21 | + |
| exon-exon | PFKL | 21 | - | RNA45SN1 | 21 | + |
| exon-intron | SRRM5 | 19 | + | ZNF274 | 19 | + |
| intron-exon | MAEA | 4 | - | TNPO2 | 19 | - |
| exon-exon | IGKV2-28 | 2 | - | IGKV3-11 | 2 | - |
| exon-intron | CTSD | 11 | + | TNFAIP8 | 5 | + |
| exon-exon | IGKC | 2 | + | IGKC | 2 | - |
| intron-exon | KLF6 | 10 | + | RNA45SN3 | 21 | + |
| exon-exon | GRN | 17 | - | GRN | 17 | + |
| exon-intron | HIRIP3 | 16 | - | ARMC4 | 10 | + |
| exon-intron | C4B | 6 | - | DIDO1 | 20 | + |
| exon-intron | IGHM | 14 | + | USP4 | 3 | - |
| exon-intron | DELE1 | 5 | - | ARAP3 | 5 | - |
| exon-exon | STX16-NPEPL1 | 20 | + | RBM15B | 3 | - |
| intron-exon | ITPR1 | 3 | - | CDC42BPG | 11 | - |
| exon-intron | THBS1 | 15 | + | IGF2BP3 | 7 | + |
| exon-exon | GAGE2A | X | - | RNA45SN3 | 21 | + |
| exon-exon | IGHG2 | 14 | + | IGHG1 | 14 | + |
| intron-exon | ACOXL | 2 | + | IGKC | 2 | - |
| exon-intron | PPM1F | 22 | - | HDAC4 | 2 | - |
| intron-exon | IGL | 22 | - | NDRG2 | 14 | - |
| exon-intron | IGLC2 | 22 | - | IGL | 22 | - |
| exon-exon | CSRP1 | 1 | - | CSRP1 | 1 | + |
| intron-exon | TTC39C | 18 | - | ND6 | MT | + |
| exon-intron | PDCD4 | 10 | + | HERC2P3 | 15 | - |
| intron-exon | SCAMP4 | 19 | + | LDLR | 19 | + |
| intron-exon | SVIL | 10 | + | SRMP2 | 14 | - |
| exon-intron | RNF166 | 16 | + | EPN2-AS1 | 17 | - |
| intron-exon | PRRC2A | 6 | + | AMFR | 16 | + |
| intron-exon | GPI | 19 | - | CDC37 | 19 | + |
| intron-exon | BRIP1 | 17 | + | ANKS3 | 16 | - |
| exon-exon | RNA45SN2 | 21 | - | RNA45SN1 | 21 | + |
| exon-intron | LLGL2 | 17 | + | SORBS1 | 10 | + |
| exon-intron | RBP5 | 12 | - | ENOX1 | 13 | + |
| exon-intron | TMEM176B | 7 | - | SNIP1 | 1 | - |
| exon-intron | SCAF11 | 12 | + | SCAF11 | 12 | - |
| exon-intron | ITGB4 | 17 | + | USP37 | 2 | - |
| exon-exon | TTYH3 | 7 | - | TTYH3 | 7 | + |
| intron-exon | CECR2 | 22 | - | ADA2 | 22 | - |
| exon-exon | BAZ2A | 12 | - | CDK5RAP3 | 17 | + |
| intron-exon | ADCY9 | 16 | - | BGN | X | + |
| intron-exon | DNAJC5 | 20 | - | HNRNPL | 19 | + |
| intron-exon | CSF1 | 1 | + | NPHP4 | 1 | - |
| intron-exon | ZNF787 | 19 | + | POMT2 | 14 | + |
| intron-exon | JADE3 | X | - | FSTL1 | 3 | - |
| intron-exon | TNS1 | 2 | + | PRR29 | 17 | + |
| exon-exon | POU6F1 | 12 | - | QSOX1 | 1 | - |
| exon-exon | IGHA1 | 14 | - | SPTAN1 | 9 | + |
| exon-exon | EXOSC10 | 1 | + | IDO1 | 8 | - |
| exon-intron | TMCC1 | 3 | - | SNRPB | 20 | + |
| intron-exon | ND5 | MT | - | ND1 | MT | - |
| exon-intron | SET | 9 | - | TNS1 | 2 | - |
| exon-intron | LLGL2 | 17 | - | PXN | 12 | + |
| intron-exon | SEC14L1 | 17 | + | OS9 | 12 | + |
| exon-intron | SSRP1 | 11 | - | RPTOR | 17 | - |
| exon-exon | ACTB | 7 | - | ACTB | 7 | + |
| exon-exon | LTBP4 | 19 | + | STAB1 | 3 | + |
| exon-intron | ATG3 | 3 | + | POTEE | 2 | - |
| exon-intron | CUL9 | 6 | - | IMPA2 | 18 | - |
| exon-exon | PHRF1 | 11 | - | C3 | 19 | + |
| exon-intron | BCAM | 19 | - | KLC1 | 14 | + |
| exon-intron | R3HDM2 | 12 | + | IGK | 2 | + |
| exon-intron | SRRM2 | 16 | - | JAG1 | 20 | + |
| intron-exon | CNBP | 3 | + | POU2F1 | 1 | + |
| exon-exon | MOB1A | 2 | + | IQGAP1 | 15 | + |
| intron-exon | SRBD1 | 2 | - | ANKRD10 | 13 | - |
| intron-exon | LOC102606465 | 1 | - | ACVR1 | 2 | + |
| exon-exon | MOB1A | 2 | - | ACVR1 | 2 | - |
| exon-intron | SLC12A4 | 16 | - | AP003071.4 | 11 | + |
| exon-exon | LOC105372976 | 22 | - | LOC105372976 | 22 | + |
| intron-exon | TMEM94 | 17 | + | ELAPOR2 | 7 | + |
| intron-exon | PPP4C | 16 | - | RNF144A | 2 | - |
| exon-exon | FBXO6 | 1 | - | CCNL2 | 1 | - |
| exon-intron | SCD | 10 | - | MUC1 | 1 | - |
| intron-exon | PRKG1 | 10 | + | VDAC3P1 | 14 | - |
| intron-exon | MAST3 | 19 | + | EHMT2 | 6 | + |
| exon-exon | NDRG2 | 14 | - | CALR | 19 | + |
| exon-intron | ITGAL | 16 | - | SH2B1 | 16 | + |
| exon-exon | APOL6 | 22 | + | GEMIN6 | 2 | + |
| exon-intron | PSPC1 | 13 | - | CP | 3 | + |
| exon-exon | THEMIS2 | 1 | - | THEMIS2 | 1 | + |
| exon-exon | PPP1R9B | 17 | + | FLNA | X | - |
| intron-exon | ATP2A2 | 12 | - | IGHM | 14 | - |
| exon-exon | ICAM2 | 17 | + | RNA45SN3 | 21 | + |
| exon-exon | SMAP2 | 1 | - | SMAP2 | 1 | + |
| intron-exon | BMERB1 | 16 | + | MAGEF1 | 3 | - |
| exon-exon | PLCB2 | 15 | + | PLCB2 | 15 | - |
| exon-intron | UQCR10 | 22 | + | FOXP1 | 3 | + |
| exon-exon | SFSWAP | 12 | - | SFSWAP | 12 | + |
| exon-exon | MORC2 | 22 | + | MORC2 | 22 | - |
| intron-exon | IGHG3 | 14 | + | HSPG2 | 1 | - |
| exon-intron | ZNF578 | 19 | + | DANT2 | X | - |
| exon-exon | IGHJ6 | 14 | - | IGHA1 | 14 | - |
| intron-exon | BORCS5 | 12 | - | NUDT3 | 6 | + |
| exon-intron | RNA45SN2 | 21 | + | RNA18SP5 | 21 | + |
| exon-exon | MYOF | 10 | + | PEX26 | 22 | + |
| exon-intron | SEPTIN2 | 2 | - | DCAF1 | 3 | - |
| exon-exon | MEF2C | 5 | + | RNA45SN2 | 21 | - |
| exon-exon | FLJ42627 | 16 | + | SFTPC | 8 | + |
| exon-intron | CD74 | 5 | + | PPM1M | 3 | + |
| exon-exon | ATP6 | MT | - | HAAO | 2 | - |
| exon-exon | NEAT1 | 11 | - | NEAT1 | 11 | + |
| exon-intron | HMCN2 | 9 | - | CABIN1 | 22 | + |
| exon-intron | NR1D1 | 17 | + | TRPC4AP | 20 | + |
| exon-exon | SEMA4D | 9 | + | RNA45SN1 | 21 | + |
| intron-exon | ELL | 19 | + | R3HCC1 | 8 | + |
| intron-exon | RPLP2 | 11 | - | NEK4 | 3 | - |
| exon-exon | COL3A1 | 2 | - | HSH2D | 19 | + |
| exon-exon | DNTTIP1 | 20 | + | PLEKHH3 | 17 | - |
| intron-exon | PPP4R2 | 3 | - | CTPS1 | 1 | + |
| exon-exon | LOC112268284 | 21 | - | IGHG1 | 14 | - |
| exon-intron | RNA45SN3 | 21 | + | VEGFB | 11 | + |
| exon-intron | SMO | 7 | + | CAMK1D | 10 | - |
| exon-intron | PITPNM1 | 11 | - | FAM83H-AS1 | 8 | - |
| exon-exon | RNA45SN1 | 21 | - | MEGF6 | 1 | + |
| intron-exon | DPYSL3 | 5 | + | SFTPB | 2 | - |
| exon-exon | LRP3 | 19 | - | KIF26A | 14 | + |
| exon-exon | TMEM259 | 19 | + | MBOAT7 | 19 | - |
| intron-exon | RNA28SP | 21 | - | H19 | 11 | - |
| exon-exon | RNA45SN3 | 21 | - | C1QA | 1 | + |
| intron-exon | PSME4 | 2 | - | NEAT1 | 11 | - |
| exon-intron | AHNAK | 11 | + | TBC1D5 | 3 | - |
| exon-intron | HNRNPA3 | 2 | - | PTPN1 | 20 | + |
| exon-intron | HNRNPA3 | 2 | - | PTPN1 | 20 | + |
| exon-intron | EMP2 | 16 | + | LOC105377547 | 4 | - |
| exon-intron | NCL | 2 | + | FOXJ3 | 1 | - |
| intron-exon | RGPD2 | 2 | - | PCBP1 | 2 | + |
| exon-intron | XPNPEP1 | 10 | + | NAV2 | 11 | + |
| exon-exon | KLHDC3 | 6 | + | KLHDC3 | 6 | - |
| exon-exon | IGKC | 2 | + | TCP11L1 | 11 | + |
| exon-exon | IGKC | 2 | - | HLA-K | 6 | - |
| intron-exon | LY96 | 8 | - | ALDH18A1 | 10 | + |
| exon-intron | DNAH1 | 3 | - | UBE2J2 | 1 | - |
| exon-exon | CAPN5 | 11 | - | CYP2S1 | 19 | - |
| intron-exon | SLC44A5 | 1 | + | LOC107984138 | 16 | - |
| exon-intron | NEK6 | 9 | - | TPM4 | 19 | - |
| exon-exon | GPX3 | 5 | + | GPX3 | 5 | - |
| exon-intron | MMP10 | 11 | - | EXOC1 | 4 | + |
| exon-exon | IGHG3 | 14 | - | GOLGA8B | 15 | - |
| exon-intron | PHC1 | 12 | + | CERS4 | 19 | - |
| intron-exon | NMD3 | 3 | - | SMARCD3 | 7 | + |
| exon-intron | SLC38A1 | 12 | + | GBF1 | 10 | - |
| exon-intron | COX2 | MT | - | CCND3 | 6 | - |
| exon-intron | ATXN7L1 | 7 | + | GAS6-AS1 | 13 | + |
| exon-intron | UNC13B | 9 | - | DDTL | 22 | - |
| exon-exon | APBB1IP | 10 | + | ACTG1 | 17 | - |
| exon-exon | UBE2L6 | 11 | - | C1S | 12 | - |
| intron-exon | TBL1XR1 | 3 | - | LOC107986800 | 7 | + |
| exon-exon | ND2 | MT | - | PLEC | 8 | + |
| intron-exon | NTRK3 | 15 | - | SLC8B1 | 12 | - |
| exon-intron | MALAT1 | 11 | + | HS1BP3 | 2 | - |
| exon-exon | NEAT1 | 11 | - | C3 | 19 | - |
| exon-intron | ABCA1 | 9 | - | EIF4E | 4 | - |
| exon-intron | A2M | 12 | - | KLRG1 | 12 | + |
| exon-exon | IGHG3 | 14 | - | IGHG1 | 14 | - |
| exon-exon | IGHA1 | 14 | + | IGHA1 | 14 | - |
| exon-intron | NEAT1 | 11 | - | RNA18SP5 | 21 | + |
| intron-exon | SNX32 | 11 | - | TALAM1 | 11 | - |
| exon-exon | IGKC | 2 | - | VAMP5 | 2 | + |
| intron-exon | C3orf52 | 3 | - | HAX1 | 1 | + |
| intron-exon | NDC80 | 18 | - | PDCD6IP | 3 | - |
| exon-intron | SDHAP1 | 3 | + | MAEA | 4 | - |
| intron-exon | TATDN2 | 3 | - | RNA45SN3 | 21 | + |
| intron-exon | CDH13 | 16 | + | LOC102724163 | 16 | + |
| intron-exon | SCN4B | 11 | - | COL6A1 | 21 | + |
| exon-exon | COL1A1 | 17 | - | LUC7L | 16 | - |
| exon-intron | NMRAL1 | 16 | - | ANKH | 5 | - |
| exon-exon | CALHM6 | 6 | - | FAM50A | X | - |
| exon-exon | CSRP1 | 1 | - | CSRP1 | 1 | + |
| exon-exon | PTMAP2 | 5 | + | IGHA1 | 14 | - |
| exon-exon | TCOF1 | 5 | + | EIF5A | 17 | + |
| exon-intron | EPS8L1 | 19 | - | C15orf39 | 15 | - |
| intron-exon | BMERB1 | 16 | - | PAPOLA | 14 | + |
| intron-exon | KDM1A | 1 | + | LUZP1 | 1 | + |
| exon-intron | SCMH1 | 1 | + | SLFNL1-AS1 | 1 | + |
| exon-intron | TSPAN14 | 10 | - | ACTN4 | 19 | + |
| exon-intron | GAB2 | 11 | - | ST7 | 7 | + |
| exon-intron | IGFBP4 | 17 | - | ATP11A | 13 | + |
| exon-exon | IGHG1 | 14 | + | IGHG3 | 14 | + |
| exon-exon | HLA-DQA1 | 6 | - | INCA1 | 17 | - |
| exon-exon | RNA45SN3 | 21 | - | KIAA0319L | 1 | - |
| intron-exon | DYRK1A | 21 | - | CLK3 | 15 | + |
| intron-exon | NCOR2 | 12 | + | RAB25 | 1 | - |
| exon-intron | PNPO | 17 | + | LGSN | 6 | + |
| exon-exon | TMEM37 | 2 | + | UBAP2 | 9 | - |
| exon-exon | IGHG1 | 14 | + | RNA45SN1 | 21 | - |
| exon-exon | UCKL1 | 20 | - | RNA45SN2 | 21 | + |
| intron-exon | LOC100506639 | 5 | + | UCP2 | 11 | - |
| intron-exon | IGH | 14 | + | IGHA1 | 14 | + |
| exon-exon | SCNN1A | 12 | - | RNA45SN3 | 21 | + |
| exon-intron | TBC1D17 | 19 | - | MEF2C | 5 | + |
| exon-exon | ABCC6P2 | 16 | - | CDC25B | 20 | - |
| exon-intron | KIFAP3 | 1 | - | MUC20 | 3 | - |
| intron-exon | LINC02008 | 3 | + | MMADHC | 2 | - |
| exon-exon | ABCA9 | 17 | - | DCN | 12 | + |
| exon-intron | BBS2 | 16 | - | SLMAP | 3 | - |
| intron-exon | CTNNAL1 | 9 | - | ZBTB7C | 18 | - |
| intron-exon | NBPF1 | 1 | - | TAPT1 | 4 | - |
| exon-exon | FBXL4 | 6 | + | APBA2 | 15 | + |
| exon-exon | JAK1 | 1 | + | PPIEL | 1 | - |
| exon-intron | CKB | 14 | - | AC119674.1 | 1 | + |
| exon-exon | GAGE13 | X | + | SIAE | 11 | - |
| exon-intron | SLC35E1 | 19 | - | CEP164 | 11 | - |
| intron-exon | CC2D1B | 1 | + | CC2D1B | 1 | - |
| exon-exon | HSPA8 | 11 | + | HSPA8 | 11 | - |
| intron-exon | TFDP2 | 3 | - | UBE2J1 | 6 | - |
| exon-exon | USP34 | 2 | - | USP34 | 2 | + |
| exon-exon | LINC01061 | 4 | + | LINC00265 | 7 | + |
| intron-exon | MAMLD1 | X | - | GNL2 | 1 | - |
| exon-exon | AFF4 | 5 | + | LINC00205 | 21 | - |
| intron-exon | GRK3 | 22 | - | CRYBB2P1 | 22 | - |
| exon-intron | CCDC18-AS1 | 1 | - | FRMD4A | 10 | + |
| exon-intron | DSTN | 20 | + | FBXO31 | 16 | - |
| exon-intron | COPA | 1 | + | RASA4 | 7 | - |
| exon-exon | COX15 | 10 | - | TRAPPC4 | 11 | + |
| exon-exon | ULK1 | 12 | - | ULK1 | 12 | + |
| intron-exon | DIPK1A | 1 | - | TMEM59 | 1 | + |
| exon-exon | TECPR2 | 14 | + | ATXN2 | 12 | - |
| exon-intron | MTG2 | 20 | + | MED12L | 3 | + |
| intron-exon | PNPLA7 | 9 | + | APOE | 19 | + |
| intron-exon | FAM182B | 20 | + | FAM182A | 20 | + |
| exon-exon | HSP90AB3P | 4 | - | BTN2A3P | 6 | + |
| exon-exon | LOC100132287 | 1 | + | LOC100133331 | 1 | + |
| exon-exon | SNHG1 | 11 | + | SNHG1 | 11 | - |
| exon-exon | TMEM9 | 1 | + | NEDD8-MDP1 | 14 | + |
| exon-exon | KCNMB1 | 5 | - | NEAT1 | 11 | + |
| exon-intron | SUMF1 | 3 | + | PMM2 | 16 | - |
| exon-intron | CELSR3 | 3 | - | NCKIPSD | 3 | - |
| exon-exon | ND4 | MT | - | PHC3 | 3 | - |
| exon-intron | COX1 | MT | - | GTF2IP4 | 7 | - |
| exon-exon | RFWD3 | 16 | + | GRN | 17 | - |
| exon-exon | PC | 11 | - | PC | 11 | + |
| exon-exon | PC | 11 | - | PC | 11 | + |
| exon-intron | GNG2 | 14 | + | PSMG2 | 18 | - |
| exon-exon | CTSS | 1 | + | CTSS | 1 | - |
| exon-exon | HBD | 11 | - | HBB | 11 | - |
| exon-intron | RNASE2 | 14 | + | MYO1F | 19 | + |
| exon-exon | SSR4 | X | - | LOC101929240 | 17 | + |
| exon-intron | SUN2 | 22 | + | GTPBP1 | 22 | + |
| exon-intron | LOC100996442 | 1 | + | LOC105373056 | 1 | + |
| exon-exon | PLCB2 | 15 | - | JUP | 17 | - |
| exon-exon | RBM18 | 9 | - | S100A9 | 1 | - |
| exon-exon | GORASP2 | 2 | - | LDHA | 11 | + |
| exon-exon | C16orf72 | 16 | - | LOC101928344 | 19 | - |
| exon-exon | RNA45SN1 | 21 | - | ITGAM | 16 | + |
| exon-exon | TBC1D9 | 4 | - | TBC1D9 | 4 | + |
| intron-exon | TJP1 | 15 | + | PRKAR1A | 17 | + |
| intron-exon | TRA | 14 | + | EFNB2 | 13 | - |
| exon-exon | MEF2D | 1 | + | DCLRE1C | 10 | - |
| exon-exon | SF3A1 | 22 | - | SF3A1 | 22 | + |
| exon-exon | ARF1 | 1 | - | ARF1 | 1 | + |
| exon-exon | RPL39P3 | 6 | + | RNA45SN1 | 21 | + |
| exon-exon | NCOR1 | 17 | + | RNA45SN2 | 21 | + |
| exon-intron | SUZ12P1 | 17 | + | THRAP3 | 1 | + |
| exon-exon | MTPN | 7 | + | LUZP6 | 7 | + |
| exon-exon | LOC105372860 | 22 | + | TP53INP1 | 8 | - |
| exon-exon | ND4 | MT | - | ITPR3 | 6 | - |
| intron-exon | ZYX | 7 | - | IRAG2 | 12 | - |
| exon-exon | PC | 11 | - | MIEN1 | 17 | - |
| exon-exon | TSPO | 22 | + | MPO | 17 | - |
| exon-exon | FAM157A | 3 | - | SRCAP | 16 | - |
| exon-exon | P2RX1 | 17 | + | P2RX1 | 17 | - |
| exon-intron | EIF2AK1 | 7 | - | DBNL | 7 | + |
| exon-intron | PANX1 | 11 | - | CDV3 | 3 | - |
| exon-exon | PNPT1 | 2 | - | ASAP1 | 8 | + |
| intron-exon | ANKRD11 | 16 | + | ND4L | MT | - |
| exon-exon | ACTB | 7 | + | ACTB | 7 | - |
| intron-exon | TXLNGY | Y | - | TXLNGY | Y | + |
| exon-exon | BIN2P1 | 4 | + | ANKRD17 | 4 | - |
| exon-intron | PPIP5K1P1-CATSPER2 | 15 | - | ARNTL | 11 | + |
| intron-exon | RALGAPA2 | 20 | - | ATP6 | MT | - |
| exon-exon | MYL12A | 18 | - | MYL12A | 18 | + |
| exon-exon | DHX38 | 16 | - | DHX38 | 16 | + |
| exon-exon | MYL12A | 18 | - | MYL12A | 18 | + |
| intron-exon | BCL2L2-PABPN1 | 14 | + | NFATC3 | 16 | + |
| intron-exon | ARHGDIB | 12 | + | ARHGDIB | 12 | - |
| intron-exon | ALOX5 | 10 | - | ABCA13 | 7 | - |
| exon-intron | BPTF | 17 | + | IL5RA | 3 | + |
| exon-exon | RNA45SN3 | 21 | - | RNA45SN1 | 21 | + |
| exon-intron | TRIM38 | 6 | + | KIAA0232 | 4 | + |
| exon-exon | AP3D1 | 19 | - | LCP1 | 13 | - |
| exon-exon | TLE3 | 15 | + | MLKL | 16 | - |
| exon-exon | MIDN | 19 | + | NEAT1 | 11 | - |
| exon-exon | MYO18A | 17 | + | MYO18A | 17 | - |
| exon-intron | DEFA3 | 8 | + | DGCR8 | 22 | + |
| intron-exon | GAK | 4 | + | ARHGEF1 | 19 | - |
| exon-intron | VPS37B | 12 | - | ARFGEF1 | 8 | - |
| exon-exon | AATF | 17 | - | MPO | 17 | + |
| exon-exon | BAZ2A | 12 | + | LOC104968399 | 18 | - |
| exon-intron | CDK19 | 6 | + | COX3 | MT | + |
| exon-intron | MPO | 17 | + | LOC106694316 | 17 | + |
| exon-intron | LST1 | 6 | + | SUSD6 | 14 | + |
| exon-exon | PSMF1 | 20 | + | SCNN1A | 12 | + |
| intron-exon | SIK3 | 11 | + | YY1AP1 | 1 | - |
| intron-exon | MAP7D1 | 1 | + | CARD6 | 5 | - |
| intron-exon | ST3GAL3 | 1 | + | TMC8 | 17 | - |
| exon-exon | FCRLA | 1 | - | FCRLA | 1 | + |
| exon-intron | DR1 | 1 | - | DRAM1 | 12 | + |
| intron-exon | ERG | 21 | - | RETN | 19 | + |
| exon-exon | BAHD1 | 15 | - | GNAI2 | 3 | + |
| exon-intron | BPTF | 17 | + | LOC100996442 | 1 | - |
| intron-exon | LOC107985284 | 19 | - | DOK3 | 5 | - |
| exon-exon | CTSH | 15 | - | LOC284454 | 19 | + |
| exon-exon | ND6 | MT | + | UBAP2L | 1 | + |
| exon-intron | KMT2D | 12 | - | GOLPH3 | 5 | - |
| exon-intron | LINC00623 | 1 | + | LOC730257 | 1 | - |
| exon-exon | ND5 | MT | + | NEAT1 | 11 | + |
| intron-exon | MRPL43 | 10 | - | SEMA4G | 10 | + |
| intron-exon | RPS29 | 14 | - | RNA45SN1 | 21 | + |
| exon-exon | IFI30 | 19 | - | IFI30 | 19 | + |
| exon-exon | CTCF | 16 | + | CTCF | 16 | - |
| exon-exon | APMAP | 20 | + | APMAP | 20 | - |
| exon-intron | SUOX | 12 | - | RC3H2 | 9 | - |
| exon-exon | RALB | 2 | - | APOOL | X | + |
| intron-exon | CHI3L1 | 1 | + | ESYT1 | 12 | - |
| intron-exon | MYH9 | 22 | + | RUNDC1 | 17 | - |
| intron-exon | ITGAM | 16 | + | AP1G2 | 14 | - |
| intron-exon | MCM5 | 22 | + | LOC105374071 | 3 | + |
| exon-exon | AZU1 | 19 | - | MALAT1 | 11 | + |
| exon-exon | PCBP1 | 2 | - | PCBP1 | 2 | + |
| exon-exon | TPT1 | 13 | - | RNA45SN1 | 21 | + |
| exon-exon | YWHAB | 20 | - | YWHAB | 20 | + |
| exon-intron | ARSA | 22 | + | ANKLE2 | 12 | + |
| intron-exon | PARP8 | 5 | + | ND5 | MT | - |
| exon-exon | HLA-E | 6 | + | LRRFIP1 | 2 | + |
| exon-intron | HLA-E | 6 | + | LINC01138 | 1 | + |
| exon-intron | CSF3R | 1 | + | CSF3R | 1 | - |
| exon-exon | RNH1 | 11 | - | RNA45SN3 | 21 | + |
| exon-exon | SSRP1 | 11 | - | SSRP1 | 11 | + |
| exon-exon | MOGS | 2 | - | HBB | 11 | - |
| exon-exon | CCDC57 | 17 | - | CCDC57 | 17 | + |
| intron-exon | NBPF10 | 1 | - | NBPF25P | 1 | - |
| exon-exon | ASCC2 | 22 | + | ASCC2 | 22 | - |
| intron-exon | ATP11A | 13 | - | HLA-E | 6 | + |
| exon-exon | LIG3 | 17 | - | FLOT1 | 6 | - |
| exon-exon | EML3 | 11 | + | RANBP2 | 2 | + |
| exon-exon | SLCO5A1 | 8 | + | KMT2C | 7 | - |
| intron-exon | FBXO34 | 14 | + | CTB-41I6.1 | 17 | + |
| exon-intron | CAPN3 | 15 | - | ANKH | 5 | - |
| intron-exon | CDH11 | 16 | + | MYO15B | 17 | + |
| exon-exon | DAXX | 6 | + | DAXX | 6 | - |
| exon-intron | KDM5B | 1 | - | RNR2 | MT | + |
| exon-exon | EIF3CL | 16 | + | PCYT1A | 3 | + |
| exon-intron | NEAT1 | 11 | - | LTF | 3 | - |
| exon-intron | CCHCR1 | 6 | + | CDA | 1 | + |
| intron-exon | LOC105377771 | 5 | + | DIP2A | 21 | - |
| exon-intron | ZYX | 7 | - | RHOG | 11 | + |
| exon-intron | MROH1 | 8 | + | OXSR1 | 3 | + |
| exon-intron | FAM168B | 2 | + | FAM107B | 10 | - |
| exon-intron | MALAT1 | 11 | + | XPNPEP1 | 10 | - |
| exon-intron | CKAP4 | 12 | - | STYXL1 | 7 | - |
| exon-intron | C11orf21 | 11 | + | TSPAN32 | 11 | + |
| exon-exon | SP1 | 12 | - | TUBB | 6 | + |
| exon-intron | ZNF589 | 3 | - | STAG1 | 3 | + |
| intron-exon | DAZAP1 | 19 | + | IDH3G | X | + |
| exon-intron | DGKG | 3 | - | TECPR2 | 14 | - |
| exon-exon | SYNE1 | 6 | - | CEACAM21 | 19 | + |
| exon-exon | EML3 | 11 | + | RUFY2 | 10 | - |
| exon-exon | CTSZ | 20 | + | CTSZ | 20 | - |
| exon-intron | SELPLG | 12 | + | ASMTL | Y | - |
| exon-intron | ATP6 | MT | + | PTBP1 | 19 | + |
| exon-intron | NFKB1 | 4 | + | UBE2E2 | 3 | - |
| intron-exon | OSBPL1A | 18 | + | B2M | 15 | - |
| exon-intron | FKBP15 | 9 | + | RNR2 | MT | + |
| intron-exon | RUFY1 | 5 | - | ZFYVE9 | 1 | - |
| intron-exon | IGL | 22 | + | PXN | 12 | + |
| exon-exon | TFE3 | X | - | TFE3 | X | + |
| intron-exon | LOC100133315 | 11 | + | HSP90B1 | 12 | - |
| exon-exon | CHD2 | 15 | - | VMP1 | 17 | + |
| intron-exon | PACS1 | 11 | + | DENND1C | 19 | - |
| exon-exon | PHF21A | 11 | - | RNA45SN1 | 21 | - |
| exon-intron | SPTAN1 | 9 | - | LOC101928004 | 6 | + |
| intron-exon | VPS28 | 8 | - | MGAT1 | 5 | + |
| intron-exon | ARHGAP44 | 17 | + | EIF4B | 12 | + |
| intron-exon | DNAJC21 | 5 | + | LOC100131254 | 8 | + |
| exon-exon | YWHAH | 22 | + | YWHAH | 22 | - |
| exon-exon | ACTB | 7 | - | ATXN2L | 16 | - |
| exon-exon | ANKRD11 | 16 | + | S100A9 | 1 | + |
| exon-intron | SPECC1 | 17 | + | CDC27 | 17 | - |
| intron-exon | SLC1A2 | 11 | - | SNTB2 | 16 | + |
| intron-exon | USP47 | 11 | - | CTDSP2 | 12 | + |
| intron-exon | INSYN2A | 10 | - | TFDP2 | 3 | - |
| exon-exon | RAPGEF1 | 9 | + | RAPGEF1 | 9 | - |
| exon-intron | KMT2D | 12 | - | ITPRIP | 10 | - |
| exon-exon | TRIM66 | 11 | + | SH3GLB1 | 1 | + |
| exon-exon | FOS | 14 | + | MAST2 | 1 | + |
| exon-intron | LRTOMT | 11 | - | MTSS2 | 16 | - |
| exon-exon | TFCP2 | 12 | + | TFCP2 | 12 | - |
| exon-intron | RIPOR2 | 6 | - | STIM1 | 11 | + |
| exon-exon | TM7SF3 | 12 | + | TM7SF3 | 12 | - |
| intron-exon | EGLN3 | 14 | + | BAZ1A | 14 | + |
| exon-intron | RAD51C | 17 | - | CLEC12A | 12 | + |
| intron-exon | CD58 | 1 | + | ARFGEF1 | 8 | + |
| exon-intron | ACTB | 7 | + | CSGALNACT2 | 10 | + |
| exon-exon | MIA3 | 1 | - | PABPC1L | 20 | - |
| intron-exon | STIM1 | 11 | + | INO80D | 2 | - |
| exon-exon | DEFA1B | 8 | + | SRGN | 10 | + |
| exon-exon | RRP12 | 10 | - | ARRB1 | 11 | + |
| intron-exon | RABGAP1L | 1 | - | BRD2 | 6 | - |
| exon-intron | LOC644661 | 9 | - | PRH1-PRR4 | 12 | - |
| exon-exon | CYTB | MT | - | SARAF | 8 | - |
| intron-exon | SS18 | 18 | + | RINT1 | 7 | + |
| exon-intron | RNA45SN2 | 21 | + | RNA28SP | 21 | + |
| exon-exon | RNA45SN1 | 21 | + | ARF3 | 12 | - |
| exon-intron | RALBP1 | 18 | - | GBE1 | 3 | + |
| intron-exon | MTATP6P1 | 1 | - | ATP6 | MT | + |
| exon-exon | TMOD3 | 15 | - | MIAT | 22 | - |
| exon-exon | KIF3B | 20 | - | SMC2 | 9 | - |
| exon-exon | HLA-B | 6 | + | HLA-B | 6 | - |
| intron-exon | LOC112163626 | 12 | + | SALL2 | 14 | - |
| intron-exon | FAM78B | 1 | - | MEF2D | 1 | - |
| exon-intron | ARAP1 | 11 | + | GEMIN7 | 19 | + |
| exon-exon | ARMC10P1 | 3 | + | TRIOBP | 22 | + |
| exon-intron | MPDU1 | 17 | - | TRIM15 | 6 | - |
| intron-exon | PAN3 | 13 | + | RAPGEF5 | 7 | - |
| intron-exon | CAMTA1 | 1 | - | SIK1B | 21 | + |
| intron-exon | USP35 | 11 | + | PXN | 12 | + |
| exon-exon | H4C8 | 6 | - | LOC105374985 | 6 | - |
| exon-exon | ECH1 | 19 | + | ECH1 | 19 | - |
| exon-exon | ECH1 | 19 | + | ECH1 | 19 | - |
| intron-exon | GTF2IRD2B | 7 | - | YWHAZ | 8 | - |
| intron-exon | RPS29 | 14 | - | AP2M1 | 3 | + |
| exon-exon | LINC00174 | 7 | + | RPLP0P6 | 2 | + |
| exon-exon | SLC6A14 | X | + | MED28 | 4 | - |
| exon-exon | TRIM14 | 9 | - | PATL1 | 11 | - |
| exon-intron | MYD88 | 3 | + | TP53I11 | 11 | - |
| intron-exon | SLC35F5 | 2 | + | FBXO30 | 6 | - |
| exon-exon | PDIA3 | 15 | - | PDIA3 | 15 | + |
| exon-exon | ECH1 | 19 | + | ECH1 | 19 | - |
| exon-exon | EEF1A1P12 | 2 | - | TOP1 | 20 | + |
| exon-exon | HADHA | 2 | - | HBEGF | 5 | + |
| intron-exon | PDLIM5 | 4 | + | PDLIM5 | 4 | - |
| exon-exon | RNA45SN3 | 21 | - | RNA45SN3 | 21 | + |
| exon-exon | ING4 | 12 | - | COX3 | MT | - |
| intron-exon | PITX1 | 5 | + | SH3BGRL3 | 1 | + |
| exon-exon | SORT1 | 1 | - | EEF1D | 8 | - |
| exon-exon | WDR54 | 2 | + | RNA45SN1 | 21 | + |
| exon-intron | CHI3L1 | 1 | - | THBS3-AS1 | 1 | + |
| exon-intron | NUMBL | 19 | - | TYK2 | 19 | + |
| exon-intron | INTS3 | 1 | - | L3MBTL4 | 18 | - |
| intron-exon | DENND2B | 11 | + | AKIP1 | 11 | + |
| exon-intron | ZNF672 | 1 | - | NME7 | 1 | + |
| exon-intron | IGHG1 | 14 | + | TMEM201 | 1 | - |
| exon-exon | TERF2 | 16 | + | NNMT | 11 | - |
| exon-intron | CD74 | 5 | + | LINC-PINT | 7 | - |
| intron-exon | CREM | 10 | + | HERPUD1 | 16 | + |
| intron-exon | EIF4G2 | 11 | + | APOBEC3C | 22 | + |
| exon-intron | SPDYE2 | 7 | + | POLR2J3 | 7 | - |
| exon-exon | PSME2 | 14 | + | ATF4 | 22 | + |
| exon-intron | TMEM184B | 22 | - | VPS72 | 1 | + |
| intron-exon | CNTLN | 9 | + | FADS2 | 11 | - |
| exon-intron | LOC100130345 | 3 | + | C3orf49 | 3 | + |
| exon-intron | APOL1 | 22 | - | AP003108.2 | 11 | - |
| exon-intron | OSBP2 | 22 | + | ZDHHC5 | 11 | - |
| exon-exon | JCHAIN | 4 | + | JCHAIN | 4 | - |
| exon-intron | HNRNPA2B1 | 7 | - | SHB | 9 | - |
| intron-exon | RBFOX2 | 22 | + | APOL1 | 22 | + |
| intron-exon | HK2 | 2 | - | IGHA1 | 14 | - |
| exon-intron | TYROBP | 19 | - | EYA3 | 1 | + |
| exon-exon | ZBTB48 | 1 | + | CA9 | 9 | - |
| exon-exon | EIF4H | 7 | - | EIF4H | 7 | + |
| intron-exon | RNA28SP | 21 | - | ARRDC2 | 19 | - |
| exon-exon | GNA13 | 17 | - | EEF1A1 | 6 | + |
| exon-exon | SUB1 | 5 | - | SUB1 | 5 | + |
| exon-intron | ZNF530 | 19 | - | CRYBG1 | 6 | - |
| exon-exon | CCDC120 | X | - | PPP1R13L | 19 | - |
| exon-intron | NR4A1 | 12 | + | IFRD2 | 3 | - |
| exon-exon | SPHK1 | 17 | - | EP300 | 22 | - |
| intron-exon | LOC105377043 | 3 | - | PLBD1 | 12 | - |
| intron-exon | GUCD1 | 22 | + | HNRNPA1 | 12 | - |
| exon-exon | SNHG29 | 17 | + | TPI1 | 12 | - |
| exon-exon | RAD54B | 8 | + | HNRNPA2B1 | 7 | - |
| intron-exon | GBE1 | 3 | - | MALAT1 | 11 | + |
| exon-exon | YBX1 | 1 | - | YBX1P1 | 14 | - |
| exon-exon | ATP6 | MT | - | PTMA | 2 | + |
| exon-exon | EXOC7 | 17 | - | ALG3 | 3 | + |
| exon-exon | ICAM1 | 19 | - | ABCF3 | 3 | + |
| exon-exon | PITPNB | 22 | + | ARHGDIB | 12 | + |
| exon-exon | JUN | 1 | - | GMPR2 | 14 | + |
| exon-intron | PDZK1IP1 | 1 | + | MTATP6P1 | 1 | + |
| exon-exon | PDXK | 21 | - | RAD9A | 11 | + |
| exon-exon | RPS24 | 10 | + | PAXIP1 | 7 | + |
| intron-exon | HNRNPUL1 | 19 | - | DNAJC14 | 12 | - |
| exon-exon | PBX2P1 | 3 | - | PPIB | 15 | - |
| exon-exon | TNFAIP2 | 14 | - | CD2BP2 | 16 | + |
| exon-exon | NAA10 | X | - | ZDHHC16 | 10 | - |
| exon-exon | EZR | 6 | - | EZR | 6 | + |
| exon-exon | MANBAL | 20 | - | STRN3 | 14 | - |
| exon-intron | AK2 | 1 | + | DLG2 | 11 | + |
| exon-exon | KRT5 | 12 | + | CDK11A | 1 | + |
| exon-exon | HLA-DPB1 | 6 | - | HLA-DPB1 | 6 | + |
| exon-intron | ZNF266 | 19 | - | MECOM | 3 | + |
| exon-exon | COL27A1 | 9 | + | TMSB10 | 2 | + |
| intron-exon | PDE4D | 5 | - | KIAA1217 | 10 | + |
| exon-exon | SGMS1 | 10 | - | TUBGCP2 | 10 | - |
| exon-exon | ATP6 | MT | + | RARA | 17 | - |
| exon-exon | NDRG1 | 8 | - | ATP2A2 | 12 | - |
| exon-exon | GABARAPL2 | 16 | - | ZFAND6 | 15 | + |
| exon-intron | ZNF462 | 9 | - | RIMS2 | 8 | - |
| exon-exon | IDO1 | 8 | + | TM9SF1 | 14 | - |
| intron-exon | LRMDA | 10 | + | HDLBP | 2 | + |
| exon-exon | HIGD1AP1 | 12 | + | DMTN | 8 | + |
| exon-exon | NECTIN1 | 11 | - | SNHG1 | 11 | - |
| exon-exon | AP1G2 | 14 | + | HLA-F | 6 | + |
| exon-intron | EVL | 14 | + | YY1 | 14 | + |
| intron-exon | TRIM26 | 6 | - | UQCRC2 | 16 | + |
| exon-exon | UBAC2 | 13 | + | UBAC2 | 13 | - |
| exon-intron | PSAP | 10 | - | VRK3 | 19 | - |
| exon-intron | ATP8 | MT | + | SLC23A2 | 20 | + |
| intron-exon | FANCA | 16 | - | DHCR24 | 1 | + |
| exon-intron | NEFM | 8 | - | BIVM-ERCC5 | 13 | - |
| exon-intron | HSP90AB1 | 6 | + | HSP90AB1 | 6 | - |
| exon-exon | IMP4 | 2 | + | IMP4 | 2 | - |
| exon-exon | ITM2C | 2 | - | RAP1GAP2 | 17 | - |
| intron-exon | BMP7 | 20 | - | HOOK3 | 8 | + |
| exon-intron | TOR1AIP2 | 1 | + | USP32 | 17 | - |
| exon-exon | CDR1 | X | + | LINC00632 | X | + |
| exon-exon | DNAJC21 | 5 | + | GPSM2 | 1 | + |
| exon-exon | DHRS7B | 17 | - | CIAPIN1 | 16 | - |
| exon-exon | TBPL1 | 6 | + | EDEM3 | 1 | - |
| exon-exon | SCFD2 | 4 | + | KDM3B | 5 | - |
| exon-exon | YWHAE | 17 | + | APRT | 16 | + |
| exon-intron | CLU | 8 | - | MAP2K2 | 19 | - |
| intron-exon | LOC145694 | 15 | - | PAQR5 | 15 | + |
| exon-exon | CLU | 8 | - | MAP2K2 | 19 | - |
| intron-exon | LRRC4C | 11 | + | RPS8 | 1 | - |
| exon-exon | CD2BP2 | 16 | + | RNA45SN2 | 21 | + |
| exon-intron | RNA45SN1 | 21 | - | RNA18SP5 | 21 | + |
| exon-exon | UNC93B1 | 11 | + | MPHOSPH8 | 13 | - |
| exon-intron | PELP1 | 17 | - | RNF220 | 1 | + |
| exon-intron | RNA45SN3 | 21 | - | RNA28SP | 21 | + |
| exon-exon | SLC20A1 | 2 | + | RNA45SN2 | 21 | + |
| intron-exon | RNA28SP | 21 | - | ACTB | 7 | - |
| intron-exon | SRD5A3 | 4 | + | MFSD2A | 1 | + |
| exon-exon | COX1 | MT | - | RAB11A | 15 | + |
| exon-exon | ATP6 | MT | - | SRSF4 | 1 | + |
| exon-intron | CELF3 | 1 | + | TMCO3 | 13 | + |
| exon-exon | ATP6 | MT | - | MRPS14 | 1 | - |
| exon-exon | DROSHA | 5 | + | COX2 | MT | + |
| exon-exon | SURF4 | 9 | - | FTL | 19 | - |
| exon-exon | CCND2 | 12 | - | CREB5 | 7 | - |
| exon-exon | TMED8 | 14 | - | BMPR1A | 10 | + |
| exon-exon | RNA45SN3 | 21 | + | H3-3B | 17 | - |
| exon-exon | PSMD13 | 11 | + | PSMD13 | 11 | - |
| exon-intron | RPS28P7 | 11 | - | RNA28SP | 21 | + |
| intron-exon | ANK3 | 10 | + | USP34 | 2 | + |
| exon-intron | GOLIM4 | 3 | + | HIVEP3 | 1 | + |
| intron-exon | PCDH9 | 13 | - | CCDC91 | 12 | + |
| exon-intron | KCTD3 | 1 | - | GATA2-AS1 | 3 | + |
| exon-intron | LOC283922 | 16 | + | CELF3 | 1 | - |
| exon-exon | WASHC3 | 12 | + | C19orf48 | 19 | - |
| exon-exon | TTC3 | 21 | - | HMGA1 | 6 | + |
| exon-exon | RNA45SN3 | 21 | - | GJA1 | 6 | + |
| exon-intron | YY1 | 14 | + | EPM2A | 6 | + |
| exon-exon | DNAJC17 | 15 | + | RNA45SN1 | 21 | - |
| intron-exon | RBM6 | 3 | - | MAP1B | 5 | - |
| exon-exon | IGSF9B | 11 | + | ARHGEF10L | 1 | + |
| intron-exon | GUSBP2 | 6 | - | MLC1 | 22 | + |
| intron-exon | TLK2 | 17 | + | SC5D | 11 | + |
| exon-intron | MIS18BP1 | 14 | + | PDS5A | 4 | - |
| exon-intron | ATP2A2 | 12 | - | LRRC37A2 | 17 | - |
| exon-exon | SLC25A6 | Y | - | IGFBP5 | 2 | - |
| intron-exon | RNF216P1 | 7 | - | CYTB | MT | + |
| exon-intron | MBP | 18 | + | RPL31 | 2 | + |
| intron-exon | PAPLN | 14 | - | NUMA1 | 11 | - |
| exon-exon | ND5 | MT | + | ND6 | MT | + |
| exon-exon | TRIM22 | 11 | + | CDC27 | 17 | - |
| intron-exon | AK8 | 9 | - | PTPN6 | 12 | + |
| intron-exon | PALD1 | 10 | - | GFAP | 17 | - |
| exon-exon | TBCD | 17 | - | NEAT1 | 11 | - |
| exon-intron | FAAP100 | 17 | + | LENG8-AS1 | 19 | - |
| intron-exon | FOXP1 | 3 | + | RNA45SN1 | 21 | + |
| exon-exon | SLC1A2 | 11 | + | AP4M1 | 7 | - |
| exon-exon | PBXIP1 | 1 | - | MAN2B2 | 4 | + |
| intron-exon | CTTN | 11 | - | CTTN | 11 | + |
| exon-exon | FAM136A | 2 | + | HERC2 | 15 | - |
| intron-exon | NSUN6 | 10 | - | NUP98 | 11 | + |
| exon-exon | RNA45SN3 | 21 | - | MTA2 | 11 | - |
| exon-exon | RNA45SN2 | 21 | - | GLT8D1 | 3 | - |
| exon-intron | TCEANC2 | 1 | - | RBPMS | 8 | + |
| exon-intron | HSPA9 | 5 | + | USP22 | 17 | - |
| exon-exon | RASA3 | 13 | - | GFAP | 17 | - |
| intron-exon | LOC105376387 | 10 | - | TANC1 | 2 | + |
| intron-exon | TIMP3 | 22 | + | PRKDC | 8 | - |
| exon-exon | PABPC1 | 8 | + | PABPC1 | 8 | - |
| exon-intron | COX2 | MT | + | LRRC37A3 | 17 | - |
| exon-exon | SLC23A2 | 20 | + | SLC23A2 | 20 | - |
| exon-intron | ABLIM1 | 10 | - | WBP2 | 17 | - |
| exon-exon | DENR | 12 | + | RAB31 | 18 | + |
| exon-exon | SYNGR3 | 16 | - | RNA45SN2 | 21 | + |
| exon-exon | GFAP | 17 | + | HNRNPH1 | 5 | - |
| intron-exon | FOCAD | 9 | - | PDE9A | 21 | + |
| exon-exon | PPP1R1B | 17 | + | DDR1 | 6 | - |
| exon-intron | SIK3 | 11 | + | GFPT1 | 2 | - |
| exon-exon | MYBBP1A | 17 | - | BAG6 | 6 | - |
| exon-exon | ANKHD1-EIF4EBP3 | 5 | + | ANKHD1-EIF4EBP3 | 5 | - |
| intron-exon | MEGF11 | 15 | + | RPL30 | 8 | - |
| intron-exon | APP | 21 | + | RNA45SN2 | 21 | + |
| exon-intron | GPSM2 | 1 | + | ABAT | 16 | - |
| exon-exon | FN1 | 2 | + | FN1 | 2 | - |
| intron-exon | SH3PXD2B | 5 | - | TTYH3 | 7 | + |
| intron-exon | ANAPC5 | 12 | + | ACYP2 | 2 | - |
| exon-exon | HSPA8 | 11 | + | CFAP126 | 1 | - |
| intron-exon | ARID1A | 1 | + | DHX9 | 1 | + |
| exon-exon | HSPA8 | 11 | + | CFAP126 | 1 | - |
| intron-exon | PDS5B | 13 | - | CRELD1 | 3 | - |
| intron-exon | LOC102723769 | 22 | - | LTBP1 | 2 | - |
| exon-intron | URGCP | 7 | + | LUZP2 | 11 | + |
| exon-exon | BLOC1S5-TXNDC5 | 6 | + | BLOC1S5-TXNDC5 | 6 | - |
| intron-exon | POP5 | 12 | + | VEZF1 | 17 | - |
| exon-intron | PRMT1 | 19 | - | CCDC186 | 10 | - |
| intron-exon | KIAA1755 | 20 | + | BCAP31 | X | + |
| intron-exon | NADSYN1 | 11 | - | HNRNPUL1 | 19 | + |
| exon-intron | CDKN1A | 6 | - | LOC105370090 | 12 | - |
| exon-exon | RAC1 | 7 | - | SNAP91 | 6 | - |
| exon-exon | C1orf61 | 1 | + | ADD3 | 10 | - |
| exon-intron | ORC3 | 6 | - | CTDP1 | 18 | - |
| exon-exon | OSMR | 5 | - | OSMR | 5 | + |
| exon-exon | UPF3A | 13 | - | JAKMIP3 | 10 | - |
| exon-intron | ROM1 | 11 | + | LOC112267968 | 6 | + |
| intron-exon | LOC101930370 | 4 | + | MED20 | 6 | - |
| exon-intron | AKIRIN1 | 1 | - | SORBS1 | 10 | + |
| exon-exon | PEX11B | 1 | + | TPP1 | 11 | + |
| intron-exon | GRAMD2B | 5 | + | GLUL | 1 | - |
| exon-exon | CLU | 8 | + | RPS4X | X | - |
| exon-exon | INF2 | 14 | - | SERPINA3 | 14 | - |
| intron-exon | LRRC23 | 12 | - | LSM10 | 1 | - |
| exon-exon | LOC112268284 | 21 | - | CRYAB | 11 | - |
| exon-intron | THRA | 17 | + | CCNL2 | 1 | - |
| intron-exon | RYR1 | 19 | - | CXXC1 | 18 | - |
| exon-exon | ORAI2 | 7 | - | MCM5 | 22 | - |
| exon-intron | BIN2 | 12 | + | LYN | 8 | + |
| exon-exon | FLNA | X | + | FLNA | X | - |
| exon-exon | LOC112694756 | 16 | - | HLA-A | 6 | + |
| intron-exon | CRYL1 | 13 | - | NDRG2 | 14 | + |
| exon-exon | TRIO | 5 | - | MOV10 | 1 | + |
| exon-exon | UQCRH | 1 | - | UQCRH | 1 | + |
| intron-exon | CHST11 | 12 | - | FARP1 | 13 | + |
| exon-exon | FAM193B | 5 | - | PDE7B | 6 | + |
| exon-exon | EEF1D | 8 | + | C1orf61 | 1 | - |
| exon-intron | ZNF814 | 19 | + | PIK3CD | 1 | - |
| exon-intron | EWSR1 | 22 | + | SPI1 | 11 | + |
| intron-exon | QTRT2 | 3 | - | FLVCR1 | 1 | - |
| intron-exon | TSPAN2 | 1 | - | HNRNPDL | 4 | - |
| exon-intron | CDK5RAP2 | 9 | - | SLC7A8 | 14 | + |
| intron-exon | CSGALNACT1 | 8 | + | IQGAP1 | 15 | + |
| exon-intron | SS18L2 | 3 | + | LOC100133091 | 7 | + |
| exon-intron | CST3 | 20 | + | BRF1 | 14 | + |
| exon-exon | SPTBN1 | 2 | - | ENO1 | 1 | + |
| exon-intron | GOSR1 | 17 | + | STRADA | 17 | - |
| exon-exon | ANKH | 5 | - | GABRE | X | - |
| exon-exon | IFNAR2 | 21 | - | TNK2 | 3 | - |
| exon-exon | LOC100506664 | 7 | - | LOC101928283 | 7 | - |
| exon-exon | TAPBP | 6 | + | TLE5 | 19 | - |
| exon-intron | SMARCB1 | 22 | - | POLG2 | 17 | - |
| exon-intron | L3MBTL2 | 22 | + | VPS13B | 8 | - |
| exon-exon | ANPEP | 15 | + | SRRM2 | 16 | - |
| exon-intron | IL6 | 7 | + | IL6-AS1 | 7 | - |
| exon-intron | MOV10 | 1 | + | SPIDR | 8 | - |
| exon-intron | ITGA10 | 1 | + | NTN1 | 17 | - |
| exon-intron | MUC12 | 7 | + | AL162431.1 | 1 | + |
| exon-intron | CYP4F3 | 19 | + | GPR162 | 12 | + |
| exon-exon | ATP11A | 13 | + | DHX38 | 16 | - |
| exon-intron | SH3PXD2A | 10 | + | PDPK1 | 16 | + |
| exon-exon | HLA-DPB1 | 6 | + | HLA-DPB1 | 6 | - |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| intron-exon | KCNQ5 | 6 | + | PTEN | 10 | + |
| intron-exon | LOC112267956 | 6 | + | ZNF347 | 19 | + |
| intron-exon | CRYZL1 | 21 | + | SECISBP2L | 15 | - |
| exon-exon | SORBS1 | 10 | - | THSD4 | 15 | - |
| intron-exon | AC105052.4 | 7 | + | YIF1B | 19 | - |
| exon-exon | TRAFD1 | 12 | + | TRAFD1 | 12 | - |
| exon-intron | RUSC1-AS1 | 1 | - | TGIF2-RAB5IF | 20 | - |
| exon-intron | ATF4 | 22 | - | NCOA4 | 10 | - |
| exon-intron | RPA2 | 1 | - | ULK1 | 12 | + |
| exon-intron | SPOCK2 | 10 | + | NR4A1 | 12 | - |
| exon-exon | HDLBP | 2 | - | MAVS | 20 | - |
| intron-exon | CACNA1G | 17 | + | CDK18 | 1 | - |
| exon-intron | AARS1 | 16 | + | LHFPL6 | 13 | + |
| exon-intron | COTL1 | 16 | - | RIPOR1 | 16 | + |
| exon-intron | SMO | 7 | - | NPAS3 | 14 | - |
| exon-exon | MCM5 | 22 | + | MCM5 | 22 | - |
| exon-intron | DGLUCY | 14 | + | ITGA7 | 12 | - |
| exon-exon | FMNL3 | 12 | - | TMEM199 | 17 | - |
| exon-exon | HLA-DPB1 | 6 | + | HLA-DPB1 | 6 | - |
| exon-intron | MED28 | 4 | + | TENM1 | X | + |
| exon-intron | APOL3 | 22 | + | PPRC1 | 10 | - |
| exon-exon | LINC-PINT | 7 | - | UHMK1 | 1 | + |
| exon-intron | LOC100190986 | 16 | + | ZNF771 | 16 | - |
| intron-exon | MAML2 | 11 | - | EPHB2 | 1 | + |
| intron-exon | NCKAP5L | 12 | + | GNL1 | 6 | - |
| exon-intron | LIMCH1 | 4 | - | C11orf58 | 11 | + |
| exon-exon | H2AZ2 | 7 | + | ATP6V0A2 | 12 | - |
| intron-exon | PTPRU | 1 | - | ARHGAP21 | 10 | - |
| intron-exon | DLGAP1 | 18 | + | GNL2 | 1 | - |
| exon-exon | ARPC2 | 2 | + | CHDH | 3 | + |
| exon-intron | LOC646517 | 6 | - | CBR4 | 4 | - |
| intron-exon | STIM2 | 4 | - | PPIG | 2 | + |
| exon-exon | ZFP36 | 19 | + | YY1AP1 | 1 | - |
| intron-exon | SIK3 | 11 | + | GPRC5B | 16 | - |
| exon-intron | NCL | 2 | + | EEF1DP3 | 13 | + |
| exon-exon | RNA45SN3 | 21 | + | ILF3 | 19 | + |
| intron-exon | LRIG1 | 3 | - | BGN | X | + |
| exon-exon | SAFB | 19 | + | CALM2 | 2 | - |
| exon-intron | ABLIM1 | 10 | + | FAM160B1 | 10 | + |
| exon-intron | INS-IGF2 | 11 | + | XKR6 | 8 | - |
| exon-exon | HNRNPKP4 | 3 | - | MYOM2 | 8 | + |
| intron-exon | AL121932.2 | 6 | + | PEBP1 | 12 | + |
| exon-exon | TINAGL1 | 1 | - | RNA45SN1 | 21 | + |
| exon-exon | EPS8 | 12 | - | RHEB | 7 | + |
| intron-exon | NIFK-AS1 | 2 | + | CCT6A | 7 | + |
| exon-intron | ECH1 | 19 | + | RNR1 | MT | + |
| intron-exon | PHLPP1 | 18 | + | SF3B4 | 1 | + |
| exon-intron | ANKRD11 | 16 | + | HUWE1 | X | - |
| exon-intron | PTPRS | 19 | + | PDHB | 3 | - |
| exon-exon | YME1L1 | 10 | + | ZNF880 | 19 | - |
| exon-intron | PACC1 | 1 | + | ATF3 | 1 | + |
| exon-exon | GJA1 | 6 | - | GJA1 | 6 | + |
| exon-intron | LRRFIP1 | 2 | + | ARGLU1 | 13 | - |
| exon-exon | PPP1R12B | 1 | - | MAP1LC3B2 | 12 | - |
| exon-exon | LTBP3 | 11 | + | CYHR1 | 8 | + |
| exon-exon | NDRG2 | 14 | + | DDIT4 | 10 | - |
| exon-exon | NOS1 | 12 | + | NFE2L1 | 17 | + |
| exon-exon | LOC729218 | 4 | + | SEPTIN14P4 | 4 | + |
| exon-exon | CLU | 8 | + | CLU | 8 | - |
| intron-exon | SOX2-OT | 3 | + | CCDC12 | 3 | - |
| exon-exon | SPINT2 | 19 | + | ADORA2B | 17 | - |
| exon-exon | TCTN2 | 12 | + | WNK1 | 12 | + |
| intron-exon | KANSL1 | 17 | - | ND4 | MT | - |
| exon-exon | KMT2D | 12 | - | HLA-DPA1 | 6 | - |
| exon-exon | MYCBP2 | 13 | - | VGLL4 | 3 | - |
| exon-intron | RNF213 | 17 | + | SIPA1L2 | 1 | - |
| exon-exon | NPIPB11 | 16 | + | PMS2 | 7 | - |
| exon-intron | NOVA1 | 14 | + | KBTBD8 | 3 | + |
| exon-intron | NAXE | 1 | + | EDA2R | X | - |
| exon-exon | SLC66A2 | 18 | + | SLC66A2 | 18 | - |
| exon-exon | DST | 6 | - | GLB1 | 3 | - |
| exon-exon | MARCKSL1 | 1 | - | MAP1B | 5 | + |
| exon-exon | EPB41L3 | 18 | - | FYB1 | 5 | + |
| exon-exon | ANKS1B | 12 | + | LPIN1 | 2 | - |
| exon-exon | KAT6B | 10 | - | FGFR1 | 8 | - |
| exon-exon | ARSA | 22 | - | ARSA | 22 | + |
| exon-exon | SELENOO | 22 | - | ECE1 | 1 | + |
| exon-exon | SLC40A1 | 2 | - | SLC40A1 | 2 | + |
| intron-exon | CMIP | 16 | + | TPX2 | 20 | + |
| intron-exon | CTNS | 17 | - | RCSD1 | 1 | - |
| intron-exon | LOC107985664 | X | - | NHSL2 | X | + |
| exon-exon | PABPC1 | 8 | + | PABPC1 | 8 | - |
| exon-exon | CYP27A1 | 2 | + | CYP27A1 | 2 | - |
| intron-exon | CLK3 | 15 | + | ZNF777 | 7 | - |
| exon-exon | MOBP | 3 | + | ALDOA | 16 | + |
| exon-intron | UBE2CP5 | 19 | - | USF1 | 1 | + |
| exon-intron | DAZAP1 | 19 | - | DAZAP1 | 19 | + |
| exon-exon | CHD6 | 20 | - | TFIP11 | 22 | - |
| intron-exon | U2AF2 | 19 | + | VPS39 | 15 | - |
| exon-intron | SLC41A3 | 3 | - | RECQL5 | 17 | - |
| intron-exon | LOC100288798 | 12 | - | MEG3 | 14 | + |
| exon-intron | CNP | 17 | - | TMEM63A | 1 | + |
| exon-exon | RAB11FIP5 | 2 | - | JAM2 | 21 | - |
| exon-exon | TAPBPL | 12 | + | GFAP | 17 | - |
| exon-exon | CRTC3 | 15 | + | GIGYF2 | 2 | - |
| exon-exon | AGPAT1 | 6 | + | TUBB4A | 19 | + |
| exon-exon | DDX17 | 22 | - | DSP | 6 | + |
| exon-exon | SPTAN1 | 9 | + | MBD2 | 18 | - |
| exon-exon | MORF4L1P1 | 1 | + | GFAP | 17 | + |
| exon-intron | CLU | 8 | + | MACF1 | 1 | - |
| exon-intron | HLA-DPA1 | 6 | - | QKI | 6 | + |
| exon-exon | MBP | 18 | + | ETNK2 | 1 | - |
| intron-exon | RAB11FIP3 | 16 | + | FN1 | 2 | + |
| intron-exon | GATM | 15 | - | DDX3X | X | + |
| exon-intron | LOC105374301 | 3 | + | AC124944.3 | 3 | - |
| exon-intron | SLC25A26 | 3 | - | RNF220 | 1 | + |
| exon-intron | LOC105374937 | 6 | - | AMBRA1 | 11 | + |
| intron-exon | CCDC125 | 5 | - | CFL1 | 11 | + |
| intron-exon | PAQR6 | 1 | - | PAQR6 | 1 | + |
| exon-exon | LRP1 | 12 | + | CORO2B | 15 | - |
| intron-exon | C2orf48 | 2 | - | KSR1 | 17 | + |
| intron-exon | CIT | 12 | - | FTSJ3 | 17 | - |
| exon-exon | NYAP1 | 7 | - | TXNIP | 1 | - |
| exon-exon | ZNF704 | 8 | - | RNA45SN3 | 21 | + |
| intron-exon | MED13L | 12 | + | MAP1B | 5 | - |
| exon-exon | CERS5 | 12 | + | SLC4A4 | 4 | + |
| intron-exon | SEZ6L | 22 | - | PHF3 | 6 | - |
| exon-intron | ZNF12 | 7 | - | DAGLB | 7 | - |
| exon-intron | PCSK6 | 15 | + | IL3RA | Y | - |
| exon-intron | CLSTN1 | 1 | + | LDLRAD4 | 18 | + |
| exon-exon | REV1 | 2 | - | SIAE | 11 | + |
| exon-exon | TUBGCP3 | 13 | + | GNAS | 20 | - |
| exon-intron | BTBD1 | 15 | + | CAMTA1 | 1 | + |
| exon-intron | CABIN1 | 22 | - | LAMB1 | 7 | - |
| exon-exon | BCAP31 | X | + | BCAP31 | X | - |
| exon-intron | GNAS | 20 | - | SMG6 | 17 | - |
| intron-exon | ME2 | 18 | - | CTNNB1 | 3 | + |
| intron-exon | SLIT1 | 10 | + | RAB10 | 2 | + |
| exon-exon | EGFR | 7 | - | GNPTAB | 12 | - |
| exon-intron | TRIM2 | 4 | + | SGSM3 | 22 | + |
| intron-exon | BCAT2 | 19 | - | MS4A6A | 11 | - |
| exon-exon | SH3GL2 | 9 | - | SH3GL2 | 9 | + |
| exon-exon | EEF1A1P5 | 9 | + | EEF1A1P6 | 7 | + |
| exon-exon | HLA-F | 6 | - | SALL2 | 14 | - |
| intron-exon | MLH3 | 14 | + | GPAA1 | 8 | + |
| exon-intron | TALAM1 | 11 | - | ANKHD1-EIF4EBP3 | 5 | - |
| intron-exon | DDX3P1 | X | + | NUP214 | 9 | - |
| exon-intron | WDR20 | 14 | - | AKT3 | 1 | + |
| exon-intron | VIM | 10 | - | LOC107985890 | 2 | - |
| intron-exon | LAS1L | X | + | SDC3 | 1 | + |
| exon-intron | LOC93622 | 4 | - | LDLRAD4 | 18 | - |
| exon-exon | HOMER1 | 5 | - | EFNB3 | 17 | + |
| exon-intron | MYCBP2 | 13 | - | CDK6-AS1 | 7 | - |
| exon-intron | CALM2 | 2 | + | DSCAM | 21 | + |
| exon-intron | LOC105371058 | 16 | - | LOC107985284 | 19 | - |
| exon-intron | SPDYE3 | 7 | - | ANP32B | 9 | - |
| exon-exon | BRF1 | 14 | + | PART1 | 5 | + |
| exon-exon | CCEPR | 10 | - | R3HDM2 | 12 | - |
| intron-exon | POM121L11P | 22 | - | RNA45SN3 | 21 | - |
| intron-exon | RAPGEF1 | 9 | + | TALAM1 | 11 | - |
| exon-exon | DUS1L | 17 | + | HSD3BP5 | 1 | + |
| intron-exon | ST8SIA6 | 10 | + | TMEM127 | 2 | + |
| exon-intron | CTSB | 8 | + | FAM85A | 8 | + |
| intron-exon | TNFAIP1 | 17 | + | POLDIP2 | 17 | + |
| intron-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| exon-exon | RPH3AL | 17 | + | ESYT2 | 7 | + |
| exon-exon | NHP2 | 5 | + | NHP2 | 5 | - |
| exon-exon | TYRO3 | 15 | - | SEC24C | 10 | + |
| exon-exon | SLC18B1 | 6 | + | SLC18B1 | 6 | - |
| exon-intron | PIM1 | 6 | - | DGCR2 | 22 | + |
| exon-exon | PLEKHJ1 | 19 | + | PDCD6IP | 3 | + |
| exon-intron | UBE2Q1 | 1 | + | PLOD1 | 1 | - |
| exon-intron | PLEKHB1 | 11 | - | LOC105375716 | 8 | + |
| exon-exon | NCAM1 | 11 | - | ND6 | MT | + |
| exon-exon | HNRNPK | 9 | + | COPS5 | 8 | - |
| exon-intron | PAPLN | 14 | + | NUMB | 14 | + |
| exon-intron | RBCK1 | 20 | - | TCTEX1D2 | 3 | - |
| exon-exon | ABHD4 | 14 | - | TSPYL2 | X | + |
| exon-exon | ATP6 | MT | - | ND5 | MT | - |
| intron-exon | SLC5A2 | 16 | + | IGSF8 | 1 | - |
| exon-exon | EFHD1 | 2 | + | OLFM3 | 1 | - |
| exon-exon | AAK1 | 2 | - | PDZRN4 | 12 | + |
| exon-exon | CARNS1 | 11 | - | UBE2L6 | 11 | - |
| exon-intron | SUGP2 | 19 | - | H2BP2 | 1 | - |
| intron-exon | SPDYE2 | 7 | + | SPDYE2B | 7 | + |
| intron-exon | LOC107985046 | 1 | - | RYR3 | 15 | + |
| exon-intron | LINC00632 | X | + | CDR1 | X | + |
| intron-exon | IQCJ-SCHIP1 | 3 | - | CDR1 | X | - |
| exon-intron | NUDT16 | 3 | + | LRRC57 | 15 | - |
| exon-intron | RN7SL3 | 14 | + | LOC105378179 | 14 | + |
| exon-intron | CELSR2 | 1 | - | LOC107985988 | 2 | + |
| intron-exon | TCF20 | 22 | - | TMEM94 | 17 | + |
| exon-exon | GRINA | 8 | + | SELENOW | 19 | + |
| intron-exon | CASTOR3 | 7 | + | RHPN1 | 8 | + |
| intron-exon | TMEM165 | 4 | - | LOC105378179 | 14 | - |
| exon-exon | PTPN18 | 2 | + | MIEF1 | 22 | + |
| exon-intron | TMED4 | 7 | + | GPM6A | 4 | + |
| intron-exon | RILPL1 | 12 | + | TUBB4A | 19 | - |
| exon-intron | MTURN | 7 | - | KAZN | 1 | + |
| exon-exon | PTP4A2 | 1 | - | LLGL1 | 17 | - |
| exon-exon | ISYNA1 | 19 | - | NCDN | 1 | + |
| exon-exon | SERF2-C15ORF63 | 15 | + | TUBB4A | 19 | + |
| intron-exon | NPIPB4 | 16 | - | LOC100190986 | 16 | - |
| intron-exon | GAR1 | 4 | - | BANF1 | 11 | + |
| exon-exon | NHLRC3 | 13 | - | PHIP | 6 | + |
| intron-exon | LDB3 | 10 | - | TUBB4A | 19 | + |
| intron-exon | ARHGAP23 | 17 | - | SEC22C | 3 | + |
| exon-intron | TPI1 | 12 | + | ALKBH3 | 11 | + |
| exon-exon | SEZ6L | 22 | - | SEZ6L | 22 | + |
| exon-intron | IGFBPL1 | 9 | + | FUS | 16 | - |
| exon-exon | ARHGAP17 | 16 | + | NFIC | 19 | - |
| exon-exon | LOC101927506 | 8 | + | RPL23AP53 | 8 | + |
| exon-intron | PRRC2C | 1 | - | KIDINS220 | 2 | - |
| exon-exon | NEFH | 22 | - | IGFBP5 | 2 | - |
| exon-exon | SRRM1 | 1 | - | SRRM1 | 1 | + |
| exon-exon | COL6A1 | 21 | + | COL6A1 | 21 | - |
| intron-exon | AMZ2 | 17 | + | MALAT1 | 11 | - |
| intron-exon | CTTN | 11 | + | MYO5A | 15 | - |
| intron-exon | CECR2 | 22 | - | PCLO | 7 | + |
| exon-exon | SALL1 | 16 | + | PRPF19 | 11 | - |
| exon-intron | FBXO42 | 1 | + | DENND1A | 9 | + |
| exon-exon | RNA45SN1 | 21 | - | RNA45SN3 | 21 | + |
| exon-intron | LOC105378404 | 10 | + | LYNX1-SLURP2 | 8 | - |
| intron-exon | ARR3 | X | - | ND6 | MT | + |
| intron-exon | SENP7 | 3 | + | PCLO | 7 | - |
| exon-intron | ATP6V0A1 | 17 | - | CACNA1B | 9 | + |
| intron-exon | RNA28SP | 21 | - | TERF2IP | 16 | + |
| exon-exon | RNA45SN2 | 21 | - | NCOR2 | 12 | - |
| exon-exon | RNA45SN1 | 21 | - | ENPP2 | 8 | - |
| intron-exon | UBE2Q2P2 | 15 | - | TUBB4A | 19 | - |
| exon-exon | EIF4H | 7 | - | EIF4H | 7 | + |
| exon-exon | BCR | 22 | - | ST20-MTHFS | 15 | + |
| exon-exon | CADM3 | 1 | - | CALM3 | 19 | + |
| exon-intron | TSPYL2 | X | + | NCAM2 | 21 | - |
| exon-exon | TBP | 6 | - | ALG9 | 11 | - |
| intron-exon | LIG1 | 19 | - | TNFRSF25 | 1 | + |
| exon-exon | ACTG1 | 17 | + | IRS1 | 2 | + |
| exon-exon | TOMM20 | 1 | - | RNA45SN1 | 21 | + |
| exon-exon | PCDH7 | 4 | - | RAP1A | 1 | + |
| exon-exon | PPIE | 1 | + | PPIE | 1 | - |
| exon-intron | IPO5 | 13 | + | ADGRB3 | 6 | + |
| exon-intron | ZEB2 | 2 | + | RBFOX1 | 16 | - |
| exon-exon | SYN1 | X | + | SYN1 | X | - |
| exon-exon | LOC107985541 | 22 | - | RFPL1S | 22 | - |
| exon-exon | DSCAM | 21 | + | DSCAM | 21 | - |
| exon-intron | NUDT3 | 6 | + | ANTXR1 | 2 | - |
| exon-exon | MAPK8IP3 | 16 | + | IPO13 | 1 | + |
| exon-exon | KCNH3 | 12 | - | PRPF8 | 17 | - |
| intron-exon | TF | 3 | - | NEAT1 | 11 | + |
| exon-intron | HGSNAT | 8 | - | LINC02256 | 15 | + |
| exon-exon | SORT1 | 1 | - | RNA45SN2 | 21 | + |
| exon-intron | SH3BGRL3 | 1 | - | LINC00342 | 2 | + |
| intron-exon | RAD51B | 14 | + | GAL3ST3 | 11 | - |
| intron-exon | PSMC5 | 17 | + | PER1 | 17 | - |
| exon-intron | RNA45SN2 | 21 | - | RNA28SP | 21 | + |
| intron-exon | KDM4C | 9 | - | RNA45SN1 | 21 | + |
| intron-exon | RNF169 | 11 | + | RNA45SN1 | 21 | + |
| exon-exon | AUNIP | 1 | - | MTFR1L | 1 | - |
| exon-exon | CYTB | MT | - | CYTB | MT | + |
| intron-exon | PARVB | 22 | + | RAD21 | 8 | + |
| exon-intron | LOC105378179 | 14 | + | GAB1 | 4 | - |
| intron-exon | ANK2 | 4 | - | PCDHB14 | 5 | - |
| exon-intron | TESPA1 | 12 | + | NDUFAF2 | 5 | + |
| exon-intron | ENO2 | 12 | - | RNR1 | MT | + |
| exon-exon | CALM1 | 14 | - | CANX | 5 | - |
| exon-intron | PTMS | 12 | - | LOC102724135 | 15 | - |
| intron-exon | LOC106029312 | 7 | + | GTF2IRD2B | 7 | + |
| exon-intron | ARFIP2 | 11 | + | SPOP | 17 | + |
| exon-exon | KPNA3 | 13 | + | BICD1 | 12 | - |
| exon-exon | MDM4 | 1 | + | RBM25 | 14 | - |
| exon-exon | NLGN3 | X | - | TNKS1BP1 | 11 | - |
| exon-exon | DPT | 1 | + | YWHAE | 17 | + |
| exon-exon | ABR | 17 | + | ABR | 17 | - |
| exon-exon | FOSL2 | 2 | + | INTS10 | 8 | + |
| exon-intron | CYB5D2 | 17 | + | ANKFY1 | 17 | + |
| exon-intron | SPARCL1 | 4 | + | PKP4-AS1 | 2 | - |
| exon-exon | ZNF592 | 15 | + | ZNF592 | 15 | - |
| exon-exon | PDE8A | 15 | - | PDE8A | 15 | + |
| exon-intron | DYNC1H1 | 14 | + | RSPH14 | 22 | + |
| intron-exon | ARNT2 | 15 | - | SSBP3 | 1 | - |
| intron-exon | NDUFA9 | 12 | + | AP4M1 | 7 | + |
| exon-exon | LENG8 | 19 | + | LENG8 | 19 | - |
| exon-exon | VTI1A | 10 | + | VTI1A | 10 | - |
| exon-exon | BEGAIN | 14 | - | BEGAIN | 14 | + |
| exon-intron | LOC100132062 | 5 | - | AL732372.2 | 1 | + |
| exon-intron | RNA45SN2 | 21 | - | SCAMP1 | 5 | + |
| exon-exon | LHX2 | 9 | - | NR2F1 | 5 | - |
| intron-exon | ERC2 | 3 | + | NR2F1 | 5 | - |
| intron-exon | LOC101927060 | 17 | - | TTBK1 | 6 | - |
| intron-exon | RNF220 | 1 | + | PTMS | 12 | - |
| exon-intron | PPP2R2B | 5 | - | CTB-99A3.1 | 5 | + |
| intron-exon | ITPR3 | 6 | - | FXR2 | 17 | - |
| exon-exon | AARS1 | 16 | + | GPX3 | 5 | + |
| exon-exon | RNA45SN1 | 21 | - | NISCH | 3 | + |
| exon-intron | VSTM4 | 10 | - | LOC105378298 | 10 | - |
| exon-exon | STX1B | 16 | + | GRIN1 | 9 | + |
| exon-exon | NUDT22 | 11 | - | NUDT22 | 11 | + |
| exon-intron | SORBS3 | 8 | - | SEPTIN4-AS1 | 17 | + |
| exon-exon | VDAC3 | 8 | - | MLEC | 12 | + |
| exon-intron | CHRNB2 | 1 | - | SEC1P | 19 | + |
| exon-intron | SNX17 | 2 | + | FAM171B | 2 | + |
| exon-intron | TMOD1 | 9 | + | AGPAT3 | 21 | + |
| exon-intron | MRPL51 | 12 | - | BCL11B | 14 | + |
| exon-exon | NES | 1 | + | NOS3 | 7 | + |
| exon-intron | SRGAP2D | 1 | + | DNMT3B | 20 | - |
| intron-exon | SHF | 15 | + | RBM47 | 4 | + |
| exon-exon | INTS1 | 7 | + | DGCR6L | 22 | + |
| intron-exon | STK3 | 8 | - | RNA45SN1 | 21 | + |
| intron-exon | CUX1 | 7 | - | ND4 | MT | + |
| exon-intron | ADO | 10 | + | IL1RAPL1 | X | + |
| exon-exon | NRGN | 11 | - | RPL8 | 8 | - |
| exon-exon | GAS7 | 17 | + | RNA45SN3 | 21 | + |
| intron-exon | PPP2R5D | 6 | + | TTBK1 | 6 | + |
| exon-exon | GPM6A | 4 | + | SCLT1 | 4 | - |
| exon-exon | ARHGAP45 | 19 | + | FUS | 16 | + |
| exon-exon | RPS10-NUDT3 | 6 | + | JAG2 | 14 | - |
| exon-exon | IGF2R | 6 | - | PALM2AKAP2 | 9 | + |
| intron-exon | RNA18SP5 | 21 | - | EPAS1 | 2 | + |
| exon-intron | OSBPL2 | 20 | - | GREB1L | 18 | + |
| exon-intron | DHX9 | 1 | - | FARS2 | 6 | - |
| exon-intron | FRMD4A | 10 | - | CACNA1B | 9 | - |
| exon-intron | DYNC1H1 | 14 | + | HDAC4 | 2 | - |
| exon-exon | DCTN1 | 2 | + | RNA45SN3 | 21 | + |
| exon-intron | MEGF8 | 19 | - | DLG2 | 11 | + |
| intron-exon | LINC-PINT | 7 | + | LOC729945 | 16 | + |
| exon-intron | CDK5R2 | 2 | - | CRAMP1 | 16 | + |
| exon-intron | WAC | 10 | + | OXCT1 | 5 | + |
| exon-exon | NHP2 | 5 | + | UBXN6 | 19 | - |
| exon-exon | GFAP | 17 | + | PRKAR1B | 7 | + |
| exon-exon | POU2F1 | 1 | - | POU2F1 | 1 | + |
| exon-intron | MBP | 18 | - | MTATP6P1 | 1 | + |
| exon-exon | SPRY4 | 5 | + | RFX7 | 15 | + |
| exon-exon | SETBP1 | 18 | + | TAOK3 | 12 | + |
| exon-exon | SARS1 | 1 | - | MVD | 16 | + |
| intron-exon | NCAM2 | 21 | - | AFF1 | 4 | + |
| intron-exon | DSE | 6 | + | TSPYL1 | 6 | - |
| intron-exon | KIF1A | 2 | + | IQSEC1 | 3 | - |
| exon-intron | NRGN | 11 | - | FOSL2 | 2 | + |
| exon-intron | NQO2 | 6 | - | NQO2-AS1 | 6 | - |
| exon-intron | S100A8 | 1 | + | ATP11C | X | - |
| exon-exon | DIDO1 | 20 | + | SEC61A1 | 3 | + |
| intron-exon | ROR1 | 1 | - | WDFY3 | 4 | + |
| intron-exon | HNRNPC | 14 | - | DTWD1 | 15 | + |
| exon-intron | MAP4 | 3 | - | C1orf220 | 1 | - |
| intron-exon | DSCAML1 | 11 | - | THTPA | 14 | - |
| intron-exon | KAZN | 1 | + | EVI5L | 19 | + |
| exon-exon | MAP1B | 5 | + | CACNA1C | 12 | - |
| exon-exon | TALAM1 | 11 | - | SUOX | 12 | - |
| exon-intron | NAPB | 20 | + | SNAP25-AS1 | 20 | - |
| intron-exon | FAM155A | 13 | + | ADIPOR1 | 1 | + |
| exon-exon | COX2 | MT | - | COX2 | MT | + |
| intron-exon | LRP1B | 2 | - | ATP1A3 | 19 | + |
| exon-exon | SEZ6L2 | 16 | + | PES1 | 22 | - |
| exon-intron | NSUN5P1 | 7 | - | DANT2 | X | + |
| exon-intron | C9orf131 | 9 | + | ARIH2 | 3 | + |
| exon-intron | ENPP2 | 8 | - | COPG2 | 7 | + |
| exon-exon | MAP4K5 | 14 | + | RTN1 | 14 | + |
| exon-intron | MAP4K2 | 11 | - | PLD3 | 19 | + |
| exon-intron | PPP1R12B | 1 | - | TRIO | 5 | - |
| exon-intron | NAPB | 20 | + | PAXIP1-AS2 | 7 | + |
| intron-exon | ARHGEF1 | 19 | + | R3HDM4 | 19 | - |
| exon-intron | JCAD | 10 | + | DLG2 | 11 | - |
| exon-intron | MIR4697HG | 11 | - | IGSF9B | 11 | - |
| exon-intron | C12orf66 | 12 | - | KSR2 | 12 | + |
| intron-exon | FAM228B | 2 | - | FAM228B | 2 | + |
| intron-exon | PSD2 | 5 | + | NAB1 | 2 | + |
| exon-intron | ENPP2 | 8 | - | COPG2 | 7 | + |
| exon-intron | SLC4A3 | 2 | + | RNR2 | MT | + |
| intron-exon | RNR2 | MT | - | CHN2 | 7 | + |
| exon-exon | STMN2 | 8 | - | FAT1 | 4 | + |
| exon-intron | QDPR | 4 | - | STK40 | 1 | - |
| exon-exon | ARHGEF4 | 2 | + | ECE1 | 1 | + |
| exon-exon | DDN | 12 | - | MLST8 | 16 | - |
| exon-exon | TUBA1B | 12 | + | VPS26B | 11 | - |
| exon-exon | UBAP2L | 1 | + | UBAP2L | 1 | - |
| exon-intron | LOC105378179 | 14 | - | CHCHD3 | 7 | - |
| exon-intron | ADIRF | | + | RALGAPA2 | 20 | + |
| exon-exon | PRKAR1A | 17 | + | RPS17P16 | 22 | + |
| exon-intron | RPS14 | 5 | - | LOC105374553 | | + |
| exon-exon | POM121 | 7 | + | IPO13 | 1 | + |
| exon-exon | FAM104A | 17 | - | COG1 | 17 | - |
| intron-exon | GDAP1L1 | | + | FITM2 | | + |
| exon-exon | TUBA1A | 12 | - | TUBA1B | 12 | - |
| exon-exon | DNAJB2 | 2 | + | NAP1L1 | 12 | - |
| exon-exon | RANBP9 | 6 | - | NOL7 | 6 | - |
| intron-exon | LYPLAL1-AS1 | | - | LOC107984018 | | - |
| exon-exon | EXT2 | 11 | - | NDUFS6 | | + |
| exon-exon | SMN2 | 5 | + | RPL32 | 3 | - |
| exon-intron | HMGB1P6 | 15 | - | THSD4 | 15 | - |
| exon-intron | HDGF | 1 | - | PCDH15 | 10 | - |
| exon-exon | YWHAH | 22 | + | GLIPR2 | 9 | + |
| exon-intron | NIPA2 | | + | WDR88 | 19 | - |
| exon-intron | HLA-A | 6 | + | LOC105373456 | 2 | - |
| exon-intron | PPP2R1A | 19 | + | LOC105373651 | | + |
| exon-intron | LAMB1 | 7 | - | LOC105370000 | 12 | + |
| exon-exon | MCM7 | 7 | + | MCM7 | 7 | - |
| exon-exon | CTSD | 11 | - | SPSB2 | 12 | - |
| exon-exon | SRSF1 | 17 | - | LOC101929185 | | - |
| exon-exon | FTH1 | 11 | - | QDPR | 4 | - |
| exon-intron | FTH1 | 11 | - | SCHLAP1 | 2 | - |
| exon-intron | ZNF738 | 19 | + | ZNF429 | 19 | + |
| exon-exon | FTH1 | 11 | - | NDUFS3 | 11 | + |
| exon-exon | FTH1 | 11 | - | FUS | 16 | + |
| exon-intron | ZNFX1 | 20 | - | MAP1S | 19 | + |
| exon-exon | HLA-B | 6 | - | HLA-C | 6 | - |
| exon-intron | LOC653712 | | - | AC112484.1 | | - |
| exon-intron | VPS26A | 10 | + | SBF2 | 11 | - |
| exon-intron | GNL3L | X | + | VRK1 | | - |
| exon-intron | RPS10P3 | | + | FAM110A | | - |
| exon-exon | ATF7IP | 12 | + | GNPTAB | 12 | - |
| exon-intron | GNG5 | 1 | - | G3BP2 | 4 | + |
| exon-exon | GNB1 | 1 | + | GNB1 | 1 | - |
| exon-intron | RPL10AP6 | 3 | - | PTPRG | 3 | - |
| exon-exon | IGLV2-14 | 22 | + | IGLL5 | 22 | + |
| exon-intron | SNX29P1 | | + | NPIPB3 | 16 | + |
| exon-intron | RPL7A | 9 | + | SMOC1 | 14 | - |
| exon-exon | DDB1 | 11 | + | DDB1 | 11 | - |
| exon-exon | RUNDC3A | 17 | - | RUNDC3A-AS1 | 17 | - |
| exon-intron | EEF1B2 | 2 | + | POLA1 | X | - |
| intron-exon | FAM20A | 17 | + | LINC01482 | | + |
| exon-intron | OLA1 | 2 | - | NDUFA6-DT | 22 | - |
| exon-intron | SCDP1 | | + | CA5BP1-CA5B | X | + |
| exon-exon | C1GALT1 | 7 | + | TP53TG3C | | + |
| exon-intron | C11orf58 | 11 | + | PLEKHA7 | 11 | + |
| exon-intron | SLC1A4 | | + | MARCHF3 | 5 | + |
| exon-exon | RPS27L | 15 | - | CSDE1 | 1 | - |
| exon-intron | ZNF814 | 19 | - | ZNF587 | 19 | - |
| exon-intron | CREB1 | 2 | - | AC007879.5 | 2 | - |
| exon-intron | LOC105372478 | 19 | - | VN2R19P | | - |
| intron-exon | HSD17B12 | | + | CPTP | | - |
| exon-intron | ND4L | MT | + | ND4 | MT | + |
| exon-intron | RPS5 | 19 | + | LOC105372648 | 20 | - |
| exon-intron | RPL13AP25 | 13 | - | MMP24-AS1-EDEM2 | 20 | - |
| exon-exon | ITGAV | 2 | - | ITGAV | 2 | + |
| exon-exon | FANK1 | 10 | - | DHX32 | 10 | - |
| exon-intron | POLG2 | 17 | - | MILR1 | | - |
| exon-exon | ZNF530 | 19 | + | SUSD5 | | + |
| intron-exon | LOC105374963 | | - | UBE2D2 | 5 | + |
| exon-exon | RNF216 | 7 | - | ANKLE1 | 19 | + |
| exon-exon | KPNA4 | 3 | + | KPNA4 | 3 | - |
| exon-intron | GOLGA8B | 15 | - | GOLGA8A | 15 | - |
| exon-intron | RPL21P75 | 7 | + | HSPA4L | | - |
| exon-exon | SH3BGRL3 | 1 | + | BTF3 | 5 | + |
| exon-exon | FST | 5 | - | FST | 5 | + |
| exon-intron | RPS5 | 19 | + | CBFB | 16 | - |
| exon-exon | PRUNE1 | 1 | - | PRUNE1 | 1 | + |
| exon-intron | EI24 | 11 | + | STT3A-AS1 | 11 | - |
| exon-exon | ERGIC1 | 5 | - | ERGIC1 | 5 | + |
| exon-intron | RNA45SN2 | 21 | - | COL4A2 | 13 | - |
| exon-exon | EPS8L1 | 19 | - | TFPT | 19 | + |
| exon-exon | ATF3 | 1 | - | LOC102724687 | 8 | - |
| intron-exon | MRPL23 | 11 | + | CSH2 | 17 | - |
| intron-exon | IER2 | 19 | - | NRP2 | 2 | + |
| exon-intron | CSH2 | 17 | + | PHACTR2 | 6 | + |
| exon-exon | SUPT6H | 17 | - | BGN | X | + |
| exon-intron | CGA | 6 | + | SLC26A5 | 7 | - |
| exon-exon | RBM25 | 14 | - | RBM25 | 14 | + |
| exon-intron | ATP2B4 | 1 | + | LOC101929380 | 5 | - |
| exon-intron | ZNF160 | 19 | - | ZNF521 | 18 | - |
| exon-intron | XAF1 | 17 | - | SLC8A1 | 2 | - |
| exon-intron | ADAT2 | 6 | + | COBLL1 | 2 | - |
| intron-exon | PPP4R1 | 18 | - | PSG1 | 19 | + |
| exon-exon | RHOBTB3 | 5 | + | RHOBTB3 | 5 | - |
| exon-intron | LOC100190986 | 16 | + | NPIPB3 | 16 | + |
| exon-exon | TFPI2 | 7 | - | GLG1 | 16 | - |
| exon-exon | CHD4 | 12 | + | PRELP | 1 | + |
| exon-exon | RNA45SN3 | 21 | + | PSG3 | 19 | - |
| exon-exon | PPT1 | 1 | - | CAP1 | 1 | - |
| exon-intron | ND2 | MT | - | DPH6 | 15 | - |
| exon-intron | CSH2 | 17 | + | ABCB8 | 7 | + |
| exon-intron | NEAT1 | 11 | - | EGFR | 7 | + |
| exon-intron | RACK1 | 5 | - | GSK3B | 3 | - |
| exon-exon | PSG7 | 19 | + | PSG9 | 19 | + |
| exon-exon | PAPPA2 | 1 | - | PAPPA2 | 1 | + |
| intron-exon | MEG3 | 14 | - | GSK3A | 19 | - |
| exon-intron | RAI14 | 5 | - | SLC26A7 | 8 | + |
| exon-exon | HNRNPH1 | 5 | + | PIK3IP1 | 22 | + |
| exon-intron | STARD7 | 2 | + | LAMA2 | 6 | + |
| exon-intron | CYTB | MT | - | LARP1 | 5 | + |
| exon-exon | CAPZB | 1 | - | CAPZB | 1 | + |
| intron-exon | GUSBP16 | 5 | - | MIER1 | 1 | - |
| exon-exon | ZZEF1 | 17 | - | ZZEF1 | 17 | + |
| exon-intron | DLG5 | 10 | + | EIF4A2 | 3 | - |
| exon-exon | RNA45SN3 | 21 | - | RNA45SN2 | 21 | + |
| exon-intron | ZNF703 | 8 | + | RNA28SP | 21 | + |
| intron-exon | PAPPA | 9 | + | DCAF7 | 17 | + |
| exon-exon | GANAB | 11 | + | GANAB | 11 | - |
| exon-exon | CSH2 | 17 | + | CSH1 | 17 | + |
| exon-exon | STEAP4 | 7 | - | CTNND1 | 11 | + |
| exon-intron | GOLGA2 | 9 | + | RNR2 | MT | + |
| exon-intron | LRRC37A16P | 17 | - | MKNK1 | 1 | - |
| exon-exon | GADD45G | 9 | - | WARS1 | 14 | - |
| intron-exon | LOC112268284 | 21 | - | TINAGL1 | 1 | + |
| exon-exon | ADAM12 | 10 | + | ZNF66 | 19 | + |
| exon-intron | SNRNP200 | 2 | + | ABCA1 | 9 | - |
| exon-exon | BPTF | 17 | + | BPTF | 17 | - |
| exon-intron | CSH1 | 17 | + | DYSF | 2 | + |
| exon-exon | HEG1 | 3 | - | HEG1 | 3 | + |
| intron-exon | ASAH1 | 8 | + | CTBP1 | 4 | - |
| intron-exon | ZCCHC17 | 1 | - | KRT8 | 12 | - |
| exon-intron | PPIB | 15 | + | INPP5B | 1 | - |
| exon-intron | ACSS1 | 20 | + | RBM41 | X | - |
| intron-exon | RNF213 | 17 | - | CTSB | 8 | - |
| exon-exon | KRT17 | 17 | + | RPL10 | X | + |
| intron-exon | SSH2 | 17 | + | GOLGA7 | 8 | + |
| exon-exon | GLUL | 1 | - | GLUL | 1 | + |
| exon-exon | NBPF14 | 1 | + | PAPPA | 9 | - |
| exon-exon | ADIPOR1 | 1 | - | APEH | 3 | + |
| exon-intron | PSG9 | 19 | + | CHD6 | 20 | + |
| exon-exon | MYH9 | 22 | + | RAPGEF1 | 9 | + |
| exon-exon | RNA45SN2 | 21 | + | CIR1 | 2 | - |
| intron-exon | CUL1 | 7 | - | TSPAN14 | 10 | - |
| exon-intron | LOC107984338 | 11 | - | PRKCZ | 1 | + |
| exon-exon | FGD5 | 3 | - | FGD5 | 3 | + |
| exon-exon | SRP72 | 4 | + | STRAP | 12 | - |
| exon-intron | LAMP2 | X | - | FNIP2 | 4 | + |
| exon-exon | OGT | X | + | DYNC1I2 | 2 | + |
| intron-exon | RNR1 | MT | + | MALAT1 | 11 | + |
| intron-exon | CPNE4 | 3 | + | PSAT1 | 9 | - |
| intron-exon | RNF43 | 17 | - | GLO1 | 6 | + |
| exon-intron | NEMF | 14 | - | FOXO3 | 6 | + |
| intron-exon | LOC101928626 | 1 | + | BLCAP | 20 | + |
| exon-exon | SETP14 | 3 | - | TCERG1 | 5 | + |
| intron-exon | SCARB2 | 4 | - | CYP19A1 | 15 | - |
| exon-intron | TGM2 | 20 | - | EMC10 | 19 | + |
| exon-intron | BZW1P2 | 3 | - | CLPTM1L | 5 | - |
| exon-exon | OSBP | 11 | + | RPL6P27 | 18 | + |
| intron-exon | MAGI1 | 3 | + | SPRY4 | 5 | - |
| intron-exon | SCIN | 7 | + | CSH1 | 17 | - |
| exon-exon | ARID1A | 1 | - | ARID1A | 1 | + |
| exon-intron | RAB11FIP1 | 8 | + | NF2 | 22 | - |
| intron-exon | ACOX3 | 4 | - | MXD4 | 4 | - |
| exon-intron | SEMA6A | 5 | - | DLG5 | 10 | + |
| exon-intron | ALPP | 2 | + | EVI5 | 1 | + |
| exon-intron | INPPL1 | 11 | - | MIA2 | 14 | + |
| exon-intron | CCDC69 | 5 | - | TASP1 | 20 | - |
| exon-exon | MALAT1 | 11 | + | MAP4K3 | 2 | - |
| intron-exon | TAF15 | 17 | - | RPL4 | 15 | - |
| exon-exon | PSG1 | 19 | - | GABRE | X | + |
| exon-exon | TALAM1 | 11 | - | MALAT1 | 11 | - |
| exon-intron | AHNAK | 11 | - | TPD52 | 8 | + |
| exon-exon | ARHGEF7 | 13 | - | TUSC3 | 8 | + |
| intron-exon | ZNF587B | 19 | - | PHACTR2 | 6 | - |
| intron-exon | BMPR1A | 10 | - | L1TD1 | 1 | + |
| intron-exon | CYP19A1 | 15 | + | RNA45SN2 | 21 | + |
| intron-exon | ACBD7-DCLRE1CP1 | 10 | - | APOLD1 | 12 | - |
| exon-exon | CD46 | 1 | - | NUCB2 | 11 | + |
| intron-exon | ZFP30 | 19 | - | PAPPA | 9 | + |
| exon-intron | COX1 | MT | + | AC007319.1 | 2 | - |
| exon-exon | FBN2 | 5 | + | NIPAL1 | 4 | + |
| exon-exon | ND2 | MT | + | ND2 | MT | - |
| intron-exon | MYO9A | 15 | - | DLK1 | 14 | + |
| intron-exon | VGLL3 | 3 | + | RNA45SN1 | 21 | + |
| exon-exon | RNA45SN1 | 21 | - | ALPP | 2 | + |
| exon-exon | CSH1 | 17 | + | CSH1 | 17 | - |
| exon-exon | PIP4K2B | 17 | - | PIP4K2B | 17 | + |
| exon-intron | AOC1 | 7 | + | COL4A2 | 13 | - |
| exon-exon | CSH2 | 17 | + | RNA45SN1 | 21 | + |
| intron-exon | RNR1 | MT | - | RNA45SN3 | 21 | + |
| exon-intron | NEAT1 | 11 | + | PRKCE | 2 | - |
| exon-exon | EEF1B2 | 2 | + | SOS2 | 14 | - |
| intron-exon | PPARD | 6 | - | LOC105376910 | 1 | - |
| intron-exon | LOC100130701 | 3 | + | FSTL1 | 3 | - |
| exon-exon | TALAM1 | 11 | - | SETDB1 | 1 | - |
| intron-exon | CYP19A1 | 15 | + | SHC1 | 1 | - |
| intron-exon | LAMC3 | 9 | + | RPL22 | 1 | - |
| exon-intron | LCOR | 10 | - | BCAR3 | 1 | - |
| intron-exon | LOC105375567 | 7 | - | AOC1 | 7 | + |
| exon-exon | BOD1L1 | 4 | + | PAPSS1 | 4 | + |
| exon-intron | RSU1 | 10 | + | SCIN | 7 | + |
| exon-intron | KIAA2026 | 9 | - | PAPPA | 9 | - |
| exon-exon | HEG1 | 3 | + | AKAP8L | 19 | - |
| intron-exon | CACNA1C | 12 | - | RHOB | 2 | - |
| exon-intron | AACS | 12 | - | FBN1 | 15 | + |
| intron-exon | RNF19A | 8 | + | ADAM12 | 10 | - |
| exon-intron | PPWD1 | 5 | - | GABRE | X | - |
| intron-exon | ACTN4 | 19 | - | ZSCAN4 | 19 | - |
| exon-intron | PDXDC1 | 16 | - | HS6ST2 | X | - |
| exon-intron | TALAM1 | 11 | - | EHMT1 | 9 | + |
| exon-intron | FER1L4 | 20 | - | ADAM12 | 10 | - |
| exon-intron | KDELR2 | 7 | + | ZHX2 | 8 | + |
| intron-exon | RNF145 | 5 | + | CSH2 | 17 | - |
| exon-intron | ZSCAN4 | 19 | + | ACTN4 | 19 | + |
| exon-exon | KCNG1 | 20 | - | RNA45SN2 | 21 | - |
| exon-exon | PRKCZ | 1 | + | CDC42BPG | 11 | + |
| exon-exon | GH1 | 17 | - | CSH2 | 17 | - |
| intron-exon | HIP1 | 7 | + | LIMCH1 | 4 | - |
| exon-intron | LRPPRC | 2 | + | ADAM12 | 10 | - |
| exon-exon | RNA45SN3 | 21 | - | RNA45SN3 | 21 | + |
| intron-exon | BCL2 | 18 | + | MYH9 | 22 | - |
| exon-exon | MEG3 | 14 | + | MEG3 | 14 | - |
| intron-exon | ADAM12 | 10 | - | FOXO3 | 6 | + |
| exon-intron | F11R | 1 | - | EPN2 | 17 | + |
| exon-exon | TRIM25 | 17 | + | TRIM25 | 17 | - |
| exon-exon | NEK9 | 14 | + | NEK9 | 14 | - |
| exon-exon | GDPD5 | 11 | + | GDPD5 | 11 | - |
| exon-exon | GLMP | 1 | - | RNA45SN1 | 21 | + |
| exon-intron | SLCO5A1 | 8 | - | GTPBP6 | Y | - |
| intron-exon | CAV1 | 7 | + | AKR1B1 | 7 | + |
| exon-exon | EFHD1 | 2 | - | ADAM12 | 10 | - |
| exon-exon | DDB1 | 11 | - | MALAT1 | 11 | + |
| exon-exon | MFSD2A | 1 | + | MFSD2A | 1 | - |
| exon-exon | SYT12 | 11 | - | SH3GLB1 | 1 | - |
| exon-exon | TPPP3 | 16 | - | EZR | 6 | - |
| exon-exon | HMBS | 11 | - | RC3H1 | 1 | + |
| intron-exon | ELMO1 | 7 | - | APOL3 | 22 | - |
| exon-intron | RNA45SN2 | 21 | + | PLEKHH1 | 14 | + |
| exon-exon | CSH2 | 17 | + | PSG1 | 19 | - |
| exon-intron | SVEP1 | 9 | - | LOC115945200 | 2 | + |
| exon-intron | TIE1 | 1 | - | DIP2C | 10 | - |
| intron-exon | AUTS2 | 7 | - | TPPP3 | 16 | - |
| exon-intron | ARID5B | 10 | - | DIS3L2 | 2 | + |
| exon-intron | CHD4 | 12 | + | SPDYE1 | 7 | + |
| exon-exon | ACTR10 | 14 | - | MALAT1 | 11 | + |
| intron-exon | SLC30A7 | 1 | - | LOC105378179 | 14 | - |
| exon-exon | SRSF1 | 17 | - | SRSF1 | 17 | + |
| intron-exon | RYBP | 3 | + | TSPY26P | 20 | + |
| exon-intron | CBR3 | 21 | + | PLA2G5 | 1 | + |
| exon-intron | GCFC2 | 2 | - | CBL | 11 | - |
| intron-exon | POU6F2 | 7 | + | ZNF366 | 5 | + |
| exon-exon | TIMP2 | 17 | - | TIMP2 | 17 | + |
| exon-exon | SLIT2 | 4 | + | SLIT2 | 4 | - |
| intron-exon | TBC1D1 | 4 | + | CD47 | 3 | - |
| exon-exon | KPNA6 | 1 | + | KPNA6 | 1 | - |
| exon-intron | SAT1 | X | - | HUS1 | 7 | - |
| exon-exon | PLGRKT | 9 | + | PLGRKT | 9 | - |
| intron-exon | DPH1 | 17 | - | CDK5RAP3 | 17 | - |
| exon-exon | CSH2 | 17 | + | PPARG | 3 | + |
| exon-exon | CSH2 | 17 | + | GM2A | 5 | + |
| exon-intron | CHD3 | 17 | - | PTPRF | 1 | + |
| exon-exon | ZKSCAN1 | 7 | - | SVEP1 | 9 | + |
| exon-exon | ADAM12 | 10 | + | FLNA | X | - |
| intron-exon | CNST | 1 | - | RNA45SN2 | 21 | + |
| intron-exon | TACC2 | 10 | - | RNA45SN3 | 21 | + |
| exon-intron | HBA2 | 16 | - | NPRL3 | 16 | - |
| intron-exon | BACE2 | 21 | + | PLAC4 | 21 | - |
| intron-exon | LAMB1 | 7 | + | COLEC12 | 18 | + |
| exon-exon | GH2 | 17 | - | CSH2 | 17 | - |
| exon-intron | CSH1 | 17 | + | LOC101929380 | 5 | - |
| exon-intron | PLIN2 | 9 | - | EXOC6 | 10 | + |
| intron-exon | EFHD1 | 2 | - | PSG3 | 19 | - |
| exon-exon | BCAT1 | 12 | + | SLC9A1 | 1 | - |
| exon-exon | ACIN1 | 14 | + | CSAD | 12 | - |
| exon-intron | B4GALT1 | 9 | - | APTX | 9 | - |
| intron-exon | MROH1 | 8 | - | RNA45SN2 | 21 | + |
| exon-intron | PDXDC1 | 16 | - | GMDS | 6 | - |
| intron-exon | ELMO1 | 7 | + | COL4A2 | 13 | + |
| exon-intron | RNA45SN2 | 21 | - | PPTC7 | 12 | - |
| intron-exon | LOC101929380 | 5 | - | NECTIN3 | 3 | + |
| intron-exon | SLCO2B1 | 11 | - | SLC26A2 | 5 | - |
| exon-exon | ATP8 | MT | - | FBXL5 | 4 | - |
| exon-exon | CD59 | 11 | + | RBPJ | 4 | + |
| exon-intron | TFPI2 | 7 | + | LOC105374524 | 4 | + |
| exon-intron | H19 | 11 | - | MRPL23 | 11 | + |
| intron-exon | LSP1P5 | 1 | - | NBPF15 | 1 | - |
| intron-exon | RNA18SP5 | 21 | + | PSG1 | 19 | - |
| intron-exon | MEG8 | 14 | - | CELF1 | 11 | - |
| exon-intron | PLAC4 | 21 | - | SDC1 | 2 | + |
| exon-intron | MYO9B | 19 | - | ADAM12 | 10 | + |
| exon-exon | GRAP | 17 | + | MALAT1 | 11 | + |
| exon-exon | EHMT1 | 9 | - | RNA45SN2 | 21 | - |
| intron-exon | PMF1-BGLAP | 1 | - | PLAC4 | 21 | - |
| exon-intron | TGOLN2 | 2 | - | KYNU | 2 | - |
| intron-exon | LOC107986768 | 7 | - | RNF38 | 9 | - |
| exon-exon | PSG9 | 19 | - | PSG6 | 19 | - |
| exon-exon | PSG4 | 19 | - | PSG2 | 19 | - |
| exon-intron | UBE2Q1 | 1 | + | HSPB8 | 12 | - |
| exon-exon | GDF11 | 12 | + | TPPP3 | 16 | - |
| exon-exon | ATF4 | 22 | - | ARHGEF9 | X | + |
| intron-exon | RNA5-8SP10 | 21 | - | ITIH5 | 10 | - |
| exon-exon | NPIPB12 | 16 | - | NPIPB11 | 16 | - |
| exon-exon | RNA45SN2 | 21 | - | MYH9 | 22 | - |
| exon-intron | MALAT1 | 11 | + | TTC7B | 14 | + |
| exon-intron | CSH2 | 17 | + | SCIN | 7 | + |
| exon-intron | ATF4 | 22 | - | ZFAND3 | 6 | + |
| exon-intron | ACSS1 | 20 | + | RIC1 | 9 | - |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN3 | 21 | - |
| exon-intron | PTGES3 | 12 | + | PTGES3 | 12 | - |
| exon-exon | LAMC1 | 1 | + | WNK1 | 12 | + |
| intron-exon | GUCY1A2 | 11 | + | MALAT1 | 11 | - |
| exon-exon | CHMP4B | 20 | - | CSH2 | 17 | + |
| exon-exon | STX3 | 11 | - | CSH1 | 17 | + |
| intron-exon | BCR | 22 | + | LOC107984916 | 1 | - |
| exon-intron | CSH2 | 17 | + | RAPGEF1 | 9 | - |
| exon-intron | ZKSCAN1 | 7 | + | UTP18 | 17 | + |
| exon-exon | ARF3 | 12 | + | SLC38A7 | 16 | - |
| exon-intron | AGO2 | 8 | + | TENM3 | 4 | - |
| exon-exon | NOTCH2NLC | 1 | - | BRD2 | 6 | + |
| intron-exon | ZNF26 | 12 | + | SRRM2 | 16 | - |
| exon-exon | GIPC1 | 19 | - | ADAM12 | 10 | - |
| exon-intron | RELL1 | 4 | - | SLC43A2 | 17 | - |
| exon-exon | CSHL1 | 17 | + | CSHL1 | 17 | - |
| exon-exon | TALAM1 | 11 | - | MALAT1 | 11 | - |
| exon-exon | C22orf39 | 22 | - | PHF19 | 9 | - |
| intron-exon | ANP32A | 15 | - | HES2 | 1 | - |
| exon-exon | DOK3 | 5 | + | AGAP1 | 2 | - |
| exon-intron | MAVS | 20 | - | GSE1 | 16 | - |
| exon-exon | PRKCSH | 19 | - | KRT19 | 17 | + |
| intron-exon | EIF3M | 11 | - | KRT7 | 12 | - |
| exon-exon | GAB2 | 11 | - | PSG7 | 19 | - |
| exon-exon | SH3D21 | 1 | + | SH3D21 | 1 | - |
| exon-intron | ZNF117 | 7 | - | DOT1L | 19 | + |
| intron-exon | PITPNM2 | 12 | - | TGM2 | 20 | - |
| exon-exon | EWSR1 | 22 | + | MED15 | 22 | + |
| intron-exon | ATF1 | 12 | - | KATNAL2 | 18 | + |
| exon-intron | CSH2 | 17 | + | GH2 | 17 | + |
| exon-exon | GH2 | 17 | - | CSH2 | 17 | - |
| exon-intron | DENND2B | 11 | - | ADPRHL1 | 13 | + |
| intron-exon | NUP214 | 9 | - | INS-IGF2 | 11 | + |
| exon-exon | LOC100133331 | 1 | - | LOC100132287 | 1 | - |
| exon-intron | ATN1 | 12 | - | BRPF3 | 6 | + |
| exon-intron | ADAM12 | 10 | - | ZNF274 | 19 | + |
| intron-exon | MIR29B2CHG | 1 | + | RRBP1 | 20 | - |
| intron-exon | GMDS-DT | 6 | + | PROM1 | 4 | + |
| exon-intron | XRN2 | 20 | + | EEF1D | 8 | + |
| intron-exon | ARHGEF35-AS1 | 7 | + | EP400 | 12 | + |
| exon-exon | RTF2 | 20 | + | INS-IGF2 | 11 | - |
| intron-exon | LOC105369225 | 17 | + | EEF1A1P6 | 7 | - |
| intron-exon | MTMR1 | X | + | ATPAF2 | 17 | - |
| exon-exon | FURIN | 15 | - | FURIN | 15 | + |
| exon-exon | KMT2C | 7 | + | RNA45SN2 | 21 | - |
| intron-exon | GPHN | 14 | + | EGFR | 7 | - |
| exon-intron | NEURL1 | 10 | + | GSE1 | 16 | - |
| intron-exon | PTPRJ | 11 | + | PRKCZ | 1 | + |
| exon-exon | PRRC2C | 1 | + | PHLDA1 | 12 | - |
| exon-exon | NCL | 2 | + | ERICH1 | 8 | + |
| exon-exon | SNRPD3 | 22 | + | CSH2 | 17 | - |
| intron-exon | PAPPA | 9 | - | DOCK1 | 10 | - |
| exon-intron | ADAM12 | 10 | - | RNA18SP5 | 21 | - |
| exon-exon | EGFR | 7 | - | PTPRF | 1 | + |
| exon-intron | LUZP1 | 1 | + | CDYL | 6 | - |
| exon-intron | CDH5 | 16 | - | EML1 | 14 | + |
| exon-exon | SQSTM1 | 5 | + | KMT2C | 7 | + |
| exon-exon | ND5 | MT | - | ND6 | MT | - |
| exon-intron | FBLN1 | 22 | - | MRPL23 | 11 | + |
| exon-exon | SRP68 | 17 | + | LOC107984338 | 11 | - |
| exon-exon | PLEC | 8 | + | SYMPK | 19 | + |
| intron-exon | NPTN | 15 | + | ZSCAN29 | 15 | - |
| exon-exon | BPGM | 7 | - | NAA20 | 20 | + |
| exon-exon | CSF3R | 1 | + | DAB2 | 5 | + |
| intron-exon | MAPK8IP3 | 16 | - | SEPTIN9 | 17 | + |
| exon-exon | PSG1 | 19 | + | PSG4 | 19 | + |
| exon-exon | TBC1D2B | 15 | - | TBC1D2B | 15 | + |
| intron-exon | IGH | 14 | - | IGHA1 | 14 | - |
| intron-exon | STAT6 | 12 | + | INS-IGF2 | 11 | + |
| exon-exon | SETDB1 | 1 | - | ACTG1 | 17 | - |
| exon-exon | PACS1 | 11 | + | PACS1 | 11 | - |
| exon-exon | HLA-B | 6 | - | HLA-C | 6 | - |
| intron-exon | DAPK1 | 9 | + | IMPDH1P5 | 10 | - |
| exon-exon | DAB2 | 5 | + | FCSK | 16 | + |
| intron-exon | MYOF | 10 | - | FBN1 | 15 | - |
| exon-intron | PSG9 | 19 | + | SCAMP2 | 15 | + |
| exon-exon | PKP2 | 12 | + | PSG1 | 19 | - |
| exon-exon | CHD3 | 17 | - | PSG4 | 19 | - |
| exon-exon | KPNA2 | 17 | + | KPNA2 | 17 | - |
| intron-exon | SETD4 | 21 | + | RNA45SN3 | 21 | + |
| intron-exon | TRIO | 5 | - | PHLDB1 | 11 | - |
| exon-exon | PLEKHA6 | 1 | + | PLEKHA6 | 1 | - |
| exon-intron | PSMG2 | 18 | - | PIP4K2A | 10 | - |
| exon-exon | SRSF7 | 2 | + | PECAM1 | 17 | - |
| exon-intron | LOC101929380 | 5 | + | MICU1 | 10 | - |
| exon-exon | RNA45SN1 | 21 | - | CRTC2 | 1 | + |
| exon-exon | PCDH10 | 4 | - | CHMP1A | 16 | - |
| exon-intron | ATP6V1E1 | 22 | + | ANKRD27 | 19 | - |
| exon-exon | LOC112267914 | 10 | - | SEPTIN3 | 22 | + |
| exon-exon | PHF3 | 6 | + | LOC102723728 | 16 | - |
| intron-exon | LOC101927023 | 5 | + | EDC4 | 16 | + |
| exon-intron | MDM4 | 1 | - | MDM4 | 1 | + |
| intron-exon | SLC37A1 | 21 | - | H19 | 11 | - |
| intron-exon | CCNY | 10 | - | CSH1 | 17 | - |
| intron-exon | SHROOM2 | X | - | TOP1 | 20 | + |
| exon-intron | NCL | 2 | + | KIF5B | 10 | - |
| exon-intron | RNA45SN2 | 21 | - | MED13L | 12 | - |
| intron-exon | RORA | 15 | - | PSG4 | 19 | - |
| exon-intron | TRIP12 | 2 | + | LANCL2 | 7 | - |
| exon-intron | CSH2 | 17 | - | ORMDL1 | 2 | - |
| exon-exon | ADAM12 | 10 | + | RTN4 | 2 | - |
| exon-exon | SH3BP2 | 4 | - | SH3BP2 | 4 | + |
| intron-exon | WDR70 | 5 | + | LOC105376126 | 9 | + |
| exon-exon | COLQ | 3 | + | LOC105369352 | 11 | - |
| intron-exon | C3orf52 | 3 | - | HAX1 | 1 | + |
| intron-exon | LOC107986800 | 7 | + | LOC105375292 | 7 | + |
| exon-exon | SREBF1 | 17 | + | MYG1 | 12 | + |
| exon-intron | CSH2 | 17 | + | PI4KAP1 | 22 | - |
| intron-exon | PAPPA | 9 | - | MLLT6 | 17 | + |
| exon-intron | PPIG | 2 | + | ARHGAP12 | 10 | - |
| intron-exon | LINC00882 | 3 | + | GPR1-AS | 2 | + |
| exon-exon | CSH2 | 17 | + | LMNA | 1 | - |
| intron-exon | MICAL3 | 22 | + | CASTOR2 | 7 | - |
| exon-intron | TNFAIP1 | 17 | - | RBM6 | 3 | + |
| exon-exon | SERINC3 | 20 | - | ERVH48-1 | 21 | + |
| exon-exon | CALD1 | 7 | + | ADGRL3 | 4 | + |
| exon-exon | HSPA2 | 14 | - | PSG4 | 19 | + |
| intron-exon | SFSWAP | 12 | - | CYP11A1 | 15 | + |
| exon-exon | TPT1 | 13 | - | RNA45SN2 | 21 | + |
| exon-exon | LOC100653133 | 15 | - | WHAMMP1 | 15 | - |
| exon-exon | MON1B | 16 | - | RPLP0 | 12 | + |
| exon-exon | LAPTM4A | 2 | - | NACC1 | 19 | - |
| intron-exon | RNA28SP | 21 | - | CSH2 | 17 | - |
| exon-exon | ACTR10 | 14 | - | MALAT1 | 11 | + |
| exon-exon | RPS4X | X | - | KANSL1 | 17 | - |
| exon-exon | CSH2 | 17 | + | GFM1 | 3 | + |
| exon-exon | STX4 | 16 | - | CSH1 | 17 | - |
| exon-intron | SBNO2 | 19 | + | MIR503HG | X | - |
| exon-exon | TALAM1 | 11 | - | MALAT1 | 11 | + |
| exon-intron | GABRE | X | + | PTPRM | 18 | - |
| exon-exon | MCPH1 | 8 | + | SSU72 | 1 | + |
| exon-intron | CSH1 | 17 | + | AP2A1 | 19 | - |
| exon-exon | RTN3 | 11 | + | RTN3 | 11 | - |
| intron-exon | ZBTB16 | 11 | + | PAXIP1 | 7 | + |
| exon-exon | DNALI1 | 1 | + | ING4 | 12 | - |
| exon-intron | ST6GALNAC2 | 17 | - | DLG2 | 11 | + |
| exon-intron | PRG2 | 11 | - | SLC22A23 | 6 | + |
| exon-intron | PSG3 | 19 | + | PSG8 | 19 | + |
| intron-exon | LOC112268174 | 16 | + | EGFR | 7 | + |
| exon-exon | ITGA11 | 15 | - | ITGA11 | 15 | + |
| exon-exon | CSH1 | 17 | - | RRBP1 | 20 | - |
| intron-exon | COBLL1 | 2 | + | CSH1 | 17 | + |
| exon-intron | AP1G2 | 14 | - | BMP2K | 4 | + |
| exon-exon | C6orf62 | 6 | - | GRHL1 | 2 | - |
| exon-exon | EEF1A1P5 | 9 | - | PSG3 | 19 | - |
| intron-exon | NIBAN2 | 9 | - | AFF4 | 5 | - |
| exon-intron | RNA45SN1 | 21 | + | JADE3 | X | + |
| exon-intron | SELENOF | 1 | + | FAM53B | 10 | + |
| exon-intron | SREBF2 | 22 | + | PDE8A | 15 | + |
| exon-exon | CDCA8 | 1 | + | ZNF395 | 8 | + |
| exon-exon | GSK3B | 3 | - | NCALD | 8 | - |
| exon-exon | TLN1 | 9 | + | SLCO5A1 | 8 | - |
| exon-intron | CSH2 | 17 | - | RANBP2 | 2 | + |
| exon-exon | PIK3C2B | 1 | + | PINK1 | 1 | + |
| exon-intron | SRRM2 | 16 | + | PIN1 | 19 | + |
| exon-exon | CYTB | MT | - | FN1 | 2 | + |
| exon-intron | PCDH1 | 5 | + | ASMT | X | - |
| intron-exon | MEG3 | 14 | - | PPM1G | 2 | + |
| exon-exon | SWAP70 | 11 | + | TXLNA | 1 | + |
| intron-exon | AL138781.1 | 9 | - | BCR | 22 | - |
| exon-exon | NBAS | 2 | + | PRRC2C | 1 | - |
| exon-exon | RBBP6 | 16 | + | CEP350 | 1 | - |
| exon-exon | PDIA4 | 7 | - | UBR4 | 1 | + |
| exon-exon | TAF7 | 5 | + | TAF7 | 5 | - |
| exon-intron | KIAA0100 | 17 | - | C1QTNF1 | 17 | + |
| exon-exon | OGG1 | 3 | + | LOC107984006 | 9 | + |
| exon-exon | BANP | 16 | - | RHOD | 11 | - |
| exon-exon | STXBP3 | 1 | + | MBD2 | 18 | - |
| intron-exon | IGH | 14 | - | IGHM | 14 | - |
| exon-exon | PSMD4 | 1 | + | ANP32B | 9 | + |
| exon-intron | ACTR2 | 2 | + | CXADR | 21 | - |
| exon-exon | SLC66A2 | 18 | - | KCNG2 | | - |
| exon-exon | RNVU1-19 | | - | GNAS | 20 | + |
| exon-intron | RPL7A | 9 | + | SEMA6D | 15 | - |
| exon-intron | AIP | 11 | + | LINC00385 | | - |
| exon-exon | GALNT1 | 18 | + | RPL36AL | | - |
| exon-intron | VAPB | 20 | + | LOC102724701 | 21 | - |
| intron-exon | SHC4 | 15 | + | EID1 | 15 | + |
| exon-intron | MED10 | 5 | - | LOC108281139 | | + |
| exon-exon | FLNA | X | - | GTF3C6 | 6 | + |
| intron-exon | TIAM2 | 6 | + | MACO1 | 1 | + |
| exon-intron | HIPK3 | | + | RPL10P16 | 19 | - |
| exon-intron | PCLAF | 15 | - | AC087632.2 | | - |
| exon-exon | SET | 9 | + | RPS3 | 11 | + |
| exon-exon | UCHL1 | 4 | + | USP22 | 17 | - |
| exon-exon | NCL | 2 | - | POP5 | | - |
| exon-intron | RPS10-NUDT3 | 6 | - | LOC101928451 | 7 | - |
| exon-exon | TNFRSF14-AS1 | 1 | + | TNFRSF14 | 1 | + |
| intron-exon | LOC105376615 | 11 | - | QSER1 | 11 | + |
| exon-exon | LOC100132154 | 9 | - | CDK5RAP3 | 17 | + |
| exon-intron | RSL1D1 | 16 | - | TXNDC11 | 16 | - |
| exon-exon | NDUFS1 | 2 | - | GCSHP3 | 2 | - |
| exon-intron | ARPC3 | 12 | - | AC144548.1 | 12 | - |
| exon-intron | PTRH1 | 9 | - | ADARB1 | 21 | - |
| exon-exon | ANP32BP1 | 15 | + | ANP32B | 9 | + |
| exon-intron | SEM1 | 7 | - | RCC2 | 1 | + |
| exon-exon | ANP32B | 9 | - | ANP32B | 9 | + |
| exon-exon | KPNB1 | 17 | - | RPL11 | 1 | + |
| exon-intron | MRRF | 9 | + | DIAPH3 | 13 | + |
| exon-intron | COX4I1 | 16 | + | TMEM35A | X | - |
| exon-intron | EIF3I | 1 | + | PPP1R36 | 14 | + |
| exon-intron | PARL | 3 | - | LRP12 | 8 | + |
| exon-intron | TRIR | 19 | - | LOC105370969 | 15 | - |
| exon-intron | LCP1 | 13 | - | OBI1 | 13 | + |
| exon-intron | RACK1 | 5 | - | LOC105376755 | 2 | + |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-exon | MKRN1 | 7 | - | PTTG1 | 5 | + |
| intron-exon | LINC01029 | 18 | - | LOC105372218 | 18 | - |
| exon-intron | SDCBP | 8 | + | MME | 3 | - |
| intron-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-intron | RPS2 | 16 | - | HEG1 | 3 | + |
| exon-exon | NUDT22 | 11 | - | TRPT1 | 11 | - |
| exon-exon | H3-3B | 17 | - | H3-3A | 1 | + |
| exon-intron | CHCHD3 | 7 | - | EXOC4 | 7 | - |
| exon-exon | RPL6 | 12 | + | RPL6 | 12 | - |
| exon-exon | EXOC7 | 17 | - | LSM3 | 3 | + |
| exon-intron | NACA | 12 | - | ATP8B1 | 18 | + |
| exon-exon | RHBDF1 | 16 | + | RHBDF1 | 16 | - |
| exon-exon | RALY | 20 | + | EIF1 | 17 | + |
| exon-exon | IAH1 | 2 | + | ADAM17 | 2 | - |
| exon-intron | CYCS | 7 | - | CNTNAP2-AS1 | | - |
| exon-exon | MAVS | 20 | + | UBE3A | | + |
| exon-exon | ENO1 | 1 | + | ENO1 | 1 | - |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-exon | ZBED4 | 22 | + | HMGB1 | 13 | - |
| exon-exon | WAC-AS1 | | - | RPL7L1 | 6 | + |
| exon-intron | LINC01082 | | - | AC135012.3 | | - |
| exon-exon | KDELR2 | 7 | + | KDELR2 | 7 | - |
| intron-exon | LOC101928383 | 4 | + | SCRG1 | 4 | + |
| exon-exon | PCAT4 | 4 | - | SPTAN1 | 9 | - |
| exon-exon | MTPN | 7 | + | LUZP6 | 7 | + |
| exon-exon | ANXA2P2 | 9 | - | GUK1 | 1 | + |
| intron-exon | UBAC2 | 13 | + | RPL17P7 | 1 | + |
| intron-exon | SLC48A1 | 12 | + | HDAC7 | 12 | + |
| intron-exon | LOC107984839 | 16 | + | RNPS1 | 16 | + |
| exon-intron | CHAC1 | 15 | - | LETM1 | 4 | + |
| exon-exon | OTUB1 | 11 | - | NKTR | 3 | + |
| exon-exon | LOC105372656 | 20 | + | VPS33A | 12 | + |
| exon-intron | PUM1 | 1 | - | IGL | 22 | + |
| intron-exon | RNA18SP5 | 21 | + | U2AF2 | 19 | + |
| intron-exon | IGL | 22 | + | IGLC2 | 22 | - |
| exon-exon | PTPRN2 | 7 | + | LOC107985770 | 2 | - |
| exon-intron | HMGA1 | 6 | + | RBKS | 2 | - |
| exon-intron | DOLK | | - | CROT | | + |
| exon-intron | HIPK4 | 19 | - | PLD3 | 19 | - |
| exon-intron | ASF1B | | - | MED13L | 12 | + |
| exon-exon | ZNF609 | 15 | - | ZNF609 | 15 | + |
| exon-exon | SERBP1P5 | 4 | - | SERBP1 | 1 | - |
| exon-intron | UBB | 17 | + | CBWD3 | 9 | + |
| exon-exon | CNN1 | 19 | + | DYNLRB1 | 20 | + |
| exon-intron | PPP3CB | 10 | - | NPTN | 15 | + |
| exon-intron | RAN | 12 | + | AC104435.2 | | - |
| exon-exon | CSNK1A1 | 5 | - | FOXD1 | 5 | - |
| exon-intron | MYG1 | 12 | + | USP9YP36 | | + |
| exon-exon | RCC1 | 1 | + | AIFM1 | X | - |
| exon-intron | PPP2CB | 8 | - | PAK5 | 20 | + |
| exon-intron | RPL13 | 16 | + | SASH1 | 6 | + |
| exon-exon | ATP1A1 | 1 | + | RPS27AP5 | | + |
| exon-exon | FUS | 16 | + | FTH1 | 11 | - |
| exon-intron | CALM1 | 14 | + | ZNF835 | | - |
| exon-exon | PPM1G | 2 | - | MYL12B | 18 | + |
| exon-exon | ATXN7L3B | 12 | + | RPS13 | 11 | - |
| exon-exon | PUS10 | 2 | - | RPS12P3 | 2 | - |
| exon-intron | PCBP1 | 2 | + | PCCB | 3 | - |
| exon-intron | PTMAP9 | 12 | + | AC136431.1 | 16 | + |
| exon-exon | AHNAK | 11 | - | FAU | 11 | - |
| exon-exon | TMEM245 | 9 | + | TMEM245 | 9 | - |
| exon-exon | ZFAND1 | 8 | + | ZFAND1 | 8 | - |
| exon-exon | RFX5 | | - | RPS15 | | + |
| exon-intron | RBM8A | 1 | - | NFIC | 19 | + |
| exon-intron | GNPNAT1 | 14 | - | ERO1A | 14 | - |
| exon-exon | EEF1A1P5 | 9 | + | IFT74 | 9 | + |
| intron-exon | LOXL1 | 15 | + | KARS1 | 16 | - |
| exon-exon | OXSR1 | 3 | + | DAXX | 6 | - |
| exon-exon | RPS23 | 5 | + | RPS23P8 | X | + |
| exon-intron | UBE2N | 12 | - | GALNT17 | 7 | - |
| exon-intron | FAM168B | 2 | - | ADA2 | 22 | - |
| exon-intron | RPL37 | 5 | - | CTNND1 | 11 | + |
| exon-intron | RPL29 | 3 | - | ZNF569 | 19 | + |
| exon-intron | RPS10P15 | | - | LOC101928451 | 7 | - |
| exon-intron | PFAS | 17 | + | MTA3 | 2 | - |
| exon-intron | SNRPG | 2 | - | RANBP2 | 2 | + |
| exon-intron | ND4L | MT | + | ND4 | MT | + |
| exon-intron | RPL3 | 22 | + | RPL3P4 | 14 | - |
| exon-intron | RANBP3 | 19 | - | ZFHX4 | | - |
| exon-exon | POLR2C | | + | MLEC | 12 | + |
| exon-exon | CFL1 | 11 | - | FTH1 | 11 | - |
| exon-exon | MARCKS | 6 | - | MARCKS | 6 | + |
| exon-intron | TK1 | 17 | + | CAMTA1 | 1 | + |
| exon-exon | CUL3 | 2 | + | CUL3 | 2 | - |
| exon-intron | HIVEP3 | 1 | - | LOC105371466 | | - |
| exon-exon | CHCHD6 | 3 | - | CHCHD6 | 3 | + |
| exon-intron | PRR11 | 17 | + | YPEL2 | 17 | + |
| exon-exon | FLII | 17 | + | FLII | 17 | - |
| exon-exon | SRP68 | 17 | + | SRP68 | 17 | - |
| exon-exon | HDGF | 1 | - | RPL10P16 | 19 | - |
| exon-exon | LDHA | 11 | - | LDHA | 11 | + |
| exon-exon | CDCP1 | 3 | - | ACTN4 | 19 | + |
| intron-exon | AC010457.1 | | - | LOC105374732 | | - |
| exon-intron | PTGES3 | 12 | - | CLCN3P1 | 9 | + |
| exon-intron | PRDX6 | 1 | + | SMARCB1 | 22 | + |
| exon-exon | COASY | 17 | - | COASY | 17 | + |
| exon-intron | MYL6 | 12 | + | LOC105376147 | | - |
| exon-exon | EIF3CL | 16 | + | EIF3C | 16 | + |
| exon-intron | SLAIN1 | | + | PALLD | 4 | + |
| exon-intron | TXNL4B | 16 | - | OIP5-AS1 | 15 | - |
| exon-exon | ZDHHC17 | 12 | - | ZDHHC17 | 12 | + |
| exon-intron | FTH1 | 11 | - | SCHLAP1 | 2 | - |
| exon-exon | TMUB1 | 7 | - | HOXC8 | 12 | + |
| exon-intron | TRIM27 | 6 | - | SMARCB1 | 22 | - |
| exon-intron | DDX49 | 19 | + | ATF1 | 12 | - |
| exon-intron | KLF16 | | - | ARHGAP5 | | - |
| exon-exon | PRPF8 | 17 | - | LDHA | 11 | + |
| exon-exon | C1QBP | 17 | + | C1QBP | 17 | - |
| exon-exon | IFNAR1 | 21 | + | SF3A3 | 1 | - |
| exon-exon | NPM1 | 5 | - | MED28 | 4 | + |
| exon-exon | RPL7L1 | 6 | - | RPL7L1 | 6 | + |
| intron-exon | LOC112268259 | 1 | - | ZNF731P | 1 | - |
| exon-exon | SLC35D3 | 6 | - | SLC35D3 | 6 | + |
| exon-intron | HERPUD2 | 7 | - | RASA4DP | 7 | + |
| exon-intron | CNBP | 3 | + | CSNK2A1 | 20 | + |
| exon-intron | SINHCAF | 12 | + | ARL6IP6 | 2 | - |
| intron-exon | CENPV | 17 | - | ATXN7 | 3 | - |
| exon-intron | ALDH1L2 | 12 | + | DPPA4 | 3 | + |
| exon-exon | GPATCH2L | 14 | - | MAT2A | 2 | - |
| intron-exon | TXNRD1 | 12 | + | TMSB10 | 2 | + |
| exon-exon | H3P6 | 2 | + | RPL10P9 | 5 | - |
| exon-exon | PRKX | X | + | RBFOX2 | 22 | - |
| exon-intron | DSP | 6 | + | TRIM16 | 17 | - |
| exon-exon | KRT19 | 17 | - | EXOSC10 | 1 | - |
| intron-exon | JPH3 | 16 | + | KLHDC4 | 16 | + |
| exon-intron | ACACA | 17 | - | LOC730100 | 2 | + |
| exon-intron | CD74 | 5 | - | RBL1 | 20 | - |
| exon-exon | MGMT | 10 | - | MGMT | 10 | + |
| exon-exon | FN1 | 2 | + | FN1 | 2 | - |
| exon-intron | TUBA1B | 12 | + | RNR1 | MT | + |
| exon-exon | SF3B2 | 11 | + | PTMA | 2 | + |
| exon-exon | ERBIN | 5 | + | SOD2 | 6 | - |
| exon-exon | TMF1 | 3 | + | TMF1 | 3 | - |
| exon-exon | PAX8 | 2 | + | PAX8 | 2 | - |
| intron-exon | ARMC2 | 6 | + | SESN1 | 6 | - |
| exon-exon | FN1 | 2 | - | TPM4 | 19 | + |
| exon-exon | VPS13C | 15 | - | EPN1 | 19 | + |
| exon-exon | GPR15 | | - | RPL38P4 | 3 | - |
| exon-exon | MTDH | 8 | - | MTDH | 8 | + |
| exon-exon | ATAD3B | 1 | + | ATAD3A | 1 | + |
| exon-exon | CCDC90B | 11 | + | CCDC90B | 11 | - |
| exon-exon | POLD2 | 7 | + | POLD2 | | - |
| exon-intron | WNK1 | 12 | + | NBEAP3 | 22 | + |
| exon-intron | TFE3 | X | - | LOC105370861 | | - |
| intron-exon | AC067930.4 | 8 | + | NAPRT | 8 | + |
| exon-exon | CANX | 5 | + | YBX3 | 12 | - |
| exon-intron | ADH5 | 4 | - | RAB11B-AS1 | | - |
| exon-exon | LOC642975 | | - | TMEM230 | 20 | - |
| exon-exon | ZNF106 | 15 | + | ZNF106 | 15 | - |
| exon-intron | DEGS1 | 1 | + | CHADL | 22 | + |
| exon-intron | LOC105370064 | | - | BPTF | 17 | - |
| exon-exon | PRPS1 | X | + | PTMA | 2 | + |
| exon-intron | RPL7AP6 | 14 | - | SMOC1 | 14 | - |
| exon-intron | HMGB1P6 | 15 | - | THSD4 | 15 | - |
| intron-exon | MARK3 | 14 | + | CYCS | 7 | - |
| exon-intron | RPS8 | 1 | + | SUMO1 | | - |
| exon-intron | VAPA | 18 | + | TINCR | 19 | + |
| exon-exon | SPP1 | 4 | - | MALAT1 | 11 | + |
| exon-exon | CWC27 | 5 | - | CWC27 | 5 | + |
| exon-exon | CHRAC1 | 8 | + | ZSWIM9 | 19 | + |
| exon-intron | LOC644135 | | - | PDE7B | 6 | - |
| exon-exon | PLCH1 | 3 | - | GNAS | 20 | + |
| exon-intron | RPL35 | 9 | - | PCDH11Y | | - |
| exon-exon | LPP | 3 | - | LPP | 3 | + |
| exon-intron | RPS3 | 11 | + | MACROD2 | 20 | + |
| intron-exon | MTATP6P1 | 1 | + | COX3 | MT | + |
| exon-intron | RPA3 | 7 | - | PNPLA8 | 7 | + |
| exon-exon | CBFB | 16 | - | CBFB | 16 | + |
| exon-intron | MAGEA3 | X | + | CSAG4 | X | + |
| exon-exon | ARMC6 | 19 | + | CHCHD2P6 | 1 | + |
| exon-intron | GLMP | 1 | - | RABGEF1 | 7 | - |
| exon-intron | LAMTOR4 | 7 | + | GNAL | 18 | + |
| exon-exon | DCAF8 | 1 | + | DCAF8 | 1 | - |
| exon-exon | ABL2 | 1 | + | ABL2 | 1 | - |
| exon-exon | RAD21 | 8 | + | RAD21 | 8 | - |
| exon-intron | SERINC1 | 6 | - | HSF2 | | - |
| exon-exon | LRP5 | 11 | - | LRP5 | 11 | + |
| exon-exon | SFT2D1 | 6 | - | GMFB | 14 | - |
| exon-exon | SLC25A6 | Y | + | SLC25A6 | X | - |
| intron-exon | ADK | 10 | + | ATP8 | MT | + |
| exon-exon | ATP5F1B | 12 | + | ATP5F1B | 12 | - |
| exon-intron | CTNNA1 | 5 | + | SIL1 | 5 | + |
| exon-intron | CBX3 | 7 | + | TRAPPC10 | 21 | - |
| exon-exon | USP14 | 18 | + | CREG2 | 2 | - |
| exon-exon | IL13RA1 | X | + | ND2 | MT | + |
| exon-intron | GALNT6 | 12 | - | AKAP6 | | - |
| exon-exon | LYAR | 4 | + | LYAR | 4 | - |
| exon-exon | LHFPL2 | 5 | - | RPL9P8 | 15 | - |
| exon-intron | PVT1 | 8 | + | KB-1568E2.1 | 8 | - |
| exon-exon | LDHA | 11 | + | MEST | 7 | + |
| exon-intron | RPS20 | 8 | - | EGFEM1P | | - |
| exon-intron | OPA1 | | + | ACTBP11 | | - |
| exon-intron | PARK7 | | + | MYO1E | 15 | - |
| exon-intron | FRMD3 | | - | NPIPB5 | 16 | + |
| intron-exon | RAB3GAP2 | 1 | + | MORF4L1P1 | 1 | + |
| exon-exon | RPS5 | 19 | - | RPS5 | 19 | + |
| exon-exon | TRMT61A | 14 | - | TRMT61A | 14 | + |
| exon-exon | SYNJ2 | 6 | + | DNAJC7 | 17 | - |
| exon-intron | COLGALT1 | 19 | + | MTHFD1 | 14 | - |
| exon-intron | RHOA | 3 | - | AC009435.1 | | - |
| exon-exon | SMAGP | 12 | - | TFCP2 | 12 | - |
| exon-exon | HMGN1 | 21 | + | HMGN1 | 21 | - |
| exon-exon | TOPORS | 9 | - | DDX58 | 9 | - |
| exon-intron | TTC37 | 5 | - | RPL30 | 8 | - |
| exon-intron | ATXN3 | 14 | - | TRIP11 | | - |
| exon-intron | LY75-CD302 | | - | DPP6 | 7 | + |
| exon-exon | ELF1 | 13 | - | CCT2 | 12 | + |
| exon-exon | XIAP | | + | XIAP | X | - |
| exon-exon | NBPF8 | 1 | + | EFNB1 | X | + |
| exon-intron | SNRPF | 12 | + | SPON1 | 11 | - |
| intron-exon | LOC105379109 | 5 | - | LOC105379111 | | - |
| intron-exon | AC093689.1 | | + | LOC107986271 | | + |
| intron-exon | AC016710.1 | | - | LOC105373645 | | - |
| exon-intron | AXDND1 | | - | SOAT1 | 1 | - |
| intron-exon | RSPH3 | | + | LOC105378083 | | + |
| intron-exon | AC079052.1 | | + | LOC105372083 | | + |
| exon-exon | LOC112267895 | | + | LINC02187 | | + |
| intron-exon | AL713998.3 | | + | LOC105377844 | 6 | + |
| intron-exon | AC093765.4 | | + | LOC107986306 | | + |
| exon-exon | ACTR3 | 2 | + | LINC01191 | | + |
| exon-intron | LOC102724875 | | + | RGPD6 | 2 | + |
| exon-exon | LOC105371446 | | + | ND5 | MT | - |
| exon-intron | SMYD3 | 1 | + | LOC105373269 | 1 | + |
| intron-exon | LOC105370302 | | + | MIR4500HG | | + |
| exon-intron | CALHM6 | 6 | - | Z84488.1 | | - |
| intron-exon | SOSTDC1 | | + | LRRC72 | | + |
| intron-exon | AL451048.1 | | + | SPANXB1 | | + |
| exon-intron | FNBP4 | 11 | - | AL158064.1 | | - |
| intron-exon | LOC102723656 | | + | PSPHP1 | | + |
| exon-exon | LERFS | | - | MYO5BP2 | | - |
| intron-exon | RP11-92F20.1 | | + | CUL3 | 2 | + |
| intron-exon | EPHB2 | 1 | - | LINC01184 | 5 | - |
| exon-intron | LOC105374137 | 3 | - | AC018450.1 | 3 | - |
| exon-intron | MAGEB17 | | - | AC078993.1 | X | - |
| exon-intron | OR6C68 | | - | AC122685.1 | 12 | - |
| intron-exon | LOC107986956 | 8 | - | LINC00535 | 8 | - |
| exon-intron | LOC105373645 | | + | AC016710.1 | | + |
| intron-exon | DPY19L1P2 | | - | DPY19L1P1 | 7 | + |
| exon-intron | LOC105374060 | | - | RP11-384F7.1 | | - |
| intron-exon | LOC339666 | 22 | - | RFPL3S | | - |
| intron-exon | CAND2 | | + | LOC105376956 | | + |
| exon-intron | LOC105374060 | | - | RP11-384F7.1 | | - |
| exon-intron | SUN1 | 7 | - | AK2 | 1 | + |
| exon-intron | DLD | 7 | + | LAMB1 | 7 | + |
| exon-intron | ENOX1 | | - | MTUS2 | 13 | - |
| intron-exon | PTPN9 | 15 | - | BUB3 | 10 | + |
| intron-exon | AL009181.1 | | - | OPRD1 | | - |
| intron-exon | GZMAP1 | | + | GZMA | | + |
| exon-intron | ENOX1 | | - | MTUS2 | 13 | - |
| intron-exon | LUZP2 | 11 | - | RBMS3 | 3 | + |
| intron-exon | LOC105369843 | | + | KCNC2 | 12 | + |
| exon-intron | LINC01504 | | + | FAM172A | 5 | - |
| intron-exon | ARMH4 | | + | ACTR10 | 14 | + |
| intron-exon | AC073517.1 | 7 | - | LOC100630923 | 7 | - |
| exon-intron | SPIN4 | | + | LINC01278 | X | + |
| intron-exon | CWC22 | 2 | - | THBS1 | 15 | - |
| intron-exon | RYR3 | 15 | - | LDHA | 11 | + |
| intron-exon | GZMAP1 | | + | GZMA | | + |
| exon-intron | STAP1 | | + | UBA6 | 4 | + |
| exon-exon | SCRN3 | | + | LOC105373748 | | + |
| exon-intron | LINC02442 | | - | LINC02408 | | - |
| intron-exon | LOC101927609 | 7 | + | AHR | 7 | + |
| exon-intron | LOC107985831 | | - | UBE2E3 | 2 | - |
| exon-exon | CCDC88C | 14 | - | MXRA7 | 17 | - |
| exon-exon | N4BP2L2 | 13 | - | N4BP2L1 | 13 | - |
| exon-exon | RNGTT | 6 | - | OR7E47P | 12 | + |
| intron-exon | MOCOS | 18 | - | LOC101927809 | 18 | - |
| intron-exon | TMTC4 | 13 | + | BIRC6 | 2 | + |
| exon-intron | APLF | 2 | + | LOC105374191 | 3 | - |
| exon-intron | LOC107986135 | | - | PPP2R3A | | - |
| intron-exon | FP236383.3 | 21 | - | CD44 | 11 | + |
| exon-intron | LOC105379364 | 8 | + | AF279873.3 | 8 | + |
| exon-intron | LOC101929251 | 2 | - | AC018467.1 | | - |
| exon-exon | LOC101927636 | 4 | + | LOC105377459 | 4 | + |
| exon-intron | OR4F16 | | - | LOC101928626 | 1 | - |
| exon-intron | LOC101927263 | | + | AC087477.2 | | + |
| exon-exon | RFK | 9 | + | RPSAP9 | | + |
| exon-exon | IQCG | 3 | - | LRCH3 | 3 | - |
| exon-intron | WDFY1 | 2 | - | AC093884.1 | 2 | - |
| intron-exon | LOC101926944 | | + | FGGY | 1 | + |
| exon-intron | LIVAR | | - | LINC01909 | | - |
| exon-intron | LINC01324 | | - | LOC105374191 | 3 | - |
| exon-intron | LOC105375826 | | + | AC022568.1 | | + |
| exon-intron | MRPL1 | | + | TTTY18 | | - |
| exon-exon | KLRC2 | | + | KLRC1 | 12 | + |
| intron-exon | SLC35F3 | 1 | + | KXD1 | 19 | - |
| exon-exon | FLOT2 | 17 | - | KLF7 | 2 | + |
| intron-exon | OCIAD1-AS1 | 4 | - | OCIAD1 | 4 | - |
| exon-exon | PSMD2 | 3 | - | SLC13A2 | | - |
| exon-intron | RHCE | 1 | - | TMEM50A | 1 | - |
| intron-exon | LOC105378808 | | - | PIGK | 1 | - |
| exon-intron | ENOX1 | | - | MTUS2 | 13 | - |
| intron-exon | AC073316.1 | | + | LOC100129603 | | + |
| exon-exon | NPIPB7 | | - | NPIPB6 | | - |
| exon-intron | CFAP20DC | 3 | + | CFAP20DC-AS1 | 3 | + |
| intron-exon | AC105914.2 | | - | ADAM29 | 4 | - |
| intron-exon | AL033379.1 | | + | GPR63 | | + |
| exon-intron | TUBB8P6 | | + | PLD5 | 1 | + |
| intron-exon | TOPBP1 | 3 | - | VWA7 | 6 | + |
| intron-exon | LOC101927787 | | + | LOC105373209 | | + |
| exon-intron | PPA2 | 4 | - | TET2-AS1 | 4 | - |
| exon-exon | LINC00844 | | + | LOC102724768 | | + |
| exon-intron | DCPS | 11 | + | ADAP2 | 17 | - |
| intron-exon | CCDC91 | 12 | + | LOC101928705 | 12 | + |
| intron-exon | NGB | | + | POMT2 | 14 | + |
| intron-exon | GRM7-AS3 | | - | COL1A2-AS1 | | - |
| exon-exon | LOC107987293 | | - | LOC105379508 | | - |
| exon-intron | LOC105377459 | | + | LOC107986317 | | + |
| intron-exon | AL158834.2 | | + | EPC1 | 10 | + |
| intron-exon | AC022973.5 | | + | CYRIB | 8 | + |
| exon-intron | LOC100996723 | 1 | + | AC245297.3 | 1 | - |
| exon-exon | ACTR3 | 2 | + | LINC01191 | | + |
| intron-exon | AC022272.1 | | + | LOC101928081 | | + |
| intron-exon | AC021088.1 | | + | SEMA5A | 5 | + |
| exon-intron | NRDC | 1 | + | LOC105378721 | 1 | + |
| exon-intron | LOC105374715 | | - | CTD-2066L21.3 | | - |
| exon-exon | LOC107984878 | 16 | - | NUDT7 | 16 | - |
| intron-exon | RP11-92F20.1 | | + | CUL3 | 2 | + |
| exon-intron | MRPS9-AS2 | | - | AC010884.2 | | - |
| exon-exon | LINC00353 | | - | LINC01040 | | - |
| intron-exon | AC122685.1 | | - | OR6C2 | | - |
| intron-exon | AL136097.2 | | + | LOC112268048 | | + |
| exon-intron | DPM1 | 20 | - | LINC01490 | | + |
| intron-exon | LOC105377547 | | - | CPA4 | | + |
| intron-exon | AL589986.1 | | + | PUDPP2 | | + |
| intron-exon | AC073254.1 | | - | EIF4E2 | 2 | - |
| exon-intron | ZNF544 | 19 | - | QRICH1 | 3 | - |
| intron-exon | LOC102723985 | | + | LOC105370921 | | + |
| intron-exon | MEIKIN | | + | ACSL6 | 5 | + |
| exon-intron | GTSE1 | 22 | + | TRMU | 22 | + |
| intron-exon | DGAT2L6 | | - | LOC107985683 | | - |
| intron-exon | AC073254.1 | | - | EIF4E2 | 2 | - |
| intron-exon | PLD5 | | - | TUBB8P6 | | - |
| exon-exon | MGST2 | 4 | + | PRDX6 | 1 | + |
| exon-intron | LOC105374060 | | - | RP11-384F7.1 | | - |
| exon-intron | LOC100506790 | | + | KCNMA1 | 10 | + |
| exon-exon | RNGTT | 6 | - | SMIM41 | | + |
| exon-intron | LOC107986413 | | - | SLC1A3 | 5 | - |
| exon-exon | HMSD | | + | SERPINB8 | | + |
| intron-exon | AP005230.1 | | - | LOC105371956 | | - |
| exon-exon | CEP128 | 14 | - | SLIRP | 14 | + |
| exon-intron | MEF2C-AS1 | | + | AC074131.1 | | + |
| intron-exon | ERFL | | + | LOC100505585 | | + |
| exon-intron | SHKBP1 | | + | THOC2 | X | + |
| exon-intron | PANCR | | - | ENPEP | 4 | - |
| exon-intron | EBNA1BP2 | 1 | - | LOC105378685 | 1 | - |
| intron-exon | AL031584.3 | X | - | LOC100128442 | X | - |
| exon-exon | LINC00844 | | + | LOC102724768 | | + |
| exon-intron | LINC02478 | 2 | - | AC092153.1 | 2 | - |
| exon-intron | CALHM6 | 6 | - | Z84488.1 | | - |
| exon-intron | ANKRD18DP | | - | LMLN | 3 | - |
| exon-intron | SLC35E1 | 19 | - | AC008764.1 | | - |
| exon-intron | LOC102724008 | | + | AC092650.1 | | + |
| exon-intron | VDAC1 | 5 | - | LINC02528 | | + |
| exon-exon | PLAAT4 | 11 | + | SSU72 | 1 | - |
| exon-intron | HTR1A | | + | AC122707.1 | | + |
| exon-exon | NUDT7 | 16 | + | LOC107984878 | | + |
| intron-exon | CKAP5 | 11 | + | BBS12 | | - |
| exon-intron | LINC00598 | | - | EEF1DP3 | 13 | + |
| intron-exon | SGSM1 | | + | S100A3 | | - |
| exon-exon | PTPN9 | 15 | - | BUB3 | 10 | + |
| exon-intron | PACRGL | | + | KCNIP4 | 4 | + |
| exon-intron | FGGY | 1 | - | LOC101926944 | | - |
| intron-exon | AC091059.1 | | - | YPEL2 | 17 | - |
| exon-exon | PGR-AS1 | 11 | + | LOC100420510 | | + |
| intron-exon | EIF4B | 12 | + | TNNC1 | 3 | + |
| exon-intron | G2E3 | 14 | + | SCFD1 | 14 | + |
| intron-exon | AC122685.1 | | + | OR6C68 | | + |
| exon-intron | TOX4 | 14 | + | CLHC1 | 2 | - |
| intron-exon | UCHL5 | 1 | + | RO60 | 1 | + |
| exon-intron | MIR4500HG | | - | LOC105370302 | | - |
| exon-intron | LINC00908 | 18 | + | LINC00683 | 18 | + |
| exon-intron | MRPL20P1 | | - | AC105094.2 | | + |
| intron-exon | LANCL1 | | - | LANCL1-AS1 | | - |
| exon-intron | UBAC2 | 13 | + | PPHLN1 | 12 | - |
| exon-exon | LINC01880 | | - | PHF14 | 7 | + |
| intron-exon | AL009181.1 | | - | OPRD1 | | - |
| exon-exon | IQCG | 3 | - | LRCH3 | 3 | - |
| intron-exon | RSPH3 | | + | LOC105378083 | | + |
| exon-exon | SDHA | | + | PDCD6 | 5 | + |
| intron-exon | RP11-92F20.1 | | + | CUL3 | 2 | + |
| exon-exon | TMEM104 | 17 | + | RPS2P5 | | + |
| intron-exon | AC122685.1 | | + | OR6C68 | | + |
| exon-exon | LINC02366 | | + | BAG2 | 6 | + |
| exon-intron | GZMA | | - | GZMAP1 | | - |
| exon-exon | LOC112267895 | | + | LINC02187 | | + |
| exon-exon | CCDC91 | 12 | - | LOC101928705 | 12 | - |
| exon-exon | LOC105377009 | | + | RBMS3 | 3 | + |
| intron-exon | TEX30 | | - | LOC105370337 | 13 | - |
| intron-exon | AC016553.1 | | - | LOC105374659 | | - |
| exon-exon | PHF14 | 7 | - | CACNA2D1 | 7 | + |
| exon-exon | PSMC5 | 17 | - | FOXP1 | 3 | + |
| intron-exon | AF124730.1 | | - | LOC105372767 | | - |
| intron-exon | AF124730.1 | | - | LOC105372767 | | - |
| intron-exon | AF124730.1 | | - | LOC105372767 | | - |
| intron-exon | PRKN | 6 | + | RNVU1-7 | 1 | + |
| exon-exon | CPSF6 | 12 | + | CPSF6 | 12 | - |
| exon-exon | SSNA1 | 9 | - | SSNA1 | 9 | + |
| exon-exon | SEC23B | 20 | + | SEC23B | 20 | - |
| exon-exon | SLCO5A1 | 8 | - | RPL12 | 9 | - |
| exon-exon | RNU4-2 | 12 | - | RPS21 | 20 | + |
| exon-intron | LBH | 2 | - | UBXN2A | 2 | + |
| exon-intron | MUC4 | 3 | - | RNR2 | MT | - |
| exon-exon | RPL23 | 17 | + | DARS1 | 2 | - |
| exon-exon | PI4KB | 1 | + | ATP6 | MT | + |
| intron-exon | AUTS2 | 7 | - | RNA45SN3 | 21 | + |
| exon-intron | USP24 | 1 | - | UBE2W | 8 | - |
| exon-exon | SNORD3B-1 | 17 | + | SNORD3A | 17 | - |
| exon-exon | RNA45SN2 | 21 | - | SEPHS1 | 10 | + |
| exon-exon | PNISR | 6 | - | PNISR | 6 | + |
| exon-intron | EHF | 11 | + | ARHGAP10 | 4 | - |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN2 | 21 | - |
| exon-intron | RNVU1-18 | 1 | + | RNR2 | MT | + |
| exon-exon | SNORD3B-1 | 17 | + | SNORD3B-2 | 17 | + |
| exon-exon | HSP90AB1 | 6 | - | HSP90AB1 | 6 | + |
| exon-intron | MAP7D1 | 1 | - | TXNRD1 | 12 | - |
| intron-exon | CTC-329D1.2 | 5 | - | RPL36 | 19 | - |
| exon-intron | IGHG4 | 14 | - | IGH | 14 | - |
| intron-exon | CLRN1-AS1 | 3 | - | EIF2A | 3 | - |
| exon-exon | PNPO | 17 | - | ALDH1A2 | 15 | + |
| exon-intron | PRRC2A | 6 | - | CSMD2 | 1 | - |
| exon-exon | SDCBP | 8 | - | SUZ12 | 17 | + |
| exon-exon | PSAP | 10 | + | PSAP | 10 | - |
| exon-exon | PSMC3 | 11 | - | AKIRIN1 | 1 | + |
| exon-exon | DEGS1 | 1 | + | SERINC1 | 6 | - |
| exon-intron | CDR2L | 17 | + | RNR2 | MT | + |
| exon-exon | THSD4 | 15 | + | PTMA | 2 | + |
| exon-intron | NQO1 | 16 | - | NFAT5 | 16 | - |
| exon-intron | CKLF | 16 | + | OSBPL2 | 20 | - |
| exon-exon | RRAD | | - | RRAD | | + |
| exon-exon | LIMA1 | 12 | - | DDR1 | 6 | + |
| exon-intron | RUVBL2 | | + | LOC107985697 | | - |
| exon-intron | SLC39A7 | 6 | + | LOC105372440 | | + |
| exon-intron | MAP3K10 | | + | LOC102724843 | 21 | + |
| exon-intron | RPL27A | 11 | + | RBL1 | 20 | - |
| exon-exon | FXR2 | 17 | + | FXR2 | 17 | - |
| exon-exon | GMPS | 3 | - | GMPS | 3 | + |
| exon-exon | APOL6 | 22 | - | FAUP1 | 18 | - |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-exon | RNF138 | | - | RNF138 | | + |
| exon-exon | ACTG1 | 17 | + | ACTG1 | 17 | - |
| intron-exon | SPAG5-AS1 | 17 | + | KIAA0100 | 17 | - |
| intron-exon | XRCC6P1 | | - | ANP32B | 9 | + |
| exon-exon | ATP8B5P | | - | ATP8B5P | 9 | + |
| exon-exon | CD99L2 | X | + | CD99L2 | X | - |
| exon-exon | E2F1 | 20 | + | E2F1 | 20 | - |
| exon-exon | MYO1C | 17 | + | MYO1C | 17 | - |
| exon-exon | TANC2 | 17 | - | TANC2 | 17 | + |
| exon-exon | CD320 | 19 | - | CHD1L | 1 | + |
| exon-exon | REV3L | 6 | - | NDUFS3 | 11 | + |
| intron-exon | ZBTB24 | | - | MICAL1 | 6 | - |
| exon-exon | AMZ2 | 17 | + | SCAP | 3 | - |
| exon-intron | PSMA6 | 14 | + | LOC105371574 | 17 | - |
| exon-intron | ATL3 | 11 | - | PLAAT3 | 11 | - |
| exon-exon | PHLDA1 | 12 | - | MBTD1 | 17 | - |
| exon-exon | RPLP0 | 12 | - | RPS23 | 5 | - |
| exon-intron | COX6A1 | 12 | + | UBR2 | 6 | - |
| exon-intron | PPIA | 7 | + | GPBP1 | 5 | + |
| exon-exon | NPM1 | 5 | + | PTMA | 2 | + |
| exon-intron | BTG1 | 12 | - | OSBP2 | 22 | + |
| exon-exon | BHLHE40 | 3 | + | RPL13AP22 | 12 | - |
| exon-intron | ATP6 | MT | + | COX3 | MT | + |
| exon-intron | PPDPF | 20 | + | LOC107985706 | Y | - |
| exon-intron | MDH2 | 7 | + | LOC107985325 | 19 | + |
| exon-exon | SH3GLB1 | 1 | + | HSP90AB3P | 4 | + |
| exon-intron | VPS51 | 11 | + | RAP1B | 12 | - |
| exon-exon | PTP4A2 | 1 | + | RPL27 | 17 | + |
| exon-exon | PAICS | 4 | - | PAICS | 4 | + |
| exon-exon | LCN6 | 9 | - | LCN10 | 9 | - |
| exon-intron | MRPS10 | 6 | - | SEC13 | 3 | - |
| exon-exon | HSP90B1 | 12 | - | HSP90B1 | 12 | + |
| exon-exon | RCC1 | 1 | + | CUL2 | 10 | - |
| exon-exon | RFX7 | 15 | + | RFX7 | 15 | - |
| exon-exon | C1GALT1C1 | | - | MCTS1 | | - |
| intron-exon | LOC107985219 | 1 | + | COPA | 1 | - |
| exon-exon | PIK3CG | | - | PIK3CG | 7 | + |
| exon-intron | RPL9P8 | 15 | - | UBE2Q2P2 | 15 | - |
| exon-intron | TRMT61A | 14 | + | TMEM211 | | - |
| exon-exon | LOC100128676 | | + | TBCCD1 | | - |
| exon-exon | ACTB | 7 | + | RSF1 | 11 | - |
| exon-exon | ATP5F1B | 12 | + | ATP5F1B | 12 | - |
| exon-exon | DENND5A | 11 | + | DENND5A | 11 | - |
| exon-exon | HNRNPC | 14 | + | HNRNPC | 14 | - |
| exon-exon | ACTB | 7 | + | ACTB | 7 | - |
| exon-exon | RPL7P15 | | - | TUBA1B | 12 | - |
| exon-exon | TTC26 | 7 | + | TTC26 | | - |
| exon-exon | XPO1 | 2 | + | XPO1 | 2 | - |
| exon-exon | TDG | | - | TDG | 12 | + |
| exon-exon | PTPN7 | 1 | + | PTPN7 | 1 | - |
| exon-intron | CTNNB1 | 3 | + | SHANK2 | 11 | - |
| exon-intron | TAGLN2 | 1 | - | EPSTI1 | 13 | - |
| intron-exon | NCOA2 | 8 | - | SLC7A1 | 13 | - |
| exon-intron | WDR77 | 1 | - | NPIPB9 | 16 | - |
| exon-intron | YWHAZP3 | | + | PPT2-EGFL8 | 6 | + |
| exon-exon | PAPPA-AS1 | 9 | - | PTMAP2 | 5 | + |
| exon-exon | EIF4G2 | 11 | - | STIP1 | 11 | + |
| exon-exon | SBF1 | 22 | + | C2 | 6 | + |
| intron-exon | IGH | 14 | + | ZNF440 | 19 | + |
| exon-exon | RPL13P12 | 17 | + | RPL10P9 | 5 | - |
| exon-intron | CCL2 | 17 | - | IGH | 14 | + |
| intron-exon | TXNRD1 | 12 | - | PCMT1 | 6 | + |
| exon-exon | EFHC1 | 6 | - | PTPN23 | 3 | + |
| exon-exon | CADM1 | 11 | + | MYO18A | 17 | + |
| exon-intron | ACTN1 | 14 | + | CDKAL1 | 6 | - |
| exon-exon | CDYL | 6 | - | RPL10P16 | 19 | - |
| intron-exon | MTO1 | 6 | + | SLC31A1 | 9 | - |
| exon-intron | CST3 | 20 | + | PANK2 | 20 | + |
| exon-exon | ATXN7 | 3 | + | ARF1 | 1 | - |
| intron-exon | SSH2 | 17 | + | COX3 | MT | + |
| exon-exon | RPL38 | 17 | - | NABP1 | 2 | + |
| exon-exon | PSMB1 | 6 | + | GPBP1 | 5 | + |
| exon-exon | VDR | 12 | + | SLC1A5 | 19 | + |
| exon-exon | UBQLN1 | 9 | + | IGFBP4 | 17 | + |
| exon-exon | RNPS1 | 16 | + | NPHP3-ACAD11 | 3 | - |
| intron-exon | AC004112.1 | 7 | - | FTH1P7 | 13 | + |
| exon-intron | RPS3 | 11 | - | LOC101927066 | 8 | + |
| exon-exon | CRTAM | 11 | - | ACTG1 | 17 | - |
| exon-exon | RPS3 | 11 | - | RPS3 | 11 | + |
| exon-exon | GFRA1 | 10 | + | RNPS1 | 16 | + |
| exon-exon | RPL13 | 16 | - | MOCS3 | 20 | + |
| intron-exon | FOXN3 | 14 | + | CD74 | 5 | - |
| exon-exon | GOLGA6L2 | 15 | - | GOLGA6L1 | 15 | - |
| exon-exon | RPS3A | 4 | + | AKIRIN1 | 1 | + |
| exon-exon | RHOBTB3 | 5 | + | SENP5 | 3 | + |
| exon-intron | S100A10 | 1 | - | TSPAN9 | 12 | - |
| exon-exon | HMGA2 | 12 | - | HMGA2 | 12 | + |
| exon-intron | RPS16 | 19 | - | UGCG | 9 | + |
| exon-exon | ELL | 19 | - | HERC2P7 | 15 | - |
| exon-intron | PRDX1 | 1 | - | LOC105376030 | | + |
| exon-intron | NDUFS5 | 1 | + | FCGBP | 19 | - |
| exon-exon | ARIH1 | 15 | - | ARIH1 | 15 | + |
| intron-exon | LOC105375904 | 8 | - | PEX26 | 22 | - |
| exon-exon | KLRG1 | 12 | - | KLRG1 | 12 | + |
| exon-exon | LARP7 | 4 | + | SPRED1 | 15 | + |
| exon-exon | BCLAF3 | X | + | BCLAF3 | X | - |
| exon-intron | YY1 | 14 | + | COLEC12 | 18 | + |
| exon-exon | KCTD15 | 19 | - | KCTD15 | 19 | + |
| exon-intron | RPL35A | 3 | + | LINC02582 | 18 | + |
| exon-intron | ARPP19 | | - | MYO18B | 22 | - |
| exon-exon | RPUSD1 | 16 | - | LOC105376899 | | + |
| exon-intron | HACD2 | 3 | - | SSTR5-AS1 | | - |
| exon-intron | SNRPD2 | 19 | - | MSI2 | 17 | - |
| exon-intron | HNRNPLL | 2 | - | NT5M | | - |
| exon-exon | HNRNPL | 19 | - | RASSF5 | 1 | + |
| exon-exon | POLR2B | 4 | + | DCAF13 | 8 | + |
| exon-exon | YWHAZ | 8 | - | NDUFB9 | 8 | + |
| exon-exon | SLC35A5 | 3 | - | SLC35A5 | 3 | + |
| exon-exon | NAA20 | 20 | - | NAA20 | 20 | + |
| exon-intron | IDH2 | 15 | - | SHANK3 | | - |
| intron-exon | MAP2K1 | 15 | + | SLC48A1 | 12 | + |
| exon-exon | ORAI1 | | - | ORAI1 | | + |
| intron-exon | LRRC37A2 | 17 | + | GRB2 | 17 | - |
| exon-exon | GNAS | 20 | - | GNAS | 20 | + |
| exon-exon | HOOK1 | 1 | - | HOOK1 | 1 | + |
| exon-intron | THBS1 | 15 | + | LINGO2 | | + |
| exon-intron | C1QBP | 17 | - | WDR20 | 14 | - |
| exon-exon | PAFAH1B2 | 11 | + | PTTG1 | 5 | + |
| exon-exon | SETD6 | 16 | + | CNOT1 | 16 | - |
| exon-intron | SLC35E1 | 19 | - | LOC112267968 | 6 | + |
| exon-exon | SMAP2 | 1 | + | RPS24 | 10 | + |
| exon-intron | ATP2B1 | 12 | - | SLC25A14 | X | - |
| exon-intron | SLBP | 4 | - | DNMT1 | 19 | + |
| exon-intron | ZC3H13 | 13 | - | SYNJ1 | 21 | + |
| intron-exon | TRIM74 | 7 | - | RPL30 | 8 | - |
| exon-intron | FBLN1 | 22 | + | SDK2 | 17 | - |
| exon-exon | TOMM70 | 3 | + | TOMM70 | 3 | - |
| exon-intron | STIP1 | | + | MIA2 | 14 | - |
| exon-exon | PTAR1 | 9 | + | PTAR1 | 9 | - |
| exon-intron | FTH1 | 11 | - | SCHLAP1 | 2 | - |
| exon-exon | GALNT1 | 18 | + | NFX1 | 9 | + |
| exon-exon | TOR1AIP1 | | + | LMO4 | 1 | + |
| exon-intron | NFYC | 1 | + | GREB1L | 18 | + |
| exon-exon | FADS1 | 11 | - | CLDN1 | 3 | - |
| exon-intron | CCNB1 | 5 | + | ARMH4 | 14 | + |
| intron-exon | LOC101927118 | 8 | + | SEMA3C | 7 | - |
| exon-intron | VDAC1 | 5 | + | VDAC1P2 | X | - |
| exon-exon | TRAK1 | 3 | - | TRAK1 | 3 | + |
| exon-exon | HMGCS1 | 5 | + | HMGCS1 | 5 | - |
| exon-intron | IPO7 | 11 | + | NCOA1 | 2 | - |
| exon-exon | ESD | 13 | - | SHISA5 | 3 | - |
| exon-intron | SRC | 20 | + | LOC107987347 | Y | + |
| exon-exon | USP1 | 1 | - | USP1 | 1 | + |
| exon-intron | LUC7L3 | 17 | + | AL713998.4 | | + |
| intron-exon | CAB39L | 13 | - | AHCYL1 | 1 | + |
| exon-exon | FBXL3 | 13 | - | IER3IP1 | 18 | - |
| exon-intron | MGAT4A | 2 | - | DMGDH | 5 | + |
| intron-exon | RNU6-33P | 4 | - | PKM | 15 | - |
| exon-intron | SCD | 10 | + | HSPB8 | 12 | + |
| exon-intron | SQSTM1 | 5 | + | STOML3 | 13 | - |
| exon-intron | COPS2 | 15 | - | LINC02055 | 8 | - |
| exon-intron | CYREN | 7 | - | PPP4R1L | | - |
| exon-intron | NAE1 | 16 | - | TDRD5 | 1 | - |
| exon-intron | SF3B3 | 16 | + | BCAS3 | 17 | - |
| exon-exon | FGR | 1 | - | SQSTM1 | 5 | - |
| exon-exon | IFI30 | 19 | - | IFI30 | 19 | + |
| exon-exon | TDO2 | 4 | - | GZMB | 14 | + |
| exon-exon | DAZAP2 | 12 | - | CD68 | 17 | - |
| intron-exon | HS6ST3 | 13 | - | DAZAP2 | 12 | + |
| exon-exon | KCNQ4 | | + | LITAF | 16 | - |
| exon-exon | GSTO1 | 10 | - | PLIN2 | 9 | - |
| exon-exon | SQSTM1 | 5 | + | PLIN2 | 9 | + |
| exon-exon | RAPGEF1 | 9 | - | DCK | 4 | - |
| exon-exon | EMP1 | 12 | + | TTC28 | 22 | - |
| exon-exon | ADCY1 | 7 | + | JUN | 1 | + |
| exon-exon | IFI30 | 19 | - | TBC1D2 | | - |
| exon-exon | MBP | 18 | + | GNB1 | 1 | - |
| exon-exon | AASDH | 4 | + | IRF3 | 19 | + |
| exon-exon | HLA-A | 6 | + | IGBP1 | X | + |
| exon-exon | PPIF | 10 | + | CYBA | 16 | + |
| exon-intron | LOC105375855 | | + | AC090796.1 | | + |
| exon-exon | NELFB | 9 | + | RAB13 | 1 | + |
| exon-exon | STEAP3 | 2 | + | SORL1 | 11 | - |
| exon-exon | MCMBP | | - | MCMBP | 10 | + |
| exon-intron | TMSB10 | 2 | + | ZNF568 | | - |
| exon-exon | KMT2D | 12 | - | CMBL | 5 | - |
| exon-intron | RPL7A | 9 | + | SMOC1 | 14 | - |
| exon-exon | MAP4 | 3 | + | MAP4 | 3 | - |
| exon-exon | H2AX | 11 | - | NOC2L | 1 | - |
| exon-intron | RPLP2 | 11 | + | ZNF75A | 16 | + |
| exon-exon | STAG3L1 | 7 | + | KRT8 | 12 | - |
| exon-exon | ACTG1 | 17 | + | ACTG1 | 17 | - |
| exon-intron | RPL27AP6 | 6 | - | AC112770.1 | | + |
| exon-exon | MAT2A | 2 | + | UBE2O | 17 | - |
| exon-exon | GABRB3 | 15 | - | DDX1 | 2 | + |
| exon-exon | EEF1G | 11 | + | CDIPT | 16 | - |
| exon-intron | GPX1 | 3 | - | LOC105373137 | X | - |
| exon-exon | EFCAB14 | 1 | - | ATPAF1 | 1 | - |
| exon-exon | HMGA1 | 6 | - | HMGA1 | 6 | + |
| exon-intron | MTX1 | | + | MTX1P1 | 1 | + |
| exon-intron | RPLP2 | 11 | + | LOC105370052 | 12 | + |
| exon-intron | RPL10AP6 | 3 | - | PTPRG | 3 | - |
| exon-intron | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-exon | PVT1 | 8 | + | LINC00824 | 8 | - |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-intron | POLR2J2 | 7 | - | TEX22 | | - |
| exon-exon | MAPK9 | 5 | - | FTH1 | 11 | - |
| intron-exon | GAS5 | 1 | - | DPH2 | 1 | + |
| exon-exon | BSG | 19 | - | BSG | 19 | + |
| intron-exon | PLOD3 | 7 | + | ZNHIT1 | 7 | + |
| exon-intron | ALMS1P1 | | + | NAT8B | | + |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-intron | USP22 | 17 | - | SLC25A15 | | - |
| intron-exon | GSTM5 | 1 | + | GSTM3 | 1 | + |
| exon-exon | ZNRF2P1 | 7 | + | DPY19L1P2 | 7 | + |
| intron-exon | FUT10 | | - | RBM4 | 11 | + |
| intron-exon | AL023754.1 | | - | LOC105372898 | | - |
| intron-exon | AL023754.1 | | - | LOC105372898 | | - |
| intron-exon | GALK2 | 15 | + | DDX54 | | - |
| exon-exon | IER5L | 9 | - | RRAGC | 1 | - |
| exon-intron | PAXX | | + | LINC01707 | | - |
| exon-intron | GAPDH | 12 | + | AP1G1 | 16 | + |
| intron-exon | DNAJC4 | 11 | - | NUDT22 | 11 | - |
| exon-exon | SLC25A44 | 1 | + | LMNA | 1 | + |
| exon-intron | CIAO2B | 16 | - | RRAD | | - |
| exon-exon | FBXW2 | 9 | - | HDGF | 1 | - |
| exon-exon | RPS17 | 15 | + | RPS17P16 | 22 | + |
| exon-intron | MRPL52 | 14 | + | LINC01442 | | + |
| exon-intron | CHMP6 | | + | TEAD1 | 11 | - |
| exon-intron | RPL23AP42 | 3 | - | LINC02067 | 3 | - |
| exon-exon | IGHA1 | 14 | - | IGHA2 | 14 | - |
| exon-exon | PTGES2 | 9 | + | PTGES2 | 9 | - |
| exon-intron | RPS11P5 | 12 | + | LOC107986355 | | - |
| exon-exon | RPL10P9 | 5 | + | H3-3A | 1 | - |
| exon-exon | ELP3 | 8 | + | S100A8 | 1 | + |
| intron-exon | TP53BP1 | 15 | + | SERF2-C15ORF63 | 15 | + |
| exon-intron | USP6NL | 10 | - | UPF2 | 10 | - |
| intron-exon | DLG2 | 11 | + | MTA1 | 14 | + |
| exon-exon | ETNK1 | 12 | + | C2CD5 | 12 | - |
| exon-exon | P3H4 | 17 | - | TAPBP | 6 | - |
| exon-exon | SMG1P3 | 16 | - | NPIPB3 | 16 | - |
| exon-intron | LOC105378210 | | + | AC008696.2 | | + |
| exon-exon | DENND2D | 1 | + | DENND2D | 1 | - |
| exon-exon | SRFBP1 | 5 | - | SRFBP1 | 5 | + |
| exon-intron | FAM111A | | + | ANKFN1 | | + |
| exon-intron | ACTB | 7 | - | ANK2 | 4 | + |
| exon-intron | YWHAQ | 2 | - | DIRC3 | | + |
| exon-exon | MYH9 | 22 | - | MYH9 | 22 | + |
| exon-exon | GCN1 | 12 | + | GCN1 | 12 | - |
| exon-exon | H3C14 | 1 | - | HNRNPK | 9 | - |
| exon-exon | ARHGDIB | 12 | + | ENO1 | 1 | - |
| exon-intron | MACF1 | 1 | - | FBXL12 | | + |
| exon-exon | ACBD5 | 10 | + | LRRC37A6P | 10 | + |
| exon-exon | LCORL | 4 | + | LCORL | 4 | - |
| exon-exon | MTMR10 | 15 | - | TSPAN14 | 10 | + |
| exon-exon | LOC105378443 | 10 | + | PIK3AP1 | | - |
| exon-exon | AUTS2 | 7 | - | AUTS2 | 7 | + |
| exon-exon | ARPP21 | 3 | - | ARPP21 | 3 | + |
| intron-exon | ZNF32-AS3 | 10 | + | ZNF32 | 10 | - |
| exon-intron | ATF5 | 19 | + | SARNP | 12 | + |
| exon-exon | MAP4K5 | 14 | + | MAP4K5 | 14 | - |
| exon-exon | DLG1 | 3 | - | PCYT1A | 3 | - |
| exon-exon | CLIC4 | 1 | - | CLIC4 | 1 | + |
| exon-exon | GAPDHP65 | X | + | GAPDH | 12 | + |
| exon-exon | BAG2 | 6 | - | BAG2 | 6 | + |
| exon-exon | TRMT13 | 1 | - | TRMT13 | 1 | + |
| exon-intron | ADA | 20 | - | ZFAND3 | 6 | - |
| exon-exon | WDR45 | X | + | WDR45 | | - |
| exon-exon | AHCTF1 | 1 | + | AHCTF1 | 1 | - |
| exon-intron | RPS9 | 19 | + | LRP6 | 12 | + |
| exon-exon | PSMD11 | 17 | + | LCP1 | 13 | - |
| exon-intron | TYMS | 18 | + | AGTPBP1 | | + |
| intron-exon | DOCK1 | 10 | + | HNRNPUL1 | 19 | + |
| exon-exon | COPB1 | 11 | + | COPB1 | 11 | - |
| exon-exon | LOC729973 | 1 | + | CCT5 | 5 | + |
| exon-exon | SLC4A2 | 7 | + | RPL7P1 | 5 | + |
| exon-intron | RPL9P8 | 15 | - | YARS1 | 1 | - |
| exon-exon | NUP188 | 9 | - | NUP188 | 9 | + |
| exon-exon | IGLV3-9 | | + | IGLL5 | 22 | + |
| intron-exon | AIFM1 | X | - | CLIC1 | 6 | - |
| exon-intron | HLA-E | 6 | + | NR2C2 | 3 | - |
| intron-exon | LOC101927815 | | + | LOC105377785 | | + |
| exon-intron | SDHAF2 | 11 | + | PPP1R32 | 11 | - |
| intron-exon | LOC105370223 | | - | PBLD | | - |
| exon-intron | ZPR1 | 11 | - | MTIF2 | 2 | + |
| exon-exon | ARNT2 | 15 | - | ARNT2 | 15 | + |
| exon-intron | KRT7 | 12 | + | NUBPL | 14 | - |
| exon-exon | SURF4 | 9 | + | SURF4 | 9 | - |
| exon-exon | TK1 | 17 | + | TK1 | 17 | - |
| exon-exon | BUB1 | 2 | + | BUB1 | 2 | - |
| exon-exon | DNAJC8P1 | | - | IMP4 | 2 | + |
| exon-exon | ANKHD1-EIF4EBP3 | 5 | - | ANKHD1-EIF4EBP3 | 5 | + |
| exon-intron | LSM10 | 1 | - | PRDM11 | | + |
| exon-exon | PDLIM2 | 8 | - | PDLIM2 | 8 | + |
| exon-intron | RPL35 | 9 | - | LOC642846 | 12 | + |
| exon-intron | NAA10 | X | - | DEPDC5 | 22 | - |
| exon-exon | PIR | X | - | PIR-FIGF | X | - |
| exon-intron | RFK | 9 | + | RPSAP9 | | + |
| exon-intron | LOC102723591 | X | - | U52111.1 | | - |
| exon-intron | PTMS | 12 | + | ZFP14 | 19 | + |
| intron-exon | ARHGDIA | 17 | - | TUBB | 6 | + |
| exon-intron | MRPL52 | 14 | + | ARHGEF18 | 19 | + |
| exon-exon | FN1 | 2 | - | YIPF4 | 2 | + |
| intron-exon | SLC39A1 | 1 | - | CRTC2 | 1 | - |
| exon-exon | LHX1-DT | 17 | - | DUSP14 | 17 | + |
| intron-exon | KRT79 | | - | KRT4 | 12 | - |
| exon-exon | BRD9 | 5 | - | ZDHHC11 | | - |
| exon-intron | TPD52 | 8 | - | AC036214.3 | | - |
| exon-exon | MALAT1 | 11 | + | NSRP1 | 17 | + |
| exon-exon | LOC105372317 | | + | LOC105372316 | | + |
| exon-exon | NBR2 | 17 | + | NFYB | 12 | - |
| intron-exon | IGK | 2 | - | IGKV3-15 | 2 | - |
| intron-exon | ARHGEF28 | | + | CCDC198 | | - |
| exon-exon | DDOST | 1 | - | ND4 | MT | + |
| intron-exon | AC007679.1 | | + | INO80D | 2 | + |
| exon-intron | MGP | 12 | - | C12orf60 | 12 | - |
| exon-exon | GUSBP11 | 22 | - | DRICH1 | 22 | - |
| exon-intron | UBB | 17 | + | LOC100506990 | 8 | + |
| exon-intron | LOC728811 | | - | AC147055.1 | | - |
| exon-exon | PPP4R3B | 2 | - | PSME4 | 2 | - |
| exon-exon | LOC107986469 | | + | LOC285626 | | + |
| intron-exon | IMMT | 2 | - | ND4L | MT | + |
| intron-exon | HNF1A | 12 | - | HNF1A-AS1 | 12 | - |
| exon-intron | LOC105371716 | 17 | + | PIPOX | 17 | + |
| intron-exon | SRR | 17 | + | ND2 | MT | + |
| exon-intron | LOC105375983 | | + | AL162725.2 | | + |
| exon-exon | IMMP1L | 11 | - | ELP4 | 11 | + |
| intron-exon | HNF1A | 12 | - | HNF1A-AS1 | 12 | - |
| exon-intron | ITPRID2 | 2 | + | FBXO31 | 16 | - |
| exon-intron | MALAT1 | 11 | + | LIFR | 5 | - |
| exon-intron | METAP2 | 12 | + | LOC105373013 | | - |
| intron-exon | RASA1 | 5 | + | WNT5A | 3 | - |
| exon-intron | PITHD1 | 1 | + | AL031073.2 | | - |
| exon-intron | AHNAK | 11 | - | PHLDB3 | 19 | + |
| exon-intron | TIMP3 | 22 | + | LINC01920 | | - |
| exon-intron | CYP19A1 | 15 | - | MLXIP | 12 | - |
| exon-exon | AHNAK | 11 | - | GPNMB | 7 | + |
| exon-intron | PSG3 | 19 | - | NOTCH2NLA | 1 | + |
| exon-intron | CGA | 6 | - | LOC105378938 | | + |
| exon-intron | FLNB | 3 | + | LOC107986769 | 7 | - |
| exon-intron | CDC42P6 | 4 | - | GBA3 | 4 | - |
| exon-intron | PSG9 | 19 | - | LOC105369625 | 12 | - |
| exon-intron | CYP19A1 | 15 | - | WWOX | 16 | - |
| intron-exon | GRIP1 | 12 | - | SEC62 | 3 | + |
| exon-intron | PON2 | 7 | - | TANGO6 | 16 | - |
| intron-exon | ANK2 | 4 | + | RPL7A | 9 | + |
| exon-exon | SCD | 10 | - | TMEM154 | | + |
| intron-exon | AC132219.1 | | + | SNX16 | 8 | + |
| intron-exon | AC008050.1 | 14 | + | LOC105370577 | | + |
| exon-intron | LINC00504 | | + | CPEB2-DT | 4 | + |
| intron-exon | TRA | 14 | - | TRAV8-6 | | - |
| exon-exon | VPS36 | 13 | - | THSD1 | | - |
| exon-exon | USPL1 | 13 | + | RPL21P16 | 10 | - |
| exon-exon | WDR77 | 1 | - | RPS3A | 4 | + |
| exon-exon | FTH1 | 11 | - | ARPC5L | 9 | + |
| exon-intron | HMGB1P5 | 3 | + | LOC105377448 | | + |
| exon-exon | IQGAP1 | 15 | + | IDH2 | 15 | - |
| intron-exon | LOC101928525 | 9 | - | MRPS2 | 9 | + |
| exon-exon | MTMR3 | 22 | + | APOH | 17 | - |
| exon-exon | EML3 | 11 | + | EML3 | 11 | - |
| exon-exon | LMAN2 | 5 | + | LMAN2 | 5 | - |
| exon-exon | FAU | 11 | + | BAD | 11 | - |
| exon-exon | NSUN5P2 | | - | NSUN5 | 7 | + |
| exon-exon | ZBTB47 | | - | ZBTB47 | 3 | + |
| exon-exon | HSF1 | 8 | + | RPS3A | 4 | + |
| exon-exon | DDX1 | 2 | - | RPL28 | 19 | + |
| exon-exon | DPH3P1 | 20 | + | SNRPB | 20 | - |
| exon-exon | DBNDD1 | 16 | + | H3P47 | | + |
| exon-exon | TESC | 12 | - | PSMA7 | 20 | - |
| exon-exon | APRT | 16 | + | APRT | 16 | - |
| intron-exon | LOC105369989 | 12 | + | PLBD2 | 12 | + |
| exon-exon | RPL3 | 22 | - | RPL3P4 | 14 | - |
| exon-intron | CCND1 | 11 | + | CEP85L | 6 | + |
| exon-intron | ENO1 | 1 | - | CRISP3 | 6 | + |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-exon | LINC01531 | | + | LOC101927522 | | + |
| exon-exon | PRPF8 | 17 | - | RPL37A | 2 | + |
| exon-intron | HNRNPA2B1 | 7 | - | MTND2P28 | 1 | + |
| exon-exon | ACTR3 | 2 | - | ABT1 | 6 | + |
| exon-exon | RPSA | 3 | - | RPSAP58 | 19 | + |
| intron-exon | GSTM5 | 1 | + | GSTM3 | 1 | + |
| exon-exon | RPL41 | 12 | - | RTN2 | | - |
| exon-intron | ACKR2 | 3 | + | KRBOX1 | 3 | + |
| exon-intron | RPS11P5 | 12 | + | LOC105376637 | | + |
| exon-exon | UBA52 | 19 | - | VPS28 | 8 | - |
| exon-intron | LOC107986397 | | - | AC091849.2 | | - |
| exon-intron | CYB561A3 | 11 | + | TMEM138 | 11 | + |
| intron-exon | SFTPB | 2 | + | HNRNPA1 | 12 | + |
| exon-exon | NEAT1 | 11 | + | PPM1A | 14 | + |
| exon-intron | LIMS1 | 2 | + | ITK | 5 | + |
| exon-exon | RPE | 2 | + | KANSL1L-AS1 | 2 | + |
| intron-exon | ZFPM2 | 8 | + | RPS6KA3 | X | - |
| exon-exon | RPS24 | 10 | + | LUZP1 | 1 | - |
| exon-intron | ISCA1 | 9 | - | LOC101927623 | | - |
| exon-intron | RPL10AP6 | 3 | - | PTPRG | 3 | - |
| exon-exon | GRINA | 8 | - | GRINA | 8 | + |
| exon-exon | FAU | 11 | + | CALR | 19 | - |
| exon-exon | SRGAP1 | 12 | - | SYNCRIP | 6 | + |
| exon-intron | ATP5PF | 21 | - | MAP2K1 | 15 | - |
| exon-exon | SNHG32 | 6 | + | COMMD2 | 3 | - |
| exon-exon | LINC00958 | 11 | - | TEAD1 | 11 | - |
| exon-intron | LOC653513 | 1 | - | AC245297.3 | 1 | - |
| exon-intron | LINC00879 | | + | RPS18P6 | | + |
| intron-exon | BEND3 | | - | CD24 | 6 | - |
| exon-exon | RPL14 | 3 | + | ATXN3 | 14 | - |
| exon-exon | SELENOOLP | | - | FAM238B | | - |
| exon-intron | RPL21P119 | | - | MIR4300HG | | + |
| exon-intron | ND4L | MT | + | ND4 | MT | + |
| intron-exon | LOC112679202 | | - | ABO | | - |
| exon-intron | MRPL52 | 14 | + | TIGAR | 12 | + |
| exon-exon | RCBTB1 | 13 | - | ATP6 | MT | + |
| exon-intron | RPL32 | 3 | - | RRM2 | 2 | + |
| exon-intron | IFITM2 | 11 | + | UBE2E2 | 3 | - |
| exon-intron | MRPL30 | 2 | + | LOC107986961 | | + |
| exon-intron | RPL21P119 | | - | MYBL1 | | + |
| exon-intron | TMEM115 | | - | GALC | 14 | - |
| exon-exon | RNU6-2 | 19 | + | AP4B1 | 1 | - |
| exon-intron | TM9SF4 | 20 | + | RSL24D1P6 | | + |
| exon-exon | MMP2 | 16 | + | HNRNPA2B1 | 7 | - |
| exon-intron | ZNF503 | 10 | - | KCTD20 | 6 | - |
| intron-exon | KCNQ5 | 6 | - | LOC112267960 | | - |
| exon-intron | CYB5B | 16 | + | MARCHF3 | 5 | + |
| exon-exon | RPL7 | 8 | - | PTMA | 2 | + |
| intron-exon | TCL1A | 14 | + | LOC107984703 | 14 | + |
| exon-intron | TMED9 | | + | PTPRD | 9 | + |
| exon-exon | NUP160 | 11 | - | GLOD4 | 17 | - |
| intron-exon | TGDS | | - | WASHC2A | 10 | + |
| exon-exon | RPL13A | 19 | + | RPL3 | 22 | - |
| exon-intron | RPS19 | 19 | + | SMYD3 | 1 | - |
| intron-exon | AL080276.2 | 6 | + | MTRF1L | 6 | + |
| exon-exon | CILK1 | 6 | + | KMT2E | 7 | + |
| exon-exon | FTH1 | 11 | + | EXTL2 | 1 | - |
| exon-intron | IGKV1-9 | 2 | - | IGK | 2 | - |
| exon-exon | RPL14 | 3 | + | MED12 | X | + |
| exon-intron | LOC105374690 | 2 | + | LOC100129434 | | + |
| exon-exon | NPM1 | 5 | + | NAP1L1 | 12 | - |
| exon-exon | FTH1 | 11 | - | NT5C3A | 7 | - |
| exon-exon | HBG1 | 11 | - | ANXA7 | 10 | - |
| exon-exon | CDCA7 | 2 | + | SRSF5 | 14 | + |
| exon-exon | LOC105379110 | | - | LOC105379109 | 5 | - |
| exon-intron | LOC645139 | 17 | + | LOC105375947 | | - |
| exon-exon | RPS11 | 19 | - | RPS11 | 19 | + |
| exon-exon | CITED2 | 6 | - | UHMK1 | 1 | + |
| exon-exon | CCDC32 | 15 | - | SFTPC | 8 | + |
| exon-intron | IGKV1D-39 | 2 | + | IGK | 2 | - |
| intron-exon | LOC107985368 | | - | RPL35 | 9 | - |
| exon-exon | SNHG32 | 6 | + | PTMA | 2 | + |
| exon-exon | TMA7 | 3 | + | RPL6 | 12 | - |
| exon-exon | SAMD4B | 19 | - | ACTR2 | 2 | + |
| exon-intron | RPSAP26 | 2 | - | COMMD1 | 2 | - |
| exon-intron | MSH6 | 2 | + | LOC105374589 | | + |
| exon-intron | MT1X | 16 | + | ACSBG1 | 15 | - |
| intron-exon | HTR1F | 3 | - | LOC105377198 | | - |
| exon-intron | CDC42P6 | 4 | - | GBA3 | 4 | - |
| intron-exon | GTF2H2 | 5 | - | NAIP | 5 | - |
| intron-exon | MIS12 | 17 | - | DERL2 | 17 | - |
| exon-exon | HLA-E | 6 | + | ETF1 | 5 | - |
| exon-intron | ENPP2 | 8 | - | MME | 3 | - |
| exon-intron | H4C6 | 6 | + | UBE2V2 | 8 | + |
| intron-exon | TCL1A | 14 | + | LOC107984703 | 14 | + |
| exon-intron | LOC107986824 | 7 | + | AC002451.1 | 7 | + |
| intron-exon | COL4A4 | 2 | + | COL4A3 | 2 | + |
| exon-intron | STAG3L2 | 7 | - | LOC106029312 | | - |
| exon-exon | ICAM1 | 19 | + | RTN4 | 2 | - |
| intron-exon | AP1G1 | 16 | - | ABCA6 | 17 | - |
| intron-exon | IGH | 14 | - | IGHV3-7 | 14 | - |
| intron-exon | MFN1 | 3 | - | CHSY1 | | - |
| exon-intron | JOSD1 | 22 | - | CRISPLD2 | 16 | + |
| intron-exon | ANKFY1 | 17 | - | STX4 | 16 | + |
| intron-exon | GPHN | 14 | - | IPO7 | 11 | + |
| exon-exon | SMG1 | 16 | - | NPIPB4 | 16 | - |
| exon-exon | LOC107987206 | 14 | + | ND4 | MT | + |
| intron-exon | SMCHD1 | | - | PIK3C2A | | - |
| intron-exon | MAGI1 | 3 | - | MALAT1 | 11 | + |
| exon-exon | HLA-DPA1 | 6 | - | RPL15 | 3 | + |
| intron-exon | GAB3 | | - | RPS8 | 1 | + |
| exon-intron | SAA1 | 11 | + | LINC01492 | 9 | - |
| exon-exon | ZMYM1 | 1 | - | TARDBP | 1 | + |
| exon-exon | ALB | 4 | + | MALAT1 | 11 | + |
| exon-exon | B2M | 15 | + | EEF1D | 8 | - |
| exon-exon | PIK3R2 | 19 | + | ARIH1 | 15 | + |
| exon-exon | NPIPB12 | 16 | - | NPIPB11 | 16 | - |
| exon-intron | LOC101928372 | | - | AL354714.3 | | - |
| exon-intron | TMEM125 | 1 | - | WWOX | 16 | - |
| exon-intron | CDC42P6 | 4 | - | GBA3 | 4 | - |
| exon-intron | IGKV4-1 | 2 | + | IGK | 2 | + |
| exon-exon | RGL3 | 19 | + | MALAT1 | 11 | + |
| exon-exon | TAT | 16 | - | PPP2R1B | 11 | - |
| exon-exon | PSMB8-AS1 | 6 | - | PSMB8 | 6 | - |
| exon-exon | APOB | 2 | - | ALB | 4 | + |
| exon-exon | SAA1 | 11 | + | APOA2 | 1 | - |
| exon-intron | ALG9 | 11 | - | AP001781.1 | 11 | - |
| exon-exon | HSP90B1 | 12 | + | IL6ST | 5 | - |
| exon-exon | SAA2-SAA4 | 11 | - | HPR | 16 | + |
| exon-exon | SAA1 | 11 | + | ARHGEF12 | 11 | + |
| exon-intron | HP | 16 | + | GRAMD1C | 3 | - |
| exon-intron | C12orf45 | | + | ALDH1L2 | 12 | + |
| exon-intron | MUC2 | 11 | - | CHST12 | 7 | + |
| intron-exon | RPS8 | 1 | + | USP47 | 11 | + |
| exon-exon | LAP3 | 4 | + | SERPINA1 | 14 | - |
| intron-exon | NAV2 | 11 | + | C8A | 1 | + |
| exon-exon | CFI | 4 | - | PLA2G12A | 4 | - |
| intron-exon | LINC01687 | | - | MRPS6 | | + |
| intron-exon | FAM13A | 4 | - | SSB | 2 | + |
| exon-intron | CLMN | 14 | - | NUP50-DT | 22 | - |
| exon-exon | ZFP36L1 | 14 | + | FGB | 4 | + |
| exon-exon | SAA2-SAA4 | 11 | - | CCDC124 | 19 | + |
| exon-intron | IGKV3-11 | | - | IGK | 2 | - |
| exon-exon | HP | 16 | + | SLC22A3 | 6 | + |
| exon-intron | CEP63 | 3 | + | AC120045.1 | | - |
| exon-exon | HP | 16 | + | HPR | 16 | + |
| exon-exon | IGLV2-23 | 22 | + | IGLL5 | 22 | + |
| exon-exon | HLA-DRB1 | 6 | - | HLA-DRB6 | 6 | - |
| intron-exon | PAX8 | 2 | - | ND6 | MT | + |
| exon-intron | SBNO1 | 12 | - | SMG6 | 17 | + |
| exon-intron | DUSP22 | | + | TBX20 | 7 | - |
| exon-exon | ARNT | 1 | - | NELFB | 9 | + |
| exon-exon | RBMS2 | 12 | + | TFPI2 | 7 | - |
| exon-exon | PSG4 | 19 | - | PSG5 | 19 | - |
| exon-intron | GRN | 17 | + | PLEKHA5 | 12 | + |
| exon-intron | SPP1 | 4 | + | ERC1 | 12 | - |
| intron-exon | LINC01297-DUXAP10-NBEAP6 | 14 | + | HIBADH | | - |
| intron-exon | LINC02109 | | + | LVRN | | + |
| exon-intron | RBMS2 | 12 | - | ANKRD52 | 12 | - |
| exon-intron | TFPI2 | 7 | - | TSHZ2 | 20 | - |
| exon-intron | PSG1 | 19 | - | MALINC1 | 5 | + |
| exon-intron | RPS15A | 16 | - | LINC01169 | | - |
| exon-exon | PARN | 16 | - | MALAT1 | 11 | + |
| exon-exon | PRG2 | 11 | - | SERINC3 | 20 | - |
| exon-intron | LINC01949 | 5 | - | LOC101929380 | 5 | - |
| exon-intron | PSG9 | 19 | - | SPRY4-AS1 | 5 | + |
| intron-exon | KMO | 1 | + | MALAT1 | 11 | + |
| exon-intron | CGA | 6 | - | AC011473.1 | 19 | + |
| exon-intron | PSG4 | 19 | - | AC004784.1 | | - |
| exon-exon | ATP1A1 | 1 | + | TMA7 | 3 | + |
| exon-intron | TFPI2 | 7 | - | GNGT1 | | - |
| exon-intron | LITAF | 16 | - | TCF20 | 22 | + |
| exon-exon | SF3B1 | 2 | - | KIAA1191 | 5 | - |
| exon-exon | PPP1R9B | 17 | - | PPIAP22 | 21 | + |
| exon-exon | TMCO4 | 1 | - | RPS3AP6 | 15 | + |
| exon-intron | RAB5IF | 20 | + | LOC105370866 | 15 | + |
| exon-exon | MCAM | 11 | - | PLD6 | 17 | - |
| exon-intron | EIF3I | 1 | + | ZBTB8B | 1 | + |
| exon-intron | NDUFB7 | 19 | - | SPIRE2 | 16 | - |
| exon-intron | ALDOA | 16 | + | GTF2IRD2 | 7 | - |
| exon-intron | TMSB10 | 2 | + | ATP12A | 13 | + |
| exon-intron | RAD51C | 17 | + | LOC105371574 | 17 | + |
| exon-intron | RPS5 | 19 | + | CDH7 | 18 | + |
| intron-exon | SOX2-OT | 3 | + | TMSB10 | 2 | + |
| exon-intron | VDAC1 | 5 | + | VDAC1P2 | X | - |
| exon-exon | RPS6 | 9 | - | CASP8 | 2 | + |
| exon-exon | CCNB2 | 15 | + | TTC7B | 14 | + |
| exon-intron | NDUFB8 | 10 | - | CARS1 | 11 | - |
| exon-exon | ACTB | 7 | + | ACTB | 7 | - |
| exon-exon | EEF1A1P5 | 9 | + | RPS27 | 1 | + |
| exon-exon | ANAPC16 | 10 | + | TPMTP1 | 18 | + |
| exon-intron | RPL23AP42 | 3 | - | TRIM9 | 14 | + |
| exon-intron | RPL35 | 9 | - | CFAP53 | 18 | + |
| exon-intron | IFITM2 | 11 | + | LINC01726 | | + |
| exon-exon | PRELID1 | 5 | + | YWHAB | 20 | + |
| exon-exon | ENO1 | 1 | - | MAPRE1 | 20 | + |
| exon-exon | RPS20 | 8 | - | HMGB1 | 13 | - |
| exon-intron | SLC25A32 | 8 | - | ATP5MPL | 14 | - |
| exon-intron | RPL27A | 11 | + | MGA | | + |
| exon-exon | LOC107984577 | 13 | + | FAR2 | 12 | + |
| exon-exon | EIF3G | 19 | - | RPS20 | 8 | - |
| exon-intron | RPS11 | 19 | + | POLD1 | | - |
| intron-exon | DNAH3 | 16 | + | TMEM159 | | + |
| exon-exon | PITPNB | 22 | - | SMC4 | 3 | + |
| exon-intron | CHD3 | 17 | + | PLEKHA7 | 11 | - |
| intron-exon | LOC105374811 | 2 | + | GIHCG | 12 | - |
| exon-exon | RPS3 | 11 | + | PABPC1 | 8 | - |
| exon-exon | TMED9 | | + | RPS26P58 | | - |
| exon-exon | SAMD9 | 7 | - | MACROH2A1 | 5 | - |
| intron-exon | TRIM59-IFT80 | 3 | + | SMC4 | 3 | + |
| exon-exon | TMEM242 | | - | UHRF2 | 9 | + |
| exon-intron | RPL21P16 | 10 | - | HSPA4L | | - |
| intron-exon | RMDN2 | 2 | + | C3 | 19 | - |
| intron-exon | ATP11C | X | - | MALAT1 | 11 | + |
| exon-intron | HP | 16 | + | ME1 | 6 | + |
| exon-intron | ORM1 | 9 | + | ORM2 | 9 | + |
| exon-intron | SAA2-SAA4 | 11 | - | C5orf22 | | - |
| exon-exon | RNA45SN3 | 21 | + | TACC2 | 10 | + |
| exon-intron | LOC100506023 | 1 | - | TNFSF4 | 1 | - |
| exon-intron | MYH9 | 22 | - | CSF2RA | Y | - |
| exon-exon | PSG9 | 19 | - | PSG6 | 19 | - |
| exon-exon | NELFE | | - | UBE2L3 | 22 | + |
| exon-intron | ATRAID | 2 | + | LINC01684 | 21 | - |
| exon-intron | ZNF143 | | + | CCDC178 | | + |
| exon-exon | ZNF791 | 19 | + | HP1BP3 | 1 | - |
| exon-intron | NEDD9 | | - | BTBD9 | 6 | + |
| intron-exon | MAT2A | 2 | + | CYP19A1 | 15 | - |
| intron-exon | PAPPA | 9 | + | RPS24 | 10 | + |
| exon-exon | LOC102467080 | | - | HMGB1 | 13 | - |
| exon-intron | FSTL1 | 3 | - | AIDA | 1 | - |
| exon-intron | PSG2 | 19 | - | AC004784.1 | | - |
| exon-intron | CSH1 | 17 | - | HEG1 | 3 | + |
| intron-exon | MAST4 | 5 | + | SPTLC3 | 20 | + |
| exon-intron | PSG4 | 19 | - | ANKS1B | 12 | + |
| exon-intron | MRPL51 | 12 | - | ZNF414 | 19 | + |
| exon-intron | CSH1 | 17 | - | VTI1A | 10 | - |
| intron-exon | CRIM1 | 2 | + | ANKRD12 | 18 | + |
| exon-intron | FBN2 | 5 | - | LOC105370680 | | - |
| exon-intron | HNRNPU | 1 | - | PRKY | Y | + |
| intron-exon | LOC105372544 | | + | DAB2 | 5 | - |
| exon-intron | EEF1A1P6 | 7 | - | RGPD3 | 2 | - |
| exon-intron | OSBP | 11 | + | SPATS2L | 2 | + |
| exon-exon | TMEM147 | 19 | - | AKAP11 | 13 | - |
| exon-exon | EMC10 | 19 | - | TCTA | 3 | - |
| exon-intron | TRAPPC6A | 19 | - | TMEM94 | 17 | + |
| exon-exon | LOC100129358 | 22 | - | PRPF8 | 17 | - |
| exon-intron | LOC107986991 | 9 | - | LOC105376050 | | - |
| exon-intron | TXNL1 | 18 | - | POM121C | 7 | + |
| exon-exon | CHID1 | 11 | - | SEC14L6 | | - |
| exon-intron | ZNF865 | 19 | + | LOC105374191 | 3 | + |
| exon-intron | GPX1 | 3 | - | LINC00673 | 17 | + |
| exon-exon | KRT17 | 17 | - | KRT14 | 17 | - |
| exon-intron | SLC18B1 | 6 | - | PAK2 | 3 | - |
| exon-intron | TUFT1 | 1 | + | SQOR | 15 | - |
| exon-exon | RHBDD3 | 22 | - | GRB2 | 17 | + |
| exon-intron | H3-3B | 17 | - | CDC42BPA | 1 | + |
| exon-intron | RPS14 | 5 | - | LOC105373303 | X | - |
| exon-intron | LGALS3BP | 17 | - | LINC00621 | 13 | - |
| intron-exon | FP671120.1 | 21 | + | LOC105379506 | | + |
| exon-exon | KRT6A | 12 | - | KRT6B | 12 | - |
| exon-exon | KRT6A | 12 | - | KRT6C | 12 | - |
| exon-exon | KRT6A | 12 | - | KRT6B | 12 | - |
| exon-exon | KRT17 | 17 | + | KRT14 | 17 | - |
| exon-intron | IL31RA | 5 | + | UBXN7 | 3 | + |
| exon-intron | TMEM167B | 1 | - | LOC105378892 | | - |
| exon-exon | STARD10 | 11 | - | ENTR1 | 9 | - |
| exon-intron | KRT17 | 17 | - | PUDPP1 | Y | + |
| exon-intron | DHRS3 | 1 | - | CACNA1A | 19 | - |
| intron-exon | IGH | 14 | - | IGHD | 14 | - |
| exon-exon | ZNF765-ZNF761 | 19 | + | USE1 | | + |
| intron-exon | IGH | 14 | - | IGHA2 | 14 | - |
| exon-intron | HMGA1 | 6 | + | PPP1R18 | 6 | - |
| exon-exon | POLR3C | 1 | - | RNF115 | 1 | - |
| exon-exon | MRPL36P1 | | - | PCBP1-AS1 | 2 | - |
| exon-exon | COPS7B | 2 | - | COPS7B | 2 | + |
| exon-intron | RPL23AP65 | | + | SBF2 | 11 | + |
| exon-exon | PEX11B | 1 | - | DNAJC11 | 1 | - |
| exon-intron | POLR3C | 1 | - | RNF115 | 1 | - |
| exon-intron | IGHV1-69 | 14 | - | IGH | 14 | - |
| exon-intron | IGKV3-11 | | - | IGK | 2 | - |
| exon-exon | LOC105376287 | | - | WDR34 | 9 | - |
| exon-exon | IGHJ6 | 14 | - | IGHM | 14 | - |
| exon-exon | IGLL5 | 22 | + | IGLC2 | 22 | + |
| exon-intron | LGALS7 | | - | MN1 | 22 | + |
| exon-intron | TMSB4XP8 | 4 | - | CCDC30 | | - |
| exon-exon | TNRC18 | 7 | + | TNRC18 | 7 | - |
| exon-intron | RPL8 | 8 | - | LINC02869 | 1 | - |
| exon-exon | KRT17 | 17 | - | KRT14 | 17 | - |
| intron-exon | ERV3-1-ZNF117 | 7 | - | ZNF117 | 7 | - |
| exon-exon | PNLIPRP3 | 10 | + | CIRBP | 19 | + |
| exon-exon | TP63 | 3 | + | MVK | 12 | + |
| exon-intron | ACSBG1 | 15 | - | IDH3A | 15 | - |
| exon-intron | PYY2 | 17 | - | LOC105371710 | 17 | - |
| exon-exon | NOL6 | 9 | - | TMEM59L | 19 | + |
| intron-exon | CDC42SE1 | 1 | + | MLLT11 | 1 | + |
| exon-exon | PALLD | 4 | + | GASK1B | 4 | - |
| exon-exon | CDK5RAP2 | 9 | - | TMOD1 | 9 | + |
| exon-exon | THUMPD3-AS1 | 3 | - | PAQR3 | | - |
| exon-intron | LOC101928415 | X | + | PDHA1 | X | + |
| exon-exon | CCNL1 | 3 | + | LOC101928236 | 3 | + |
| exon-intron | SOCS2 | 12 | - | SOCS2-AS1 | 12 | - |
| exon-exon | UBE3A | 15 | - | LOC107985698 | | - |
| intron-exon | MAL2-AS1 | 8 | - | MAL2 | 8 | - |
| exon-exon | PCDH7 | 4 | + | MEG8 | 14 | + |
| exon-exon | MRPL19 | 2 | + | PTBP2 | 1 | + |
| exon-intron | AP2S1 | 19 | - | CHSY3 | | + |
| intron-exon | SNHG14 | 15 | + | SNAP25 | 20 | + |
| exon-intron | ATP5ME | 4 | - | GNG7 | 19 | + |
| exon-intron | LOC105375026 | 6 | + | AL138889.1 | 6 | + |
| intron-exon | CUL4A | 13 | - | PCID2 | 13 | - |
| exon-exon | LINC00339 | | + | CDC42 | 1 | + |
| intron-exon | AL139807.1 | | + | NEDD9 | 6 | + |
| exon-intron | ITGB1BP1 | 2 | - | ASAP2 | 2 | - |
| intron-exon | LOC107986356 | 5 | + | GUSBP16 | 5 | + |
| exon-exon | KLK5 | 19 | + | LOC105372442 | 19 | + |
| intron-exon | AL132857.2 | | + | ZNF318 | 6 | - |
| intron-exon | ARRDC3 | 5 | + | ARRDC3-AS1 | | + |
| intron-exon | PDGFD | | + | DDI1 | | + |
| intron-exon | AL513314.1 | 1 | - | ZBBX | 3 | - |
| exon-intron | CKS2 | | + | MPV17L | 16 | - |
| exon-intron | FGD5-AS1 | 3 | - | FGD5 | 3 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| intron-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| exon-exon | GPR89A | 1 | - | NBPF25P | 1 | - |
| exon-exon | TMED4 | 7 | - | DDX56 | | - |
| intron-exon | ADAT1 | 16 | - | TMEM231 | 16 | - |
| exon-intron | ISCA1 | 9 | - | C9orf153 | | - |
| exon-exon | ANKRD28 | 3 | - | PIP5K1C | 19 | - |
| intron-exon | LRAT | | - | FGG | 4 | - |
| exon-exon | LOC105372483 | 19 | + | ZNF117 | 7 | - |
| intron-exon | AC016590.1 | 19 | - | LOC284412 | 19 | - |
| intron-exon | BORCS7-ASMT | 10 | + | TNS4 | 17 | - |
| exon-intron | MT2A | 16 | + | ATP8B4 | 15 | + |
| exon-intron | CNOT11 | 2 | + | WDR76 | 15 | + |
| exon-exon | LOC107986567 | | - | ADTRP | | - |
| intron-exon | AC084026.2 | | + | LOC105379350 | | + |
| exon-intron | SEC14L4 | | - | LOC107985579 | | - |
| intron-exon | PSMF1 | 20 | + | AZIN1 | 8 | - |
| intron-exon | TBCD | 17 | + | GTF2H2C | 5 | + |
| exon-intron | FASN | 17 | - | AC022034.3 | | - |
| intron-exon | GPC6 | 13 | + | RBM3 | X | + |
| intron-exon | BBS5 | | + | POP5 | | - |
| exon-intron | DDX5 | 17 | - | NUP210L | 1 | + |
| intron-exon | DSP | 6 | + | CD24 | 6 | - |
| intron-exon | ERV3-1-ZNF117 | 7 | - | ZNF117 | 7 | - |
| exon-exon | CRAMP1 | | + | INAVA | | + |
| exon-intron | MPST | 22 | + | LINC00278 | | - |
| intron-exon | GATD3B | 21 | - | CAPNS1 | 19 | + |
| exon-intron | S100A2 | 1 | - | GRIK1-AS2 | | - |
| intron-exon | GUK1 | 1 | + | FADS2 | 11 | + |
| exon-intron | EIF3I | 1 | + | ZBTB8A | 1 | + |
| exon-intron | SEC14L4 | | - | LOC107985579 | | - |
| exon-exon | NOP16 | 5 | - | SH3BGRL3 | 1 | + |
| exon-exon | RPS15P4 | 2 | + | ACTG1 | 17 | + |
| exon-exon | CFL1 | 11 | + | CCDC88C | 14 | + |
| intron-exon | IGH | 14 | - | IGHA1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-18 | 14 | - |
| intron-exon | MMEL1 | 1 | - | PRXL2B | 1 | - |
| exon-intron | RPS15P4 | 2 | - | BTBD10 | 11 | + |
| exon-intron | ILF3-DT | | - | MRPL4 | 19 | - |
| exon-exon | BAX | 19 | + | HMGA1 | 6 | + |
| intron-exon | LOC102723663 | | - | RPL14 | 3 | + |
| intron-exon | IL6ST | 5 | + | EIF3D | 22 | - |
| exon-exon | RPL15P3 | 6 | + | HMGA1 | 6 | + |
| exon-intron | PDAP1 | 7 | - | LOC112267968 | 6 | + |
| exon-exon | LOC107984814 | 16 | + | DCAF6 | 1 | + |
| exon-exon | SRSF9 | 12 | - | GATC | 12 | + |
| intron-exon | PCMTD1 | 8 | - | DCDC2 | 6 | - |
| exon-exon | BAD | 11 | - | RPS2P5 | | + |
| exon-intron | LOC105370532 | 14 | + | SGPP1 | 14 | + |
| exon-intron | RRNAD1 | 1 | + | RBM47 | 4 | + |
| exon-exon | CAPNS1 | 19 | + | TPI1 | 12 | + |
| exon-exon | VIM | 10 | + | H3P6 | 2 | + |
| exon-intron | NNMT | 11 | + | FBXL13 | 7 | - |
| exon-intron | RBM38 | 20 | + | LOC102724150 | X | + |
| exon-intron | IGHJ3 | 14 | - | IGHD | 14 | - |
| exon-intron | SMG8 | | + | PTPRD | 9 | + |
| exon-intron | IGKV1-9 | 2 | - | IGK | 2 | - |
| exon-intron | RPS9 | 19 | + | BAZ1A | 14 | + |
| exon-intron | PNOC | | - | AC021678.2 | 8 | - |
| exon-intron | MAZ | 16 | + | FHIT | | + |
| exon-intron | RPS3 | 11 | + | HECTD4 | 12 | - |
| exon-intron | C19orf53 | | + | FAT3 | 11 | - |
| exon-exon | VGLL4 | 3 | - | UBE2E3 | 2 | + |
| intron-exon | IGH | 14 | - | IGHV3-15 | 14 | - |
| exon-intron | IGHD | | - | IGH | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-7 | 14 | - |
| exon-exon | CCDC142 | 2 | - | MRPL53 | 2 | - |
| exon-intron | IGHG1 | 14 | - | IGH | 14 | - |
| exon-exon | NMRK1 | | + | OSTF1 | | + |
| exon-intron | IGLC3 | 22 | + | IGL | 22 | + |
| exon-intron | IGHA1 | 14 | - | IGH | 14 | - |
| exon-intron | IGHA1 | 14 | - | IGHA2 | 14 | - |
| intron-exon | TRA | 14 | + | TRAC | 14 | + |
| intron-exon | PTPRK | 6 | - | LOC105377872 | | - |
| exon-exon | GAPDH | 12 | + | RPS17P16 | 22 | + |
| exon-intron | IGHA1 | 14 | - | IGH | 14 | - |
| exon-exon | IGKV1-39 | 2 | - | IGKV1-12 | 2 | - |
| intron-exon | CCDC171 | 9 | - | GIT2 | 12 | - |
| intron-exon | IGH | 14 | - | IGHM | 14 | - |
| exon-intron | MAP3K12 | 12 | + | LINC02055 | 8 | - |
| exon-intron | BCL7A | 12 | - | AC069503.1 | | - |
| exon-intron | NDUFS5 | 1 | + | LOC107984355 | | - |
| exon-exon | LOC105372431 | | - | NTN5 | | - |
| exon-intron | ACTG1 | 17 | - | AP001604.1 | | + |
| exon-intron | PIK3CD | 1 | + | LINC02613 | 2 | + |
| exon-intron | RUBCN | 3 | - | LOC112267867 | 14 | - |
| exon-exon | ACBD6 | 1 | - | WDR91 | 7 | - |
| exon-exon | ACAT2 | 6 | + | TCP1 | 6 | - |
| exon-exon | RAN | 12 | + | CPNE8-AS1 | | + |
| exon-exon | NIPAL3 | 1 | + | B4GALT5 | 20 | - |
| exon-exon | PDCD7 | 15 | - | CAPNS1 | 19 | + |
| exon-intron | RPL27 | 17 | + | LOC107987347 | Y | + |
| exon-exon | DHX8 | | + | HSP90AB1 | 6 | + |
| exon-exon | SMG1 | 16 | - | SLC25A18 | 22 | - |
| exon-intron | IGFBP4 | 17 | + | PLEKHG1 | 6 | + |
| exon-exon | TMSB4X | X | + | ATAD1 | 10 | - |
| intron-exon | AL603839.2 | | - | EXO5 | 1 | - |
| intron-exon | AL450306.1 | | + | DLG5 | 10 | + |
| exon-exon | LINC02436 | | + | SLC25A4 | 4 | + |
| exon-exon | ACTB | 7 | - | RPS16 | 19 | - |
| exon-exon | C15orf39 | 15 | + | RPL14 | 3 | + |
| exon-intron | FBLN1 | 22 | + | ARIH2 | 3 | - |
| exon-exon | CD44 | 11 | - | RPL13 | 16 | + |
| exon-intron | RPS16 | 19 | - | SEC14L5 | 16 | - |
| exon-intron | HNF1A | 12 | - | HNF1A-AS1 | 12 | - |
| exon-exon | LDHA | 11 | + | WIPI2 | 7 | + |
| exon-intron | HSPA4L | 4 | + | LOC100533655 | | + |
| intron-exon | PDP1 | 8 | + | APPL1 | 3 | + |
| exon-exon | PANK3 | 5 | - | SLC25A32 | 8 | - |
| exon-intron | TMEM108-AS1 | | - | TMEM108 | 3 | - |
| exon-intron | TSNAX | 1 | - | AL445524.2 | 1 | - |
| exon-intron | TMSB4XP8 | 4 | - | CCSER1 | 4 | - |
| exon-exon | BOLA2-SMG1P6 | 16 | - | SMG1P6 | 16 | - |
| intron-exon | MSH6 | 2 | - | FBXO11 | 2 | - |
| exon-exon | LOC100288203 | 15 | + | NUP160 | 11 | - |
| exon-intron | RPUSD3 | 3 | - | TTLL3 | 3 | - |
| exon-exon | TMBIM6 | 12 | - | TMBIM6 | 12 | + |
| exon-exon | MYO9B | 19 | - | NDUFV1 | 11 | + |
| exon-intron | NKAIN1 | 1 | - | TRPM7 | 15 | + |
| exon-exon | UNC13A | 19 | + | UNC13A | 19 | - |
| exon-exon | PCBP1 | 2 | - | PCBP1 | 2 | + |
| exon-exon | CNPY3 | 6 | - | CNPY3 | 6 | + |
| exon-intron | VPS4A | 16 | + | KLF12 | 13 | - |
| exon-intron | LINC00689 | | + | VIPR2 | | + |
| exon-intron | HAP1 | | - | ABCA3 | 16 | + |
| exon-intron | SH3BP5L | | - | UBE2K | 4 | - |
| exon-exon | NDRG2 | 14 | + | NDRG2 | 14 | - |
| exon-exon | PEG10 | 7 | - | PEG10 | 7 | + |
| exon-intron | E2F1 | 20 | - | LOC105370224 | | + |
| exon-exon | AP1S1 | 7 | - | AP1S1 | 7 | + |
| exon-exon | CIC | 19 | - | CIC | 19 | + |
| exon-exon | HNRNPA3 | 2 | - | HNRNPA3 | 2 | + |
| exon-exon | ULK1 | 12 | - | ULK1 | 12 | + |
| exon-intron | BAALC | 8 | + | LOC107984219 | 10 | + |
| exon-intron | SLC25A6 | Y | - | IL3RA | Y | - |
| intron-exon | LOC105371082 | 16 | - | MED17 | 11 | + |
| intron-exon | EIF4G2 | 11 | + | EIF4G2 | 11 | - |
| exon-exon | RNU6-1 | 15 | - | VPS72 | 1 | - |
| exon-exon | YWHAG | 7 | + | CYB561A3 | 11 | - |
| exon-exon | WASF2 | 1 | + | WASF2 | 1 | - |
| exon-intron | RPL13 | 16 | - | RPL13P12 | 17 | - |
| exon-exon | MARS1 | 12 | - | MARS1 | 12 | + |
| exon-exon | AKAP8L | 19 | + | AKAP8L | 19 | - |
| exon-exon | ETV5 | 3 | + | MIF | 22 | + |
| exon-exon | NELFB | 9 | - | NELFB | 9 | + |
| exon-exon | PDAP1 | 7 | - | CTDSP2 | 12 | - |
| intron-exon | AGAP2 | 12 | + | INHBE | | + |
| exon-exon | ANP32B | 9 | + | PTPN11 | 12 | + |
| exon-exon | PSME2 | 14 | + | RPS20 | 8 | - |
| exon-intron | ND5 | MT | + | ATP6 | MT | + |
| exon-exon | COX1 | MT | - | DSG3 | 18 | - |
| intron-exon | MTCO1P12 | 1 | - | COX1 | MT | + |
| exon-exon | KRT6C | 12 | + | KRT5 | 12 | + |
| exon-exon | ACTB | 7 | - | ISY1-RAB43 | 3 | - |
| exon-intron | H3P6 | 2 | + | AL163541.1 | 13 | + |
| exon-exon | COX1 | MT | + | ND2 | MT | + |
| exon-exon | TMPRSS3 | 21 | - | MYO5B | 18 | + |
| exon-exon | DDX46 | 5 | + | ND4L | MT | + |
| exon-intron | ND4 | MT | + | SP3 | 2 | - |
| intron-exon | RNR2 | MT | + | ATP6 | MT | + |
| intron-exon | RNR2 | MT | - | TPI1 | 12 | + |
| exon-exon | LEF1 | 4 | + | COX1 | MT | + |
| exon-exon | COX1 | MT | - | CYTB | MT | + |
| exon-intron | EEF1A1P5 | 9 | + | RNR2 | MT | + |
| exon-exon | KRT19 | 17 | - | KRT19 | 17 | + |
| exon-exon | COX1 | MT | - | ATP6 | MT | + |
| exon-exon | RNA45SN2 | 21 | + | GLB1L2 | 11 | - |
| exon-exon | CYTB | MT | + | RNA45SN3 | 21 | + |
| exon-exon | EEF1A1P5 | 9 | - | EEF1A1 | 6 | + |
| exon-exon | TUBA1A | 12 | - | DHRSX | X | - |
| exon-exon | ACTBP11 | 1 | + | ACTB | 7 | - |
| exon-exon | ND4 | MT | - | COX1 | MT | - |
| exon-exon | DES | 2 | - | DES | 2 | + |
| exon-intron | COX3 | MT | - | C12orf66 | 12 | + |
| exon-exon | LOC107984638 | 14 | + | ND1 | MT | + |
| exon-exon | COX1 | MT | - | COX1 | MT | + |
| exon-exon | ATP6 | MT | - | HSP90AB1 | 6 | + |
| exon-intron | ND1 | MT | - | MTND2P28 | 1 | + |
| exon-exon | CYTB | MT | - | CYTB | MT | + |
| exon-intron | ATP6 | MT | - | AKAP13 | 15 | + |
| exon-intron | RPL23A | 17 | + | AL157700.1 | X | - |
| intron-exon | AL157700.1 | X | + | RPL23A | 17 | - |
| exon-exon | ATP6 | MT | + | ATP6 | MT | - |
| intron-exon | LARP4B | 10 | + | CYTB | MT | + |
| exon-intron | ATP6 | MT | - | CDHR2 | 5 | + |
| exon-intron | COX1 | MT | + | LIPE-AS1 | 19 | + |
| exon-exon | ND1 | MT | - | ND5 | MT | - |
| exon-exon | FTL | 19 | - | LINC00963 | 9 | - |
| exon-exon | KRT6C | 12 | + | KRT6A | 12 | - |
| exon-intron | CYTB | MT | - | SLC35F3 | 1 | + |
| exon-exon | COL5A2 | 2 | - | VIM | 10 | - |
| exon-exon | COX1 | MT | - | SPARC | 5 | - |
| exon-intron | COX1 | MT | + | RP11-152D8.1 | 2 | - |
| intron-exon | LOC102724881 | 8 | - | HSPD1 | 2 | - |
| exon-exon | ABL1 | 9 | - | COX1 | MT | + |
| exon-intron | CANX | 5 | - | ND1 | MT | + |
| exon-intron | COX1 | MT | - | DCAF6 | 1 | + |
| exon-exon | ND4 | MT | - | COX1 | MT | + |
| exon-exon | ND4 | MT | + | ATP6 | MT | + |
| exon-exon | TPT1 | 13 | - | COX1 | MT | + |
| exon-intron | COX1 | MT | + | ATF7-NPFF | 12 | - |
| exon-exon | MAPK1 | 22 | - | ATP1A1 | 1 | + |
| exon-exon | HSP90AA1 | 14 | - | HSP90AA2P | 11 | + |
| exon-exon | COX1 | MT | - | COX1 | MT | + |
| exon-exon | TMEM260 | 14 | + | HSP90AA1 | 14 | + |
| exon-exon | COX1 | MT | + | COX1 | MT | - |
| intron-exon | RNR2 | MT | - | ND4 | MT | - |
| exon-intron | COX1 | MT | - | STRN3 | 14 | + |
| exon-exon | COX2 | MT | - | COX2 | MT | + |
| exon-exon | CYTB | MT | - | ND4 | MT | - |
| intron-exon | MAD1L1 | 7 | + | COX3 | MT | + |
| exon-exon | ND5 | MT | + | CYTB | MT | + |
| exon-exon | FTL | 19 | - | FTL | 19 | + |
| exon-intron | CYTB | MT | + | MTATP6P1 | 1 | + |
| exon-exon | COX1 | MT | - | LOC104968399 | 18 | - |
| exon-exon | HNRNPA2B1 | 7 | + | COX3 | MT | + |
| exon-exon | NDUFS2 | 1 | - | COX3 | MT | - |
| exon-intron | CYTB | MT | - | RBM28 | 7 | + |
| exon-exon | COX3 | MT | + | ATP8 | MT | + |
| exon-exon | COX3 | MT | + | NDUFS2 | 1 | + |
| exon-exon | ND5 | MT | + | ND5 | MT | - |
| exon-intron | UBA52 | 19 | - | IGKC | 2 | - |
| exon-exon | HSPA6 | 1 | - | KRT8 | 12 | + |
| exon-exon | COX1 | MT | + | ANP32B | 9 | + |
| exon-exon | PCCB | 3 | - | HSPA8 | 11 | + |
| exon-intron | CASP14 | 19 | + | ECT2 | 3 | + |
| exon-intron | KRT18 | 12 | - | SFXN5 | 2 | + |
| exon-exon | GPX3 | 5 | - | GPX3 | 5 | + |
| exon-exon | CLU | 8 | - | KIAA2013 | 1 | - |
| exon-exon | SS18 | 18 | - | NRAS | 1 | - |
| exon-exon | NDUFAF6 | 8 | + | PLPBP | 8 | + |
| exon-exon | CLU | 8 | + | CLU | 8 | - |
| exon-exon | TDP2 | 6 | + | TDP2 | 6 | - |
| exon-intron | ASH1L-AS1 | | + | C17orf97 | 17 | - |
| intron-exon | UQCC1 | 20 | - | ERCC1 | 19 | - |
| intron-exon | TCF25 | 16 | + | CENPBD1 | | + |
| exon-exon | DCN | 12 | + | DCN | 12 | - |
| exon-exon | RNA45SN2 | 21 | + | KLF4 | 9 | - |
| exon-intron | LOC105373785 | 2 | - | LINC01473 | 2 | - |
| exon-exon | RNA45SN3 | 21 | + | PA2G4 | 12 | + |
| exon-exon | FKTN | 9 | + | COX1 | MT | + |
| exon-exon | NEAT1 | 11 | + | ND4 | MT | + |
| exon-intron | MKNK1 | 1 | - | MKNK1-AS1 | 1 | + |
| exon-intron | STT3B | 3 | + | CCN2 | 6 | - |
| exon-intron | VSIG8 | 1 | + | LOC107985216 | | + |
| exon-exon | CCNY | 10 | - | CCNY | | + |
| exon-exon | BGN | X | + | LOC112267901 | | + |
| exon-exon | ABHD12 | 20 | - | RAD21 | 8 | - |
| exon-exon | LOC107986555 | | - | LOC102723944 | | - |
| intron-exon | RNA28SP | 21 | + | SERPINA1 | 14 | - |
| exon-exon | B2M | 15 | - | B2M | 15 | + |
| intron-exon | RNA28SP | 21 | + | MTA1 | 14 | + |
| exon-exon | RNA45SN2 | 21 | + | WASF3 | 13 | + |
| exon-exon | ACAN | 15 | - | ACAN | 15 | + |
| exon-exon | VIM-AS1 | 10 | - | VIM | 10 | + |
| exon-exon | FMOD | 1 | + | FMOD | 1 | - |
| exon-exon | TRAK1 | 3 | + | HES6 | 2 | - |
| exon-exon | RERE | 1 | + | RERE | 1 | - |
| intron-exon | LOC105376956 | 3 | + | IQSEC1 | 3 | - |
| exon-exon | PABPC1 | 8 | + | PABPC1 | 8 | - |
| exon-exon | RPL4 | 15 | - | OGFOD2 | 12 | + |
| exon-exon | SQSTM1 | 5 | - | SQSTM1 | 5 | + |
| exon-intron | ATG13 | 11 | + | RPH3A | 12 | + |
| intron-exon | TTC13 | 1 | - | HECTD4 | 12 | - |
| exon-exon | NOMO2 | 16 | + | LOC102723728 | 16 | - |
| intron-exon | TXNRD1 | 12 | + | FLOT1 | 6 | - |
| exon-intron | NOLC1 | 10 | + | TCF12 | 15 | - |
| exon-exon | TRMT2A | 22 | - | SRRM3 | 7 | + |
| exon-exon | SENP7 | 3 | + | SENP7 | 3 | - |
| exon-intron | QSOX1 | 1 | + | NUP210L | 1 | + |
| intron-exon | PLEKHA7 | 11 | + | SMPD4 | 2 | - |
| intron-exon | CAMK1G | | - | STK33 | | - |
| exon-exon | CARNS1 | 11 | - | PPP1CA | 11 | - |
| intron-exon | VIPR2 | | + | TMEM198B | 12 | + |
| exon-exon | TXNL1 | 18 | + | TXNL1 | 18 | - |
| exon-intron | FURIN | 15 | - | TNFSF12-TNFSF13 | 17 | + |
| exon-exon | MICOS10-NBL1 | 1 | + | HMGB2 | 4 | - |
| exon-exon | CLU | 8 | + | CLU | 8 | - |
| exon-intron | VIM | 10 | + | P4HA3 | 11 | - |
| exon-intron | DCN | 12 | - | AL034427.1 | | + |
| intron-exon | ZNF385A | 12 | - | GALNT15 | | + |
| exon-exon | ACSL4 | X | + | ACSL4 | X | - |
| exon-exon | CCDC97 | 19 | - | ACAN | 15 | + |
| exon-exon | LBH | 2 | + | RPL8 | 8 | - |
| exon-exon | ZNF800 | 7 | + | ZNF800 | 7 | - |
| intron-exon | LOC105377862 | | + | UQCRC2 | 16 | + |
| intron-exon | MED23 | 6 | + | NIPA2 | 15 | + |
| exon-exon | RNA45SN3 | 21 | + | PLK3 | 1 | + |
| exon-intron | RGPD8 | | + | MIPOL1 | 14 | - |
| exon-exon | SEPTIN7 | 7 | - | SEPTIN7 | 7 | + |
| exon-exon | RNA45SN2 | 21 | + | CARM1 | 19 | + |
| exon-exon | HLA-E | 6 | + | GTPBP1 | 22 | + |
| exon-intron | PIP4P2 | 8 | - | ADAM28 | 8 | + |
| exon-exon | FN1 | 2 | - | CDKN1B | 12 | + |
| intron-exon | AKAP6 | | - | CLU | 8 | - |
| exon-intron | LY75-CD302 | | - | ERG | 21 | - |
| exon-intron | VIM | 10 | + | ST8SIA6 | | + |
| exon-exon | CLU | 8 | - | KIAA1143 | 3 | - |
| intron-exon | LINC00326 | | + | COMP | | - |
| exon-exon | PDCD4 | 10 | + | GAPDH | 12 | + |
| intron-exon | SPATA6L | | + | MT2A | | + |
| exon-exon | NFE2L1 | 17 | + | EFHD1 | 2 | + |
| exon-exon | PTCH2 | 1 | + | RPL13AP5 | 10 | + |
| intron-exon | LOC105369890 | | - | CALR | 19 | + |
| exon-intron | BEST1 | 11 | + | SNIP1 | 1 | + |
| intron-exon | NR5A2 | | - | GDI2 | 10 | - |
| intron-exon | CMAHP | 6 | - | CFH | | + |
| exon-exon | FN1 | 2 | - | APOD | 3 | - |
| intron-exon | CHSY3 | | + | FAUP1 | 18 | - |
| intron-exon | SUDS3 | 12 | + | LOC100506548 | 5 | - |
| exon-exon | RNA45SN3 | 21 | + | APOD | 3 | - |
| exon-exon | EFEMP2 | 11 | - | CFL1 | 11 | - |
| exon-intron | MALAT1 | 11 | + | CEMIP | 15 | - |
| intron-exon | LIPI | 21 | - | NINJ2-AS1 | | + |
| intron-exon | IRS1 | 2 | + | HNRNPUL2-BSCL2 | 11 | - |
| exon-exon | PABPC1 | 8 | - | NR4A1 | 12 | + |
| intron-exon | AL445242.1 | | - | PSME3IP1 | 16 | - |
| intron-exon | CNTN4 | 3 | + | SYNE3 | 14 | - |
| exon-intron | DCN | 12 | - | GRIK1-AS2 | | - |
| exon-exon | SLC7A8 | 14 | - | RPL4 | 15 | - |
| intron-exon | MAPRE2 | 18 | - | SOCS3 | 17 | - |
| exon-intron | SSU72 | 1 | - | RDH10-AS1 | 8 | - |
| exon-exon | SPIN3 | X | - | RPS5 | 19 | + |
| exon-exon | CHST15 | 10 | - | PRMT5 | 14 | - |
| exon-exon | IFITM2 | 11 | - | IFITM2 | 11 | + |
| exon-exon | ITGB1 | 10 | + | ITGB1 | 10 | - |
| exon-exon | COL8A1 | 3 | - | COL8A1 | 3 | + |
| exon-exon | RPL18AP6 | | + | PPIA | 7 | + |
| exon-exon | SNX17 | 2 | - | NFKBIZ | 3 | + |
| exon-exon | TIMP2 | 17 | - | TIMP2 | 17 | + |
| exon-exon | SEPTIN7 | 7 | - | SEPTIN7 | 7 | + |
| exon-exon | TMEM242 | | + | TMEM242 | 6 | - |
| exon-exon | PNRC2 | 1 | - | ITGA11 | 15 | + |
| exon-intron | RNA45SN2 | 21 | + | LOC112268284 | 21 | - |
| exon-exon | RPS17 | 15 | + | MFGE8 | 15 | - |
| exon-exon | SPARC | 5 | - | RPL10A | 6 | - |
| exon-intron | EIF3K | 19 | + | ACTN4 | 19 | + |
| exon-exon | LOC105374746 | 5 | - | FLJ32255 | 5 | - |
| exon-intron | GARS1 | 7 | - | GARS-DT | 7 | - |
| intron-exon | TSPAN9 | 12 | + | CACYBP | 1 | - |
| exon-exon | RNA45SN1 | 21 | + | HBB | 11 | - |
| intron-exon | SETD5 | 3 | - | THUMPD3-AS1 | 3 | - |
| exon-exon | RNA45SN1 | 21 | + | SDHAP2 | 3 | + |
| exon-exon | RNA45SN2 | 21 | + | MAP1LC3B | 16 | + |
| exon-exon | EEF1A1 | 6 | - | GTF2IP4 | 7 | + |
| exon-exon | ZNF180 | 19 | + | ZNF180 | 19 | - |
| exon-intron | LOC107986583 | 6 | - | EVI5 | 1 | - |
| intron-exon | MBP | 18 | - | IL32 | 16 | - |
| intron-exon | SMURF1 | 7 | + | RTN4 | 2 | + |
| exon-exon | MAPKAPK5-AS1 | 12 | - | MAPKAPK5-AS1 | 12 | + |
| exon-intron | EMG1 | 12 | - | EMG1 | 12 | + |
| exon-exon | S100A11 | 1 | - | TAF1 | X | + |
| exon-intron | EIF4E | 4 | - | LINC02869 | 1 | - |
| exon-intron | PPIB | 15 | - | LOC100506474 | 2 | - |
| exon-exon | CDH1 | 16 | - | SIK1B | 21 | - |
| intron-exon | DGKZ | 11 | - | PCSK7 | 11 | + |
| exon-exon | COL1A1 | 17 | + | COL1A1 | 17 | - |
| exon-exon | TALAM1 | 11 | - | MLH1 | 3 | + |
| intron-exon | GRTP1 | 13 | + | DDIT4 | 10 | + |
| exon-exon | DDIT4 | 10 | - | COL3A1 | 2 | + |
| exon-intron | SF3B3 | 16 | + | SSH2 | 17 | - |
| exon-intron | AIMP1 | 4 | + | MIR570HG | 3 | - |
| intron-exon | PRR12 | 19 | - | TEPSIN | 17 | - |
| exon-exon | KRT16 | 17 | - | KRT14 | 17 | - |
| exon-exon | IFITM1 | 11 | - | KRT14 | 17 | - |
| intron-exon | RNR2 | MT | - | DOP1B | 21 | - |
| exon-exon | KRT14 | 17 | - | KRT14 | 17 | + |
| exon-exon | MICALL1 | 22 | - | MICALL1 | 22 | + |
| exon-intron | FOSL1 | 11 | - | ZNF107 | 7 | + |
| intron-exon | ATP8A2 | 13 | + | USB1 | 16 | - |
| intron-exon | CMIP | 16 | - | COX1 | MT | + |
| intron-exon | RNF169 | 11 | - | MYO18A | 17 | + |
| exon-exon | ALS2CL | 3 | + | RNA45SN1 | 21 | - |
| intron-exon | RNA18SP5 | 21 | + | RNA45SN3 | 21 | - |
| exon-intron | ND4 | MT | + | MSH2 | 2 | + |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN1 | 21 | + |
| intron-exon | FAM20C | 7 | - | ND2 | MT | + |
| exon-intron | IGLC2 | 22 | + | IGL | 22 | + |
| exon-intron | IGLC2 | 22 | - | TK2 | 16 | + |
| exon-intron | VDAC1 | 5 | + | DEPDC1B | 5 | - |
| intron-exon | EML1 | 14 | + | ND2 | MT | + |
| exon-exon | ELP5 | 17 | + | PLA2G2A | 1 | + |
| intron-exon | PCYOX1 | 2 | - | EIF3A | 10 | - |
| exon-intron | ATP6 | MT | + | IPO11 | 5 | + |
| exon-intron | CWH43 | 4 | - | DNM2 | 19 | + |
| intron-exon | ARF3 | 12 | + | ZCCHC17 | 1 | + |
| exon-exon | ACIN1 | 14 | - | ACIN1 | 14 | + |
| exon-exon | TXNP6 | 4 | - | TXN | 9 | + |
| exon-exon | EIF6 | 20 | + | EIF6 | 20 | - |
| exon-exon | BRD2 | 6 | - | SF3B2 | 11 | - |
| exon-intron | HLA-A | 6 | - | MYH9 | 22 | + |
| exon-exon | ACSS1 | 20 | - | SPTLC1 | 9 | + |
| exon-exon | C3 | 19 | - | ARFGAP2 | 11 | - |
| exon-exon | HLA-DRB1 | 6 | + | C3 | 19 | + |
| intron-exon | LOC105378938 | 1 | + | TPM2 | 9 | + |
| exon-exon | FSTL3 | 19 | + | SCARNA2 | 1 | + |
| exon-intron | DVL2 | 17 | - | SCMH1 | 1 | + |
| exon-intron | RETSAT | 2 | - | TMEM120B | 12 | + |
| exon-intron | CUL3 | 2 | + | DRAM1 | 12 | - |
| exon-exon | C3 | 19 | - | OSTC | 4 | - |
| intron-exon | AC015908.2 | 17 | - | MUC3A | 7 | + |
| exon-exon | CLCN6 | 1 | - | CLCN6 | 1 | + |
| exon-exon | DLD | 7 | - | SURF4 | 9 | + |
| exon-intron | CHST3 | 10 | + | FLNB | 3 | - |
| exon-intron | NDUFS1 | 2 | + | INPP4B | 4 | + |
| exon-exon | UGT2A3 | 4 | - | TTC30A | 2 | - |
| exon-exon | GORAB | 1 | - | DST | 6 | + |
| exon-exon | XDH | 2 | - | XDH | 2 | + |
| exon-intron | COL4A2 | 13 | + | DTX2P1-UPK3BP1-PMS2P11 | 7 | - |
| exon-exon | COX1 | MT | + | MUC12 | 7 | - |
| exon-exon | DSP | 6 | - | COX1 | MT | + |
| exon-intron | COX1 | MT | - | CUX1 | 7 | - |
| exon-intron | ZNF852 | 3 | + | DSP | 6 | + |
| exon-intron | COX3 | MT | - | LINC02257 | 1 | - |
| intron-exon | ZFHX3 | 16 | - | AHNAK | 11 | + |
| exon-intron | ROR2 | 9 | - | ANKS1A | 6 | - |
| exon-exon | NSRP1 | 17 | + | CYTB | MT | - |
| intron-exon | PLET1 | 11 | - | MUC12 | 7 | + |
| intron-exon | ENPP7P1 | 8 | + | PTMS | 12 | + |
| exon-exon | PACS1 | 11 | - | PACS1 | 11 | + |
| intron-exon | SIRPA | 20 | - | SIRPA | 20 | + |
| exon-exon | TCF3 | 19 | + | LOC102724159 | 21 | - |
| exon-exon | CTTN | 11 | + | MYC | 8 | + |
| intron-exon | FAM118A | 22 | - | SETDB1 | 1 | - |
| exon-intron | STAT6 | 12 | + | CBR4 | 4 | - |
| exon-exon | KRI1 | 19 | + | RPGR | X | + |
| exon-exon | BCAM | 19 | + | RETREG3 | 17 | + |
| exon-exon | RPL35AP21 | 9 | - | RPL35A | 3 | + |
| intron-exon | CREBRF | 5 | - | ND4 | MT | - |
| intron-exon | ATF7IP2 | 16 | + | EMP2 | 16 | + |
| exon-exon | TMEM138 | 11 | + | CBX5 | 12 | + |
| intron-exon | LOC105370538 | 14 | - | GPHN | 14 | - |
| exon-exon | BCAS3 | 17 | - | MSRB1 | 16 | - |
| exon-intron | AGO1 | 1 | - | ABCC3 | 17 | - |
| exon-exon | YY1AP1 | 1 | - | HOXA3 | 7 | - |
| exon-intron | LOC112268284 | 21 | - | FAM160A1 | 4 | - |
| exon-exon | PCNX3 | 11 | - | PPM1G | 2 | - |
| exon-intron | GRK2 | 11 | + | TMEM177 | 2 | + |
| exon-intron | MUC3A | 7 | + | TAPBPL | 12 | + |
| exon-intron | ERGIC1 | 5 | - | GMDS | 6 | + |
| exon-exon | MUC12 | 7 | - | ZNF618 | 9 | + |
| exon-exon | MUC12 | 7 | - | MUC12 | 7 | + |
| exon-exon | CDV3 | 3 | - | IMPDH1 | 7 | + |
| exon-exon | MTF1 | 1 | - | RNA45SN2 | 21 | + |
| exon-exon | TMEM259 | 19 | - | NCL | 2 | - |
| exon-exon | ASS1 | 9 | + | TNS3 | 7 | - |
| intron-exon | TMCC1 | 3 | + | DDX5 | 17 | - |
| exon-exon | SRRM2 | 16 | - | SRRM2 | 16 | + |
| intron-exon | ZNF107 | 7 | + | PDXP | 22 | - |
| exon-exon | COQ9 | 16 | - | PLEKHG1 | 6 | - |
| exon-exon | MUC5B | 11 | + | MLEC | 12 | + |
| exon-exon | FLNB | 3 | + | MUC12 | 7 | - |
| exon-intron | TPM4 | 19 | - | PROM1 | 4 | + |
| intron-exon | CACNA1C | 12 | - | CACNA1C | 12 | + |
| exon-intron | TOP1 | 20 | + | PLCG1-AS1 | 20 | - |
| exon-exon | IGLL5 | 22 | - | IGLV3-19 | 22 | - |
| intron-exon | TAOK2 | 16 | + | UBAP2L | 1 | + |
| intron-exon | MGST3 | 1 | - | TRAPPC6A | 19 | - |
| exon-exon | FBXW2 | 9 | - | FBXW2 | 9 | + |
| intron-exon | ATXN7L1 | 7 | - | LOC652276 | 16 | + |
| exon-exon | LDHA | 11 | - | ALYREF | 17 | - |
| exon-exon | MUC5B | 11 | + | PCID2 | 13 | + |
| exon-exon | SFPQ | 1 | + | KCTD20 | 6 | + |
| exon-exon | EIF3CL | 16 | - | MED24 | 17 | - |
| exon-exon | MUC3A | 7 | + | COX2 | MT | + |
| exon-exon | EIF6 | 20 | + | EIF6 | 20 | - |
| exon-intron | IGLV3-25 | 22 | + | IGL | 22 | + |
| exon-exon | NR4A1 | 12 | + | NR4A1 | 12 | - |
| intron-exon | TMCC1 | 3 | - | SMYD3 | 1 | + |
| exon-exon | RPS3 | 11 | + | SLC39A6 | 18 | - |
| exon-intron | PRR5L | 11 | + | KDM4C | 9 | + |
| exon-intron | LOC102723996 | 21 | - | CZ1P-ASNS | 7 | + |
| intron-exon | CTPS2 | X | + | ZFX | X | + |
| exon-intron | LOC100996506 | 2 | + | PM20D1 | 1 | + |
| intron-exon | GPHN | 14 | - | RNA45SN2 | 21 | + |
| exon-intron | AP1S3 | 2 | + | WDFY1 | 2 | + |
| exon-exon | STAG3L5P-PVRIG2P-PILRB | 7 | - | TMC6 | 17 | - |
| exon-intron | EEF1A1P6 | 7 | - | ERC1 | 12 | + |
| intron-exon | EPS8 | 12 | + | COL3A1 | 2 | - |
| intron-exon | DDN-AS1 | 12 | + | LAMP1 | 13 | - |
| exon-exon | LMTK3 | 19 | + | LMTK3 | 19 | - |
| exon-exon | HSP90AB1 | 6 | - | KDM4A | 1 | - |
| intron-exon | RNR2 | MT | - | SIN3A | 15 | + |
| intron-exon | SERPINE1 | 7 | + | DPH3 | 3 | - |
| exon-exon | BOLA2B | 16 | + | XRCC5 | 2 | - |
| exon-exon | GTPBP1 | 22 | + | EEF1D | 8 | + |
| exon-exon | VEGFB | 11 | + | VEGFB | 11 | - |
| exon-intron | NCL | 2 | + | LOC114004369 | 2 | + |
| intron-exon | LOC105373785 | 2 | + | SPRED2 | 2 | - |
| intron-exon | MTAP | 9 | + | ELMO2 | 20 | - |
| exon-exon | CS | 12 | - | CS | 12 | + |
| exon-exon | ALDH18A1 | 10 | + | HGSNAT | 8 | + |
| exon-exon | TFF3 | 21 | + | TFF3 | 21 | - |
| exon-intron | PPIB | 15 | - | COX6B1 | 19 | + |
| exon-exon | NUP88 | 17 | - | RPS2 | 16 | + |
| exon-exon | PKM | 15 | - | CNTROB | 17 | - |
| exon-exon | ND2 | MT | - | ADAP1 | 7 | + |
| exon-exon | RNA45SN2 | 21 | - | BLOC1S5-TXNDC5 | 6 | + |
| intron-exon | FTX | X | - | RRM1 | 11 | + |
| exon-exon | SLC25A13 | 7 | - | PABPC4 | 1 | - |
| intron-exon | AC009690.2 | 15 | + | DIDO1 | 20 | - |
| intron-exon | CDH13 | 16 | - | SLCO3A1 | 15 | - |
| intron-exon | GNB1 | 1 | + | KIF5B | 10 | - |
| intron-exon | STRBP | 9 | + | GRM8 | 7 | + |
| exon-exon | LRP5 | 11 | + | LRP5 | 11 | - |
| exon-intron | TALAM1 | 11 | - | TMC5 | 16 | - |
| exon-intron | VASH1 | 14 | - | PRKDC | 8 | + |
| exon-exon | NOL7 | 6 | + | USP22 | 17 | - |
| exon-intron | R3HDM2 | 12 | - | RNR1 | MT | + |
| intron-exon | MAP3K13 | 3 | + | RAB3B | 1 | + |
| exon-intron | SMAD3 | 15 | - | EXOC4 | 7 | + |
| exon-intron | DHRSX | Y | + | SRP54-AS1 | 14 | - |
| intron-exon | GRSF1 | 4 | + | RNA45SN2 | 21 | + |
| exon-exon | RNA45SN3 | 21 | - | FCHSD1 | 5 | - |
| exon-intron | RPLP0P2 | 11 | + | ENOSF1 | 18 | - |
| exon-exon | CDK5RAP3 | 17 | - | COX2 | MT | + |
| exon-exon | NSD3 | 8 | + | COX4I1 | 16 | + |
| exon-exon | TALAM1 | 11 | - | MALAT1 | 11 | - |
| intron-exon | JAK1 | 1 | + | N4BP1 | 16 | - |
| exon-intron | ATP6 | MT | + | TFCP2 | 12 | + |
| exon-exon | EEF1A1P6 | 7 | + | EEF1A1 | 6 | - |
| intron-exon | FARP1 | 13 | - | ZNF490 | 19 | + |
| exon-intron | ND6 | MT | - | ZNF561-AS1 | 19 | + |
| exon-intron | DNAJC22 | 12 | - | DNAJC22 | 12 | + |
| exon-exon | ARHGEF3 | 3 | - | ILVBL | 19 | + |
| exon-intron | EEF1A1P6 | 7 | + | RIBC2 | 22 | + |
| exon-exon | NEAT1 | 11 | + | TAF2 | 8 | + |
| exon-exon | RTCB | 22 | - | RTCB | 22 | + |
| exon-exon | HSPA1B | 6 | + | HSPA1B | 6 | - |
| intron-exon | TNIK | 3 | - | MYL6 | 12 | + |
| exon-intron | FOSB | 19 | - | ZNF124 | 1 | + |
| exon-exon | SRRM2 | 16 | + | MRPL15 | 8 | + |
| exon-exon | ZSWIM4 | 19 | + | MSMO1 | 4 | - |
| exon-intron | GATAD2B | 1 | - | USP7 | 16 | + |
| intron-exon | KCNAB2 | 1 | - | TOPORS | 9 | + |
| intron-exon | ACOT11 | 1 | - | SRRM2 | 16 | + |
| exon-exon | C1QTNF1 | 17 | + | C1QTNF1 | 17 | - |
| exon-exon | GNAI2 | 3 | + | GNAI2 | 3 | - |
| exon-intron | GOLGA8A | 15 | + | SAMD12 | 8 | + |
| exon-intron | JMJD8 | 16 | + | GLYR1 | 16 | + |
| exon-exon | LLGL2 | 17 | + | XRCC1 | 19 | - |
| exon-exon | RNA45SN1 | 21 | - | ATP5MC2 | 12 | + |
| exon-exon | MYH9 | 22 | + | PSME1 | 14 | - |
| exon-exon | MYADM | 19 | + | CLU | 8 | + |
| exon-intron | PLEKHA6 | 1 | - | CNOT8 | 5 | - |
| exon-exon | EEF1A1P5 | 9 | + | EEF1AKNMT | 1 | + |
| intron-exon | HDAC8 | X | - | NDUFS2 | 1 | + |
| exon-exon | EFHB | 3 | - | RAB5A | 3 | + |
| exon-exon | SPINT1 | 15 | - | CALM3 | 19 | - |
| exon-exon | ARL6IP4 | 12 | + | LIG1 | 19 | - |
| exon-exon | CDHR5 | 11 | + | SART3 | 12 | + |
| intron-exon | CAPZB | 1 | + | SPSB1 | 1 | - |
| exon-intron | CYTB | MT | - | KCNQ3 | 8 | + |
| exon-intron | TTN | 2 | - | MSI2 | 17 | + |
| exon-intron | LGALS4 | 19 | + | ARHGEF10L | 1 | - |
| exon-exon | C1orf226 | 1 | - | C1orf226 | 1 | + |
| exon-exon | RNF145 | 5 | + | CALR | 19 | - |
| exon-exon | HDGF | 1 | - | ANKRD40 | 17 | + |
| exon-intron | TALAM1 | 11 | - | COQ10B | 2 | + |
| exon-intron | USP16 | 21 | - | LOC107197952 | 7 | + |
| exon-exon | TAF1L | 9 | - | SEPTIN7 | 7 | - |
| exon-intron | CALD1 | 7 | - | BRWD1 | 21 | + |
| intron-exon | STX16-NPEPL1 | 20 | - | NBPF14 | 1 | - |
| exon-intron | HNRNPA1P48 | 16 | + | SLC39A11 | 17 | - |
| exon-intron | LGALS9 | 17 | + | LGALS9 | 17 | - |
| intron-exon | PCCA-AS1 | 13 | - | SERPINE1 | 7 | - |
| intron-exon | PRSS48 | 4 | + | CRAMP1 | 16 | - |
| exon-intron | KIF2C | 1 | + | MSI2 | 17 | + |
| exon-exon | ATRIP-TREX1 | 3 | + | ATRIP-TREX1 | 3 | - |
| exon-intron | DDX21 | 10 | + | SULF2 | 20 | - |
| exon-intron | MUC5B | 11 | + | CASZ1 | 1 | + |
| exon-intron | ADAM12 | 10 | - | RABGEF1 | 7 | + |
| exon-intron | MUC6 | 11 | + | GUSBP4 | 6 | - |
| intron-exon | RIC8B | 12 | + | CDK10 | 16 | + |
| exon-intron | ZCCHC17 | 1 | - | RUBCNL | 13 | - |
| exon-intron | PPP4R3B | 2 | - | PPP6R3 | 11 | + |
| exon-exon | PIGR | 1 | - | DNAJC5 | 20 | + |
| exon-exon | CTNND1 | 11 | - | RNA45SN1 | 21 | + |
| intron-exon | LOC100420587 | 19 | + | MUC12 | 7 | + |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN1 | 21 | + |
| exon-intron | PPIB | 15 | - | ATCAY | 19 | - |
| exon-intron | HSP90AA1 | 14 | + | RNA18SP5 | 21 | + |
| exon-exon | STAT2 | 12 | + | DGAT1 | 8 | - |
| exon-intron | TMEM198B | 12 | + | RCN3 | 19 | + |
| intron-exon | RALY | 20 | + | EXOSC3 | 9 | + |
| intron-exon | LOC100630923 | 7 | - | MALAT1 | 11 | + |
| exon-intron | RNA45SN3 | 21 | - | RNA18SP5 | 21 | - |
| exon-exon | NECTIN1 | 11 | + | PRKCD | 3 | + |
| exon-exon | NIBAN2 | 9 | - | NIBAN2 | 9 | + |
| intron-exon | EDDM13 | 19 | + | TESK1 | 9 | + |
| exon-exon | FXYD5 | 19 | + | TSKU | 11 | - |
| exon-intron | LIMS2 | 2 | + | SDHAP2 | 3 | - |
| intron-exon | ABCC1 | 16 | - | OTULINL | 5 | + |
| exon-exon | PMS2P9 | 7 | - | DTX2P1-UPK3BP1-PMS2P11 | 7 | - |
| exon-exon | TMEM259 | 19 | + | FASN | 17 | + |
| exon-intron | TECPR1 | 7 | - | FOXK1 | 7 | - |
| exon-exon | MUC2 | 11 | + | LSR | 19 | - |
| exon-exon | BATF2 | 11 | + | ACTG2 | 2 | + |
| exon-exon | GLG1 | 16 | - | ERBB3 | 12 | - |
| exon-intron | PHLDB1 | 11 | + | TEAD2 | 19 | + |
| exon-exon | MIR570HG | 3 | + | MUC20 | 3 | + |
| exon-exon | BIVM-ERCC5 | 13 | + | LINC01000 | 7 | - |
| intron-exon | RBM10 | X | - | AGPAT1 | 6 | + |
| intron-exon | HR | 8 | + | MUC20 | 3 | + |
| intron-exon | ZSCAN25 | 7 | + | LMOD1 | 1 | + |
| exon-intron | ERBB3 | 12 | - | MICAL3 | 22 | + |
| exon-intron | FOSB | 19 | + | FBRSL1 | 12 | - |
| exon-exon | COPG1 | 3 | - | ANKRD11 | 16 | + |
| exon-intron | PPIB | 15 | - | EYA2 | 20 | - |
| exon-intron | GEMIN6 | 2 | + | PCCA | 13 | + |
| exon-intron | PGGHG | 11 | - | TAPBPL | 12 | + |
| exon-intron | RNA45SN3 | 21 | - | AP2A1 | 19 | - |
| intron-exon | PDE3B | 11 | - | ADAM19 | 5 | + |
| exon-exon | RNA45SN2 | 21 | - | CLDN7 | 17 | - |
| intron-exon | RBPJ | 4 | - | FRYL | 4 | - |
| exon-intron | CPSF7 | 11 | - | LILRB2 | 19 | + |
| intron-exon | CACNA1D | 3 | - | EIF1AD | 11 | + |
| exon-intron | RNA45SN3 | 21 | - | LOC105375220 | 7 | + |
| exon-exon | IGHG1 | 14 | + | IGHG3 | 14 | + |
| intron-exon | ABLIM1 | 10 | + | AMBRA1 | 11 | - |
| exon-intron | IGKV1-33 | 2 | - | IGK | 2 | - |
| exon-exon | TTLL5 | 14 | - | NAPA | 19 | - |
| intron-exon | MYO7B | 2 | - | C8orf58 | 8 | + |
| intron-exon | ESYT2 | 7 | + | LAP3 | 4 | + |
| intron-exon | CXCR5 | 11 | + | DIPK2B | X | + |
| intron-exon | PRICKLE3 | X | + | CD74 | 5 | + |
| exon-exon | LOC107986175 | 3 | + | AFF1 | 4 | + |
| exon-exon | CLDN4 | 7 | + | MUC4 | 3 | - |
| exon-intron | TXLNA | 1 | + | LINC00910 | 17 | + |
| intron-exon | YWHAZ | 8 | + | CAMTA2 | 17 | + |
| exon-intron | TM9SF4 | 20 | - | ZFP36L1 | 14 | + |
| intron-exon | RGS3 | 9 | + | GOLM1 | 9 | + |
| exon-intron | DLG3 | X | - | LOC284454 | 19 | - |
| exon-exon | VGLL4 | 3 | - | ATG7 | 3 | + |
| exon-exon | RAP2C | X | + | RAP2C | X | - |
| intron-exon | SCFD1 | 14 | + | TRIM74 | 7 | - |
| intron-exon | WWC2 | 4 | - | SERINC3 | 20 | + |
| exon-intron | NKTR | 3 | + | RBFOX2 | 22 | + |
| exon-exon | POLE | 12 | + | ADM | 11 | + |
| exon-exon | POM121C | 7 | + | CNPPD1 | 2 | - |
| exon-exon | KRT14 | 17 | + | KRT17 | 17 | + |
| intron-exon | AP003108.2 | 11 | - | SDHAF2 | 11 | - |
| exon-exon | KRT14 | 17 | - | KRT14 | 17 | + |
| exon-exon | RNA45SN3 | 21 | - | RNA45SN1 | 21 | + |
| exon-intron | MALAT1 | 11 | + | TBC1D10A | 22 | - |
| exon-intron | CIAO1 | 2 | - | DHX34 | 19 | + |
| intron-exon | ST3GAL1 | 8 | + | COX3 | MT | + |
| exon-exon | SLC38A7 | 16 | + | ZNF853 | 7 | + |
| exon-exon | EPHA1 | 7 | - | EPHA1 | 7 | + |
| exon-intron | CARD6 | 5 | - | SPDYE21 | 7 | + |
| intron-exon | EPSTI1 | 13 | + | SAFB | 19 | + |
| exon-exon | MET | 7 | + | NEAT1 | 11 | - |
| intron-exon | CAPZA1 | 1 | + | VPS52 | 6 | - |
| exon-intron | STAG3L2 | 7 | + | TNS1 | 2 | + |
| exon-intron | UBB | 17 | + | DCST1-AS1 | 1 | - |
| intron-exon | ARAP2 | 4 | + | PACS1 | 11 | + |
| exon-exon | ARFGAP2 | 11 | + | SH3GL2 | 9 | - |
| exon-exon | TMC6 | 17 | - | CRYM | 16 | + |
| intron-exon | HNRNPD | 4 | + | TMEM67 | 8 | + |
| exon-exon | MED13L | 12 | - | GTPBP4 | 10 | - |
| intron-exon | ARHGEF10L | 1 | + | ASH1L | 1 | + |
| intron-exon | EP400 | 12 | + | TALAM1 | 11 | - |
| exon-exon | CDC42BPB | 14 | + | PKD1P5-LOC105376752 | 16 | - |
| exon-intron | PEBP1 | 12 | - | ELF1 | 13 | + |
| exon-exon | CPSF1 | 8 | + | MEF2D | 1 | + |
| exon-exon | ANXA2 | 15 | + | ANXA1 | 9 | - |
| exon-exon | GOLGA4 | 3 | + | RBM27 | 5 | - |
| exon-exon | ODF2 | 9 | - | PLAT | 8 | + |
| exon-intron | PKP1 | 1 | + | MNT | 17 | + |
| intron-exon | TMEM71 | 8 | + | PARP2 | 14 | - |
| intron-exon | SLC24A3 | 20 | + | PCMT1 | 6 | - |
| intron-exon | LOC100506076 | 2 | - | PHF14 | 7 | - |
| intron-exon | RSRP1 | 1 | + | NTRK3 | 15 | + |
| exon-exon | COX1 | MT | - | SSR4 | X | + |
| exon-intron | IGKV1-33 | 2 | - | IGK | 2 | - |
| exon-exon | AFAP1L2 | 10 | - | GPX3 | 5 | - |
| exon-intron | SERINC1 | 6 | + | TBCE | 1 | + |
| exon-exon | MYH9 | 22 | - | MYH9 | 22 | + |
| exon-intron | BCL2L11 | 2 | - | RAB3IP | 12 | - |
| exon-intron | PRKAR2A | 3 | - | MRPS5 | 2 | - |
| exon-exon | SDR39U1 | 14 | - | KHNYN | 14 | - |
| intron-exon | GTSE1 | 22 | + | GBF1 | 10 | - |
| exon-exon | TPO | 2 | + | TPO | 2 | - |
| exon-exon | ARF4 | 3 | - | ND4 | MT | - |
| exon-exon | ANKRD53 | 2 | + | COX3 | MT | - |
| exon-intron | CYP4B1 | 1 | - | NEDD4L | 18 | - |
| exon-intron | PCDH1 | 5 | - | ZNF717 | 3 | - |
| intron-exon | CAVIN2-AS1 | 2 | + | AVEN | 15 | + |
| intron-exon | FBXO7 | 22 | - | CCT8 | 21 | - |
| exon-exon | RNF128 | X | - | SDHD | 11 | + |
| intron-exon | LOC100506076 | 2 | + | SGCD | 5 | - |
| intron-exon | UTRN | 6 | - | UBE2D3 | 4 | - |
| exon-exon | GLOD4 | 17 | - | ND5 | MT | - |
| exon-intron | IGHGP | 14 | - | IGH | 14 | - |
| exon-exon | ALDOA | 16 | + | ALDOA | 16 | - |
| exon-exon | IDH3B | 20 | - | KRT17 | 17 | + |
| exon-intron | CALR | 19 | - | CRY1 | 12 | - |
| exon-exon | IGHG3 | 14 | - | IGHG1 | 14 | - |
| exon-exon | EEF1A1 | 6 | + | BDH1 | 3 | - |
| exon-exon | EIF3D | 22 | + | FAM111A | 11 | - |
| intron-exon | TSPAN11 | 12 | - | TRIM29 | 11 | - |
| exon-exon | ZC3H11A | 1 | - | LINC01001 | 11 | - |
| intron-exon | AGPAT5 | 8 | + | PHKB | 16 | - |
| exon-intron | ND4 | MT | - | SIK2 | 11 | - |
| intron-exon | LOC101929718 | 14 | - | FABP4 | 8 | - |
| exon-exon | KRT18 | 12 | - | XAB2 | 19 | - |
| exon-exon | CALR | 19 | - | UBE4B | 1 | + |
| intron-exon | FTX | X | - | RAD18 | 3 | + |
| intron-exon | IRF3 | 19 | - | NAV2 | 11 | - |
| exon-exon | TG | 8 | + | TG | 8 | - |
| intron-exon | KIAA0319L | 1 | + | GNAS | 20 | - |
| exon-intron | DNAJC3 | 13 | - | CBFA2T2 | 20 | + |
| intron-exon | HIRA | 22 | - | TG | 8 | + |
| exon-intron | PRRC2C | 1 | + | MTHFD1 | 14 | + |
| exon-exon | ND4 | MT | - | SNX21 | 20 | + |
| exon-exon | MAZ | 16 | + | DMPK | 19 | - |
| exon-exon | SHANK2 | 11 | - | RNA45SN1 | 21 | + |
| exon-exon | TPP1 | 11 | + | LOC105375431 | 7 | - |
| exon-exon | ERBB3 | 12 | - | DOCK9 | 13 | + |
| exon-exon | TCF7L1 | 2 | + | ND1 | MT | + |
| exon-exon | ZNF703 | 8 | + | DMKN | 19 | + |
| intron-exon | KIAA1109 | 4 | + | LRRC41 | 1 | + |
| exon-exon | PPP2R1A | 19 | - | NAP1L1 | 12 | - |
| exon-intron | THOC2 | X | + | MFSD14C | 9 | - |
| exon-exon | DUOX2 | 15 | + | TAB2 | 6 | - |
| intron-exon | DISP2 | 15 | + | LARP1 | 5 | - |
| exon-intron | CTNNA1 | 5 | - | DOP1A | 6 | - |
| exon-exon | IGHG1 | 14 | + | ZNF747 | 16 | - |
| exon-exon | PCBP2 | 12 | + | PLPBP | 8 | - |
| exon-exon | PINK1 | 1 | + | ND4 | MT | - |
| exon-exon | CNKSR1 | 1 | + | ND4 | MT | - |
| exon-intron | CSGALNACT1 | 8 | - | WAC-AS1 | 10 | + |
| exon-exon | KDM2A | 11 | + | COL1A1 | 17 | + |
| exon-exon | RPL7P9 | 1 | + | RPL7 | 8 | - |
| exon-exon | NOL3 | 16 | + | TG | 8 | - |
| exon-intron | LOC105375421 | 7 | + | ARPC1A | 7 | + |
| exon-exon | PSAP | 10 | - | CAPG | 2 | + |
| exon-exon | CAVIN1 | 17 | + | GSTM2 | 1 | - |
| exon-exon | LOC642502 | 17 | - | ND4 | MT | - |
| exon-exon | H6PD | 1 | + | TWIST1 | 7 | - |
| exon-exon | ACTA1 | 1 | - | SYVN1 | 11 | - |
| exon-intron | RAD21 | 8 | - | CCT6A | 7 | + |
| exon-intron | CTNND1 | 11 | + | DCTN2 | 12 | + |
| intron-exon | C11orf42 | 11 | + | KRT5 | 12 | - |
| intron-exon | NHSL2 | X | + | TG | 8 | - |
| exon-intron | ND4 | MT | - | SFMBT2 | 10 | - |
| exon-intron | CACNA1I | 22 | - | ZNF462 | 9 | + |
| exon-exon | PBX1 | 1 | - | PBX1 | 1 | + |
| exon-intron | COL5A1 | 9 | - | LOC101448202 | 9 | - |
| intron-exon | ZNF664 | 12 | - | DAB2 | 5 | - |
| exon-exon | RNA45SN3 | 21 | - | SRRM2 | 16 | - |
| exon-intron | TTC1 | 5 | + | CDC42EP3 | 2 | + |
| exon-exon | FYCO1 | 3 | + | FYCO1 | 3 | - |
| exon-intron | PSAP | 10 | - | THBS3 | 1 | - |
| exon-intron | USP40 | 2 | - | E2F5 | 8 | + |
| intron-exon | TSHR | 14 | + | GDAP1 | 8 | - |
| exon-intron | DDX17 | 22 | - | SDCBP2-AS1 | 20 | + |
| exon-intron | GNAS | 20 | + | FBXO27 | 19 | + |
| exon-exon | PSAP | 10 | - | RNF187 | 1 | - |
| exon-exon | SLC34A2 | 4 | - | SLC34A2 | 4 | + |
| exon-exon | BTN2A2 | 6 | + | MAP1LC3A | 20 | - |
| exon-exon | HLA-DMA | 6 | - | SLC20A1 | 2 | - |
| exon-exon | OGFOD1 | 16 | - | OGFOD1 | 16 | + |
| intron-exon | NUMB | 14 | - | TGOLN2 | 2 | + |
| intron-exon | PDE5A | 4 | + | ARGLU1 | 13 | - |
| exon-exon | RPL5 | 1 | + | RNA45SN2 | 21 | + |
| exon-exon | NEU1 | 6 | + | COX14 | 12 | - |
| exon-intron | ND4 | MT | + | LOC105369625 | 12 | - |
| exon-exon | CLSTN1 | 1 | - | SETD1B | 12 | + |
| intron-exon | LOC105375044 | 6 | - | PBX1 | 1 | - |
| exon-exon | RELA | 11 | - | BMERB1 | 16 | + |
| exon-exon | ND2 | MT | - | SEMA4D | 9 | + |
| intron-exon | DIS3L2 | 2 | + | DAPK2 | 15 | + |
| exon-exon | HSP90AB1 | 6 | + | ING1 | 13 | - |
| exon-exon | HSPA5 | 9 | - | CTNNA1 | 5 | - |
| intron-exon | YES1 | 18 | + | PRRC2C | 1 | + |
| exon-intron | VPS28 | 8 | - | FAM13B | 5 | - |
| exon-exon | ACTA1 | 1 | - | GAS7 | 17 | + |
| exon-exon | NBEAP1 | 15 | + | LOC497256 | 9 | + |
| exon-intron | KRT17 | 17 | - | LOC102723582 | 3 | + |
| exon-intron | PHB2 | 12 | + | SPATA13 | 13 | + |
| intron-exon | RAB11FIP3 | 16 | + | NCK1 | 3 | + |
| exon-exon | PRPF8 | 17 | + | MCAT | 22 | + |
| exon-exon | SPP1 | 4 | + | GAPDH | 12 | - |
| intron-exon | FMNL2 | 2 | + | SEC24C | 10 | + |
| exon-exon | COL12A1 | 6 | - | SF3B1 | 2 | + |
| exon-exon | IGSF9 | 1 | - | IGSF9 | 1 | + |
| intron-exon | VTI1A | 10 | - | CALR | 19 | - |
| exon-exon | IL22RA1 | 1 | - | MESD | 15 | + |
| exon-exon | MLLT10 | 10 | + | LRCH3 | 3 | + |
| intron-exon | APPL2 | 12 | - | ACTN4 | 19 | + |
| exon-intron | TGOLN2 | 2 | + | PSME2 | 14 | - |
| exon-intron | ELMO1 | 7 | - | RRM2B | 8 | - |
| exon-intron | RGS16 | 1 | + | LINC01128 | 1 | + |
| intron-exon | RAB8B | 15 | + | STK19 | 6 | - |
| intron-exon | NCK2 | 2 | + | ATP6V0D1 | 16 | - |
| intron-exon | TOX | 8 | - | FOS | 14 | - |
| exon-exon | DKC1 | X | + | RPL15 | 3 | + |
| exon-exon | TCF7L1 | 2 | - | TCF7L1 | 2 | + |
| exon-intron | CREBBP | 16 | - | CREB3L2 | 7 | + |
| intron-exon | CAMSAP3 | 19 | + | PML | 15 | - |
| intron-exon | NFE2L1 | 17 | + | PRKCSH | 19 | + |
| exon-intron | PAX8-AS1 | 2 | + | PAX8 | 2 | - |
| exon-exon | SLC3A2 | 11 | + | RCC1 | 1 | - |
| exon-exon | ZNF623 | 8 | - | ZNF623 | 8 | + |
| exon-intron | BAG6 | 6 | - | FAM53C | 5 | + |
| exon-exon | UBE2L1 | 14 | + | UBE2L1 | 14 | - |
| exon-intron | IGHGP | 14 | - | IGH | 14 | - |
| exon-exon | USF1 | 1 | + | USF1 | 1 | - |
| exon-intron | ND4 | MT | - | TRNA | MT | - |
| exon-intron | NDUFS5 | 1 | + | AC092100.1 | 7 | + |
| exon-exon | LAMP1 | 13 | + | WAS | X | - |
| exon-intron | IGHG1 | 14 | - | IGHGP | 14 | - |
| exon-intron | TMEM179B | 11 | + | DGKZ | 11 | - |
| intron-exon | ND5 | MT | + | HNRNPA1 | 12 | + |
| exon-exon | GALNT17 | 7 | - | GALNT17 | 7 | + |
| exon-exon | SYNGR2 | 17 | + | IGHG1 | 14 | + |
| exon-exon | UBB | 17 | - | PPIB | 15 | - |
| intron-exon | DAPK1 | 9 | - | TG | 8 | - |
| exon-intron | ND4 | MT | - | FAM81A | 15 | + |
| exon-exon | SDHAF1 | 19 | - | TG | 8 | - |
| exon-exon | ND4 | MT | + | ND4 | MT | - |
| exon-exon | IL7 | 8 | + | ALDH2 | 12 | - |
| exon-intron | RIN2 | 20 | + | SYT17 | 16 | - |
| exon-exon | CLU | 8 | - | FER1L4 | 20 | + |
| exon-exon | PRELP | 1 | - | RNA45SN3 | 21 | + |
| intron-exon | TG | 8 | - | CTNNB1 | 3 | + |
| intron-exon | PANX1 | 11 | - | COX1 | MT | + |
| exon-exon | HSBP1 | 16 | - | PIGT | 20 | + |
| exon-exon | UBC | 12 | - | UBC | 12 | + |
| exon-exon | KDM2A | 11 | - | LOC105372815 | 21 | + |
| intron-exon | PCED1A | 20 | - | ITPR3 | 6 | - |
| exon-exon | CLU | 8 | - | CDK9 | 9 | + |
| exon-exon | C5orf67 | 5 | - | C5orf67 | 5 | + |
| intron-exon | LOC105373021 | 22 | + | IFT27 | 22 | - |
| exon-exon | CYB561 | 17 | - | HK1 | 10 | - |
| intron-exon | EGR3 | 8 | - | UBXN11 | 1 | - |
| exon-exon | CD74 | 5 | - | SMAD3 | 15 | - |
| exon-intron | TG | 8 | - | ATXN1 | 6 | - |
| exon-intron | YY1AP1 | 1 | + | MLXIP | 12 | - |
| exon-exon | TLK2 | 17 | + | PPM1G | 2 | - |
| exon-exon | NMT2 | 10 | - | FKBP4 | 12 | + |
| exon-exon | P2RX5-TAX1BP3 | 17 | - | INO80D | 2 | - |
| exon-exon | CRY2 | 11 | + | CRY2 | 11 | - |
| intron-exon | ZBTB16 | 11 | + | COX1 | MT | + |
| exon-exon | SPINT1 | 15 | + | CYREN | 7 | - |
| exon-intron | TPO | 2 | - | LOC102723945 | 16 | - |
| exon-exon | SNX1 | 15 | + | FN1 | 2 | + |
| intron-exon | GALNT1 | 18 | + | PPIA | 7 | + |
| exon-intron | FAT4 | 4 | - | PHF2 | 9 | - |
| exon-intron | EPAS1 | 2 | - | BBIP1 | 10 | + |
| exon-exon | NEMF | 14 | + | ST3GAL1 | 8 | + |
| intron-exon | TCF7L2 | 10 | - | HNRNPK | 9 | + |
| exon-exon | PSMD5 | 9 | + | PSMD5 | 9 | - |
| exon-intron | MICOS10-NBL1 | 1 | - | PCED1A | 20 | + |
| exon-exon | NPNT | 4 | - | HNRNPA3P10 | 12 | - |
| exon-exon | TG | 8 | - | PFKP | 10 | + |
| intron-exon | CSF2RA | Y | + | ND6 | MT | + |
| exon-exon | RPL36A-HNRNPH2 | X | - | HNRNPR | 1 | + |
| exon-exon | ATP5MC2 | 12 | + | HSPA5 | 9 | + |
| intron-exon | TPK1 | 7 | - | RBFOX2 | 22 | - |
| exon-exon | RAMP2 | 17 | - | RAMP2 | 17 | + |
| exon-exon | EFTUD2 | 17 | - | S1PR2 | 19 | - |
| exon-exon | CSRNP1 | 3 | - | CSRNP1 | 3 | + |
| exon-exon | NCL | 2 | + | ASPH | 8 | + |
| intron-exon | LINC02613 | 2 | - | PITPNM1 | 11 | + |
| exon-exon | WDR33 | 2 | - | RPLP1 | 15 | - |
| exon-exon | TXNL1 | 18 | + | SOX6 | 11 | + |
| exon-intron | COMT | 22 | + | RABGEF1 | 7 | + |
| exon-intron | ACTR1A | 10 | - | ACTR1A | 10 | + |
| exon-exon | CYC1 | 8 | - | C1QB | 1 | + |
| exon-exon | TPT1 | 13 | + | TPT1 | 13 | - |
| exon-exon | CD163 | 12 | - | CD163 | 12 | + |
| intron-exon | CTC1 | 17 | + | P4HB | 17 | + |
| exon-intron | HMGA2-AS1 | 12 | - | HMGA2 | 12 | + |
| exon-exon | HSD17B8 | 6 | + | HSD17B8 | 6 | - |
| exon-exon | IGLL5 | 22 | - | IGLV3-19 | 22 | - |
| exon-exon | IGLL5 | 22 | - | IGLV3-21 | 22 | - |
| exon-exon | IGLL5 | 22 | + | IGLL5 | 22 | - |
| intron-exon | HM13 | 20 | + | S100A6 | 1 | - |
| intron-exon | EPS8L2 | 11 | - | PRR7-AS1 | 5 | - |
| exon-intron | ILF3 | 19 | + | ROR1 | 1 | + |
| exon-intron | SH3BP2 | 4 | - | SH3BP2 | 4 | + |
| intron-exon | ANO9 | 11 | - | PKM | 15 | + |
| exon-intron | UBAP2 | 9 | + | FBXL2 | 3 | + |
| intron-exon | MINK1 | 17 | + | MINK1 | 17 | - |
| exon-intron | NPLOC4 | 17 | - | MEF2D | 1 | + |
| exon-exon | SQSTM1 | 5 | - | PKM | 15 | - |
| intron-exon | NPIPB12 | 16 | - | NPIPB11 | 16 | - |
| exon-exon | LINC01061 | 4 | + | ZNF264 | 19 | - |
| exon-intron | SIK2 | 11 | + | ATXN1 | 6 | - |
| exon-exon | EIF4H | 7 | + | MYO15B | 17 | - |
| intron-exon | PPP3CA | 4 | + | NAAA | 4 | + |
| exon-intron | LOC389473 | 7 | + | STARD4-AS1 | 5 | + |
| exon-intron | ZNF426 | 19 | - | ZNF559-ZNF177 | 19 | - |
| intron-exon | BMS1P2-AGAP9 | 10 | + | GRM6 | 5 | + |
| exon-exon | TALAM1 | 11 | - | CTSZ | 20 | - |
| exon-exon | HECA | 6 | + | FMO4 | 1 | - |
| exon-exon | PLEKHG2 | 19 | - | PLEKHG2 | 19 | + |
| intron-exon | ITGAM | 16 | - | ARHGDIA | 17 | + |
| exon-intron | GORASP2 | 2 | + | TIAM2 | 6 | - |
| exon-exon | FBRS | 16 | + | IRF1 | 5 | - |
| exon-exon | HNRNPH3 | 10 | - | STAB1 | 3 | + |
| intron-exon | MCM9 | 6 | - | RNA45SN2 | 21 | + |
| exon-intron | TSC22D1 | 13 | + | BLOC1S5-TXNDC5 | 6 | + |
| exon-exon | LOC112268058 | 10 | - | VTI1A | 10 | - |
| exon-intron | EIF3B | 7 | - | POLA2 | 11 | - |
| intron-exon | CLIC6 | 21 | - | EWSR1 | 22 | + |
| exon-exon | PPT2-EGFL8 | 6 | - | PPT2-EGFL8 | 6 | + |
| intron-exon | PACSIN2 | 22 | + | PACSIN2 | 22 | - |
| exon-exon | RPS6KA2 | 6 | + | RPS6KA2 | 6 | - |
| intron-exon | CYTH1 | 17 | + | CYTH1 | 17 | - |
| exon-exon | MICOS13 | 19 | - | TRAF3IP3 | 1 | - |
| exon-exon | MKRN1 | 7 | - | DISP1 | 1 | - |
| exon-exon | SZT2 | 1 | + | SZT2-AS1 | 1 | - |
| exon-exon | RAPGEF1 | 9 | + | TMEM219 | 16 | - |
| intron-exon | PRKCH | 14 | + | IGFBP4 | 17 | + |
| intron-exon | CACNB4 | 2 | + | RNA45SN2 | 21 | + |
| exon-exon | ARFRP1 | 20 | + | ODF2 | 9 | + |
| exon-intron | LOC112268196 | 17 | + | CYTH1 | 17 | - |
| intron-exon | PACS1 | 11 | - | GUSBP4 | 6 | - |
| exon-exon | SFTPA2 | 10 | - | MMP14 | 14 | + |
| exon-exon | KPNA6 | 1 | + | KPNA6 | 1 | - |
| exon-intron | MARCKSL1 | 1 | + | BLCAP | 20 | - |
| exon-exon | OS9 | 12 | - | OS9 | 12 | + |
| exon-exon | PLA2G4F | 15 | - | NEAT1 | 11 | + |
| exon-exon | EEF1DP1 | 19 | - | EEF1D | 8 | - |
| exon-intron | HADHA | 2 | - | SHANK2 | 11 | + |
| exon-exon | ABCA7 | 19 | + | ABCA7 | 19 | - |
| exon-exon | EEF1D | 8 | + | EEF1D | 8 | - |
| exon-exon | MUC16 | 19 | + | LOC101929285 | 6 | - |
| exon-exon | RNPEP | 1 | + | LINC02084 | 3 | + |
| exon-exon | RNA45SN1 | 21 | + | CD74 | 5 | - |
| exon-exon | FLNA | X | + | FLNA | X | - |
| exon-exon | RASSF1 | 3 | - | CAPN1 | 11 | + |
| exon-exon | PLEKHG2 | 19 | + | ST6GALNAC1 | 17 | + |
| exon-exon | IGHA1 | 14 | + | IGHA1 | 14 | - |
| intron-exon | ACADVL | 17 | - | ACADVL | 17 | + |
| exon-exon | VPS26B | 11 | + | VPS26B | 11 | - |
| exon-exon | NSD1 | 5 | + | IGHA1 | 14 | + |
| exon-exon | TRIM74 | 7 | - | INPPL1 | 11 | - |
| intron-exon | MUC5B-AS1 | 11 | - | DIDO1 | 20 | + |
| exon-intron | IGLC2 | 22 | + | ADK | 10 | - |
| intron-exon | CDK10 | 16 | - | MDS2 | 1 | + |
| exon-intron | MUC5B | 11 | + | NAF1 | 4 | + |
| exon-exon | CERS5 | 12 | + | CERS5 | 12 | - |
| exon-exon | RNA45SN2 | 21 | + | HTRA3 | 4 | + |
| exon-exon | IGHG1 | 14 | - | SYT7 | 11 | - |
| exon-exon | ZFP62 | 5 | - | ZFP62 | 5 | + |
| intron-exon | RNA18SP5 | 21 | - | OIP5-AS1 | 15 | + |
| intron-exon | ATP6V1C2 | 2 | - | MDM4 | 1 | + |
| intron-exon | TSPAN9 | 12 | - | KDR | 4 | - |
| exon-exon | RNA45SN2 | 21 | - | LAMB2 | 3 | - |
| exon-intron | RNA45SN1 | 21 | - | TPM4 | 19 | + |
| exon-intron | MMP2 | 16 | - | MMP2-AS1 | 16 | - |
| intron-exon | MGLL | 3 | + | HDLBP | 2 | - |
| exon-exon | SF3B1 | 2 | + | FCER1G | 1 | + |
| intron-exon | TTC28 | 22 | - | IGHA1 | 14 | - |
| intron-exon | PSME2 | 14 | - | LOC101928451 | 7 | + |
| exon-intron | MIAT | 22 | - | COPA | 1 | + |
| intron-exon | SLC26A9 | 1 | + | CCDC130 | 19 | + |
| exon-exon | TMEM119 | 12 | + | GAK | 4 | + |
| exon-exon | IGHG2 | 14 | + | IGHG1 | 14 | + |
| intron-exon | DDX1 | 2 | - | RNA45SN1 | 21 | + |
| exon-intron | RNA45SN3 | 21 | - | PLXNC1 | 12 | + |
| exon-exon | RNA45SN3 | 21 | - | RARA | 17 | + |
| exon-intron | RNA45SN3 | 21 | - | SUZ12P1 | 17 | + |
| intron-exon | PSPC1 | 13 | + | RNA45SN1 | 21 | + |
| exon-exon | CENPBD1P1 | 19 | - | RNA45SN3 | 21 | + |
| exon-exon | CBX4 | 17 | - | KRT14 | 17 | + |
| exon-exon | PSAP | 10 | + | IDH3B | 20 | + |
| intron-exon | CROCCP3 | 1 | + | LUM | 12 | - |
| exon-exon | RNA45SN1 | 21 | + | VPS36 | 13 | + |
| intron-exon | OSBP2 | 22 | - | CIB1 | 15 | - |
| exon-exon | SCPEP1 | 17 | - | IGHG1 | 14 | - |
| exon-intron | IGKC | 2 | + | IGK | 2 | + |
| exon-intron | RAB1B | 11 | + | LINC02377 | 4 | - |
| exon-intron | IGHG3 | 14 | - | IGHGP | 14 | - |
| exon-intron | KRT5 | 12 | + | PPP6R3 | 11 | + |
| exon-exon | CLU | 8 | - | CLU | 8 | + |
| intron-exon | MRTFA | 22 | - | SH3PXD2B | 5 | + |
| exon-intron | CBX6 | 22 | - | RBFOX1 | 16 | - |
| exon-exon | CPSF1 | 8 | - | KRT6A | 12 | - |
| exon-intron | IGHA1 | 14 | + | RARA | 17 | + |
| exon-exon | CHST11 | 12 | - | CHST11 | 12 | + |
| exon-exon | PNPLA2 | 11 | - | GHITM | 10 | + |
| intron-exon | GNA12 | 7 | - | IGHG1 | 14 | + |
| exon-exon | IGHG1 | 14 | - | IGHG3 | 14 | + |
| exon-exon | CAPN2 | 1 | - | CTSB | 8 | - |
| intron-exon | RAD23B | 9 | - | NMRAL2P | 3 | + |
| exon-intron | AASS | 7 | + | CAPN2 | 1 | - |
| intron-exon | PPP3R1 | 2 | + | IGF2R | 6 | - |
| exon-exon | MST1 | 3 | - | APEH | 3 | - |
| exon-intron | ANP32B | 9 | + | ZNF865 | 19 | + |
| exon-intron | ZADH2 | 18 | - | AP2B1 | 17 | + |
| exon-intron | GATA2-AS1 | 3 | + | RAP1GAP2 | 17 | - |
| exon-intron | LOXL4 | 10 | + | LOC106694316 | 17 | + |
| intron-exon | WIPI2 | 7 | + | GMPS | 3 | + |
| intron-exon | LRIF1 | 1 | - | CD53 | 1 | + |
| exon-intron | MIB2 | 1 | - | TIAM1 | 21 | + |
| exon-exon | TOMM40P4 | 2 | - | ZNF37BP | 10 | + |
| exon-exon | NPC2 | 14 | - | NPC2 | 14 | + |
| exon-exon | ECPAS | 9 | + | ECPAS | 9 | - |
| exon-exon | YLPM1 | 14 | + | YLPM1 | 14 | - |
| intron-exon | PTAFR | 1 | + | DNAJC2 | 7 | - |
| intron-exon | OR5BA1P | 11 | + | SSRP1 | 11 | - |
| intron-exon | C1QB | 1 | - | COQ9 | 16 | + |
| exon-intron | SLC44A3 | 1 | - | PTPRF | 1 | - |
| exon-intron | CYB561D2 | 3 | - | CYB561D2 | 3 | + |
| exon-intron | MAP4 | 3 | - | EP400 | 12 | - |
| exon-intron | TM7SF3 | 12 | + | EPS15 | 1 | - |
| exon-exon | CLSPN | 1 | - | CANX | 5 | - |
| exon-exon | AMPD3 | 11 | + | RPLP1 | 15 | - |
| exon-exon | VAMP2 | 17 | - | ACTB | 7 | - |
| intron-exon | LOC102724459 | 1 | + | NEAT1 | 11 | + |
| exon-intron | CDK16 | X | - | USP9X | X | + |
| intron-exon | STX8 | 17 | + | TMEM59 | 1 | + |
| exon-intron | TM7SF3 | 12 | - | FGD4 | 12 | + |
| exon-exon | VAMP1 | 12 | - | NUDT3 | 6 | - |
| exon-intron | RASGRP4 | 19 | + | UGCG | 9 | + |
| exon-exon | ORM1 | 9 | - | TIMP2 | 17 | - |
| exon-intron | NPLOC4 | 17 | - | ANTXR2 | 4 | + |
| exon-exon | CDS2 | 20 | - | CDS2 | 20 | + |
| intron-exon | GLUD1 | 10 | - | STK17B | 2 | + |
| intron-exon | GRB10 | 7 | - | GFI1 | 1 | - |
| exon-exon | HNRNPA1P10 | 19 | + | WIPF2 | 17 | + |
| intron-exon | OBSCN | 1 | + | ATP6 | MT | + |
| intron-exon | UFD1 | 22 | + | MSN | X | - |
| exon-intron | ATE1 | 10 | - | PTPRJ | 11 | + |
| exon-intron | MAT2A | 2 | + | RRM2 | 2 | + |
| exon-intron | TPTEP2-CSNK1E | 22 | - | ITPK1 | 14 | - |
| intron-exon | AGL | 1 | - | CTBP1 | 4 | + |
| intron-exon | CCDC12 | 3 | - | S100A9 | 1 | + |
| intron-exon | INCA1 | 17 | - | KLK4 | 19 | + |
| intron-exon | RNR2 | MT | - | ANKRD28 | 3 | - |
| exon-exon | PRRC2C | 1 | + | TGOLN2 | 2 | + |
| intron-exon | MPO | 17 | + | ACSL1 | 4 | - |
| intron-exon | AL592295.3 | 1 | - | QRICH1 | 3 | - |
| exon-intron | UPF2 | 10 | - | YAF2 | 12 | + |
| exon-exon | PCIF1 | 20 | + | AMPD2 | 1 | - |
| exon-exon | GTF2H3 | 12 | + | GTF2H3 | 12 | - |
| exon-exon | RNA45SN1 | 21 | + | ZNF710 | 15 | - |
| exon-intron | SF3B2 | 11 | + | AP4B1-AS1 | 1 | + |
| exon-intron | ATP2C1 | 3 | + | OPA3 | 19 | + |
| exon-intron | TRAPPC1 | 17 | - | LINC00571 | 13 | + |
| exon-exon | HLA-A | 6 | - | HLA-A | 6 | + |
| exon-exon | GIT2 | 12 | + | UBASH3A | 21 | + |
| exon-intron | EIF3CL | 16 | - | DBNL | 7 | - |
| exon-exon | SLU7 | 5 | - | LNPEP | 5 | - |
| exon-intron | PUM2 | 2 | + | PPM1H | 12 | - |
| exon-exon | S100A8 | 1 | + | LCP2 | 5 | - |
| exon-intron | DPY19L1P1 | 7 | - | PTTG1IP | 21 | - |
| intron-exon | ZNF865 | 19 | + | AFTPH | 2 | + |
| exon-exon | LYST | 1 | - | LYST | 1 | + |
| exon-exon | HSBP1 | 16 | - | DEFA1B | 8 | + |
| exon-exon | ND1 | MT | + | HMGN1 | 21 | - |
| exon-intron | ZNF384 | 12 | - | ILK | 11 | + |
| exon-exon | GNB1 | 1 | - | GNB1 | 1 | + |
| exon-intron | P4HB | 17 | - | RNA18SP5 | 21 | + |
| exon-intron | CD24 | 6 | - | CRIM1 | 2 | + |
| exon-exon | SMG5 | 1 | - | CCDC144A | 17 | - |
| exon-exon | RNA45SN2 | 21 | - | MVP | 16 | - |
| exon-exon | FYCO1 | 3 | - | TLN1 | 9 | + |
| intron-exon | RPAIN | 17 | + | SEC14L1 | 17 | + |
| exon-exon | ACTB | 7 | - | HBG1 | 11 | + |
| exon-intron | PADI2 | 1 | - | PFDN1 | 5 | - |
| intron-exon | SAAL1 | 11 | - | ENO1 | 1 | + |
| intron-exon | RAP1A | 1 | + | YTHDC1 | 4 | - |
| intron-exon | TBC1D22A | 22 | + | PRG3 | 11 | - |
| exon-exon | HNRNPU | 1 | + | VPS39 | 15 | + |
| exon-exon | FYCO1 | 3 | - | FKBP15 | 9 | - |
| exon-intron | RNA45SN2 | 21 | + | RNA28SP | 21 | + |
| exon-intron | TNFRSF14 | 1 | + | MICAL1 | 6 | - |
| exon-exon | CAPN1 | 11 | + | CAPN1 | 11 | - |
| exon-intron | PIGR | 1 | + | LOC107987134 | 9 | - |
| intron-exon | PAG1 | 8 | - | ARIH2 | 3 | + |
| intron-exon | ABI1 | 10 | - | BIN2 | 12 | + |
| exon-exon | H3P6 | 2 | - | MAN2C1 | 15 | - |
| exon-exon | ANKRD28 | 3 | - | GTDC1 | 2 | + |
| intron-exon | CAT | 11 | - | MARK3 | 14 | + |
| exon-intron | GPI | 19 | - | ELOVL5 | 6 | - |
| exon-exon | STAT6 | 12 | - | STAT6 | 12 | + |
| exon-intron | S100A4 | 1 | + | TBXAS1 | 7 | + |
| exon-exon | CDK9 | 9 | - | CDK9 | 9 | + |
| exon-intron | CD52 | 1 | + | EIF2AK4 | 15 | - |
| exon-exon | PSTPIP2 | 18 | - | ARID4A | 14 | + |
| intron-exon | ABCC1 | 16 | - | LSP1 | 11 | - |
| exon-exon | TYK2 | 19 | + | ARRB2 | 17 | + |
| intron-exon | FOXN3 | 14 | + | AUP1 | 2 | - |
| intron-exon | SLC12A5-AS1 | 20 | - | AKAP17A | Y | - |
| exon-exon | MAP7D1 | 1 | + | RINL | 19 | - |
| intron-exon | SRPK2 | 7 | + | XAF1 | 17 | + |
| exon-intron | CTSZ | 20 | + | AOAH | 7 | + |
| exon-exon | GOLGA8N | 15 | + | TUBB | 6 | + |
| exon-exon | WDR6 | 3 | + | DEFA3 | 8 | - |
| exon-intron | DNAH1 | 3 | + | MYO5A | 15 | - |
| exon-exon | LTF | 3 | - | LTF | 3 | + |
| intron-exon | AC027801.4 | 17 | - | KAT7 | 17 | - |
| intron-exon | MAU2 | 19 | - | STAU1 | 20 | - |
| exon-exon | PNPT1 | 2 | - | PNPT1 | 2 | + |
| exon-exon | POLR3C | 1 | + | POLR3C | 1 | - |
| exon-intron | SPI1 | 11 | - | EMB | 5 | + |
| exon-intron | ND4 | MT | + | CEACAM6 | 19 | - |
| exon-exon | TATDN2 | 3 | - | TATDN2 | 3 | + |
| exon-intron | STN1 | 10 | - | ADGRD2 | 9 | - |
| exon-exon | ZNF212 | 7 | - | MYH9 | 22 | + |
| exon-exon | TRIM44 | 11 | - | TALAM1 | 11 | - |
| exon-intron | MARF1 | 16 | + | ASAP1 | 8 | + |
| intron-exon | TC2N | 14 | - | DOP1A | 6 | + |
| exon-intron | CD37 | 19 | + | TDRD3 | 13 | - |
| intron-exon | KDM2A | 11 | - | EEF1B2 | 2 | + |
| exon-exon | KMT2D | 12 | - | KMT2D | 12 | + |
| intron-exon | MYH9 | 22 | - | SLC44A4 | 6 | - |
| exon-exon | CALR | 19 | - | GAPDH | 12 | + |
| intron-exon | FOXP1 | 3 | - | PTMAP12 | 9 | - |
| exon-intron | POLDIP3 | 22 | - | ITPR2 | 12 | - |
| exon-intron | LYZ | 12 | + | KPNA4 | 3 | - |
| exon-intron | PDPR | 16 | + | AMPD3 | 11 | + |
| intron-exon | AP3B1 | 5 | + | SUZ12 | 17 | + |
| exon-intron | ABCA7 | 19 | - | ZNF317 | 19 | - |
| intron-exon | RNF213-AS1 | 17 | - | TPP1 | 11 | + |
| exon-intron | TPGS2 | 18 | - | FHOD3 | 18 | + |
| intron-exon | FOXP1 | 3 | + | MGLL | 3 | + |
| intron-exon | PHYKPL | 5 | - | MBP | 18 | - |
| exon-exon | PLP1 | X | + | APOL2 | 22 | + |
| exon-exon | COQ8B | 19 | - | COQ8B | 19 | + |
| exon-intron | CREB3L2 | 7 | - | LMO2 | 11 | + |
| exon-intron | LOC283922 | 16 | - | KLRG1 | 12 | - |
| exon-exon | RNF168 | 3 | + | SCPEP1 | 17 | - |
| exon-exon | MYH9 | 22 | - | NUCB1 | 19 | + |
| intron-exon | SMARCD2 | 17 | + | AMOTL1 | 11 | + |
| intron-exon | RAD51B | 14 | + | USP15 | 12 | - |
| exon-intron | HMGN2 | 1 | - | ENTPD7 | 10 | - |
| intron-exon | EMB | 5 | + | RFWD3 | 16 | + |
| intron-exon | HVCN1 | 12 | + | TNS1 | 2 | + |
| exon-exon | ADD1 | 4 | + | NEAT1 | 11 | - |
| exon-exon | CALM3 | 19 | + | CALM3 | 19 | - |
| intron-exon | CSF3R | 1 | - | RBM25 | 14 | - |
| exon-intron | ADCY7 | 16 | + | CHI3L1 | 1 | + |
| exon-intron | SIRPB1 | 20 | - | MFSD14C | 9 | + |
| exon-exon | PADI4 | 1 | + | PADI4 | 1 | - |
| exon-exon | GOLGA2 | 9 | + | FN3KRP | 17 | + |
| exon-exon | TPTEP2-CSNK1E | 22 | - | MOB3A | 19 | - |
| exon-exon | FBRS | 16 | + | CLCN7 | 16 | - |
| exon-exon | RAB8A | 19 | + | CRYBG1 | 6 | + |
| exon-exon | CCNDBP1 | 15 | + | AMZ2 | 17 | - |
| exon-exon | ALDH3B1 | 11 | - | OSGIN2 | 8 | + |
| exon-exon | TFCP2 | 12 | + | LTA4H | 12 | + |
| exon-intron | TEX264 | 3 | + | FAM242B | 20 | - |
| exon-exon | PHLDB2 | 3 | + | PNN | 14 | + |
| exon-exon | CORO6 | 17 | - | CORO6 | 17 | + |
| intron-exon | FOXK1 | 7 | - | RCL1 | 9 | - |
| exon-intron | TSPAN32 | 11 | + | RAB31 | 18 | - |
| exon-intron | SHROOM4 | X | + | SDHAP2 | 3 | + |
| exon-exon | ATP9A | 20 | + | ATP9A | 20 | - |
| exon-exon | ANK1 | 8 | - | ANK1 | 8 | + |
| intron-exon | PRKCB | 16 | - | BCL11A | 2 | + |
| exon-exon | RAB8A | 19 | + | WASHC2C | 10 | + |
| intron-exon | AFF1 | 4 | + | ARHGAP17 | 16 | + |
| intron-exon | LOC107133510 | 11 | + | TCEANC2 | 1 | - |
| exon-exon | FCAR | 19 | + | FCAR | 19 | - |
| exon-intron | SYNE1 | 6 | + | SYNE1-AS1 | 6 | + |
| exon-exon | TRAF2 | 9 | - | DENND1C | 19 | + |
| intron-exon | RNR1 | MT | - | RIN3 | 14 | - |
| intron-exon | PFKFB3 | 10 | + | LARP1 | 5 | + |
| intron-exon | CYBRD1 | 2 | - | NBPF10 | 1 | - |
| intron-exon | MAX | 14 | - | FGR | 1 | + |
| exon-exon | NHLRC3 | 13 | + | PROSER1 | 13 | - |
| exon-exon | JTB | 1 | - | RNA45SN3 | 21 | + |
| exon-exon | DVL3 | 3 | - | DVL3 | 3 | + |
| exon-exon | DCAF7 | 17 | + | DCAF7 | 17 | - |
| exon-exon | CD164 | 6 | - | SLC20A1 | 2 | + |
| exon-exon | CKAP2L | 2 | - | CKAP2L | 2 | + |
| intron-exon | LYST | 1 | - | NCKAP1L | 12 | + |
| intron-exon | UQCRFS1 | 19 | + | ZNF687 | 1 | - |
| exon-exon | CADM3-AS1 | 1 | - | CADM3 | 1 | - |
| exon-exon | GOLGA8A | 15 | + | CELF4 | 18 | + |
| intron-exon | ARID4B | 1 | + | TM9SF2 | 13 | - |
| intron-exon | NPEPPSP1 | 17 | - | SRSF9P1 | 21 | - |
| intron-exon | PLXNA2 | 1 | + | PRMT2 | 21 | - |
| exon-exon | ATXN2L | 16 | + | TSG101 | 11 | - |
| intron-exon | NBDY | X | + | RAC1 | 7 | - |
| intron-exon | LOC100506990 | 8 | + | DCTN1 | 2 | - |
| exon-intron | MEG3 | 14 | - | DGKZ | 11 | + |
| intron-exon | PHACTR3 | 20 | - | UBA52 | 19 | + |
| exon-exon | RALGAPA2 | 20 | + | CNTFR | 9 | + |
| exon-exon | PLEKHA6 | 1 | - | PELI3 | 11 | + |
| exon-intron | MPDZ | 9 | + | LOC112268156 | 15 | + |
| exon-exon | DYNC1H1 | 14 | - | ATP1A2 | 1 | - |
| intron-exon | MARCHF6 | 5 | - | RPL14 | 3 | + |
| exon-intron | MEG3 | 14 | - | CHKA | 11 | - |
| exon-exon | C1orf115 | 1 | + | DHX40 | 17 | + |
| exon-exon | BBX | 3 | + | BBX | 3 | - |
| exon-exon | PLK1 | 16 | - | PLK1 | 16 | + |
| exon-intron | SNAP25 | 20 | - | CREBBP | 16 | - |
| intron-exon | RYR2 | 1 | - | UBE2H | 7 | - |
| exon-intron | ARF3 | 12 | + | PKD1P1 | 16 | + |
| exon-intron | SLC22A23 | 6 | - | PSMG4 | 6 | + |
| exon-exon | RPUSD3 | 3 | + | FEM1A | 19 | - |
| intron-exon | GRIP1 | 12 | - | AFF4 | 5 | + |
| intron-exon | SNHG14 | 15 | + | LENG8 | 19 | - |
| intron-exon | NSD3 | 8 | - | TTC3 | 21 | + |
| exon-intron | ADD1 | 4 | - | SLC24A2 | 9 | + |
| intron-exon | ARAP2 | 4 | - | LOC102724289 | 3 | - |
| exon-intron | TMEM184C | 4 | - | STXBP6 | 14 | + |
| intron-exon | KAZN | 1 | - | ANKRD33B | 5 | - |
| exon-intron | COX15 | 10 | - | LOC105375321 | 7 | - |
| intron-exon | NOS1AP | 1 | + | HNRNPA2B1 | 7 | + |
| exon-exon | HIPK2 | 7 | + | HIPK2 | 7 | - |
| exon-exon | RTKN | 2 | - | TGM2 | 20 | + |
| exon-exon | PBX2 | 6 | - | TUBB4A | 19 | - |
| intron-exon | CHSY1 | 15 | + | SRCAP | 16 | - |
| exon-exon | NGRN | 15 | + | RAB1B | 11 | + |
| exon-exon | ATG2A | 11 | - | SRRM2 | 16 | - |
| intron-exon | MYT1 | 20 | - | NXF1 | 11 | + |
| intron-exon | TMEM204 | 16 | + | INS-IGF2 | 11 | - |
| exon-exon | HNRNPH1 | 5 | + | ZNF234 | 19 | + |
| intron-exon | MNAT1 | 14 | - | SEPTIN2 | 2 | + |
| intron-exon | SLC1A3 | 5 | + | RHBDD3 | 22 | - |
| exon-intron | MICALL1 | 22 | + | STAG3L5P-PVRIG2P-PILRB | 7 | + |
| intron-exon | MAN1C1 | 1 | + | THTPA | 14 | + |
| exon-exon | ND5 | MT | + | SLC26A6 | 3 | - |
| intron-exon | STARD13 | 13 | - | COL1A2 | 7 | - |
| exon-exon | RNA45SN2 | 21 | - | PTEN | 10 | + |
| intron-exon | LOC100630923 | 7 | + | ANKRD13A | 12 | + |
| intron-exon | PARN | 16 | + | ATF4 | 22 | + |
| intron-exon | MAP4 | 3 | + | KLF7 | 2 | - |
| exon-intron | ADCY5 | 3 | + | GLIS1 | 1 | + |
| exon-exon | RPL7A | 9 | - | RNA45SN3 | 21 | + |
| exon-exon | RNA45SN3 | 21 | - | COQ10B | 2 | + |
| exon-exon | RPL7A | 9 | - | RNA45SN3 | 21 | + |
| exon-intron | HERC2 | 15 | - | MINK1 | 17 | + |
| exon-exon | SERINC3 | 20 | - | RND2 | 17 | - |
| exon-exon | KREMEN1 | 22 | - | OLFM2 | 19 | - |
| exon-intron | CNP | 17 | + | KAZN | 1 | - |
| exon-exon | ZNF445 | 3 | + | CHST3 | 10 | - |
| exon-exon | ND3 | MT | - | ZCCHC2 | 18 | + |
| exon-exon | IDH3A | 15 | + | ACSBG1 | 15 | - |
| exon-exon | NR4A1 | 12 | - | NONO | X | + |
| exon-exon | INTS5 | 11 | + | HDHD5 | 22 | - |
| intron-exon | ZNF708 | 19 | - | ILF3 | 19 | + |
| exon-exon | N4BP1 | 16 | + | NFE2L2 | 2 | - |
| exon-exon | BCL2L2-PABPN1 | 14 | + | BCL2L2-PABPN1 | 14 | - |
| exon-intron | TECPR2 | 14 | + | PPHLN1 | 12 | - |
| exon-exon | IRF2 | 4 | + | MALAT1 | 11 | + |
| exon-intron | NCAM1 | 11 | - | CDK5RAP2 | 9 | - |
| intron-exon | CD44 | 11 | - | COX15 | 10 | + |
| exon-exon | BEX3 | X | + | AKAP1 | 17 | + |
| intron-exon | LOC105370906 | 15 | + | ND2 | MT | - |
| exon-intron | DENND4B | 1 | + | TPST2 | 22 | + |
| exon-exon | GCN1 | 12 | + | STAB1 | 3 | - |
| exon-intron | CPE | 4 | - | DHFR | 5 | - |
| exon-exon | LEMD2 | 6 | + | MALAT1 | 11 | + |
| exon-intron | ND4 | MT | + | NDUFB8 | 10 | - |
| intron-exon | TGFBR2 | 3 | - | INS-IGF2 | 11 | + |
| intron-exon | GPM6A | 4 | + | FBXW11 | 5 | - |
| intron-exon | LOC112268284 | 21 | - | SPSB1 | 1 | + |
| exon-exon | FLNA | X | + | CUBN | 10 | + |
| exon-intron | PRNP | 20 | + | LOC107985291 | 19 | - |
| exon-exon | SFXN3 | 10 | + | FBXL7 | 5 | - |
| exon-intron | PFN2 | 3 | + | SMN1 | 5 | + |
| exon-intron | PLEKHB1 | 11 | + | LINC01708 | 1 | - |
| exon-exon | ACTG1 | 17 | + | TADA2B | 4 | + |
| exon-exon | ZCCHC17 | 1 | - | COX3 | MT | + |
| intron-exon | ACSS1 | 20 | + | LINC02604 | 7 | - |
| intron-exon | NUP210 | 3 | + | CABLES1 | 18 | + |
| exon-exon | CCNL2 | 1 | + | QDPR | 4 | - |
| exon-exon | MAST2 | 1 | - | CSNK1G2 | 19 | - |
| intron-exon | IGH | 14 | - | MBTPS1 | 16 | + |
| exon-intron | YIPF5 | 5 | + | CALR | 19 | + |
| exon-exon | SMARCA4 | 19 | + | SMARCA4 | 19 | - |
| exon-exon | CDC5L | 6 | + | CDC5L | 6 | - |
| exon-exon | SHC3 | 9 | + | RNA45SN1 | 21 | + |
| exon-exon | ZMYND19 | 9 | + | RNA45SN1 | 21 | + |
| intron-exon | VASH1-AS1 | 14 | - | UGGT1 | 2 | + |
| exon-exon | LOC112268284 | 21 | - | SEC61A1 | 3 | + |
| intron-exon | BCAS3 | 17 | - | RNA45SN1 | 21 | + |
| exon-exon | TRIM56 | 7 | - | MAVS | 20 | + |
| exon-exon | CRYAB | 11 | + | UNKL | 16 | - |
| exon-exon | TUBGCP2 | 10 | + | TUBA1B | 12 | - |
| exon-exon | LAMB2 | 3 | + | SERPINA3 | 14 | - |
| exon-intron | SAP18 | 13 | - | USP54 | 10 | - |
| intron-exon | ARRDC5 | 19 | - | PLIN3 | 19 | - |
| exon-exon | RNA45SN2 | 21 | - | TGOLN2 | 2 | - |
| exon-intron | NOP58 | 2 | - | TMEM178B | 7 | + |
| exon-intron | NDUFS3 | 11 | - | LOC101927789 | 11 | + |
| exon-intron | G6PC3 | 17 | - | PTGER4 | 5 | - |
| exon-exon | HLA-B | 6 | + | SBK1 | 16 | + |
| exon-intron | LINC01184 | 5 | - | COX3 | MT | - |
| exon-exon | RNA45SN2 | 21 | - | CTSB | 8 | - |
| exon-exon | VCP | 9 | + | LGALS3BP | 17 | - |
| exon-exon | RANGAP1 | 22 | - | BORCS5 | 12 | + |
| exon-intron | MAGI3 | 1 | - | ZNF548 | 19 | + |
| intron-exon | ALDH3A2 | 17 | + | OGDH | 7 | + |
| exon-exon | NCL | 2 | + | PLXNB1 | 3 | + |
| intron-exon | ZNF701 | 19 | - | NECAB3 | 20 | - |
| intron-exon | LOC106029312 | 7 | + | STAG3L2 | 7 | + |
| exon-exon | CELF4 | 18 | - | FRS2 | 12 | + |
| intron-exon | DNAJC1 | 10 | + | PPP6R3 | 11 | + |
| intron-exon | WWOX | 16 | + | PKP4 | 2 | + |
| intron-exon | ULK4 | 3 | + | CCNB1 | 5 | - |
| exon-exon | ITSN2 | 2 | + | RPL21P97 | 11 | + |
| exon-intron | LOC112268284 | 21 | - | MYL6B | 12 | - |
| exon-intron | PKM | 15 | + | RBSN | 3 | - |
| exon-exon | MSC | 8 | - | CA2 | 8 | + |
| exon-exon | NAE1 | 16 | - | NAE1 | 16 | + |
| exon-exon | NES | 1 | + | NES | 1 | - |
| exon-intron | HLA-C | 6 | - | L2HGDH | 14 | - |
| exon-intron | SPHK2 | 19 | + | SPTBN4 | 19 | + |
| intron-exon | EPS15L1 | 19 | - | CTSD | 11 | + |
| intron-exon | WIPF2 | 17 | - | DSP | 6 | + |
| exon-intron | RBMX | X | + | LRRC41 | 1 | + |
| intron-exon | ABCC4 | 13 | - | MSN | X | + |
| intron-exon | KIRREL1 | 1 | - | ADO | 10 | + |
| exon-exon | NUPR1 | 16 | + | GNA11 | 19 | - |
| exon-intron | GM2A | 5 | + | MRC2 | 17 | - |
| exon-intron | RHOG | 11 | - | PGAP2 | 11 | - |
| exon-intron | SF3B6 | 2 | - | LINC01894 | 18 | + |
| exon-exon | RPL37 | 5 | - | PDIA5 | 3 | - |
| exon-intron | EHMT2 | 6 | - | ARHGAP22 | 10 | + |
| exon-exon | RNA45SN3 | 21 | + | H19 | 11 | - |
| intron-exon | IPP | 1 | + | SHLD2P2 | 14 | + |
| intron-exon | SPIN1 | 9 | - | RNF6 | 13 | - |
| intron-exon | KCND3 | 1 | + | NPIPB3 | 16 | - |
| exon-exon | LOC100419583 | 15 | + | PDZRN3 | 3 | + |
| exon-intron | SCNN1A | 12 | - | IGL | 22 | + |
| exon-intron | STAT2 | 12 | - | LOC105376360 | 10 | + |
| exon-intron | RSRP1 | 1 | - | SLC9A8 | 20 | + |
| exon-exon | PLCG1 | 20 | - | PLCG1 | 20 | + |
| exon-intron | FBH1 | 10 | + | PPP6R3 | 11 | + |
| exon-exon | ARMCX2 | X | + | ARMCX2 | X | - |
| exon-intron | LAMP1 | 13 | - | PSD | 10 | - |
| exon-intron | IWS1 | 2 | + | WWP2 | 16 | + |
| intron-exon | HIRA | 22 | + | ACOT11 | 1 | - |
| exon-exon | TPM2 | 9 | - | EVPL | 17 | - |
| exon-exon | CTTNBP2NL | 1 | + | HSP90AB1 | 6 | + |
| exon-exon | CIZ1 | 9 | + | MANBAL | 20 | - |
| exon-intron | DAPK3 | 19 | + | NFATC1 | 18 | - |
| exon-exon | PRRC2B | 9 | - | PRRC2B | 9 | + |
| exon-exon | FAM193B | 5 | + | FAM193B | 5 | - |
| intron-exon | ARHGAP26 | 5 | - | OGFOD3 | 17 | - |
| intron-exon | FOS | 14 | + | SPTBN1 | 2 | + |
| exon-exon | BTN2A2 | 6 | - | ITPR3 | 6 | - |
| exon-exon | GJA1 | 6 | - | ASH2L | 8 | + |
| exon-intron | PLOD3 | 7 | - | MICA | 6 | - |
| intron-exon | IZUMO1 | 19 | + | MYADM | 19 | - |
| exon-intron | HLA-A | 6 | - | ZMYND11 | 10 | - |
| exon-exon | RNA45SN1 | 21 | - | EGR1 | 5 | + |
| exon-intron | GTF2IRD2B | 7 | - | CA5BP1-CA5B | X | + |
| exon-intron | ERGIC1 | 5 | - | MAU2 | 19 | + |
| intron-exon | WWP2 | 16 | - | SBDSP1 | 7 | + |
| exon-exon | CRTAP | 3 | + | LENG8 | 19 | - |
| intron-exon | THBS1 | 15 | + | PRPF8 | 17 | - |
| exon-exon | CD248 | 11 | - | PPP1R7 | 2 | - |
| exon-exon | ISCA1 | 9 | - | ISCA1 | 9 | + |
| exon-exon | YWHAE | 17 | - | SFPQ | 1 | + |
| exon-exon | RNA45SN2 | 21 | - | TP53INP2 | 20 | + |
| exon-exon | MACROH2A2 | 10 | + | MYH11 | 16 | - |
| exon-intron | ND5 | MT | - | OPA3 | 19 | - |
| exon-exon | PKD1P5-LOC105376752 | 16 | + | ND2 | MT | - |
| exon-exon | ABR | 17 | + | ABR | 17 | - |
| intron-exon | MIR205HG | 1 | - | KLK3 | 19 | + |
| exon-exon | MYH7 | 14 | - | WASHC1 | 9 | - |
| intron-exon | SORCS2 | 4 | - | LRP1 | 12 | + |
| exon-intron | RERGL | 12 | - | ZG16B | 16 | + |
| exon-exon | TGFB1I1 | 16 | - | RNA45SN1 | 21 | + |
| intron-exon | LOC105377086 | 3 | - | PTPRS | 19 | - |
| exon-exon | DCAF10 | 9 | - | COX3 | MT | - |
| intron-exon | ZNF692 | 1 | - | LRP1 | 12 | + |
| exon-exon | TSC22D1 | 13 | + | ALDOA | 16 | - |
| exon-exon | RNA45SN2 | 21 | - | ACTG2 | 2 | + |
| exon-exon | TTLL3 | 3 | - | INTS1 | 7 | + |
| exon-exon | EPG5 | 18 | - | DGKG | 3 | - |
| exon-intron | FBRS | 16 | - | KLK3 | 19 | + |
| exon-exon | RNA45SN1 | 21 | - | RNA45SN2 | 21 | - |
| intron-exon | GALNT11 | 7 | - | KLK3 | 19 | + |
| exon-intron | TEX10 | 9 | - | TEX10 | 9 | + |
| exon-intron | SELENBP1 | 1 | - | LHPP | 10 | + |
| exon-intron | ISL1 | 5 | + | PFKFB3 | 10 | - |
| exon-exon | HSPA1B | 6 | + | GIT2 | 12 | + |
| exon-exon | RPS4Y1 | Y | + | ARGLU1 | 13 | + |
| intron-exon | HERC2P9 | 15 | + | HERC2P2 | 15 | + |
| exon-intron | EPCAM | 2 | + | KLHDC4 | 16 | + |
| exon-exon | CCDC162P | 6 | - | EIF2AK1 | 7 | + |
| intron-exon | USP54 | 10 | + | ACP1 | 2 | - |
| exon-exon | MUC5AC | 11 | - | TRIM69 | 15 | - |
| exon-exon | SPTBN1 | 2 | - | NADSYN1 | 11 | + |
| exon-intron | CDC42BPG | 11 | - | ARRB1 | 11 | - |
| exon-exon | RPS4X | X | - | ATP6 | MT | + |
| exon-exon | EIF3FP3 | 2 | - | MRPS11 | 15 | - |
| intron-exon | TAFA2 | 12 | + | SUMO2 | 17 | - |
| intron-exon | SUZ12P1 | 17 | - | VEGFA | 6 | + |
| exon-exon | RAD21 | 8 | + | RAD21 | 8 | - |
| intron-exon | PCSK2 | 20 | - | NINL | 20 | - |
| exon-exon | CCT6A | 7 | - | TUBA1A | 12 | + |
| exon-exon | TMPO | 12 | - | ARPC1A | 7 | + |
| intron-exon | MAP3K13 | 3 | + | RPL4 | 15 | - |
| intron-exon | SOD2 | 6 | - | WTAP | 6 | + |
| intron-exon | ARV1 | 1 | - | AGFG1 | 2 | + |
| exon-exon | TMPO | 12 | - | ARPC1A | 7 | + |
| intron-exon | DNMBP | 10 | - | PAPPA2 | 1 | + |
| exon-exon | ATP6 | MT | - | CPM | 12 | + |
| exon-intron | ATP6 | MT | - | MAML2 | 11 | - |
| exon-exon | EIF4A2 | 3 | - | RPL6 | 12 | - |
| exon-exon | APPL2 | 12 | + | CSH2 | 17 | - |
| exon-intron | CSH2 | 17 | + | WWOX | 16 | + |
| exon-exon | CALR | 19 | - | TACC2 | 10 | - |
| exon-exon | NAXD | 13 | - | CREBBP | 16 | - |
| exon-intron | POLR2J | 7 | - | STARD13 | 13 | - |
| exon-exon | BAZ2A | 12 | + | CKAP5 | 11 | - |
| exon-exon | MBD1 | 18 | + | ARGLU1 | 13 | + |
| intron-exon | ADAM12 | 10 | + | ACIN1 | 14 | + |
| intron-exon | CROCC | 1 | + | LOC107984330 | 11 | - |
| exon-exon | MAU2 | 19 | - | ATP6V0E1 | 5 | + |
| exon-intron | SCN9A | 2 | + | LAMA3 | 18 | - |
| exon-exon | GOLGA2 | 9 | - | PPM1N | 19 | + |
| exon-intron | UBE2M | 19 | - | SSH2 | 17 | + |
| exon-intron | ETS1 | 11 | - | SEMA6A | 5 | + |
| exon-exon | AGO4 | 1 | + | FN1 | 2 | + |
| exon-exon | TMEM120A | 7 | + | STYXL1 | 7 | + |
| intron-exon | TRIM25 | 17 | - | HYOU1 | 11 | + |
| exon-intron | PSG5 | 19 | - | LOC101929380 | 5 | + |
| exon-intron | PSG2 | 19 | + | PSG9 | 19 | + |
| exon-exon | MYO7A | 11 | - | MYO7A | 11 | + |
| exon-intron | EZR | 6 | - | DAAM2 | 6 | - |
| intron-exon | LOC105369309 | 11 | - | PHF13 | 1 | - |
| exon-exon | HDLBP | 2 | + | HDLBP | 2 | - |
| intron-exon | CASC8 | 8 | - | SRRM1P1 | 8 | - |
| exon-exon | SIK3 | 11 | + | SIK3 | 11 | - |
| intron-exon | PACSIN2 | 22 | - | SIN3B | 19 | - |
| exon-exon | HUWE1 | X | - | PLXNA2 | 1 | + |
| exon-intron | FNDC3B | 3 | + | LOC154761 | 7 | - |
| exon-exon | FAM107B | 10 | - | SUPT16HP1 | 12 | + |
| exon-exon | DES | 2 | - | WIZ | 19 | - |
| exon-exon | CSF1R | 5 | - | UFC1 | 1 | - |
| exon-exon | ND5 | MT | - | TPM1 | 15 | + |
| exon-exon | ND5 | MT | - | TPM1 | 15 | + |
| intron-exon | TIMP2 | 17 | + | NEAT1 | 11 | - |
| exon-intron | TGM2 | 20 | - | NRP2 | 2 | + |
| exon-exon | ND5 | MT | - | TPM1 | 15 | + |
| exon-exon | PDGFRB | 5 | + | KPNA6 | 1 | - |
| exon-exon | PPP1R21 | 2 | + | TFPI2 | 7 | + |
| exon-exon | FN1 | 2 | - | KDELR2 | 7 | + |
| exon-intron | CSF1R | 5 | + | RCOR1 | 14 | + |
| exon-exon | SMARCB1 | 22 | + | TTC3 | 21 | - |
| exon-exon | MED15 | 22 | - | MED15 | 22 | + |
| exon-exon | GNAI2 | 3 | + | GNAI2 | 3 | - |
| intron-exon | OPRL1 | 20 | + | RUSC1 | 1 | + |
| exon-intron | ACTG1 | 17 | - | MEIS3 | 19 | - |
| exon-exon | RPN2 | 20 | - | RPN2 | 20 | + |
| exon-exon | SUGP2 | 19 | + | SUGP2 | 19 | - |
| exon-exon | GUK1 | 1 | - | SMARCC1 | 3 | - |
| intron-exon | ELMO1 | 7 | + | ADAM12 | 10 | - |
| intron-exon | ABTB2 | 11 | + | TMEM54 | 1 | + |
| exon-exon | TNKS1BP1 | 11 | + | LOC100506358 | 14 | - |
| intron-exon | RNA28SP | 21 | + | RNA45SN2 | 21 | - |
| intron-exon | BANP | 16 | + | B4GALT1 | 9 | + |
| exon-intron | TRIOBP | 22 | - | TNS2 | 12 | + |
| exon-exon | IGFBP4 | 17 | + | INS-IGF2 | 11 | - |
| intron-exon | ERI3 | 1 | - | YIPF3 | 6 | + |
| exon-exon | SCARB1 | 12 | + | MYOF | 10 | - |
| exon-intron | GK5 | 3 | + | RASAL2 | 1 | - |
| exon-exon | RNF103-CHMP3 | 2 | - | RNF103-CHMP3 | 2 | + |
| exon-intron | ABCF3 | 3 | + | FAM99A | 11 | - |
| intron-exon | RNA28SP | 21 | - | UQCRH | 1 | + |
| exon-intron | PAPPA-AS1 | 9 | - | EPAS1 | 2 | - |
| intron-exon | PTPRG | 3 | - | ZNF236 | 18 | + |
| exon-exon | CSH2 | 17 | + | CSH1 | 17 | - |
| exon-intron | WWP2 | 16 | + | LOC400541 | 16 | + |
| exon-exon | NEAT1 | 11 | + | RWDD1 | 6 | - |
| intron-exon | NDRG2 | 14 | - | TRAF4 | 17 | - |
| exon-exon | CSH2 | 17 | + | CSHL1 | 17 | - |
| exon-exon | SEC31A | 4 | - | LRCH4 | 7 | - |
| exon-exon | CSH2 | 17 | + | CSH1 | 17 | - |
| exon-exon | ZNF592 | 15 | + | KSR1 | 17 | + |
| intron-exon | PSG6 | 19 | - | CCDC125 | 5 | - |
| exon-intron | BMP7 | 20 | - | FLCN | 17 | - |
| intron-exon | SRGAP2 | 1 | - | WRN | 8 | - |
| exon-exon | CYTB | MT | - | FN1 | 2 | + |
| exon-intron | IGFBP5 | 2 | - | RALGAPA2 | 20 | - |
| exon-intron | RCC2 | 1 | + | TIAM1 | 21 | - |
| intron-exon | KISS1 | 1 | + | PSEN1 | 14 | - |
| intron-exon | GRB7 | 17 | + | SIN3A | 15 | - |
| intron-exon | ARVCF | 22 | - | MAP7D1 | 1 | + |
| exon-intron | BLOC1S5-TXNDC5 | 6 | - | MRPL23 | 11 | + |
| exon-exon | CEP250-AS1 | 20 | - | CEP250 | 20 | - |
| intron-exon | PLEKHA6 | 1 | + | CYP19A1 | 15 | - |
| intron-exon | FMN1 | 15 | + | RNA45SN1 | 21 | + |
| exon-intron | RPRD1B | 20 | - | NOL3 | 16 | - |
| exon-exon | CEBPD | 8 | + | CEBPD | 8 | - |
| intron-exon | SBF2 | 11 | - | YLPM1 | 14 | + |
| exon-intron | ANKRD13D | 11 | - | ANKRD13D | 11 | + |
| exon-intron | EPAS1 | 2 | - | SLC43A2 | 17 | - |
| intron-exon | PLA2G5 | 1 | - | ERVV-2 | 19 | - |
| exon-exon | CSH1 | 17 | + | CSH2 | 17 | - |
| exon-exon | GDF15 | 19 | + | ARID4B | 1 | + |
| exon-exon | SNRNP70 | 19 | - | SNRNP70 | 19 | + |
| exon-exon | UBE2D3 | 4 | - | SHTN1 | 10 | - |
| exon-exon | PXDN | 2 | - | NEAT1 | 11 | - |
| exon-exon | ACTB | 7 | - | DDTL | 22 | + |
| exon-exon | AOPEP | 9 | + | LSS | 21 | + |
| exon-intron | MRTFB | 16 | + | PPP6R3 | 11 | + |
| exon-exon | PGAP6 | 16 | - | GPX4 | 19 | - |
| exon-intron | ABHD12 | 20 | + | MEG3 | 14 | + |
| intron-exon | VPS8 | 3 | + | CAPN2 | 1 | + |
| exon-intron | PPP1R13L | 19 | + | VGLL3 | 3 | + |
| intron-exon | PRKCZ | 1 | + | CSH2 | 17 | + |
| exon-exon | PKD1P1 | 16 | + | EHD2 | 19 | + |
| exon-exon | TRIM29 | 11 | + | SDC1 | 2 | + |
| exon-intron | LUC7L | 16 | + | LOC102723930 | 16 | + |
| exon-intron | ACOX3 | 4 | + | CDH23 | 10 | + |
| exon-exon | PSG2 | 19 | + | PSG2 | 19 | - |
| exon-intron | COPB2 | 3 | + | TFB2M | 1 | - |
| exon-exon | TLK1 | 2 | + | NGRN | 15 | + |
| exon-intron | RNA45SN2 | 21 | - | LOC105378737 | 1 | - |
| exon-exon | NGRN | 15 | - | ANK3 | 10 | - |
| intron-exon | RC3H2 | 9 | + | MALAT1 | 11 | + |
| exon-exon | RNA45SN2 | 21 | - | GFPT1 | 2 | - |
| intron-exon | ADAM12 | 10 | + | SIPA1L1 | 14 | + |
| exon-intron | SFPQ | 1 | - | RAD54L2 | 3 | + |
| exon-exon | F13A1 | 6 | - | MINDY2 | 15 | - |
| intron-exon | PSG9 | 19 | + | PLIN2 | 9 | + |
| exon-exon | AGO2 | 8 | + | PPP2CA | 5 | - |
| exon-intron | FN1 | 2 | + | OPHN1 | X | - |
| intron-exon | MAP7 | 6 | + | RNA45SN2 | 21 | + |
| exon-exon | MVP | 16 | - | MVP | 16 | + |
| exon-exon | DDB1 | 11 | - | DDB1 | 11 | + |
| exon-exon | PSG4 | 19 | - | PSG1 | 19 | - |
| exon-exon | CSH2 | 17 | + | TAGLN2 | 1 | - |
| exon-exon | HEYL | 1 | - | MORC4 | X | + |
| intron-exon | PACSIN2 | 22 | + | COL1A1 | 17 | + |
| exon-exon | CSH1 | 17 | + | CSH1 | 17 | - |
| exon-intron | SOX13 | 1 | - | CACNA1C | 12 | - |
| exon-exon | SPIRE2 | 16 | + | SPIRE2 | 16 | - |
| intron-exon | TGM2 | 20 | + | DAG1 | 3 | + |
| intron-exon | ZNF14 | 19 | - | RSL1D1 | 16 | - |
| intron-exon | AC067852.1 | 17 | - | SLC2A1 | 1 | + |
| exon-exon | JUP | 17 | - | JUP | 17 | + |
| exon-exon | TGFBI | 5 | + | MYH9 | 22 | - |
| exon-exon | AKIP1 | 11 | - | EIF5 | 14 | - |
| intron-exon | TNK2 | 3 | - | SERPINB9P1 | 6 | + |
| exon-exon | WBP1L | 10 | + | WBP1L | 10 | - |
| intron-exon | ZNF701 | 19 | - | ZNF22-AS1 | 10 | - |
| exon-exon | PSG5 | 19 | - | PSG6 | 19 | - |
| intron-exon | PDXDC2P-NPIPB14P | 16 | + | EI24 | 11 | + |
| exon-intron | GOLGA1 | 9 | + | ITGB3 | 17 | - |
| intron-exon | RGPD2 | 2 | + | CD74 | 5 | + |
| exon-intron | CSRNP2 | 12 | - | LETMD1 | 12 | + |
| intron-exon | SH3PXD2A | 10 | - | UTRN | 6 | - |
| intron-exon | KIDINS220 | 2 | - | COL15A1 | 9 | + |
| exon-intron | PI4KA | 22 | - | WIPI2 | 7 | - |
| exon-intron | JPT2 | 16 | - | UNKL | 16 | - |
| intron-exon | IKZF1 | 7 | + | POLR2A | 17 | - |
| exon-exon | GABRE | X | + | GABRE | X | - |
| intron-exon | SMAP2 | 1 | + | STXBP1 | 9 | - |
| exon-exon | ZMIZ2 | 7 | - | RTRAF | 14 | + |
| exon-exon | MMADHC | 2 | + | PSMD11 | 17 | - |
| exon-intron | COA1 | 7 | + | PDE10A | 6 | - |
| intron-exon | LOC107985915 | 2 | - | RPL18 | 19 | + |
| exon-intron | SIRT5 | 6 | + | SOCS6 | 18 | + |
| exon-exon | ENTPD5 | 14 | - | IGHG4 | 14 | + |
| exon-exon | IGHG1 | 14 | - | DDB1 | 11 | - |
| intron-exon | USF1 | 1 | + | RPS6 | 9 | + |
| intron-exon | SCAF11 | 12 | - | TALAM1 | 11 | - |
| exon-exon | YBX1P1 | 14 | + | YBX1 | 1 | + |
| intron-exon | GBE1 | 3 | - | MALAT1 | 11 | + |
| exon-exon | C6orf120 | 6 | + | PHF10 | 6 | - |
| intron-exon | UBE2E1 | 3 | + | BCAP31 | X | - |
| exon-exon | SH3KBP1 | X | - | DMD | X | - |
| exon-exon | YBX1P1 | 14 | + | YBX1P1 | 14 | - |
| exon-exon | GPATCH4 | 1 | - | DSP | 6 | + |
| exon-intron | UBA7 | 3 | - | ATXN7 | 3 | - |
| exon-exon | SGSM2 | 17 | - | BTG2 | 1 | + |
| exon-intron | SLC30A9 | 4 | - | XRCC2 | 7 | + |
| exon-exon | RILPL1 | 12 | + | COX8A | 11 | + |
| exon-exon | GLRX3 | 10 | + | GLRX3P2 | 6 | + |
| intron-exon | NCALD | 8 | + | NSFL1C | 20 | + |
| exon-intron | C1S | 12 | - | CEP85L | 6 | - |
| exon-intron | GRSF1 | 4 | + | ZSWIM6 | 5 | + |
| exon-exon | CHPF2 | 7 | - | ATF4 | 22 | + |
| exon-exon | ACTG1 | 17 | - | MEPCE | 7 | + |
| exon-intron | ERCC6L2 | 9 | - | ZMYM2 | 13 | + |
| intron-exon | TNS3 | 7 | + | VPS16 | 20 | + |
| intron-exon | ZC3H6 | 2 | - | HNRNPA2B1 | 7 | + |
| intron-exon | FAM72A | 1 | - | HOXB8 | 17 | - |
| intron-exon | AC026167.1 | 3 | - | MALAT1 | 11 | + |
| intron-exon | TNS4 | 17 | + | RPS29 | 14 | - |
| exon-intron | HCAR3 | 12 | - | RP11-324E6.6 | 12 | - |
| intron-exon | LOC100419798 | 1 | + | GON4L | 1 | + |
| exon-intron | DGCR2 | 22 | - | LAMB3 | 1 | - |
| exon-exon | ACTB | 7 | + | SUPV3L1 | 10 | - |
| exon-intron | CMTM6 | 3 | + | PTPRU | 1 | - |
| exon-intron | MAP3K14 | 17 | - | TMEM63B | 6 | + |
| exon-intron | ZNF3 | 7 | - | ZSCAN21 | 7 | - |
| intron-exon | GRIN2A | 16 | + | EMP2 | 16 | + |
| exon-exon | MIEF1 | 22 | - | MIEF1 | 22 | + |
| exon-exon | STARD7 | 2 | + | STARD7 | 2 | - |
| exon-intron | WDR11 | | + | LOC105378519 | 10 | - |
| exon-exon | PRDX2 | 19 | + | PRDX2 | 19 | - |
| exon-intron | GEMIN7-AS1 | | - | GEMIN7 | 19 | - |
| exon-exon | RPS6 | 9 | - | TUBB | 6 | + |
| exon-exon | SOX4 | 6 | - | SOX4 | 6 | + |
| exon-exon | SALL4 | | - | ELAVL3 | 19 | - |
| exon-exon | ENO1 | 1 | + | ENO1 | 1 | - |
| exon-intron | RPS20 | 8 | - | AGBL1 | | - |
| exon-exon | DANCR | 4 | + | TBC1D10A | 22 | - |
| exon-exon | ATP6V1H | 8 | + | PBK | 8 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-intron | RPL9P8 | 15 | - | UBE2Q2P2 | 15 | - |
| exon-exon | ZFAT | 8 | - | MRPL20 | 1 | - |
| exon-exon | B2M | 15 | - | B2M | 15 | + |
| exon-exon | DNAJA1 | 9 | - | DNAJA1 | 9 | + |
| exon-exon | EEF1A1P5 | 9 | - | EEF1A1 | 6 | - |
| exon-intron | AMD1 | 6 | + | FAM193A | 4 | + |
| intron-exon | KIFBP | | + | ACTB | 7 | - |
| exon-exon | SPEN | 1 | + | CLCNKA | 1 | + |
| exon-intron | HINT1 | 5 | - | FIG4 | 6 | - |
| exon-exon | TKT | 3 | + | TKT | 3 | - |
| exon-intron | FGFR1 | 8 | - | PATL2 | | + |
| exon-intron | RNA45SN3 | 21 | + | RNA28SP | 21 | - |
| exon-intron | TRMT5 | | + | TJP1 | 15 | + |
| exon-exon | RPL35AP35 | | + | RPL35A | 3 | + |
| exon-intron | MRPS16 | 10 | - | RBFOX1 | 16 | - |
| exon-intron | GAS5 | 1 | - | BCL2L12 | 19 | + |
| exon-intron | UBA52 | 19 | + | EML5 | 14 | + |
| exon-exon | PTMS | 12 | + | PTMA | 2 | + |
| exon-exon | PPP1R10 | 6 | + | PPP1R10 | 6 | - |
| exon-exon | TLN1 | 9 | + | TLN1 | 9 | - |
| exon-exon | SARDH | 9 | + | SARDH | 9 | - |
| exon-intron | MCM3 | 6 | + | CARS1 | 11 | - |
| exon-exon | CDKN1A | 6 | + | GAPDH | 12 | + |
| exon-intron | RPS26P25 | 4 | - | ANK2 | 4 | - |
| intron-exon | CCDC200 | 17 | - | ATAD3C | 1 | + |
| exon-intron | LOC107986822 | 7 | + | LOC107986823 | | + |
| exon-exon | UBC | 12 | + | TECR | | + |
| exon-intron | GPX1 | 3 | - | TRAPPC9 | 8 | + |
| exon-exon | FTH1 | 11 | - | FBL | 19 | - |
| exon-intron | TOMM22 | 22 | + | ACSBG2 | | + |
| exon-intron | GPR89A | 1 | + | PDZK1 | 1 | + |
| exon-exon | DECR1 | 8 | - | EEF1A1 | 6 | - |
| exon-exon | APLP1 | 19 | + | B2M | 15 | + |
| exon-intron | RPL10AP6 | 3 | - | PTPRG | 3 | - |
| exon-exon | TBL2 | | + | NOP53 | 19 | + |
| exon-intron | CYBA | 16 | - | KIF16B | 20 | + |
| exon-exon | UBE2C | 20 | - | UBE2C | 20 | + |
| intron-exon | GBA | 1 | - | GBAP1 | 1 | - |
| exon-intron | MYBL2 | 20 | + | KNTC1 | 12 | - |
| exon-exon | RNU6-1 | 15 | - | TUBA1B | 12 | - |
| exon-intron | NDUFB8 | 10 | - | CEACAM1 | | - |
| exon-intron | COX4I1 | 16 | + | UTY | Y | + |
| exon-intron | SKP1 | 5 | - | RBFOX1 | 16 | + |
| exon-intron | GPX1 | 3 | - | MIR325HG | | - |
| intron-exon | AL355574.1 | 9 | + | LOC107987141 | 9 | + |
| exon-exon | RASSF1 | 3 | + | RASSF1 | | - |
| exon-intron | HDGF | 1 | - | FRMD5 | | + |
| exon-intron | EEF1A1 | 6 | - | KCNQ5 | 6 | - |
| exon-intron | RPS18P5 | 3 | - | PCNP | 3 | - |
| exon-exon | LINC00662 | 19 | - | LOC105372345 | 19 | - |
| intron-exon | SETD5 | 3 | + | ERO1A | 14 | - |
| exon-exon | RPL17 | 18 | - | NPTX1 | 17 | - |
| exon-intron | C12orf45 | | + | ALDH1L2 | 12 | + |
| exon-intron | GMPR2 | 14 | + | BAIAP2L1 | 7 | - |
| exon-intron | IGLC2 | 22 | + | IGL | 22 | + |
| intron-exon | IGH | 14 | - | IGHV4-34 | 14 | - |
| exon-intron | IGHM | 14 | + | IGHM | 14 | - |
| exon-exon | RPS25P6 | 5 | - | HADHA | 2 | - |
| intron-exon | IGL | 22 | + | IGLV2-23 | | + |
| exon-intron | IGLC3 | 22 | + | IGL | 22 | + |
| exon-exon | OTUD4 | | + | OTUD4 | 4 | - |
| exon-intron | IGLC2 | 22 | + | IGL | 22 | + |
| exon-exon | GDE1 | 16 | - | VDAC1 | 5 | - |
| exon-exon | PARVA | 11 | - | PARVA | 11 | + |
| exon-exon | RPL37A | 2 | - | TPT1 | 13 | - |
| intron-exon | LOC108004532 | | + | LSAMP | 3 | + |
| exon-exon | BIRC5 | 17 | - | EIF4B | 12 | + |
| intron-exon | HERC2P9 | 15 | - | GLO1 | 6 | - |
| exon-exon | ACTB | 7 | - | RPL23A | 17 | + |
| exon-exon | ECHDC3 | 10 | - | ECHDC3 | 10 | + |
| exon-intron | RPLP0 | 12 | - | MYBL2 | 20 | + |
| exon-intron | ZNRD2 | 11 | + | FAM89B | 11 | + |
| exon-intron | CBX5 | 12 | + | BID | | - |
| exon-intron | BMP1 | 8 | + | NLGN4Y | Y | + |
| exon-exon | PGRMC2 | 4 | + | EEF1A1 | 6 | - |
| exon-intron | FSCN1 | 7 | + | SHANK2 | 11 | + |
| exon-exon | NPM1 | 5 | - | MICU1 | 10 | - |
| exon-intron | KRT17 | 17 | - | LOC105371574 | 17 | - |
| exon-exon | RPS16 | 19 | + | MAP3K2 | 2 | - |
| exon-exon | PARP12 | 7 | + | KCTD20 | 6 | + |
| exon-exon | TOP2A | 17 | + | TOP2A | 17 | - |
| exon-exon | STX10 | | + | RBBP4 | 1 | + |
| exon-exon | RPL15P3 | 6 | - | RPLP0P6 | 2 | + |
| exon-exon | SNHG32 | 6 | - | THAP1 | 8 | - |
| exon-exon | LOC105372401 | 19 | - | HNRNPUL1 | 19 | - |
| exon-exon | ZEB1 | 10 | - | ZEB1 | 10 | + |
| exon-exon | UQCRH | 1 | - | CDK16 | X | + |
| exon-exon | SLU7 | 5 | + | SLU7 | 5 | - |
| exon-intron | PSMD11 | 17 | + | NUDT4 | 12 | - |
| exon-exon | BRD2 | 6 | + | RPL14 | 3 | + |
| exon-intron | RPS8P8 | 5 | + | PDZD2 | 5 | - |
| exon-exon | NOP58 | 2 | - | RPL30 | 8 | - |
| intron-exon | AC093866.1 | | + | LOC105377329 | | + |
| exon-exon | CIB1 | 15 | - | SPCS1 | 3 | + |
| exon-exon | FNDC3A | 13 | + | ESD | 13 | - |
| exon-exon | ASH2L | 8 | - | DPY30 | 2 | + |
| exon-intron | MALAT1 | 11 | + | ANKDD1A | 15 | - |
| exon-exon | ZMYND11 | 10 | + | ZFAND4 | 10 | - |
| exon-intron | PAPSS2 | | - | AL138767.1 | | - |
| exon-exon | PGBD2 | 1 | + | RPL23AP82 | 22 | + |
| exon-intron | PES1P1 | 4 | - | AC015631.1 | 4 | - |
| exon-exon | LOC105375567 | 7 | + | AOC1 | 7 | + |
| exon-intron | LINC01579 | 15 | - | LINC02207 | 15 | - |
| exon-exon | FANK1 | 10 | - | DHX32 | 10 | - |
| intron-exon | EGILA | | - | RNASE4 | | - |
| intron-exon | LINC00488 | | + | KATNIP | 16 | + |
| exon-exon | AADACL2-AS1 | 3 | - | IGSF10 | 3 | - |
| exon-intron | LOC101927293 | | + | AL445250.1 | | + |
| intron-exon | LOC112935946 | 3 | - | RHOA | 3 | - |
| exon-exon | LOC112268052 | 9 | + | RAD23B | 9 | + |
| exon-intron | LOC102725148 | | + | AC027458.1 | | + |
| exon-exon | SENP1 | 12 | - | SPDYA | 2 | + |
| intron-exon | PHF13 | 1 | - | KLHL21 | 1 | - |
| exon-exon | ST3GAL5 | 2 | - | KCMF1 | 2 | + |
| intron-exon | AL136501.1 | | + | GALC | 14 | + |
| exon-intron | SLC9A3 | | - | EXOC3 | 5 | - |
| exon-exon | SETD9 | | - | LOC105378980 | | - |
| intron-exon | PCLAF | 15 | - | CSNK1G1 | 15 | - |
| exon-intron | ZBTB44 | 11 | + | ZBTB44-DT | 11 | + |
| exon-exon | RPL32 | 3 | - | CDK16 | X | + |
| exon-exon | LOC107985946 | 2 | + | UBXN4 | 2 | + |
| exon-exon | CFC1 | | + | RNF185 | 22 | - |
| exon-exon | CLIC6 | 21 | + | RPE65 | 1 | - |
| intron-exon | LINC02608 | | + | PPP2R5A | 1 | + |
| exon-intron | SLC26A7 | | + | NEK1 | | - |
| intron-exon | AC009812.3 | 8 | + | SS18L2P1 | 10 | + |
| exon-exon | GLS | 2 | + | PEBP1 | 12 | + |
| intron-exon | MIR4300HG | 11 | + | COX17P1 | 13 | + |
| intron-exon | GTF2IRD2P1 | 7 | - | ND2 | MT | + |
| exon-exon | NFE2L2 | 2 | - | HNRNPA3 | 2 | - |
| exon-exon | NDUFB8 | 10 | - | SEC31B | 10 | - |
| exon-intron | IGLV10-54 | 22 | + | IGL | 22 | + |
| exon-intron | LOC729970 | 1 | - | LOC105378862 | 1 | - |
| exon-exon | IGFBP7 | 4 | + | IGFBP7-AS1 | 4 | + |
| exon-exon | EEF1A1 | 6 | + | EEF1A1 | 6 | - |
| exon-exon | RGS5 | 1 | + | RGS5 | 1 | - |
| exon-exon | FAM162A | 3 | - | FTH1 | 11 | + |
| exon-intron | ALG6 | 1 | + | SMURF1 | 7 | - |
| intron-exon | CENPP | 9 | + | OGN | 9 | - |
| exon-exon | SERTAD4 | 1 | - | SERTAD4 | 1 | + |
| exon-exon | NFIB | 9 | + | NFIB | 9 | - |
| exon-exon | NFIB | 9 | + | NFIB | 9 | - |
| intron-exon | AC096773.1 | | + | LOC102724210 | | + |
| exon-exon | BCL2L13 | 22 | - | BCL2L13 | 22 | + |
| exon-exon | PCOLCE | 7 | - | PCOLCE | 7 | + |
| exon-intron | AQP8 | | + | LOC105370816 | | - |
| exon-intron | CTSD | 11 | - | GPC5 | 13 | + |
| exon-exon | SLC5A2 | 16 | + | SLC5A2 | 16 | - |
| exon-intron | RPL28 | 19 | + | RASGRF2 | 5 | + |
| exon-intron | GID8 | 20 | + | CTSO | 4 | + |
| intron-exon | DLGAP4-AS1 | 20 | - | DLGAP4 | 20 | - |
| exon-exon | CORO1B | | + | CCNG2 | 4 | + |
| exon-intron | SPRYD3 | | - | LINC01920 | | - |
| exon-intron | CAPNS1 | 19 | + | NTRK3 | 15 | + |
| exon-exon | GCA | 2 | + | SH3TC1 | 4 | + |
| exon-intron | PPP1R11 | 6 | + | PDSS2 | 6 | + |
| exon-intron | KDELR2 | 7 | - | NELFB | 9 | - |
| exon-intron | KRTCAP2 | 1 | - | P2RY8 | Y | + |
| exon-exon | IQCK | 16 | - | IQCK | 16 | + |
| exon-exon | IQCK | 16 | - | IQCK | 16 | + |
| exon-exon | LOC105372296 | | - | MED26 | 19 | - |
| exon-intron | RORB-AS1 | | + | RORB | | + |
| exon-exon | ENOSF1 | 18 | - | TYMS | 18 | - |
| exon-exon | USP45 | 6 | - | PNISR | 6 | - |
| exon-exon | COLQ | 3 | - | EAF1 | | - |
| intron-exon | CKAP2L | 2 | - | NT5DC4 | | - |
| exon-intron | RBM23 | 14 | - | DIAPH2 | X | - |
| exon-exon | RAD23A | 19 | - | RAD23A | 19 | + |
| exon-exon | RPS15P4 | 2 | - | AICDA | | - |
| exon-intron | HBG2 | 11 | - | ERC1 | 12 | - |
| exon-intron | ABCF1 | 6 | + | POM121C | 7 | + |
| intron-exon | LOC101927025 | | + | CCND1 | 11 | + |
| exon-exon | EBF1 | 5 | - | CAPZA1 | 1 | - |
| intron-exon | LOC105373937 | | - | LOC101927896 | 2 | - |
| intron-exon | ZIM2 | 19 | - | PRR14 | 16 | + |
| intron-exon | TRIM29 | 11 | + | OAF | 11 | + |
| exon-intron | TMEM132A | 11 | - | TMEM109 | 11 | - |
| exon-exon | LOC107986298 | 4 | - | SPOCK3 | 4 | - |
| exon-intron | RN7SL832P | | + | LERFS | 9 | - |
| exon-exon | EFCAB11 | 14 | - | FOXN3 | 14 | - |
| exon-exon | CDKL5 | X | + | DGCR8 | 22 | + |
| exon-exon | TRDJ2 | | + | TRDC | 14 | + |
| intron-exon | BAALC-AS2 | 8 | + | BAALC | 8 | + |
| exon-intron | FBXO36 | 2 | + | LOC107985996 | | + |
| exon-intron | FEZF2 | | - | PTPRG-AS1 | | - |
| exon-exon | ATP1B1 | 1 | + | GAD1 | 2 | + |
| exon-exon | CTNNA2-AS1 | | + | CTNNA2 | 2 | + |
| exon-intron | LOC101927533 | 2 | + | LOC105374781 | | + |
| exon-exon | TATDN3 | 1 | + | PRKAR1A | 17 | + |
| intron-exon | AC090518.1 | 15 | - | LOC105370832 | 15 | - |
| intron-exon | LIMS4 | 2 | - | MALL | 2 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | H1-10 | 3 | + | H1-10-AS1 | 3 | + |
| exon-exon | FEZF2 | | - | PTPRG-AS1 | | - |
| exon-exon | NQO1 | 16 | - | NFAT5 | 16 | - |
| exon-exon | SEC14L6 | 22 | - | NCKIPSD | 3 | - |
| exon-intron | MICU3 | 8 | + | CEACAM6 | 19 | + |
| intron-exon | SRGAP2-AS1 | | + | LINC02798 | | + |
| exon-exon | C11orf71 | 11 | - | LOXHD1 | 18 | - |
| intron-exon | LOC105371308 | 16 | - | LOC105371307 | 16 | - |
| exon-intron | SLC25A51 | 9 | - | DCAF10 | 9 | - |
| intron-exon | NRIP3 | | + | LOC105376541 | | + |
| exon-intron | NDUFAF4 | 6 | - | FKBP6 | | + |
| intron-exon | IGH | 14 | - | IGHV3-13 | 14 | - |
| exon-intron | FAM228A | | + | ITSN2 | 2 | + |
| exon-exon | VGLL3 | 3 | - | LOC105377196 | | - |
| exon-exon | SLC20A1 | 2 | + | TOMM20 | 1 | - |
| intron-exon | FRG1HP | 9 | - | LOC440896 | 9 | - |
| exon-exon | RPS25 | 11 | + | TRAPPC4 | 11 | + |
| intron-exon | P4HA2 | | - | SEMA6A | 5 | - |
| exon-exon | DMRT1 | | - | LOC105375949 | 9 | - |
| exon-exon | ANK2 | 4 | + | ACO2 | 22 | + |
| exon-exon | NEK1 | 4 | - | RPS6KC1 | 1 | + |
| exon-exon | NIPSNAP3A | 9 | + | NIPSNAP3B | 9 | + |
| exon-exon | ZIM2 | 19 | - | CALM2 | 2 | - |
| intron-exon | AC008771.1 | 5 | - | ZFYVE16 | 5 | - |
| exon-exon | NSUN5 | 7 | - | PPIA | 7 | + |
| exon-exon | SOD2-OT1 | 6 | - | SOD2 | 6 | - |
| exon-exon | SYP | X | - | TSPAN7 | X | + |
| exon-intron | EMC9 | | - | NUTM2B-AS1 | 10 | - |
| intron-exon | SLC38A2 | 12 | + | LOC102723757 | | + |
| exon-exon | TUBB2B | 6 | - | TUBB2BP1 | 6 | - |
| intron-exon | DPYD | 1 | - | NRIP3 | 11 | - |
| exon-exon | SLC37A4 | | - | YY1AP1 | 1 | - |
| exon-exon | DENND5A | 11 | - | PPFIBP2 | 11 | + |
| intron-exon | AL354809.1 | 13 | + | LOC105370169 | 13 | + |
| exon-exon | ND4L | MT | + | ATP8 | MT | + |
| exon-exon | OIP5-AS1 | 15 | + | IAPP | 12 | + |
| exon-exon | DAAM1 | 14 | - | TPT1 | 13 | - |
| exon-exon | JUNB | 19 | - | CAPZB | 1 | + |
| intron-exon | ZFP91-CNTF | 11 | + | LONP2 | 16 | + |
| exon-exon | COX4I1 | 16 | + | NOP16 | 5 | - |
| intron-exon | LAMTOR3 | | - | CYP51A1 | 7 | - |
| exon-intron | ELAVL1 | | - | RCOR3 | 1 | - |
| intron-exon | AF279873.3 | | + | LOC105379364 | | + |
| exon-exon | LRRC8C-DT | | - | LRRC8B | 1 | - |
| exon-intron | RPS28 | 19 | + | MIR4300HG | | + |
| exon-exon | LOC101929295 | 11 | + | LOC100129203 | | + |
| exon-intron | S100A6 | 1 | - | SLC27A5 | | + |
| exon-intron | FEZ1 | | - | SNX11 | 17 | - |
| exon-exon | LOC105374959 | | - | LNC-LBCS | | - |
| exon-intron | CTSA | 20 | + | SLC5A11 | | + |
| exon-intron | LOC728613 | 5 | - | SDHAP3 | | - |
| intron-exon | HEATR4 | 14 | + | RIOX1 | | + |
| exon-intron | MGP | 12 | - | BMP7 | | + |
| exon-intron | FXYD1 | 19 | - | LGI4 | 19 | - |
| exon-exon | NRXN1 | 2 | - | TTYH1 | 19 | + |
| exon-intron | JAM2 | | + | IL21R | | + |
| exon-intron | MGP | 12 | - | SLC1A6 | 19 | - |
| exon-intron | RPS5 | 19 | + | LOC112267968 | 6 | + |
| exon-intron | CHKB-CPT1B | 22 | - | POM121C | 7 | + |
| intron-exon | LOC111818956 | 8 | + | LOC100506990 | 8 | + |
| intron-exon | GBA | 1 | - | GBAP1 | 1 | - |
| exon-intron | GNG3 | | + | AC007493.1 | | + |
| exon-intron | LINC01773 | | - | PKN2-AS1 | | - |
| exon-intron | MPI | | + | CFAP58 | 10 | - |
| exon-exon | MTUS2 | 13 | + | TMEM8B | 9 | + |
| intron-exon | RP11-410D17.2 | | + | CIZ1 | 9 | - |
| exon-exon | CLEC18A | | + | CLEC18C | | + |
| intron-exon | RPH3AL | 17 | + | LOC100506388 | 17 | + |
| exon-intron | MFAP3 | 5 | + | GALNT10 | 5 | + |
| exon-intron | PSMB1 | 6 | - | LOC105378157 | 6 | - |
| exon-exon | BTC | 4 | - | SPIN1 | 9 | + |
| intron-exon | AL021707.2 | | - | CBY1 | 22 | - |
| exon-intron | RPL29P11 | | - | MAP4 | 3 | + |
| exon-intron | KLRB1 | | - | CHST8 | | - |
| exon-intron | RPS15AP1 | | - | KIZ | 20 | - |
| exon-exon | SNHG14 | 15 | + | SNHG14 | 15 | - |
| exon-intron | SLC25A38 | 3 | + | LYAR | 4 | + |
| exon-exon | TACC1 | 8 | - | TACC1 | 8 | + |
| exon-intron | MNDA | 1 | + | LINC00266-2P | | - |
| exon-intron | ZFP41 | | + | MYO18B | 22 | - |
| exon-intron | FBXL15 | 10 | + | LOC101927200 | | + |
| exon-exon | GABARAP | 17 | + | GABARAP | 17 | - |
| exon-intron | PCBP4 | | - | ACTN1-AS1 | | + |
| exon-exon | CDC16 | 13 | - | CDC16 | 13 | + |
| exon-intron | LARGE2 | | + | AL445584.2 | | + |
| intron-exon | AC018730.2 | 2 | - | LINC01159 | | - |
| exon-intron | RHOG | 11 | - | LOC100288798 | 12 | - |
| exon-exon | FOXO3 | 6 | + | AREG | | + |
| exon-intron | IPO4 | 14 | - | ZP3 | 7 | + |
| exon-intron | GALNT3 | | + | AC009495.3 | | + |
| exon-intron | WDR13 | X | + | LOC105371114 | 16 | - |
| exon-intron | RPLP2 | 11 | + | REN | | - |
| exon-intron | PTH1R | 3 | + | SLC12A6 | 15 | + |
| intron-exon | TRA | 14 | + | TRAV1-2 | | + |
| exon-intron | MSRB2 | | + | TRAPPC8 | 18 | + |
| exon-intron | NACA | 12 | - | LMNTD1 | 12 | + |
| exon-exon | MRPS27 | 5 | + | MRPS27 | 5 | - |
| exon-intron | RPL22 | 1 | - | SPTBN4 | 19 | - |
| exon-intron | LINC02437 | | + | HELT | | + |
| exon-intron | MMRN2 | 10 | - | KIAA1217 | 10 | - |
| exon-intron | PSAP | 10 | - | ECT2L | | - |
| exon-exon | SLC12A3 | 16 | - | SLC12A3 | 16 | + |
| exon-intron | DBI | 2 | + | LOC105374188 | | + |
| exon-intron | NDUFA13 | 19 | + | LOC105377706 | | - |
| exon-intron | SWT1 | 1 | + | HERC2P5 | | - |
| exon-intron | RPLP2 | 11 | + | AHNAK | 11 | - |
| exon-intron | RPL18 | 19 | - | GNG7 | 19 | + |
| exon-exon | MTCH1 | 6 | + | MTCH1 | 6 | - |
| exon-intron | LRRC19 | | - | CA5BP1-CA5B | X | - |
| exon-intron | BMS1P20 | 22 | + | IGL | 22 | + |
| exon-exon | FOXO3 | 6 | + | AREG | | + |
| exon-intron | TMEM176A | 7 | + | LOC107985697 | | - |
| exon-intron | KRBOX4 | | + | CHST7 | X | + |
| exon-intron | POP4 | 19 | + | PPP6R2 | 22 | - |
| exon-exon | RPL35A | 3 | + | CPLANE1 | 5 | + |
| exon-intron | LOC105371881 | | - | LOC112267896 | | - |
| exon-intron | ZNF93 | 19 | + | BNIP3P12 | 19 | + |
| exon-intron | LSP1 | | + | DGKB | 7 | - |
| intron-exon | MYOSLID-AS1 | | + | MYOSLID | | + |
| exon-intron | THEM6 | | + | SUGCT | 7 | - |
| exon-intron | LILRB4 | 19 | + | VN1R105P | | + |
| exon-intron | HBA1 | 16 | + | FNDC3B | 3 | + |
| exon-intron | SAE1 | 19 | + | NAMPT | 7 | - |
| exon-intron | LDLRAP1 | | + | PRPSAP1 | 17 | - |
| exon-exon | NUTM2A-AS1 | 10 | - | AGFG2 | | + |
| exon-exon | CPA1 | 7 | + | RELL1 | 4 | + |
| exon-exon | CPSF7 | 11 | + | EVL | 14 | + |
| exon-intron | CEL | | + | ZFAND3 | 6 | - |
| exon-intron | LINC-PINT | 7 | - | AC016831.7 | | - |
| exon-intron | MAPK7 | 17 | + | LINGO2 | | + |
| exon-exon | CTDSP2 | 12 | + | CTDSP2 | 12 | - |
| exon-intron | CNPY4 | | + | LINC02055 | 8 | + |
| exon-intron | PCMTD1 | 8 | - | KDM2A | 11 | - |
| exon-intron | SLC35A2 | X | + | CDC25C | 5 | - |
| exon-intron | IGHG2 | 14 | - | IGH | 14 | - |
| exon-intron | COL6A1 | 21 | + | NLGN4Y | Y | + |
| exon-intron | LOC107986086 | 3 | - | WDR82 | 3 | - |
| exon-intron | LOC728613 | 5 | - | AC026412.3 | | - |
| exon-intron | SH2D3C | | - | ZNF566 | 19 | + |
| exon-intron | ELN | 7 | + | NIN | 14 | + |
| exon-intron | DGKA | 12 | + | AMMECR1 | X | + |
| exon-intron | SAT1 | X | + | NLGN4Y | Y | + |
| exon-exon | NAA60 | 16 | + | AMD1 | 6 | + |
| exon-intron | AMIGO1 | | - | GPBP1 | 5 | + |
| exon-intron | CLPS | | - | SRP68 | 17 | + |
| exon-intron | DGCR2 | 22 | - | PCDH15 | 10 | + |
| exon-intron | OAZ2 | 15 | - | MKRN2 | 3 | - |
| exon-exon | TRGV8 | | - | TARP | | - |
| exon-intron | NDUFS6 | 5 | + | MTERF3 | | + |
| exon-intron | COX8A | 11 | + | LINC01239 | 9 | - |
| exon-exon | LOC105377703 | 5 | + | LOC102546299 | | + |
| exon-exon | IGHJ5 | 14 | - | IGHM | 14 | - |
| exon-intron | PHB | 17 | - | SEPTIN3 | 22 | + |
| exon-exon | COMMD9 | 11 | + | COMMD9 | 11 | - |
| exon-exon | PAPSS2 | | - | PAPSS2 | 10 | + |
| exon-exon | GIGYF2 | 2 | - | GIGYF2 | 2 | + |
| exon-intron | IGLV1-47 | 22 | + | IGL | 22 | + |
| exon-exon | KLHL5 | 4 | + | PDGFA | 7 | + |
| intron-exon | FBXL18 | 7 | - | TNFRSF18 | | - |
| exon-intron | CTSH | 15 | - | NELL1 | 11 | - |
| exon-exon | FBXL19 | 16 | + | ORAI3 | 16 | + |
| exon-intron | STAB1 | | + | CHEK2 | | - |
| exon-intron | CRIP2 | 14 | + | LOC102724715 | 17 | + |
| intron-exon | AL121906.1 | 20 | - | NECAB3 | 20 | - |
| exon-exon | MFSD3 | 8 | - | MFSD3 | 8 | + |
| exon-intron | SFTPB | 2 | - | TPT1 | 13 | + |
| exon-exon | SOCS5 | | - | SOCS5 | 2 | + |
| exon-intron | IFIH1 | 2 | - | MAGI1 | 3 | + |
| exon-exon | LOC105378745 | 1 | + | LOC112267900 | | + |
| exon-exon | XRRA1 | 11 | - | SPCS2 | 11 | + |
| exon-intron | TTTY14 | Y | - | USP9YP28 | | - |
| exon-intron | ZNF385A | 12 | - | TMEM120B | 12 | + |
| exon-intron | ZNF667-AS1 | | + | LOC105372471 | | + |
| exon-exon | SEC31A | 4 | - | PTEN | 10 | + |
| intron-exon | AP001804.1 | | - | OR8B3 | | - |
| exon-intron | RTF2 | 20 | + | AARS1 | 16 | + |
| intron-exon | LOC105371825 | | + | TOB1-AS1 | | + |
| exon-intron | FAM66C | | + | DEFB109F | | + |
| exon-exon | ZNF271P | 18 | + | LOC107985139 | 18 | + |
| exon-exon | LOC107985287 | | - | LOC107986773 | | - |
| intron-exon | AL358074.1 | | + | PBX3 | 9 | + |
| exon-exon | LOC107985411 | 20 | - | LINC00658 | 20 | - |
| exon-intron | CLDN11 | 3 | + | SLC7A14-AS1 | 3 | + |
| exon-intron | CCT6B | | - | CNBD2 | 20 | + |
| exon-intron | APH1B | 15 | + | DIAPH2 | X | + |
| exon-intron | DHCR24 | 1 | - | LEXM | | - |
| exon-exon | LINC02332 | | + | LOC105370399 | | + |
| exon-exon | ODC1 | 2 | - | SNHG27 | 4 | + |
| intron-exon | TYMSOS | 18 | + | TYMS | 18 | + |
| exon-intron | EFCAB6 | 22 | - | ATP8B4 | 15 | + |
| exon-exon | C20orf141 | | + | TMEM239 | | + |
| exon-intron | FAM169A | | - | LOC105370560 | | - |
| exon-exon | FAM104A | 17 | + | FAM104A | 17 | - |
| exon-exon | PUS1 | | - | LOC107984455 | | - |
| exon-exon | DNAJC15 | 13 | + | DDX39A | 19 | - |
| exon-exon | ESS2 | | + | TSSK2 | | + |
| exon-exon | LOC105371225 | | - | LINC02806 | | - |
| intron-exon | AC139795.2 | 5 | + | LOC202181 | 5 | + |
| intron-exon | AL161618.1 | | - | ANKRD66 | | - |
| intron-exon | NADSYN1 | 11 | + | KRTAP5-7 | | + |
| exon-exon | LOC112268071 | 11 | - | YY1AP1 | 1 | - |
| exon-intron | DYRK1B | 19 | - | CCDC178 | | + |
| exon-intron | ABLIM1 | 10 | - | WDR11-AS1 | 10 | - |
| exon-intron | HVCN1 | 12 | - | TRMT11 | | - |
| exon-intron | MRPS6 | 21 | + | TENT5A | 6 | + |
| intron-exon | LOC101927020 | 6 | - | CRISP2 | 6 | - |
| exon-exon | YARS1 | 1 | - | RNF19B | 1 | - |
| intron-exon | ASB15-AS1 | | - | HERPUD2 | 7 | + |
| exon-exon | LOC107985405 | 20 | + | PIGT | 20 | + |
| exon-intron | CEP83-DT | | + | AGTPBP1 | | + |
| exon-intron | ARMC4 | | + | LOC112268060 | | + |
| exon-exon | LOC339260 | 17 | + | CCDC144NL-AS1 | 17 | + |
| exon-intron | BAG1 | 9 | - | LOC105370194 | | + |
| exon-exon | LOC100507334 | | + | MALL | 2 | - |
| exon-intron | IQCF3 | | + | AC097636.2 | | + |
| exon-intron | LINC00608 | | + | GID8 | | - |
| intron-exon | LOC101927020 | 6 | - | CRISP2 | 6 | - |
| exon-intron | FBXO42 | 1 | - | GPBP1 | 5 | - |
| exon-intron | LINC02189 | | - | LOC105376509 | | + |
| exon-exon | MIR3663HG | | - | UBE2J1 | 6 | - |
| exon-intron | MRPL47 | 3 | - | GTF2IRD2B | 7 | + |
| exon-exon | YBX1 | 1 | + | PDE6D | 2 | - |
| exon-intron | LRRC18 | | - | XYLT1 | | + |
| intron-exon | FBXL20 | 17 | + | MED1 | 17 | + |
| exon-intron | LOC105377280 | | + | PARM1 | 4 | + |
| exon-intron | WASH3P | 15 | - | AC140725.1 | | - |
| exon-intron | RPL28 | 19 | + | LOC107987338 | | - |
| intron-exon | AL138921.1 | 10 | + | CWF19L1 | 10 | + |
| intron-exon | LOC105378235 | 5 | + | G3BP1 | 5 | + |
| exon-exon | TUBA1B | 12 | + | RPL17 | 18 | - |
| exon-exon | DHX33 | 17 | - | C1QBP | 17 | - |
| intron-exon | NECAB3 | 20 | + | ACTL10 | | + |
| exon-exon | TSNAXIP1 | 16 | - | RANBP10 | 16 | - |
| exon-intron | RAB11FIP2 | 10 | + | CASC2 | 10 | + |
| exon-exon | GLYR1 | 16 | - | DCTN5 | 16 | + |
| exon-intron | RPS28 | 19 | + | DPP10 | 2 | + |
| exon-exon | C1QA | 1 | + | C1QC | | + |
| exon-exon | RARS2 | 6 | - | HECA | 6 | + |
| exon-exon | CAPZB | 1 | + | CAPZB | 1 | - |
| exon-intron | S100A4 | 1 | - | VSTM1 | | - |
| exon-intron | RPS15 | | + | FGD3 | 9 | + |
| exon-intron | PJA2 | 5 | - | RARB | | + |
| exon-intron | SNRPD2 | 19 | - | CDH18 | | - |
| exon-intron | CLPS | | - | LOC105373150 | X | + |
| exon-intron | SYNPO | 5 | + | PCDH15 | 10 | - |
| exon-intron | RPL35A | 3 | + | PSPH | 7 | + |
| exon-exon | TRBJ2-4 | 7 | + | TRBC2 | 7 | + |
| exon-intron | NDUFB4 | 3 | + | RAP2C-AS1 | X | + |
| exon-exon | CYTH1 | 17 | - | TERF2 | 16 | - |
| exon-intron | TMEM229B | | - | GPHN | 14 | - |
| exon-exon | RALY | 20 | - | RALY | 20 | + |
| exon-intron | ZNF674-AS1 | | + | CHST7 | X | + |
| exon-intron | RPL35A | 3 | + | MRPS31 | | + |
| exon-intron | POLR2L | 11 | - | SHISA9 | 16 | - |
| exon-exon | CYREN | 7 | - | TMEM140 | 7 | + |
| exon-intron | PLD3 | 19 | + | ATAD2 | 8 | + |
| exon-intron | TSPOAP1-AS1 | 17 | + | RNF43 | 17 | + |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN1 | 21 | - |
| intron-exon | LOC112268284 | 21 | - | RNA45SN3 | 21 | + |
| exon-intron | RPS12 | 6 | + | SEC61G-DT | 7 | - |
| exon-exon | VPS39 | 15 | - | RPL13P12 | 17 | - |
| intron-exon | LOC107986930 | 8 | + | SNRPD1 | 18 | + |
| exon-exon | CAPZA1P1 | X | + | CAPZA1 | 1 | + |
| exon-intron | NAAA | 4 | - | NCKAP5 | 2 | + |
| exon-intron | BTF3 | 5 | + | SHANK2 | 11 | + |
| exon-exon | EEF1A1 | 6 | - | RPL34 | 4 | + |
| exon-exon | CAPNS1 | 19 | + | SF1 | 11 | - |
| exon-intron | PARP9 | 3 | - | UBASH3B | 11 | - |
| exon-intron | WDR34 | 9 | - | FSCN1 | 7 | + |
| exon-exon | TAGLN2 | 1 | - | MYL12B | 18 | + |
| exon-intron | PRR11 | 17 | + | LINC01476 | 17 | + |
| exon-intron | LINC01419 | 8 | + | SHANK2 | 11 | + |
| exon-intron | NAMPT | 7 | - | GNG7 | 19 | + |
| exon-intron | CCDC25 | 8 | - | C8orf37-AS1 | 8 | + |
| exon-intron | TPM4 | 19 | + | IL6ST | 5 | + |
| exon-intron | CERS5 | 12 | - | CDH7 | 18 | + |
| exon-exon | CLK3 | 15 | + | ZSWIM7 | 17 | - |
| exon-exon | ERCC3 | 2 | - | AAMP | 2 | - |
| exon-intron | SLC9A8 | 20 | + | MIR3681HG | 2 | - |
| exon-intron | H3-3B | 17 | - | AC010931.3 | 15 | + |
| exon-exon | GDI1 | X | + | TMEM181 | 6 | + |
| exon-exon | RCC2 | 1 | - | CDK2AP1 | 12 | - |
| exon-exon | SEMA3D | 7 | - | HARS1 | 5 | - |
| exon-intron | ATP5MD | 10 | - | LOC105374191 | 3 | + |
| exon-intron | WWTR1 | 3 | - | ACER1 | 19 | + |
| exon-intron | SLC9A8 | 20 | + | MIR3681HG | 2 | - |
| exon-intron | TTC28-AS1 | 22 | + | BHMG1 | 19 | + |
| exon-intron | OIP5-AS1 | 15 | + | RPAP1 | 15 | + |
| exon-intron | PM20D2 | 6 | + | KIAA1328 | 18 | - |
| exon-exon | SUPT7L | 2 | - | RPL38 | 17 | + |
| exon-intron | ACTB | 7 | + | SNORD140 | 22 | - |
| exon-exon | CYB5B | 16 | + | UTP4 | 16 | + |
| intron-exon | SHC4 | 15 | + | EID1 | 15 | + |
| exon-exon | RRP1B | 21 | + | CAMTA1 | 1 | + |
| exon-exon | METAP2 | 12 | - | METAP2 | 12 | + |
| exon-exon | GNB1 | 1 | + | GNB1 | 1 | - |
| exon-intron | RPS21 | 20 | - | DENND1A | 9 | - |
| exon-exon | TTC17 | | - | TTC17 | 11 | + |
| exon-exon | ARSG | 17 | + | WIPI1 | 17 | - |
| exon-intron | CAPN2 | 1 | + | ALG8 | | + |
| exon-intron | ERCC1 | 19 | - | GORAB-AS1 | | + |
| exon-exon | TRAM2 | 6 | - | SORBS3 | 8 | + |
| exon-exon | PPP1CB | 2 | + | PPP1CB | 2 | - |
| exon-exon | XPO1 | 2 | + | XPO1 | 2 | - |
| exon-exon | ACTG1 | 17 | - | TMSB10 | 2 | + |
| exon-exon | UTP6 | 17 | + | UTP6 | | - |
| exon-exon | LINC02154 | | + | LINC02154 | | - |
| intron-exon | C6orf201 | 6 | + | ECI2 | 6 | - |
| exon-exon | VEGFA | 6 | + | NDUFB10 | 16 | + |
| exon-exon | ACTB | 7 | + | ACTB | 7 | - |
| exon-exon | POM121 | 7 | + | POM121B | 7 | + |
| exon-intron | ANXA2 | 15 | + | LOC105378336 | | + |
| exon-exon | NAP1L1 | 12 | + | NAP1L1 | 12 | - |
| exon-exon | CCT6A | 7 | - | CCT6A | 7 | + |
| exon-exon | RPS18 | 6 | + | ACTB | 7 | - |
| exon-exon | TRIM28 | 19 | - | TRIM28 | 19 | + |
| exon-exon | LSM14A | 19 | - | LSM14A | 19 | + |
| exon-exon | AARS1 | 16 | - | SCD | 10 | + |
| exon-intron | VDAC1 | 5 | + | VDAC1P2 | X | - |
| exon-intron | FAU | 11 | - | SLC7A9 | | + |
| exon-exon | LRPPRC | 2 | - | GPC3 | X | - |
| exon-intron | CLPS | | - | RAD51C | 17 | + |
| exon-exon | LOC107983998 | 19 | + | H1-10 | 3 | - |
| exon-exon | NADSYN1 | 11 | - | NADSYN1 | 11 | + |
| exon-exon | RPL14P1 | 12 | + | EGR1 | 5 | + |
| exon-intron | CD52 | 1 | + | ZNF69 | 19 | + |
| exon-intron | RPS17 | 15 | - | LOC105371030 | | + |
| intron-exon | IDI2-AS1 | 10 | + | IDI1 | 10 | - |
| exon-intron | RPS27P8 | | - | PPP1R12B | 1 | - |
| intron-exon | PLEKHM1P1 | 17 | - | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - |
| exon-intron | SH3GL1 | 19 | - | PRR5-ARHGAP8 | 22 | + |
| exon-exon | S100A9 | 1 | + | FKBP8 | 19 | - |
| exon-exon | RAB3GAP2 | 1 | - | DLGAP4 | 20 | + |
| exon-exon | LOC112268052 | 9 | + | RAD23B | 9 | + |
| intron-exon | LOC101927066 | 8 | - | CPQ | 8 | + |
| exon-exon | AP3D1 | 19 | - | MOB3A | 19 | - |
| intron-exon | MAF1 | 8 | - | SHARPIN | 8 | - |
| intron-exon | EIF2D | 1 | - | RASSF5 | 1 | + |
| exon-exon | ANPEP | 15 | - | SNN | | + |
| exon-intron | CHMP6 | | + | UBE2J1 | 6 | - |
| exon-intron | BSG | 19 | - | PICALM | 11 | - |
| exon-exon | IKBKG | X | + | DAZAP1 | 19 | + |
| exon-intron | DDX49 | 19 | + | LINC02343 | 13 | + |
| exon-intron | ILKAP | 2 | - | LINC00673 | 17 | + |
| exon-intron | TAGLN | 11 | + | DHRSX | X | + |
| exon-exon | ENSA | 1 | + | LCMT1 | | + |
| exon-exon | DTX2 | 7 | + | NUB1 | 7 | + |
| exon-intron | SMCHD1 | | + | LOC105377932 | | - |
| exon-exon | FCAR | 19 | + | CNN2 | 19 | + |
| exon-exon | RBM10 | X | + | TENT2 | 5 | + |
| intron-exon | RASGEF1B | 4 | + | LNPEP | 5 | + |
| exon-exon | SH3TC1 | 4 | + | TADA2B | 4 | + |
| exon-intron | B3GAT1 | | - | POM121C | 7 | + |
| intron-exon | ESYT1 | 12 | - | ZC3H10 | 12 | - |
| exon-intron | HNRNPUL2-BSCL2 | 11 | - | NR4A1 | 12 | + |
| exon-intron | RBM33 | 7 | + | LINC01726 | | + |
| exon-exon | GPR132 | | - | CDCA4 | 14 | - |
| exon-intron | NDUFB1 | 14 | - | FKBP8 | 19 | - |
| exon-exon | TBC1D1 | 4 | + | TBC1D1 | 4 | - |
| intron-exon | FOXP1 | 3 | - | MAZ | 16 | + |
| exon-intron | RACK1 | 5 | - | VPS13B | 8 | - |
| intron-exon | RNF31 | 14 | - | PSME2 | 14 | - |
| exon-exon | LOC105376287 | | - | WDR34 | 9 | - |
| exon-exon | ATP1A1 | 1 | - | ATP1A1 | 1 | + |
| exon-exon | GRK2 | 11 | + | MTA1 | 14 | + |
| exon-exon | LILRA2 | | - | LILRA2 | | + |
| exon-intron | HM13 | 20 | + | SLC5A11 | | + |
| exon-intron | USP10 | 16 | + | PTOV1-AS2 | 19 | - |
| exon-intron | OAF | 11 | + | GRIK4 | 11 | + |
| exon-intron | HBA1 | 16 | + | IQCE | 7 | - |
| exon-exon | NAXD | 13 | + | ING1 | 13 | + |
| exon-exon | PDCD4 | 10 | + | LINC01089 | 12 | - |
| exon-intron | TMEM115 | | - | SPAG9 | 17 | + |
| exon-exon | CAMK2N1 | 1 | - | CAMK2N1 | 1 | + |
| exon-intron | C16orf91 | 16 | - | LOC102723841 | | - |
| exon-exon | KMT5C | 19 | + | MVD | 16 | - |
| exon-intron | NPM2 | 8 | + | FGF17 | | + |
| exon-intron | CCDC91 | 12 | + | PRH1-PRR4 | 12 | - |
| exon-intron | GNB2 | 7 | + | RHPN2P1 | | + |
| exon-exon | ACOX3 | 4 | - | DLGAP4 | 20 | + |
| exon-intron | OTULIN | | - | LOC107984893 | | + |
| intron-exon | DCDC2C | | - | LOC105373393 | | - |
| exon-intron | ZNF362 | 1 | + | FOXP1 | 3 | + |
| exon-exon | LOC107986114 | 3 | + | LOC102723430 | | + |
| intron-exon | LOC102724660 | | + | METTL2B | | + |
| exon-intron | SNHG6 | 8 | - | STK32B | | - |
| exon-exon | LINC02607 | | + | LOC101928219 | | + |
| exon-intron | FXYD1 | 19 | - | LGI4 | 19 | - |
| exon-exon | DMAC2L | 14 | + | SRP54 | 14 | + |
| exon-exon | SMAP1 | 6 | + | LOC105377850 | | + |
| exon-exon | KDM7A-DT | 7 | + | RPL14 | 3 | + |
| exon-exon | S100A6 | 1 | - | MAPK9 | 5 | - |
| intron-exon | TBX1 | 22 | - | PLXNB2 | 22 | - |
| exon-exon | RPL4 | 15 | - | TIMP2 | 17 | - |
| exon-exon | SLC38A2 | 12 | - | GGNBP2 | 17 | + |
| exon-exon | RNA45SN2 | 21 | + | CRBN | 3 | - |
| exon-exon | KIAA1217 | 10 | + | DNAJC1 | 10 | - |
| exon-intron | SNHG29 | 17 | + | ITGB3BP | 1 | - |
| exon-exon | PLAU | 10 | + | RNA45SN1 | 21 | + |
| exon-exon | BSG | 19 | + | RNA45SN2 | 21 | + |
| exon-exon | NMI | 2 | - | RNA45SN1 | 21 | + |
| exon-exon | SH3BGRL | X | + | JAK1 | 1 | - |
| exon-exon | LHFPL2 | 5 | - | CRK | 17 | - |
| intron-exon | LOC100130801 | 9 | - | LOC107987047 | 9 | - |
| exon-exon | PPP4C | 16 | - | RNA45SN3 | 21 | - |
| exon-intron | GPI | 19 | - | GARRE1 | 19 | - |
| exon-intron | HSP90B1 | 12 | - | KIAA0319L | 1 | - |
| intron-exon | LINC00408 | 13 | - | ANKRD20A9P | 13 | - |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| exon-exon | COX7C | 5 | - | SEPTIN2 | 2 | - |
| exon-exon | HSPA8 | 11 | - | TPM3 | 1 | - |
| exon-exon | DXO | 6 | - | CLK2 | 1 | - |
| exon-exon | RPLP1 | 15 | - | JCAD | 10 | + |
| exon-exon | RNA45SN2 | 21 | + | PSPH | 7 | - |
| exon-exon | MOSPD3 | 7 | - | DOK1 | 2 | - |
| exon-exon | CD320 | 19 | - | KNG1 | 3 | + |
| exon-exon | SLC22A1 | 6 | - | RNA45SN3 | 21 | - |
| exon-exon | RNA45SN1 | 21 | + | MAOB | X | - |
| exon-exon | ORM2 | 9 | - | DHCR24 | 1 | + |
| exon-exon | HEXA | 15 | - | MAP1B | 5 | + |
| exon-exon | MIA2 | 14 | + | COX2 | MT | + |
| exon-exon | LOC101927764 | 2 | + | PTPN4 | 2 | + |
| exon-exon | IGLV3-25 | 22 | + | RBM25 | 14 | + |
| exon-exon | PCK1 | 20 | + | AMY2B | 1 | + |
| exon-exon | SLC25A51 | 9 | - | DCAF10 | 9 | - |
| intron-exon | RNR2 | MT | + | CYTH2 | 19 | + |
| exon-exon | RNA45SN3 | 21 | + | PRPF40A | 2 | - |
| exon-exon | GALT | 9 | - | RNA45SN2 | 21 | - |
| exon-exon | APOA1 | 11 | - | DRAP1 | 11 | + |
| intron-exon | SLC9B1 | 4 | - | RNA45SN2 | 21 | - |
| exon-exon | GTPBP6 | Y | + | LOC112268284 | 21 | - |
| exon-exon | ZNF664 | 12 | + | GALNT2 | 1 | + |
| exon-exon | MMAB | 12 | + | LRRC59 | 17 | + |
| exon-intron | LOC107984036 | 4 | - | NAA15 | 4 | - |
| exon-exon | GSTM2 | 1 | + | INS-IGF2 | 11 | - |
| exon-intron | EMSY | 11 | + | BCAR3 | 1 | + |
| exon-exon | RN7SK | 6 | + | SERPINA1 | 14 | - |
| exon-exon | TGFBI | 5 | + | AHSG | 3 | + |
| exon-exon | NEURL2 | 20 | - | SPATA25 | 20 | - |
| exon-exon | EIF3D | 22 | + | CYP2A6 | 19 | + |
| intron-exon | CCDC200 | 17 | - | CD8A | 2 | - |
| exon-exon | FTL | 19 | + | KPNA4 | 3 | - |
| exon-exon | SERPINA4 | 14 | - | S100A13 | 1 | + |
| exon-exon | IPP | 1 | - | PRDX1 | 1 | - |
| exon-exon | RNVU1-18 | 1 | - | RBMX | X | - |
| exon-exon | PLD3 | 19 | + | RNA45SN2 | 21 | + |
| exon-exon | EBPL | 13 | - | COL1A2 | 7 | + |
| intron-exon | CPB2 | 13 | - | ZFP90 | 16 | - |
| exon-intron | SIX3 | 2 | - | EPHA5 | 4 | + |
| exon-intron | WASH9P | 1 | - | LOC102724250 | 1 | - |
| exon-intron | KANK2 | 19 | - | ZNF846 | 19 | - |
| exon-intron | COMMD6 | 13 | - | GRM5 | 11 | + |
| exon-intron | IGHV3-72 | 14 | - | IGH | 14 | - |
| exon-exon | SMN2 | 5 | + | NMNAT1 | 1 | + |
| intron-exon | LOC105376568 | 11 | + | LOC102724957 | 11 | + |
| exon-intron | RNA45SN1 | 21 | + | RYR2 | 1 | + |
| intron-exon | SPTBN1 | 2 | + | RPL4 | 15 | - |
| exon-intron | LOC101929609 | 1 | - | ST3GAL3 | 1 | - |
| exon-intron | KSR1 | 17 | + | LUC7L2 | 7 | + |
| exon-exon | KRT7-AS | 12 | - | KRT7 | 12 | - |
| exon-exon | TRMT112 | 11 | - | ESRRA | 11 | - |
| exon-exon | IGHV1-18 | 14 | - | IGHG3 | 14 | - |
| exon-exon | IGHA1 | 14 | - | IGHA2 | 14 | - |
| exon-exon | IGHV1-18 | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-49 | 14 | - |
| exon-exon | RPS12 | 6 | - | HMGA1 | 6 | + |
| exon-exon | LOC100287489 | | - | CGB8 | | - |
| exon-exon | ZFR | 5 | - | FTH1 | 11 | - |
| exon-exon | RPL39P3 | 6 | - | MRPL10 | 17 | - |
| intron-exon | AC011365.2 | | + | SLIT3 | 5 | + |
| intron-exon | TSPAN9 | 12 | + | CCT5 | 5 | + |
| exon-intron | PUF60 | 8 | - | CTIF | 18 | + |
| exon-intron | BTG1 | 12 | - | ST18 | 8 | + |
| exon-intron | HSD17B10 | X | - | AP4S1 | 14 | - |
| exon-intron | RAD21 | 8 | - | FAM120A | 9 | + |
| exon-intron | RAC1 | 7 | + | LOC105370738 | 15 | - |
| intron-exon | ST3GAL5-AS1 | 2 | + | LOC112268420 | 2 | + |
| exon-exon | LDB3 | 10 | + | CDC5L | 6 | + |
| exon-exon | PPP2R2A | 8 | + | SH3KBP1 | X | - |
| exon-intron | LOC105373730 | 2 | - | AC007879.5 | 2 | - |
| exon-exon | ENO1 | 1 | - | MCUR1 | 6 | - |
| exon-exon | ENTPD4 | 8 | - | MIR548A1HG | 6 | + |
| exon-exon | RIPOR1 | 16 | + | S100A11 | 1 | - |
| exon-exon | RAB11B | 19 | - | RAB11B | 19 | + |
| exon-intron | LINC00963 | 9 | + | LOC105371574 | 17 | - |
| exon-exon | TMEM222 | 1 | + | TMEM97 | 17 | + |
| exon-exon | RRP12 | 10 | - | PCGF7P | | + |
| exon-intron | LOC105375267 | | + | LOC105375268 | | + |
| intron-exon | TMEM189-UBE2V1 | 20 | - | RNF114 | 20 | + |
| exon-intron | KRT6A | 12 | - | KRT6C | 12 | - |
| exon-exon | KRT6A | 12 | - | KRT6C | 12 | - |
| intron-exon | CLGN | 4 | - | SCOC | 4 | - |
| intron-exon | AL162377.1 | | + | LOC107984561 | | + |
| exon-exon | CCP110 | 16 | + | PTMS | 12 | + |
| exon-exon | ANKRD27 | 19 | - | DHRS11 | 17 | + |
| intron-exon | RNA28SP | 21 | + | FTH1 | 11 | - |
| exon-exon | CTSD | 11 | - | IFITM10 | 11 | - |
| exon-intron | C19orf33 | | + | SYNJ1 | 21 | + |
| exon-intron | DSCC1 | | + | KB-1471A8.1 | | + |
| exon-exon | TRIM17 | | + | FAF1 | 1 | - |
| exon-exon | NPTN | 15 | + | KRT19 | 17 | - |
| exon-exon | TRIM17 | | + | FAF1 | 1 | - |
| exon-intron | RPS27P3 | 12 | - | TSPAN9 | 12 | - |
| intron-exon | CLN6 | 15 | + | HMGN2P40 | | + |
| exon-intron | RPL7A | 9 | + | SMOC1 | 14 | - |
| exon-exon | CRTAP | 3 | + | METTL16 | 17 | - |
| exon-intron | LINC01411 | 5 | + | LOC105377739 | 5 | + |
| intron-exon | IGH | 14 | - | IGHM | 14 | - |
| exon-intron | RPL27AP6 | 6 | - | AC137770.1 | | + |
| exon-intron | BAAT | | - | LOC113839498 | | - |
| intron-exon | AC009315.1 | | + | LOC107985782 | | + |
| exon-exon | AFF1 | 4 | - | AFF1-AS1 | 4 | - |
| exon-exon | PTGES2 | 9 | + | PTGES2 | 9 | - |
| exon-intron | LOC101928076 | 6 | - | LOC114827828 | | - |
| exon-exon | TPD52L2 | | - | SMARCA4 | 19 | + |
| exon-exon | MYLPF | 16 | + | HBG2 | 11 | - |
| intron-exon | CTNND1 | 11 | - | NFKB2 | 10 | + |
| exon-exon | DUT | 15 | - | TPT1 | 13 | + |
| exon-exon | LOC100130987 | 11 | + | UBAP2L | 1 | + |
| exon-exon | DEXI | 16 | - | CELSR3 | 3 | - |
| intron-exon | MDH2 | 7 | - | STYXL1 | 7 | - |
| exon-exon | TTR | 18 | - | LOC730098 | | - |
| exon-exon | PFKL | 21 | - | CTRB1 | | - |
| exon-exon | CUL1 | 7 | - | CUL1 | 7 | + |
| intron-exon | FP671120.1 | 21 | + | LOC105379508 | | + |
| exon-intron | LAD1 | 1 | - | CLIP2 | 7 | - |
| exon-intron | ZNF276 | 16 | + | SMC3 | | - |
| intron-exon | WFDC1 | 16 | + | LGALS9 | 17 | - |
| intron-exon | RAD54L2 | 3 | + | TAF7 | 5 | + |
| exon-exon | TLR4 | 9 | + | LOC105376244 | 9 | + |
| intron-exon | RP4-753P9.3 | X | - | SASH3 | X | - |
| intron-exon | PBRM1 | 3 | - | STAB1 | 3 | - |
| exon-exon | SFPQ | 1 | - | TBRG4 | 7 | - |
| intron-exon | RP4-753P9.3 | X | - | SASH3 | X | - |
| intron-exon | HSF2BP | 21 | + | CSF3R | 1 | + |
| exon-intron | BTBD1 | 15 | - | LTBP1 | 2 | - |
| intron-exon | LINC01090 | 2 | - | HERPUD1 | 16 | - |
| intron-exon | EOLA1 | X | - | LINC00893 | X | - |
| intron-exon | EPB41 | 1 | + | MMADHC | 2 | + |
| exon-intron | BRD9 | 5 | + | DGKD | 2 | - |
| exon-exon | DRG1 | 22 | - | DEPDC5 | 22 | - |
| exon-intron | RAPGEF2 | 4 | + | KL | 13 | - |
| intron-exon | LOC728392 | 17 | + | NLRP1 | 17 | + |
| exon-exon | RAG2 | 11 | - | BACH2 | 6 | - |
| exon-exon | LINC01749 | 20 | + | DNAJC5 | 20 | + |
| intron-exon | IGH | 14 | - | IGHG3 | 14 | - |
| exon-exon | SHANK3 | 22 | + | TSNARE1 | 8 | - |
| exon-intron | MFN2 | 1 | + | FGGY | 1 | + |
| exon-intron | ISLR2 | 15 | + | FRMPD4 | X | + |
| exon-intron | ICE1 | 5 | - | CAMK1D | 10 | - |
| exon-intron | SETBP1 | 18 | - | LRRN2 | 1 | - |
| intron-exon | ZNF541 | 19 | - | PWP2 | 21 | - |
| exon-intron | RPS15P2 | 1 | + | AL355472.3 | | + |
| intron-exon | EOLA1 | X | - | LINC00893 | X | - |
| exon-exon | CPB1 | 3 | - | CPB1 | 3 | + |
| exon-exon | MPHOSPH8 | 13 | + | SAT1 | X | + |
| exon-exon | HECW2 | | - | BBS9 | 7 | + |
| intron-exon | RNR2 | MT | - | TPD52 | 8 | - |
| exon-exon | CD44 | 11 | - | CD44 | 11 | + |
| intron-exon | INSR | 19 | + | HNRNPA2B1 | 7 | + |
| exon-exon | RPA3 | 7 | + | ND2 | MT | + |
| exon-exon | HYOU1 | 11 | + | TMEM59 | 1 | + |
| intron-exon | NCAPH | 2 | - | TMEM127 | 2 | - |
| exon-exon | HIGD1A | 3 | + | HIGD1A | 3 | - |
| exon-exon | RPS27AP16 | 16 | + | RPS27AP16 | 16 | - |
| exon-exon | ND4 | MT | - | AK3 | 9 | + |
| intron-exon | RAB10 | | - | C15orf40 | 15 | + |
| exon-intron | ZMYM2 | 13 | - | MTCO1P12 | 1 | + |
| intron-exon | ZBED8 | | - | ZBED8 | 5 | + |
| exon-exon | NKX2-2 | | - | REG1B | | + |
| exon-intron | KCNAB1 | 3 | + | LEKR1 | | + |
| exon-exon | TSPAN7 | X | - | TSPAN7 | X | + |
| exon-exon | ACTB | 7 | - | HERPUD2 | 7 | - |
| exon-intron | LOC105374959 | | - | LNC-LBCS | | - |
| exon-exon | SLCO5A1 | 8 | - | CERCAM | 9 | + |
| exon-exon | ADI1 | 2 | + | ADI1 | 2 | - |
| exon-intron | COX2 | MT | - | MTCO2P12 | 1 | + |
| exon-intron | USP22 | 17 | - | CAND1.11 | | + |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-intron | CFDP1 | 16 | - | WDR70 | 5 | - |
| exon-exon | PDS5A | 4 | + | PDS5A | 4 | - |
| exon-exon | SNW1 | 14 | + | SNW1 | 14 | - |
| exon-exon | NLK | 17 | - | NLK | 17 | + |
| exon-intron | LINC00921 | | + | ZNF263 | 16 | + |
| intron-exon | POM121C | 7 | - | DTYMK | | - |
| exon-exon | HSP90AA1 | 14 | + | GNAI2 | 3 | + |
| exon-exon | TMA7 | 3 | + | LRATD1 | 2 | + |
| exon-exon | TBCB | 19 | - | POLR2I | 19 | - |
| intron-exon | SOX2-OT | 3 | + | ZEB1 | 10 | + |
| exon-intron | ATP6V1G1 | 9 | + | FXN | 9 | + |
| exon-intron | IL6ST | 5 | - | GRIN2B | | + |
| exon-exon | NUP205 | 7 | - | NUP205 | 7 | + |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| exon-exon | PABPC1 | 8 | + | PABPC1 | 8 | - |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-exon | ADI1 | 2 | - | TRIM14 | 9 | - |
| intron-exon | TIPRL | 1 | + | ALDH6A1 | 14 | - |
| exon-exon | SH3YL1 | 2 | + | SH3YL1 | 2 | - |
| exon-exon | RCAN3 | | - | RCAN3AS | | - |
| exon-intron | ZKSCAN1 | 7 | + | SNAPC5 | 15 | - |
| exon-exon | WDR76 | 15 | + | COMMD2 | 3 | - |
| exon-intron | RPL3P4 | 14 | + | RPL3P4 | 14 | - |
| exon-intron | HNRNPDL | 4 | + | RNF128 | | + |
| exon-exon | SMARCC2 | 12 | + | SMARCC2 | 12 | - |
| exon-exon | CAPRIN1 | 11 | + | HMCES | 3 | + |
| exon-exon | NFIC | 19 | - | NFIC | 19 | + |
| exon-intron | NDUFC1 | 4 | - | RBFOX1 | 16 | + |
| exon-exon | ADH5P4 | | - | UBE2A | X | + |
| exon-exon | BTF3L4 | 1 | - | BTF3L4 | 1 | + |
| intron-exon | ADIPOR2 | 12 | + | LIG3 | 17 | + |
| exon-exon | MMGT1 | X | + | MMGT1 | X | - |
| exon-exon | ARIH1 | 15 | - | ARIH1 | 15 | + |
| exon-exon | RPL22 | 1 | - | AIMP1 | | + |
| exon-intron | RPL7AP6 | 14 | - | SLX4IP | | - |
| exon-exon | SPCS2P4 | | - | LGALS3BP | 17 | - |
| exon-exon | RAP1B | 12 | - | RAP1B | 12 | + |
| exon-intron | FCF1 | | + | GPHN | 14 | + |
| intron-exon | RAB3GAP2 | 1 | + | MORF4L1P1 | 1 | + |
| exon-intron | RPL13AP25 | 13 | - | SLC31A1 | 9 | + |
| exon-intron | PDE4A | 19 | - | CDC37 | 19 | - |
| intron-exon | LRRC37A | 17 | + | UBB | 17 | + |
| exon-exon | MRPL15 | 8 | + | MRPS22 | 3 | + |
| exon-exon | DEK | 6 | - | DEK | 6 | + |
| exon-exon | SMG7 | 1 | - | SMG7 | 1 | + |
| exon-exon | TUBB | 6 | + | ARHGEF1 | 19 | + |
| exon-exon | ATF5 | 19 | - | ATF5 | 19 | + |
| exon-exon | EMD | X | + | EEF1A1 | 6 | - |
| intron-exon | MCPH1 | 8 | - | LOC100287015 | | - |
| exon-exon | SND1 | 7 | - | SND1 | 7 | + |
| exon-intron | PIGQ | 16 | + | LOC107985960 | 2 | + |
| exon-intron | ZNF343 | 20 | - | RP4-734P14.4 | | - |
| intron-exon | MAP3K15 | | + | SLC39A11 | 17 | - |
| exon-exon | TBC1D15 | 12 | - | TBC1D15 | 12 | + |
| exon-exon | EEF1A1 | 6 | + | EEF1A1 | 6 | - |
| exon-intron | LGALS1 | 22 | + | STRAP | 12 | + |
| exon-exon | USP10 | 16 | + | CSNK2A2 | 16 | - |
| exon-exon | PPP2R5D | 6 | + | S100A6 | 1 | - |
| intron-exon | LOC101927571 | | - | INPP5A | 10 | - |
| intron-exon | LOC105369165 | | - | NUDT4 | 12 | + |
| exon-exon | WDR48 | 3 | + | SULT1B1 | | + |
| exon-intron | EEF1A1 | 6 | - | EEF1A1P6 | 7 | - |
| exon-exon | ZNF22 | 10 | - | ZNF22 | 10 | + |
| exon-exon | RRP12 | 10 | - | PTMA | 2 | + |
| exon-intron | YEATS2 | 3 | + | ACOT1 | 14 | + |
| exon-exon | RNU6-2 | 19 | + | GAS6 | 13 | - |
| intron-exon | RCC1 | 1 | + | PPP1R3B | 8 | - |
| exon-intron | KCNC3 | 19 | - | LOC105376454 | | + |
| exon-exon | STARD7 | 2 | + | STARD7 | 2 | - |
| intron-exon | TUBB3 | 16 | - | MC1R | 16 | - |
| exon-exon | NBPF10 | 1 | - | NBPF19 | 1 | + |
| exon-exon | GBA | 1 | - | GBAP1 | 1 | - |
| exon-exon | NUDT21 | 16 | + | NUDT21 | | - |
| exon-exon | WDHD1 | 14 | + | WDHD1 | 14 | - |
| exon-intron | BAZ1B | 7 | - | FAM172A | 5 | - |
| exon-intron | SALL2 | 14 | + | SALL2 | 14 | - |
| exon-intron | ZC3H6 | 2 | + | LOC101927151 | 19 | + |
| exon-exon | TRIM16L | 17 | + | METTL21A | 2 | - |
| exon-exon | TRRAP | 7 | + | HMGB1 | 13 | - |
| exon-exon | EIF4H | 7 | + | MACROH2A1 | 5 | - |
| exon-exon | TUBBP1 | | - | TUBB | 6 | + |
| exon-exon | RMDN1 | 8 | - | IMPA1 | 8 | - |
| exon-exon | TRAF3IP1 | 2 | + | PTMAP5 | 13 | + |
| exon-intron | HADH | 4 | + | MEIS1 | 2 | + |
| exon-intron | RCAN3 | | - | RCAN3AS | | - |
| intron-exon | LOC101927124 | | + | ABCD3 | 1 | - |
| exon-exon | CYTB | MT | - | HNRNPU | 1 | + |
| exon-exon | IGLV2-14 | 22 | + | IGLL5 | 22 | + |
| exon-exon | ENPP2 | 8 | + | EXOC3-AS1 | 5 | - |
| exon-exon | INS-IGF2 | 11 | + | TM2D1 | 1 | - |
| exon-exon | TNS2 | 12 | + | TPT1 | 13 | - |
| exon-intron | SLC4A4 | 4 | - | PIGU | 20 | - |
| exon-exon | ZNF814 | 19 | - | ZNF587 | 19 | - |
| exon-exon | ZNF586 | 19 | + | ZNF587 | 19 | + |
| exon-intron | GAPLINC | | + | LOC105376637 | | + |
| exon-exon | IFI6 | 1 | - | MARCKS | 6 | - |
| exon-intron | LOC653513 | 1 | - | AC245297.3 | 1 | - |
| intron-exon | A1BG | 19 | + | A1BG-AS1 | 19 | + |
| exon-exon | RPL23AP53 | 8 | - | RHOBTB3 | 5 | + |
| exon-intron | APBA3 | | - | NRXN3 | 14 | + |
| exon-exon | ZNF497 | | - | A1BG | 19 | - |
| exon-exon | SERPINB6 | 6 | + | SERPINB6 | 6 | - |
| exon-intron | LOC102723530 | | - | AC104695.1 | | - |
| exon-exon | GRINA | 8 | - | SNX14 | 6 | - |
| exon-intron | ZFP36L2 | 2 | + | TLE3 | 15 | - |
| intron-exon | ACSM1 | 16 | + | ACSM3 | 16 | + |
| exon-intron | ACVR2A | | + | ORC4 | 2 | + |
| intron-exon | LINC01492 | | + | GMPR | | + |
| exon-exon | TSPYL2 | X | + | THBS1 | 15 | + |
| exon-exon | CLSTN1 | 1 | - | CLSTN1 | 1 | + |
| intron-exon | SPG21 | 15 | + | TRIR | | - |
| exon-exon | NATD1 | | - | TMEM11 | 17 | - |
| exon-exon | KRT6A | 12 | - | KRT6C | 12 | - |
| exon-intron | MS4A7 | 11 | + | PIK3R5 | 17 | - |
| exon-intron | SLC25A17 | | - | AP000439.3 | | + |
| exon-exon | MEA1 | 6 | + | MEA1 | 6 | - |
| exon-exon | EIF3C | 16 | + | CAMK2G | 10 | - |
| exon-exon | RPS12P22 | 11 | + | NEDD8-MDP1 | 14 | - |
| exon-intron | NUS1P1 | | + | NUS1P1 | X | - |
| exon-exon | VIM | 10 | - | VIM | 10 | + |
| intron-exon | ANKRD37 | 4 | - | MRPL49 | 11 | + |
| exon-exon | RPRD1A | 18 | + | RPRD1A | 18 | - |
| exon-exon | EPOR | 19 | - | RDH11 | 14 | - |
| exon-intron | LOC105378052 | | + | AL583835.1 | | + |
| intron-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-exon | CYTH2 | 19 | - | KCNJ14 | 19 | - |
| exon-exon | RNF4 | 4 | + | DCTD | 4 | - |
| intron-exon | MAF1 | 8 | - | SHARPIN | 8 | - |
| exon-exon | PKM | 15 | - | MORN2 | 2 | + |
| exon-intron | MRPS18A | 6 | - | MED12L | 3 | - |
| exon-exon | EIF5AL1 | 10 | - | RHOA | 3 | - |
| exon-exon | SPAG5 | 17 | + | SPAG5 | 17 | - |
| exon-exon | CKAP4 | 12 | + | SENP3-EIF4A1 | 17 | + |
| exon-intron | PFN1 | 17 | - | TADA2A | | + |
| exon-exon | ACTN1 | 14 | + | ACTN1 | 14 | - |
| exon-exon | DAG1 | 3 | - | DAG1 | 3 | + |
| intron-exon | LOC107987335 | Y | - | LOC105372731 | | - |
| exon-exon | LINC01409 | | + | CYTOR | | + |
| exon-exon | RPSAP58 | 19 | + | IMMT | 2 | - |
| exon-intron | RPL7P9 | 1 | - | KCNQ3 | 8 | + |
| exon-exon | KRT6A | 12 | - | KRT6B | 12 | - |
| exon-intron | RPS3AP47 | | - | RPS3AP20 | | - |
| exon-intron | RPS18P5 | 3 | - | PCNP | 3 | - |
| exon-exon | HLA-E | 6 | + | PPFIBP1 | 12 | + |
| exon-intron | LOC105372272 | 19 | - | MRPL4 | 19 | - |
| exon-exon | TMEM123 | 11 | + | PPIA | 7 | + |
| exon-intron | RPS3A | 4 | + | JMY | 5 | - |
| exon-exon | RPL37A | 2 | - | CORO1A | 16 | + |
| exon-exon | RPL15 | 3 | - | RPL15 | 3 | + |
| exon-intron | RPL8 | 8 | - | TENM1 | X | - |
| exon-intron | NOP53 | 19 | + | TMEM63A | 1 | - |
| exon-exon | RBM14 | 11 | + | RBM4 | 11 | + |
| exon-exon | EIF3L | 22 | - | SEPTIN6 | X | - |
| exon-exon | TRIM25 | 17 | - | ISY1-RAB43 | 3 | - |
| exon-intron | RPL13AP25 | 13 | - | LRRC28 | 15 | + |
| intron-exon | LOC643711 | 12 | + | TUFM | 16 | - |
| exon-exon | PCDH9 | 13 | + | PCDH9 | 13 | - |
| exon-exon | CFAP52 | 17 | - | FAAP100 | 17 | - |
| exon-exon | DDX19B | 16 | + | DDX19A | 16 | + |
| intron-exon | NRROS | 3 | - | CST7 | 20 | + |
| exon-exon | SNRPB | | + | DNAJC30 | | - |
| exon-exon | RPRD2 | 1 | + | RHOBTB2 | 8 | + |
| exon-intron | ILF3 | 19 | - | LOC105372687 | | - |
| exon-exon | COX7B | X | - | CNOT1 | 16 | - |
| exon-intron | CYP51A1P2 | | + | KLHL5 | 4 | - |
| intron-exon | ASTN2 | 9 | + | HABP4 | 9 | - |
| exon-exon | KCTD7 | 7 | - | CST3 | 20 | + |
| intron-exon | TRAPPC8 | 18 | - | MXRA7 | 17 | - |
| exon-exon | ATP5MGP2 | | + | CCNI | 4 | - |
| exon-intron | VHL | 3 | - | PIEZO2 | 18 | + |
| intron-exon | LOC105376886 | | - | SELENON | 1 | - |
| exon-exon | CCDC130 | 19 | - | CCDC130 | 19 | + |
| intron-exon | SARNP | 12 | - | BLOC1S1-RDH5 | 12 | - |
| exon-exon | CRYBA1 | 17 | - | CCDC152 | 5 | + |
| exon-exon | LOC105371531 | | - | NTN1 | 17 | - |
| exon-intron | TATDN2 | 3 | - | PANK2 | 20 | - |
| exon-exon | CDC25B | 20 | - | CDC25B | 20 | + |
| exon-exon | SIAH1 | 16 | - | LONP2 | 16 | - |
| exon-exon | SLC2A11 | 22 | - | ATN1 | 12 | - |
| exon-exon | LPCAT1 | 5 | + | AP1S2 | X | - |
| exon-exon | ND2 | MT | - | GOSR1 | 17 | + |
| exon-exon | KDM3A | 2 | - | ADCY1 | 7 | - |
| exon-exon | BICDL2 | | - | THOC6 | 16 | - |
| exon-intron | CDR2L | 17 | - | PEPD | 19 | - |
| exon-intron | PRSS40A | 2 | + | AC140481.2 | | + |
| exon-exon | UBL3 | 13 | + | FZD5 | 2 | - |
| exon-exon | TSPAN10 | | - | RNA45SN2 | 21 | - |
| exon-exon | ND2 | MT | - | DOLPP1 | 9 | - |
| exon-intron | ARL5AP4 | | + | AP000357.2 | | + |
| exon-intron | COL1A1 | 17 | + | ARHGAP26 | 5 | - |
| intron-exon | RNR2 | MT | - | DNAJC7 | 17 | - |
| intron-exon | TOM1L1 | 17 | + | COX11P1 | | - |
| exon-exon | GPAA1 | 8 | - | RN7SL3 | 14 | + |
| exon-exon | CLPTM1 | 19 | - | PNPO | 17 | - |
| exon-exon | COL1A1 | 17 | + | COL1A1 | 17 | - |
| intron-exon | LOC107987075 | 9 | + | FAM27E3 | 9 | + |
| exon-exon | IFFO2 | 1 | + | AP3M1 | 10 | + |
| exon-intron | ATP6V0A1 | 17 | - | WDR59 | 16 | - |
| exon-intron | ZNF19 | 16 | - | AC010547.4 | 16 | - |
| exon-exon | MIR99AHG | 21 | - | LTBP1 | 2 | - |
| exon-intron | LOC105375591 | 7 | + | INSIG1 | 7 | + |
| intron-exon | NINJ2 | | + | C12orf43 | | + |
| exon-exon | SLIT1 | 10 | + | TASOR2 | 10 | - |
| exon-intron | RPL13A | 19 | - | ACTG1 | 17 | + |
| exon-exon | SCAF1 | 19 | - | ADAMTSL4 | 1 | - |
| exon-intron | EIF3I | 1 | - | PJA2 | 5 | + |
| exon-intron | GDE1 | 16 | + | AC092614.1 | | + |
| exon-exon | ALDH1A2 | 15 | + | IGFBP5 | 2 | + |
| intron-exon | AL162231.2 | | - | LOC730098 | | - |
| exon-intron | RLIM | X | + | LRRC24 | 8 | - |
| exon-exon | CYB561 | 17 | + | HTT | 4 | - |
| exon-exon | ATP6 | MT | - | SLC6A17 | | - |
| intron-exon | SPIN1 | 9 | - | C16orf72 | 16 | - |
| exon-exon | RBFOX2 | 22 | + | LOC107985046 | 1 | - |
| exon-exon | PRELID1P6 | 2 | + | SYT7 | 11 | + |
| exon-intron | YEATS2 | 3 | - | NR2E3 | 15 | - |
| intron-exon | RAD51 | 15 | + | POGLUT3 | 11 | + |
| exon-intron | RHPN2 | 19 | + | NBEA | 13 | - |
| intron-exon | RPS27AP5 | | - | RNA45SN1 | 21 | - |
| exon-intron | WDR82 | 3 | + | NFAT5 | 16 | + |
| exon-intron | H3P6 | 2 | - | RBM19 | | + |
| intron-exon | DENND5A | 11 | - | TMEM9B-AS1 | | - |
| exon-exon | LRRC75A | 17 | - | SNHG29 | 17 | - |
| exon-exon | LIMD2 | 17 | - | MAP3K3 | 17 | - |
| exon-exon | RPS14 | 5 | + | WDR6 | 3 | - |
| exon-intron | LRRC58 | 3 | + | MEFV | | + |
| exon-exon | CASC2 | 10 | - | RNF180 | 5 | - |
| exon-exon | CASTOR1 | 22 | + | SPTAN1 | 9 | - |
| intron-exon | LOC100996723 | 1 | + | LOC105378954 | 1 | + |
| exon-intron | KANSL1 | 17 | + | KANSL1 | 17 | - |
| exon-exon | VPS37C | | + | RNA45SN2 | 21 | - |
| exon-exon | ARL6IP5 | 3 | - | RPL13A | 19 | - |
| intron-exon | TMEM266 | 15 | - | ATN1 | 12 | - |
| intron-exon | LOC106029312 | 7 | + | STAG3L2 | 7 | + |
| exon-intron | COX7B | X | - | SIK3 | 11 | + |
| exon-exon | PLEKHA2 | 8 | - | LHFPL6 | 13 | - |
| intron-exon | TTC19 | 17 | + | DCAF10 | 9 | + |
| exon-intron | RPS8 | 1 | - | MAP3K7 | | + |
| exon-intron | RPL10P16 | 19 | + | KIF1A | 2 | + |
| exon-exon | KHSRP | 19 | + | RNA45SN1 | 21 | - |
| exon-exon | C1orf50 | 1 | - | KCTD2 | 17 | - |
| exon-exon | MIF-AS1 | 22 | - | ZFP36L2 | 2 | + |
| intron-exon | TMTC1 | 12 | + | GHR | 5 | - |
| exon-intron | OGFOD3 | | + | TPTEP2-CSNK1E | 22 | + |
| intron-exon | EVI5 | 1 | + | SYNRG | | + |
| intron-exon | MEF2C-AS1 | | - | LITAF | 16 | + |
| exon-exon | BDH1 | 3 | + | TMEM63B | 6 | - |
| exon-exon | CCDC38 | | - | SNRPF | 12 | - |
| exon-intron | LOC105375345 | | + | AC092100.1 | 7 | + |
| exon-exon | SMARCB1 | 22 | - | ORM1 | 9 | - |
| exon-exon | ND5 | MT | + | TTR | 18 | + |
| exon-exon | COX1 | MT | + | PHF12 | 17 | - |
| intron-exon | RUNDC1 | 17 | - | PLEKHH3 | 17 | - |
| exon-exon | ND4 | MT | + | ND6 | MT | + |
| intron-exon | PPEF2 | | - | MXRA7 | 17 | - |
| exon-intron | COX1 | MT | - | SLC44A1 | 9 | - |
| intron-exon | E2F6 | | - | TBC1D2B | 15 | - |
| exon-intron | PRELP | 1 | + | IHO1 | 3 | + |
| intron-exon | AL359764.2 | 1 | + | LOC105373230 | 1 | + |
| exon-exon | ZNFX1 | 20 | + | ZNFX1 | 20 | - |
| exon-exon | COX3 | MT | + | BUD23 | 7 | + |
| exon-exon | CYTB | MT | + | ATP6 | MT | + |
| exon-exon | PTMS | 12 | + | OPN1LW | X | + |
| intron-exon | SIRLNT | | - | SLC17A7 | 19 | - |
| exon-intron | LOC105373138 | | - | AC003035.1 | | - |
| exon-exon | ND4L | MT | + | ND2 | MT | + |
| exon-exon | C1QA | 1 | - | C1QA | 1 | + |
| intron-exon | FSTL5 | 4 | + | ND2 | MT | + |
| intron-exon | CSNK1G1 | 15 | - | NDUFS2 | 1 | - |
| intron-exon | AC093675.1 | 2 | + | GAS6 | 13 | - |
| intron-exon | CADPS | 3 | - | NFKBIB | 19 | + |
| intron-exon | MTMR14 | 3 | + | HSPE1-MOB4 | 2 | + |
| exon-exon | ZNF385A | 12 | - | ND2 | MT | + |
| exon-exon | SYAP1 | X | + | SLC5A5 | 19 | + |
| exon-exon | CAB39L | 13 | - | COX1 | MT | + |
| exon-exon | AP2M1 | 3 | - | AP2M1 | 3 | + |
| exon-intron | HSP90AA2P | 11 | - | FLT1 | | - |
| intron-exon | LOC441204 | | + | PHF2 | 9 | + |
| exon-exon | COX1 | MT | + | TOX4 | 14 | + |
| intron-exon | RNA28SP | 21 | + | UBE2M | 19 | - |
| exon-exon | ND1 | MT | + | ND5 | MT | + |
| exon-exon | AKT2 | 19 | - | BLOC1S1-RDH5 | 12 | + |
| intron-exon | CNNM2 | 10 | + | RIMKLA | | + |
| exon-exon | PIM2 | X | + | STOML2 | 9 | - |
| intron-exon | TNKS1BP1 | 11 | - | NRBF2P6 | 2 | + |
| exon-exon | ADCY1 | 7 | + | KDM3A | 2 | + |
| intron-exon | CEP295 | 11 | + | SBK1 | 16 | + |
| exon-exon | RNA45SN1 | 21 | + | FBXO2 | 1 | - |
| exon-exon | LOC105374085 | | + | LOC112267887 | | + |
| exon-exon | CCDC130 | 19 | - | CCDC130 | 19 | + |
| exon-exon | CERS4 | | + | PIAS4 | 19 | + |
| intron-exon | AC009139.1 | | + | ADAMTS18 | | + |
| exon-exon | CEP112 | 17 | + | MCUB | 4 | + |
| exon-exon | TEN1 | | + | CDK3 | | + |
| intron-exon | RNA18SP5 | 21 | + | SCYL1 | 11 | + |
| intron-exon | SEMA4B | 15 | - | ARPIN-AP3S2 | 15 | - |
| exon-exon | RPS2 | 16 | - | CRYAB | 11 | - |
| exon-intron | RUNDC1 | 17 | - | RETREG3 | 17 | - |
| exon-intron | EMILIN2 | | + | LPIN2 | 18 | + |
| exon-exon | RALGDS | 9 | + | RALGDS | 9 | - |
| exon-exon | PTMS | 12 | - | PTCD3 | | + |
| exon-exon | PAM | 5 | - | PAM | 5 | + |
| exon-exon | SLC2A12 | 6 | - | SLC2A12 | | + |
| exon-exon | RNA45SN2 | 21 | + | C2orf76 | 2 | - |
| exon-exon | RAB34 | 17 | + | RAB34 | 17 | - |
| exon-exon | RNU6-9 | 19 | + | DEDD2 | | - |
| intron-exon | MRPL24 | 1 | - | RRNAD1 | 1 | - |
| exon-intron | ZNF514 | 2 | - | MRPS5 | 2 | - |
| exon-exon | RNU6-3P | X | - | AKNA | | - |
| intron-exon | TUT4 | 1 | - | GOLGA2 | 9 | - |
| exon-exon | LINC01534 | | - | APH1B | | + |
| intron-exon | CSDE1 | 1 | - | SCARB2 | 4 | - |
| intron-exon | CYTH1 | 17 | + | SLX1A-SULT1A3 | 16 | + |
| intron-exon | KIF1B | 1 | + | ND2 | MT | + |
| exon-exon | ATP1B2 | 17 | + | SNCB | 5 | - |
| exon-intron | PLCH2 | 1 | + | GABARAPL2 | 16 | - |
| exon-intron | SAG | 2 | + | PITPNA | 17 | - |
| exon-intron | GSTM5 | 1 | + | MINCR | 8 | - |
| exon-exon | GTF2F1 | 19 | - | TSC2 | 16 | + |
| intron-exon | AC026341.1 | 3 | + | GAP43 | 3 | + |
| exon-exon | ZNF214 | 11 | - | ZNF215 | 11 | - |
| exon-exon | FTL | 19 | - | FTL | 19 | + |
| exon-exon | BSG | 19 | - | BSG | 19 | + |
| exon-exon | COX3 | MT | + | SEMA3B | 3 | + |
| exon-exon | PKD1 | 16 | + | PKD1 | 16 | - |
| intron-exon | ACTR3B | 7 | - | ND2 | MT | + |
| exon-exon | SEC22C | 3 | - | CLIP3 | 19 | - |
| intron-exon | GSAP | 7 | - | ZNF629 | | - |
| exon-exon | RIN3 | 14 | - | RIN3 | 14 | + |
| exon-exon | ND3 | MT | - | CARD10 | | - |
| exon-exon | ND2 | MT | + | MAN2A2 | 15 | + |
| exon-intron | LOC105378179 | 14 | - | LINC02884 | | - |
| exon-exon | PRDM1 | 6 | + | HSPB6 | 19 | - |
| exon-intron | RNA45SN1 | 21 | + | AFF4 | 5 | - |
| exon-intron | CTSD | 11 | - | LINC02689 | | - |
| exon-intron | NPPA-AS1 | 1 | + | LOC114827827 | | + |
| intron-exon | CABP1 | | - | LOC101928300 | | - |
| exon-exon | PAIP1 | 5 | - | HSP90AA1 | 14 | - |
| intron-exon | MLLT10 | 10 | + | ATP6 | MT | + |
| exon-exon | SPIN1 | 9 | - | SPIN1 | 9 | + |
| exon-exon | GPAM | 10 | - | PRKCB | 16 | + |
| exon-intron | LINC00537 | 9 | - | CR786580.1 | | - |
| exon-exon | RNA45SN2 | 21 | + | TBL1X | X | + |
| exon-exon | RNA45SN1 | 21 | + | TECR | | + |
| exon-exon | CRYBB2 | 22 | + | SHB | 9 | - |
| intron-exon | LOC105379273 | Y | - | C2orf27AP1 | | - |
| exon-intron | DLGAP4 | 20 | + | DLGAP4-AS1 | 20 | - |
| intron-exon | LOC107987134 | 9 | - | HMCN2 | 9 | + |
| exon-intron | LOC105372624 | | + | MIR4527HG | | + |
| intron-exon | LSM14A | 19 | + | CENPBD1P1 | 19 | + |
| exon-exon | ABCA4 | 1 | - | PRDX1 | 1 | - |
| exon-exon | RPL14 | 3 | - | NCOR2 | 12 | + |
| exon-exon | EPB41L2 | 6 | - | RXRG | 1 | - |
| intron-exon | LINC01250 | 2 | + | HNRNPU | 1 | - |
| exon-exon | ADGRA2 | 8 | + | ZNF593 | 1 | - |
| intron-exon | RPRD2 | 1 | + | OGFRL1 | 6 | + |
| exon-exon | LOC107984039 | | - | DEFA5 | | - |
| exon-intron | ND1 | MT | - | ADAMTS17 | 15 | + |
| exon-intron | CYTB | MT | + | ASTN2 | 9 | - |
| intron-exon | AKAP9 | 7 | + | BMP7 | | - |
| intron-exon | KCTD8 | 4 | - | LOC107986275 | | - |
| exon-exon | LIN7C | 11 | - | THUMPD3 | 3 | + |
| exon-intron | DYNC1H1 | 14 | + | FAM193B | 5 | - |
| exon-exon | TTC7B | 14 | + | TTC7B | 14 | - |
| exon-exon | IGFBP5 | 2 | - | PRC1 | 15 | - |
| exon-exon | LMO4 | 1 | - | UROD | 1 | + |
| exon-exon | RNF180 | 5 | + | CASC2 | 10 | + |
| exon-exon | ARL14EP | | - | ARL14EP | | + |
| exon-exon | HACE1 | | - | ADSL | 22 | + |
| exon-exon | EEF1G | 11 | - | NYNRIN | | + |
| exon-intron | NUDC | 1 | + | AC211486.3 | 7 | - |
| exon-intron | BGN | X | + | LIX1-AS1 | | + |
| exon-exon | NR1H2 | 19 | + | SMARCD1 | 12 | + |
| intron-exon | NR6A1 | 9 | + | SRP19 | 5 | + |
| exon-exon | RAX | 18 | + | RAX | 18 | - |
| exon-exon | TIMP2 | 17 | + | TIMP2 | 17 | - |
| exon-exon | AHR | 7 | - | LOC101927609 | | - |
| exon-exon | EIF3C | 16 | + | LINC02340 | 13 | - |
| exon-exon | PSMA3-AS1 | 14 | - | PSD3 | 8 | - |
| exon-exon | CAPN12 | 19 | - | MZB1 | 5 | - |
| intron-exon | SPIDR | | + | ZNF432 | | + |
| intron-exon | DAB1 | 1 | - | PMP22 | 17 | - |
| exon-exon | EIF5A | 17 | + | ADAR | 1 | - |
| intron-exon | LOC105375166 | | + | PIK3C2B | 1 | - |
| exon-exon | C16orf72 | 16 | + | PAK1 | 11 | - |
| exon-exon | DCN | 12 | - | ZNF263 | 16 | + |
| intron-exon | ROBO2 | 3 | + | POLR1A | 2 | - |
| intron-exon | CADM2 | 3 | + | ATP6 | MT | + |
| intron-exon | VSX2 | | + | NR2F6 | 19 | - |
| intron-exon | MAP1LC3B | 16 | + | FRRS1L | 9 | - |
| intron-exon | UBQLN1 | 9 | - | GMPS | 3 | + |
| exon-exon | APOL4 | 22 | + | APOL4 | 22 | - |
| exon-exon | PTMS | 12 | + | CDK5R1 | | + |
| exon-exon | NUTM2B-AS1 | 10 | - | TMPO | 12 | + |
| intron-exon | NIPA2 | | + | ROCK2 | 2 | - |
| exon-intron | KIF22 | 16 | + | ITSN1 | 21 | + |
| exon-exon | COPS2 | 15 | + | COPS2 | 15 | - |
| intron-exon | CTNNA2 | | + | NKIRAS2 | 17 | + |
| intron-exon | ZNF536 | 19 | + | ARL4C | 2 | - |
| exon-exon | NUDT4 | 12 | + | SMURF2 | 17 | - |
| intron-exon | RNA28SP | 21 | + | LRP5 | 11 | + |
| exon-exon | TGFBRAP1 | 2 | + | TGFBRAP1 | 2 | - |
| exon-exon | LSM14A | 19 | + | PAG1 | 8 | - |
| exon-exon | PITPNA | 17 | - | CDR1 | X | + |
| exon-exon | BICD1 | 12 | - | BICD1 | 12 | + |
| intron-exon | PSPC1 | 13 | - | THNSL1 | 10 | + |
| intron-exon | TSC22D1 | 13 | - | ND1 | MT | + |
| exon-exon | PEBP1 | 12 | - | PEBP1 | 12 | + |
| exon-exon | KDM6B | 17 | - | KDM6B | 17 | + |
| intron-exon | LOC105378228 | 5 | + | GPX3 | 5 | + |
| exon-exon | FTO | 16 | + | CYCS | 7 | - |
| intron-exon | LOC105371632 | | + | DMAC2 | | - |
| intron-exon | SDK1 | 7 | + | ANP32B | 9 | + |
| exon-exon | INA | 10 | + | HSPA9 | 5 | - |
| intron-exon | LINC01789 | | + | LINC01885 | | + |
| exon-exon | MGLL | 3 | + | MGLL | 3 | - |
| exon-intron | PDCD7 | 15 | - | KHDC1 | 6 | + |
| exon-exon | MALAT1 | 11 | + | RCVRN | 17 | - |
| exon-exon | AHRR | 5 | - | AHRR | 5 | + |
| exon-intron | LOC105374666 | | + | LINC02223 | | + |
| exon-exon | NDUFA12 | 12 | - | CNRIP1 | | - |
| exon-exon | ZXDC | 3 | + | ZXDC | 3 | - |
| exon-exon | SLC25A15 | 13 | + | COL1A1 | 17 | - |
| intron-exon | CAMK1D | 10 | + | LYZ | 12 | + |
| exon-intron | MARK4 | | + | PAX2 | 10 | + |
| intron-exon | PITPNM1 | 11 | - | TFAP2A | 6 | - |
| exon-exon | G6PC3 | 17 | + | RPL23A | 17 | + |
| intron-exon | NCOR1 | 17 | - | TPTEP2-CSNK1E | 22 | - |
| intron-exon | STRN3 | 14 | - | ACTR8 | 3 | - |
| intron-exon | LOC105372981 | | - | DCLRE1B | | + |
| intron-exon | EPB41L1 | 20 | + | SLC25A36 | 3 | + |
| exon-intron | DM1-AS | 19 | + | LOC107075317 | 19 | + |
| intron-exon | NRTN | 19 | - | RAB13 | 1 | - |
| exon-intron | U2AF1L4 | 19 | - | IGFLR1 | | - |
| exon-exon | ARL4D | 17 | - | ARL4D | 17 | + |
| intron-exon | INO80 | 15 | - | PDE6B | 4 | + |
| exon-exon | SYNE1 | 6 | - | ZBTB4 | 17 | - |
| exon-exon | LOC112268236 | | + | LOC112268236 | | - |
| exon-exon | KIFC3 | 16 | - | CANX | 5 | + |
| exon-intron | RNA45SN3 | 21 | + | LINC02067 | 3 | - |
| exon-exon | OLFML2A | 9 | + | EIF5B | 2 | + |
| exon-exon | RNA45SN2 | 21 | + | VPS37C | 11 | - |
| intron-exon | NOTCH2NLA | 1 | - | UBA5 | 3 | + |
| exon-exon | ANKRD36C | 2 | - | LINC00342 | 2 | - |
| exon-intron | LINC00667 | | + | LOC100286986 | | + |
| exon-exon | TMEM41A | 3 | - | TBL2 | | - |
| exon-exon | RNA45SN2 | 21 | + | PNKD | | + |
| intron-exon | ASIC2 | 17 | - | ETV6 | 12 | + |
| intron-exon | TBC1D5 | 3 | - | FAM161A | | - |
| exon-exon | ADPGK | 15 | + | ADPGK | 15 | - |
| exon-exon | NFYA | 6 | + | ZFP36L2 | 2 | - |
| intron-exon | SERINC2 | 1 | + | ARHGAP1 | 11 | - |
| exon-exon | TMEM26 | | + | TMEM26-AS1 | | + |
| exon-exon | RNA45SN1 | 21 | + | TTYH3 | 7 | + |
| exon-exon | NFIC | 19 | - | NFIC | 19 | + |
| exon-exon | SGTA | 19 | - | YIPF3 | 6 | - |
| intron-exon | LOC105374063 | 3 | - | POPDC2 | 3 | - |
| intron-exon | PCED1A | 20 | - | SPOCK1 | 5 | - |
| exon-exon | RPL7AP6 | 14 | - | PGM1 | 1 | + |
| exon-intron | COP1 | 1 | + | AL359265.3 | 1 | + |
| exon-exon | TUBGCP3 | 13 | - | PABPC1 | 8 | - |
| exon-exon | H2BC12 | 6 | - | HSP90AA1 | 14 | - |
| exon-exon | LOC105376861 | 1 | - | HMGCL | 1 | - |
| exon-exon | SLC35E2B | 1 | - | DBI | 2 | + |
| exon-intron | PVT1 | 8 | + | SLC1A2 | 11 | - |
| exon-intron | STMN1 | 1 | - | PDZD2 | 5 | - |
| exon-exon | HAGHL | 16 | - | CCDC78 | 16 | - |
| intron-exon | RNR2 | MT | + | LDHB | 12 | - |
| exon-intron | USP6NL | 10 | - | GRB2 | 17 | - |
| intron-exon | RNR2 | MT | + | NARS1 | 18 | - |
| exon-intron | CLTC | 17 | + | COPS8 | 2 | + |
| exon-exon | MAT2A | 2 | + | CNOT7 | 8 | - |
| intron-exon | LOC105370449 | 14 | - | MCM5 | 22 | + |
| exon-exon | MRS2 | 6 | + | CXXC1 | 18 | - |
| exon-exon | TMEM65 | 8 | - | EEF1A1 | 6 | - |
| exon-exon | ZNF223 | 19 | + | RNPS1 | 16 | - |
| exon-exon | HSP90AB1 | 6 | + | DNAJC21 | 5 | + |
| exon-exon | DGUOK | 2 | + | PRKD2 | 19 | - |
| exon-exon | RPL7AP6 | 14 | - | TAGLN2 | 1 | - |
| exon-exon | RNA45SN2 | 21 | + | FTL | 19 | + |
| exon-exon | RNA45SN1 | 21 | + | RPL8 | 8 | - |
| exon-exon | TMED2 | 12 | + | PPIA | 7 | + |
| exon-exon | DEK | 6 | - | CD164 | 6 | - |
| exon-exon | APLP2 | 11 | + | PRRC2C | 1 | + |
| exon-intron | DSG2 | 18 | + | RNR2 | MT | + |
| intron-exon | SLMO2-ATP5E | 20 | - | GARS1 | 7 | + |
| intron-exon | RNR2 | MT | + | RACK1 | 5 | - |
| intron-exon | LOC105371664 | 1 | + | ADAM15 | 1 | + |
| intron-exon | KRT80 | 12 | + | KRT7 | 12 | + |
| exon-exon | NQO1 | 16 | - | TTC37 | 5 | - |
| intron-exon | LOC102723724 | 6 | - | IVNS1ABP | 1 | - |
| exon-intron | CDK12 | 17 | + | ZNF692 | 1 | - |
| exon-exon | NRG4 | 15 | - | SCAPER | 15 | - |
| exon-exon | ND1 | MT | + | SNHG19 | 16 | - |
| exon-exon | CNPY2 | 12 | - | UBL5 | 19 | + |
| exon-exon | RNA45SN3 | 21 | + | ARIH2 | 3 | + |
| exon-exon | ERCC6 | 10 | - | METAP2 | 12 | + |
| intron-exon | LASTR | 10 | - | LINC02678 | 10 | - |
| intron-exon | RNR1 | MT | + | CCDC50 | 3 | + |
| intron-exon | NR6A1 | 9 | + | LOC107987126 | 9 | + |
| exon-exon | PNRC1 | 6 | + | EZR | 6 | - |
| exon-exon | ATP6 | MT | + | RAD51AP1 | 12 | + |
| exon-exon | UQCRFS1 | 19 | - | CEP350 | 1 | + |
| exon-exon | PNRC1 | 6 | + | EZR | 6 | - |
| exon-exon | TSSK3 | 1 | + | GNB1 | 1 | - |
| exon-exon | MKNK2 | 19 | - | UBAC2 | 13 | + |
| exon-exon | RPL24 | 3 | - | ZBTB11-AS1 | 3 | - |
| exon-intron | RNA45SN1 | 21 | + | HAT1 | 2 | - |
| exon-exon | MRPL30 | 2 | + | CS | 12 | - |
| exon-exon | KPNB1 | 17 | + | MDH1 | 2 | + |
| exon-exon | RNA45SN2 | 21 | + | UNC5CL | 6 | - |
| exon-exon | RPLP1 | 15 | + | SIAH2 | 3 | - |
| exon-intron | IGLC3 | 22 | + | IGL | 22 | + |
| exon-exon | ND5 | MT | + | REG1A | 2 | + |
| exon-intron | PLCG2 | 16 | + | IGH | 14 | - |
| exon-exon | RPS26P25 | 4 | - | KMT2E-AS1 | 7 | - |
| intron-exon | IGH | 14 | - | IGHA1 | 14 | - |
| exon-exon | ATP8 | MT | + | XIST | X | - |
| exon-exon | RNA45SN2 | 21 | + | KLF2 | 19 | + |
| intron-exon | RNR2 | MT | + | RPL10 | X | + |
| exon-intron | IGLV3-1 | 22 | + | IGLL5 | 22 | + |
| intron-exon | EIF4A2 | 3 | + | FUS | 16 | + |
| exon-exon | RNA45SN3 | 21 | + | FTH1 | 11 | - |
| intron-exon | RNR2 | MT | + | KRT19 | 17 | - |
| intron-exon | ZYG11B | 1 | - | RPS13P2 | 1 | - |
| exon-exon | MSH5-SAPCD1 | 6 | + | AIF1 | 6 | + |
| exon-exon | VPS26C | 21 | - | DDOST | 1 | - |
| exon-exon | HSD11B2 | 16 | - | HSD11B2 | 16 | + |
| exon-exon | CNKSR1 | 1 | + | SPIRE2 | 16 | + |
| exon-exon | ZNF675 | 19 | - | MRPS18B | 6 | + |
| intron-exon | DGKI | 7 | + | UQCRHL | 1 | - |
| exon-exon | TUBA1C | 12 | + | RPS23 | 5 | - |
| exon-exon | BPNT2 | 8 | - | FTH1 | 11 | - |
| exon-exon | TMEM53 | 1 | - | LOC107984950 | 1 | - |
| exon-exon | EMP1 | 12 | + | DNAJA2 | 16 | - |
| intron-exon | RNR2 | MT | + | HSP90AB1 | 6 | + |
| exon-intron | WDFY1 | 2 | - | AC093884.1 | 2 | - |
| exon-exon | TFF1 | 21 | - | RALB | 2 | + |
| exon-exon | RNA45SN1 | 21 | + | FTH1 | 11 | - |
| exon-exon | CYTB | MT | + | LZTR1 | 22 | + |
| exon-exon | RN7SK | 6 | + | PGAP6 | 16 | - |
| exon-exon | SNORD3A | 17 | + | GRHPR | 9 | + |
| exon-exon | INAVA | 1 | + | HDDC3 | 15 | - |
| exon-exon | SIRT4 | 12 | - | CALM2 | 2 | - |
| exon-intron | PTMA | 2 | + | SPCS2 | 11 | + |
| exon-intron | GTF2IP1 | 7 | - | CUEDC1 | 17 | - |
| exon-exon | RNA45SN1 | 21 | + | GDI2 | 10 | - |
| exon-intron | ZNF217 | 20 | - | BCAS1 | 20 | - |
| exon-exon | SIGMAR1 | 9 | - | GAPDH | 12 | + |
| exon-exon | DCAF8 | 1 | - | LOC729867 | 1 | - |
| exon-exon | SUMF2 | 7 | + | PHKG1 | 7 | + |
| exon-exon | AACS | 12 | + | STARD5 | 15 | - |
| exon-exon | PAQR4 | 16 | - | PAQR4 | 16 | + |
| exon-exon | TAZ | X | + | ARL6IP4 | 12 | + |
| exon-exon | RNA45SN1 | 21 | + | SPHK2 | 19 | + |
| exon-exon | DNAJC21 | 5 | - | TMED9 | 5 | + |
| exon-intron | BIVM-ERCC5 | 13 | + | POLR2J2 | 7 | - |
| exon-exon | ATP8 | MT | + | MAPK3 | 16 | - |
| exon-exon | ODC1 | 2 | + | ODC1 | 2 | - |
| intron-exon | RNR2 | MT | + | RPS17 | 15 | - |
| exon-exon | MUS81 | 11 | - | MUS81 | 11 | + |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| exon-exon | ND1 | MT | + | PGC | 6 | - |
| exon-exon | NFKBIB | 19 | + | CYTB | MT | + |
| exon-exon | CCT5 | 5 | + | ND4 | MT | + |
| exon-exon | ASTN2 | 9 | + | ASTN2 | 9 | - |
| intron-exon | HIRA | 22 | - | HSD11B2 | 16 | + |
| exon-exon | MED14 | X | - | CDR2L | 17 | + |
| intron-exon | RNR2 | MT | + | CYB561 | 17 | - |
| exon-exon | IVD | 15 | + | PTGES | 9 | - |
| exon-exon | GALNT8 | 12 | + | CHD4 | 12 | - |
| exon-intron | NAP1L1 | 12 | - | AL008725.1 | 20 | - |
| exon-exon | TM9SF4 | 20 | + | ARPC1B | 7 | + |
| intron-exon | ARHGEF11 | 1 | - | ISG20L2 | 1 | - |
| exon-exon | RPL6P27 | 18 | - | RPL9P8 | 15 | - |
| exon-exon | PRPF18 | 10 | + | CDC123 | 10 | + |
| intron-exon | PIAS1 | 15 | + | CCDC32 | 15 | - |
| exon-exon | RNU6-1 | 15 | - | KIF12 | 9 | - |
| exon-intron | PPP2R3B | Y | - | EVL | 14 | - |
| intron-exon | RP11-807H22.7 | 11 | + | FOLR3P1 | 11 | + |
| exon-intron | ZNF433-AS1 | 19 | + | AHCYL2 | 7 | - |
| intron-exon | SOX2-OT | 3 | + | RFC1 | | - |
| exon-exon | RNA45SN3 | 21 | + | MARK2 | 11 | + |
| exon-exon | RANGAP1 | 22 | - | CCDC151 | 19 | - |
| exon-intron | EIF4A2 | 3 | + | LARS2 | | - |
| exon-exon | FAM189B | | + | FAM189B | 1 | - |
| exon-exon | CEP70 | 3 | + | CEP70 | 3 | - |
| exon-intron | MTERF1 | 7 | - | LOC101927473 | | - |
| exon-intron | H3-3B | 17 | - | RP11-507B12.2 | | - |
| exon-exon | TXNDC12 | | - | KLHL42 | 12 | + |
| exon-exon | WDR33 | 2 | - | GNAS | 20 | + |
| intron-exon | MICOS10 | 1 | - | EEF1D | 8 | - |
| exon-exon | TENM3 | 4 | + | DUS1L | 17 | - |
| intron-exon | PIGL | 17 | + | PDCD2L | 19 | + |
| exon-exon | SEPTIN2 | 2 | - | SEPTIN2 | 2 | + |
| intron-exon | AC004160.1 | 7 | + | LOC105375153 | 7 | + |
| intron-exon | PITPNM2 | 12 | - | MRPS5 | 2 | - |
| exon-intron | SYCE1L | 16 | + | ESRP1 | 8 | - |
| exon-exon | MMP14 | 14 | + | SMARCC2 | 12 | - |
| exon-exon | ZNF385A | 12 | - | FAM184B | 4 | - |
| exon-exon | TAX1BP1 | 7 | - | TAX1BP1 | 7 | + |
| exon-exon | PTMS | 12 | + | HNRNPA0 | 5 | - |
| exon-intron | YTHDC1 | 4 | - | TSPAN32 | 11 | + |
| exon-exon | POLM | 7 | + | POLM | 7 | - |
| exon-exon | RPL8 | 8 | - | ITPRID1 | 7 | + |
| exon-exon | LINC02519 | | - | LOC105378148 | | - |
| exon-exon | PMM2 | 16 | + | FDPS | 1 | + |
| exon-intron | MANF | | + | UCMA | | - |
| exon-exon | KRT6C | 12 | - | KRT6B | 12 | - |
| exon-intron | LOC100287489 | | - | CGB8 | | - |
| exon-exon | KRT5 | 12 | + | UBE2L3 | 22 | + |
| exon-exon | TP53INP2 | 20 | + | RPL34 | 4 | + |
| exon-exon | TENT4A | 5 | + | SSR2 | 1 | - |
| exon-exon | DUSP1 | 5 | + | DUSP1 | 5 | - |
| exon-exon | RPL27A | 11 | + | TUBB6 | 18 | + |
| exon-exon | CTC-338M12.4 | 5 | + | TRIM52-AS1 | | + |
| exon-exon | HSPA9 | 5 | - | RPS20 | 8 | - |
| intron-exon | DCUN1D3 | 16 | - | EEF1A1 | 6 | - |
| intron-exon | RNR1 | MT | + | PPP5C | 19 | + |
| exon-exon | LDHB | 12 | - | BCAR1 | 16 | - |
| intron-exon | IGH | 14 | - | IGHA2 | 14 | - |
| exon-intron | ND4 | MT | + | ARSL | X | + |
| intron-exon | B3GNT5 | 3 | + | EDF1 | 9 | - |
| exon-exon | ND6 | MT | + | GSTZ1 | 14 | + |
| exon-intron | ATP6 | MT | + | COX3 | MT | + |
| intron-exon | RNR2 | MT | + | RAB13 | 1 | - |
| intron-exon | IGH | 14 | - | IGHA2 | 14 | - |
| exon-exon | ABHD17C | 15 | + | BCL2A1 | 15 | - |
| intron-exon | RNR2 | MT | + | HNRNPA1P12 | 5 | - |
| exon-exon | RNA45SN2 | 21 | + | ACTB | 7 | - |
| exon-exon | NDUFB4 | 3 | + | RPS11 | 19 | + |
| intron-exon | AC008771.1 | 5 | - | ZFYVE16 | 5 | - |
| intron-exon | NOCT | 4 | - | CRLF3 | 17 | - |
| exon-exon | ASAP1 | 8 | - | PSMD3 | 17 | + |
| exon-exon | CCDC125 | 5 | - | SET | 9 | + |
| exon-exon | CALR | 19 | + | RPL26 | 17 | - |
| exon-exon | TNS2 | 12 | - | TNS2 | 12 | + |
| exon-exon | CFD | 19 | + | MED16 | 19 | - |
| exon-intron | PITX1 | 5 | - | PCNP | 3 | - |
| exon-exon | ANKRD36C | 2 | - | LINC00342 | 2 | - |
| exon-exon | SERBP1P5 | 4 | - | ARMCX3 | X | + |
| exon-exon | RAB11FIP1 | 8 | - | HMGN2P4 | 5 | - |
| exon-intron | PKM | 15 | - | TMEM202-AS1 | 15 | - |
| exon-exon | RNA45SN1 | 21 | + | U2AF1L5 | 21 | - |
| exon-exon | ND1 | MT | + | ACTG1 | 17 | - |
| exon-exon | TSSK4 | 14 | - | SELENON | 1 | + |
| exon-exon | UQCRH | 1 | + | BRD2 | 6 | + |
| exon-exon | SSB | 2 | + | SCD | 10 | + |
| exon-exon | CYBA | 16 | - | ELOVL5 | 6 | - |
| exon-exon | SIRT4 | 12 | - | PLAAT1 | 3 | + |
| exon-exon | CALM2 | 2 | - | UCP2 | 11 | - |
| exon-exon | GUK1 | 1 | + | ARFGAP1 | 20 | + |
| exon-exon | WDR12 | 2 | - | VPS52 | 6 | - |
| exon-exon | H1-4 | 6 | + | EEF1A1P5 | 9 | + |
| exon-intron | CLIC1 | 6 | - | RNR2 | MT | + |
| intron-exon | SEM1 | 7 | - | PKM | 15 | - |
| exon-intron | UBE2G2 | 21 | + | MAP3K10 | 19 | + |
| exon-exon | RPL6P27 | 18 | - | KPNA4 | 3 | - |
| intron-exon | RNR2 | MT | + | EEF1A1P5 | 9 | + |
| exon-exon | SNORD13 | 8 | + | MIS18BP1 | 14 | - |
| intron-exon | EEF2 | 19 | + | RUFY1 | 5 | + |
| exon-exon | ND2 | MT | + | TSPAN31 | 12 | + |
| exon-exon | SNORD3A | 17 | + | PRPF4 | 9 | + |
| exon-exon | LNPEP | 5 | + | ATP1B1 | 1 | + |
| exon-exon | HDLBP | 2 | - | FAM174A | 5 | + |
| exon-intron | SEPTIN7 | 7 | + | ARPC3 | 12 | - |
| exon-exon | SMC3 | 10 | + | RNF13 | 3 | + |
| intron-exon | EIF4A2 | 3 | + | PPDPF | 20 | + |
| intron-exon | RNR2 | MT | + | ND1 | MT | + |
| exon-exon | TCAIM | 3 | + | TPI1 | 12 | + |
| exon-exon | HNRNPD | 4 | - | NOL6 | 9 | - |
| exon-exon | RUNDC3A | 17 | - | RUNDC3A-AS1 | 17 | - |
| exon-exon | HSPA9 | 5 | - | SLC35A2 | X | - |
| exon-exon | ATMIN | 16 | + | SIN3A | 15 | - |
| exon-exon | RNA45SN2 | 21 | + | NVL | 1 | - |
| exon-exon | NCOR1 | 17 | - | SF3B1 | 2 | - |
| intron-exon | LOC105371703 | 17 | - | SLC35E1 | 19 | - |
| exon-exon | RNA45SN3 | 21 | + | VAPA | 18 | + |
| exon-exon | RN7SK | 6 | + | MYO5B | 18 | - |
| exon-exon | CAMKK2 | 12 | - | KCNK5 | 6 | - |
| exon-exon | ATP5MG | 11 | + | PRKAR1A | 17 | + |
| exon-exon | HMGB2 | 4 | - | PTMA | 2 | + |
| exon-intron | LOC107985325 | 19 | + | RDH13 | 19 | + |
| exon-exon | RNA45SN3 | 21 | + | ACTB | 7 | - |
| exon-exon | EIF2S2 | 20 | - | TP53I11 | 11 | - |
| exon-exon | STRN | 2 | - | MRPL9 | 1 | - |
| intron-exon | RSPH14 | 22 | + | BCR | 22 | + |
| exon-exon | RPS12P22 | 11 | - | ECM1 | 1 | + |
| exon-intron | PGM1 | 1 | + | RNR2 | MT | + |
| exon-exon | CCND1 | 11 | + | RPL4 | 15 | - |
| intron-exon | RNR2 | MT | + | H19 | 11 | - |
| intron-exon | TM7SF3 | 12 | - | SSBP1 | 7 | + |
| exon-exon | RAB22A | 20 | + | KIAA0100 | 17 | - |
| exon-exon | CEBPZ | 2 | - | KRT19 | 17 | - |
| intron-exon | LOC107985736 | 1 | - | HSPD1 | 2 | - |
| exon-exon | MALAT1 | 11 | + | RPN1 | 3 | - |
| exon-exon | RNA45SN2 | 21 | + | FTH1 | 11 | - |
| exon-exon | RPL15 | 3 | + | CXCL8 | 4 | + |
| exon-exon | RPL10A | 6 | + | EEF1A1 | 6 | - |
| exon-intron | ARF6 | 14 | + | LOC100506446 | 14 | + |
| intron-exon | SCARB2 | 4 | - | ND4 | MT | + |
| intron-exon | AC034114.2 | 8 | + | ID1 | 20 | + |
| exon-exon | CD24 | 6 | - | RHOG | 11 | - |
| intron-exon | ACSL4 | X | + | RPL15 | 3 | + |
| exon-exon | RPS20 | 8 | - | JOSD2 | 19 | - |
| exon-exon | ATF4 | 22 | + | CDV3 | 3 | + |
| exon-exon | CTSA | 20 | + | PIGQ | 16 | + |
| exon-intron | EEF1B2P3 | X | - | POLA1 | X | - |
| exon-exon | ST14 | 11 | - | ST14 | 11 | + |
| exon-exon | PSMC3 | 11 | - | DAP | 5 | - |
| exon-exon | RPS3 | 11 | + | CLDN4 | 7 | + |
| intron-exon | HECTD1 | 14 | - | HCFC1R1 | 16 | - |
| exon-exon | LASP1 | 17 | + | RHBDL3 | 17 | - |
| exon-intron | CBX1 | 17 | + | GNG7 | 19 | + |
| intron-exon | DGKI | 7 | + | UQCRHL | 1 | - |
| intron-exon | ADAP1 | 7 | - | NOLC1 | 10 | + |
| exon-exon | PAGR1 | 16 | - | LOC112268170 | 16 | - |
| exon-exon | PPP6R2 | 22 | + | PPP1R13L | 19 | - |
| exon-exon | EPB41L2 | 6 | - | LARP1 | 5 | + |
| exon-exon | NEDD8-MDP1 | 14 | - | CDA | 1 | + |
| exon-intron | IST1 | 16 | + | PARD3 | 10 | + |
| exon-exon | GATA4 | 8 | - | GATA4 | 8 | + |
| exon-exon | RCC1 | 1 | + | NSMCE2 | 8 | + |
| exon-exon | HNRNPUL1 | 19 | + | RPLP0P6 | 2 | + |
| exon-intron | PDIA6 | 2 | - | BANP | 16 | + |
| exon-exon | RABL6 | 9 | + | ARHGEF16 | 1 | + |
| exon-exon | SRSF10 | 1 | - | MFSD4B | 6 | + |
| exon-exon | SLAIN2 | 4 | + | TUBB4B | 9 | + |
| intron-exon | RAP1GAP2 | 17 | + | TNFRSF1B | 1 | + |
| exon-intron | AGTR2 | | - | ZNF530 | 19 | + |
| exon-exon | RNA45SN3 | 21 | + | MYLPF | 16 | + |
| exon-exon | LMNB2 | | + | NHSL2 | X | + |
| exon-exon | NEDD8-MDP1 | 14 | - | RPS3 | 11 | + |
| exon-exon | MYLPF | 16 | + | TCF4 | 18 | - |
| exon-exon | SCAMP2 | 15 | - | CSNK1D | 17 | - |
| exon-intron | FAM98C | 19 | - | FAM98C | 19 | + |
| exon-exon | RPSAP15 | | + | RPSAP26 | | + |
| exon-exon | TNNT3 | 11 | - | RNA45SN2 | 21 | - |
| intron-exon | MIR497HG | 17 | - | OPA3 | 19 | + |
| exon-exon | SIDT2 | 11 | + | REXO4 | 9 | - |
| exon-exon | RNA45SN3 | 21 | + | RPS19 | 19 | + |
| exon-intron | RNA45SN2 | 21 | + | TXNRD1 | 12 | + |
| exon-exon | KRBA1 | | - | RPL21P46 | | + |
| exon-exon | ZFAND5 | 9 | - | CRYAB | 11 | - |
| exon-exon | PABPC1 | 8 | + | PABPC1 | 8 | - |
| exon-intron | RNA45SN1 | 21 | + | LDHBP2 | | - |
| exon-exon | PIGY | 4 | + | JUN | 1 | - |
| exon-exon | AGAP2 | 12 | - | IL11 | 19 | + |
| intron-exon | AC140481.8 | | + | AMER3 | | + |
| exon-exon | SNHG29 | 17 | + | GPR155 | 2 | - |
| intron-exon | TSPOAP1 | 17 | + | TSPOAP1-AS1 | 17 | + |
| exon-exon | MYO5B | 18 | - | GACAT3 | | + |
| exon-exon | CSDE1 | 1 | - | RPS8 | 1 | + |
| exon-intron | UBE2D3 | 4 | - | VEZT | 12 | - |
| exon-intron | LINC00504 | | - | AC006296.3 | | - |
| intron-exon | MIR5689HG | | - | LINC00518 | | - |
| exon-intron | ATP6V1B1-AS1 | | - | ATP6V1B1 | | - |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-intron | HNRNPF | 10 | - | PIKFYVE | | + |
| exon-intron | PDAP1 | 7 | - | AC069277.1 | | + |
| exon-intron | LOC730098 | 9 | - | RGPD1 | 2 | + |
| exon-intron | DDRGK1 | | + | SLC35F3 | 1 | + |
| intron-exon | UACA | 15 | + | CALM3 | 19 | + |
| intron-exon | CUEDC1 | 17 | - | KRT14 | 17 | - |
| exon-exon | PEG10 | 7 | - | EIF3D | 22 | - |
| intron-exon | TXNRD1 | 12 | + | SAMM50 | | + |
| exon-exon | PCM1 | 8 | + | FGL1 | 8 | - |
| exon-exon | CAPNS1 | 19 | + | FTH1 | 11 | - |
| intron-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-exon | FTH1 | 11 | - | RPS10P26 | | - |
| exon-exon | RPLP2 | 11 | - | UBE2S | | - |
| exon-exon | PTMS | 12 | + | NIT2 | 3 | + |
| exon-exon | SMAP2 | 1 | - | CCT7 | 2 | + |
| exon-intron | MCM4 | 8 | + | UBE2V2 | 8 | + |
| exon-exon | ACOT2 | 14 | + | OAS3 | 12 | + |
| exon-exon | ZNHIT1 | 7 | + | DPF2 | 11 | + |
| exon-exon | LOC100287489 | | - | CGB3 | | - |
| exon-exon | RBM14 | 11 | + | RBM4 | 11 | + |
| exon-exon | TUBB4B | 9 | + | HSP90AB1 | 6 | + |
| exon-exon | SCAMP2 | 15 | + | NELFB | 9 | + |
| exon-intron | NDUFA11 | 19 | - | NBEAP3 | 22 | + |
| exon-exon | HCST | 19 | + | TTC23 | 15 | - |
| intron-exon | PRR14L | 22 | - | CPNE1 | 20 | - |
| exon-exon | MED16 | 19 | - | MED16 | 19 | + |
| intron-exon | TRGV10 | | - | TARP | | - |
| exon-exon | MICU1 | 10 | + | MICU1 | 10 | - |
| exon-exon | LPP | 3 | + | ST6GAL1 | 3 | + |
| exon-exon | CTRL | 16 | + | CTRL | 16 | - |
| exon-exon | CTBS | 1 | + | LOC105378819 | | + |
| exon-intron | MTARC2 | | + | LOC107986770 | 7 | + |
| exon-intron | LGALS1 | 22 | + | MAGI1 | 3 | + |
| exon-exon | SULT1A1 | 16 | - | NONO | X | + |
| exon-exon | LDB2 | 4 | - | TAX1BP1 | 7 | + |
| exon-intron | ATP6V0C | 16 | + | CACNA1B | 9 | - |
| intron-exon | LOC101930094 | | - | RSPH1 | 21 | - |
| exon-intron | PI4KAP2 | 22 | + | PI4KAP1 | 22 | - |
| exon-exon | SHISA4 | 1 | - | SHISA4 | 1 | + |
| intron-exon | AC073343.2 | | + | RSPH10B2 | | + |
| exon-exon | TMEM91 | 19 | + | DTX4 | 11 | + |
| intron-exon | NSUN5P2 | | - | POM121C | 7 | + |
| exon-exon | SOD2 | 6 | - | MKNK2 | 19 | - |
| exon-exon | HSP90AB1 | 6 | - | HSP90AB1 | 6 | + |
| exon-intron | PHGR1 | | + | PKD1 | 16 | - |
| exon-exon | LOC108783654 | 17 | - | HSD17B1P1 | | - |
| exon-exon | TMBIM4 | 12 | + | TMBIM4 | 12 | - |
| exon-intron | HCST | 19 | + | IMMT | 2 | - |
| exon-intron | C16orf91 | 16 | - | LOC102723841 | | - |
| exon-intron | ALOX12-AS1 | 17 | - | ALOX12P2 | 17 | - |
| intron-exon | PLA2G1B | 12 | + | TIPIN | 15 | - |
| exon-intron | CHUK | | - | AGO4 | 1 | + |
| intron-exon | IGH | 14 | - | IGHA1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG2 | 14 | - |
| exon-intron | BCL7A | 12 | - | AC069503.1 | | - |
| intron-exon | LINC02884 | | + | YIPF3 | 6 | - |
| exon-exon | SLC25A44 | 1 | - | RIPK2 | 8 | + |
| exon-intron | LINC00882 | 3 | - | LOC107986021 | 3 | - |
| intron-exon | AC005225.2 | 14 | - | ACOT6 | 14 | - |
| exon-exon | LOC107985103 | | + | MIR3659HG | | + |
| exon-intron | LOC730257 | 1 | + | AC245297.3 | 1 | + |
| intron-exon | AL590483.2 | | + | LOC105373261 | | + |
| exon-intron | NRXN2 | 11 | - | ABL1 | 9 | - |
| exon-exon | KRT10 | 17 | + | KRT10 | 17 | - |
| exon-exon | SRSF11 | 1 | - | ND3 | MT | + |
| intron-exon | ASB14 | 3 | - | LOC105377102 | | + |
| exon-intron | HEBP2 | 6 | - | JMJD1C | 10 | + |
| exon-exon | HSP90B1 | 12 | - | HSP90B1 | 12 | + |
| exon-exon | CARS2 | 13 | + | GIPR | | + |
| exon-exon | H3-3A | 1 | - | H3P16 | 4 | - |
| exon-exon | MLF2 | 12 | + | OXNAD1 | 3 | + |
| exon-exon | SLC12A2 | 5 | - | ZC3H14 | 14 | + |
| intron-exon | DNAAF4-CCPG1 | 15 | + | SIRT3 | 11 | - |
| exon-intron | SENP3-EIF4A1 | 17 | - | DNAH12 | 3 | - |
| exon-exon | ATP1B1 | 1 | + | NME7 | 1 | - |
| exon-exon | TSN | 2 | - | TSN | 2 | + |
| exon-exon | CD59 | 11 | + | CD59 | 11 | - |
| exon-exon | SREK1 | 5 | - | ND2 | MT | + |
| intron-exon | ND6 | MT | - | CELF1 | 11 | - |
| exon-exon | GDA | 9 | - | GDA | 9 | + |
| exon-exon | SAP18 | 13 | - | SAP18 | 13 | + |
| exon-exon | MCCC2 | | - | MCCC2 | 5 | + |
| exon-intron | CEP126 | 11 | - | TRPC6 | 11 | - |
| exon-exon | HERC1 | 15 | + | ND5 | MT | + |
| exon-exon | ND2 | MT | - | KPNB1 | 17 | + |
| exon-exon | ATP6 | MT | - | KDM6A | X | + |
| exon-exon | IL1RN | 2 | - | IL1RN | 2 | + |
| intron-exon | SNX16 | 8 | - | ND1 | MT | + |
| intron-exon | SLC9C1 | | + | INAVA | | + |
| intron-exon | DCBLD1 | 6 | + | GOPC | 6 | - |
| exon-exon | COA1 | 7 | - | STK17A | 7 | + |
| exon-exon | AQP3 | 9 | + | GTF2IP1 | 7 | - |
| exon-exon | SPOCK3 | 4 | + | S100A11 | 1 | - |
| exon-exon | HSP90B1 | 12 | - | HSP90B1 | 12 | + |
| exon-exon | PTTG1IP | 21 | + | PTTG1IP | 21 | - |
| exon-exon | SUPT7L | 2 | - | GPN1 | 2 | + |
| exon-exon | RPS5 | 19 | - | RPS5 | 19 | + |
| exon-intron | ILRUN | 6 | + | SORBS2 | 4 | + |
| intron-exon | STK17A | 7 | + | COA1 | 7 | - |
| intron-exon | PPP2R5A | 1 | + | RPL23A | 17 | + |
| exon-intron | RPL36P5 | | + | LOC105378660 | | + |
| exon-exon | UBQLN2 | X | - | UBQLN2 | X | + |
| exon-exon | CYTB | MT | - | PRDX1 | 1 | - |
| exon-exon | SPPL2A | 15 | + | SPPL2A | 15 | - |
| exon-exon | ATP6 | MT | - | ATP6 | MT | + |
| intron-exon | CMTM7 | 3 | - | ND2 | MT | + |
| intron-exon | TNKS2 | 10 | + | SRP9 | 1 | + |
| exon-exon | DBI | 2 | - | ND4 | MT | + |
| exon-exon | MIS18A | 21 | + | WDR48 | 3 | + |
| exon-exon | CHD2 | 15 | - | CHD2 | 15 | + |
| intron-exon | DPY19L2P1 | | - | B2M | 15 | + |
| exon-intron | ND4 | MT | - | MTND4P35 | | - |
| exon-exon | PFN2 | 3 | + | CYTB | MT | + |
| exon-exon | PAFAH1B1 | 17 | - | PAFAH1B1 | 17 | + |
| exon-exon | SUCLG1 | 2 | + | SUCLG1 | 2 | - |
| exon-exon | ZC3H11A | 1 | - | ZC3H11A | | + |
| exon-exon | IGFBP7 | 4 | + | IGFBP7 | 4 | - |
| exon-exon | FAM118B | | + | SRPRA | 11 | - |
| exon-intron | CPSF2 | 14 | - | ANKFY1 | 17 | + |
| intron-exon | ZNF805 | 19 | - | ZNF264 | 19 | - |
| exon-intron | ZNF28 | 19 | - | CPSF6 | 12 | - |
| exon-exon | MOCS1 | 6 | - | DAAM2 | 6 | - |
| exon-intron | CPT1A | 11 | + | C16orf72 | 16 | - |
| intron-exon | NDUFA4P1 | 1 | - | LOC107986374 | | + |
| exon-intron | HSD11B2 | 16 | - | RPS12P22 | | - |
| exon-exon | SLC25A5 | X | - | SLC25A5 | X | + |
| exon-exon | AARS2 | 6 | + | AARS2 | 6 | - |
| exon-exon | AP2S1 | 19 | + | RNA45SN2 | 21 | - |
| exon-exon | DDHD2 | 8 | + | RPL3 | 22 | + |
| intron-exon | LOC101927178 | 14 | + | TRIM5 | 11 | + |
| exon-intron | PLEKHH1 | 14 | + | GPHN | 14 | + |
| exon-intron | LINC01229 | | + | LINC01228 | | + |
| intron-exon | TBC1D20 | 20 | + | ND1 | MT | + |
| exon-exon | COL6A1 | 21 | - | RNA45SN1 | 21 | - |
| exon-exon | RPL10P16 | 19 | + | CACNA1G | | - |
| exon-intron | H3P6 | 2 | - | MGST2 | | + |
| exon-exon | EIF3D | 22 | + | TNRC18 | 7 | + |
| exon-exon | COL3A1 | 2 | - | YWHAB | 20 | - |
| exon-exon | KPNA2 | 17 | - | LOC101929240 | 17 | + |
| exon-intron | ND6 | MT | - | VSTM2L | | - |
| exon-exon | PSMD12 | | + | CLIP4 | 2 | - |
| exon-exon | ND2 | MT | - | NEAT1 | 11 | - |
| intron-exon | CYP4Z2P | | - | CYP4B1 | 1 | - |
| intron-exon | LARP1B | 4 | + | CTSD | 11 | + |
| exon-intron | NOP58 | 2 | - | NOP58 | 2 | + |
| intron-exon | LOC100507373 | 19 | + | GGNBP2 | 17 | + |
| exon-exon | TMEM63A | 1 | - | EPHX1 | 1 | - |
| exon-exon | SKI | 1 | + | MORN1 | 1 | + |
| exon-exon | MARK3 | 14 | - | WARS1 | 14 | + |
| exon-intron | POFUT1 | 20 | - | TSBP1-AS1 | | - |
| exon-intron | ATP5ME | 4 | + | TMEM9B-AS1 | | - |
| exon-exon | ANAPC13 | 3 | + | ANAPC13 | 3 | - |
| exon-intron | ZNF252P | | - | ARHGAP39 | 8 | - |
| exon-exon | ZCCHC2 | 18 | - | ZCCHC2 | 18 | + |
| exon-exon | HSP90AA1 | 14 | + | HSP90AA1 | 14 | - |
| exon-intron | RXRA | 9 | - | LRBA | 4 | + |
| exon-intron | TALAM1 | 11 | - | ATP6 | MT | + |
| exon-exon | ADGRE5 | 19 | - | ATP2A2 | 12 | + |
| intron-exon | LOC105371723 | 17 | - | SMURF2P1-LRRC37BP1 | 17 | - |
| exon-exon | BASP1 | 5 | - | BASP1 | 5 | + |
| exon-intron | STOM | 9 | + | AC105916.1 | | + |
| exon-exon | DYNLT1 | 6 | + | DYNLT1 | 6 | - |
| exon-exon | ABCC4 | 13 | + | ND6 | MT | + |
| exon-exon | ZNF281 | 1 | + | ZNF281 | 1 | - |
| exon-exon | PLXNB2 | 22 | + | RBM25 | 14 | - |
| intron-exon | OR7E11P | 11 | + | ALDH3B1 | | + |
| intron-exon | OIP5 | 15 | - | INTS4 | 11 | - |
| exon-exon | ATP1B1 | 1 | - | ATP1B1 | 1 | + |
| exon-exon | PEBP1 | 12 | - | PEBP1 | 12 | + |
| exon-intron | DDX25 | 11 | + | LOC112267932 | 5 | + |
| exon-exon | ATP6 | MT | - | ANKRA2 | | - |
| exon-exon | RPS3 | 11 | - | RNA45SN1 | 21 | - |
| exon-exon | YPEL1 | 22 | - | PPIL2 | 22 | - |
| exon-intron | ALDH2 | 12 | - | MTMR4 | 17 | + |
| exon-exon | KLK10 | 19 | + | KLK10 | 19 | - |
| intron-exon | ND6 | MT | - | PRRC2B | 9 | - |
| exon-exon | AKTIP | 16 | - | RBL2 | 16 | - |
| exon-intron | RPL13AP25 | 13 | + | TXLNGY | Y | - |
| exon-intron | RPAIN | 17 | - | ZBTB17 | 1 | + |
| intron-exon | SLC26A5 | 7 | - | PSMC2 | 7 | + |
| exon-exon | CYB5B | 16 | - | ND4 | MT | + |
| exon-exon | ATP6V1C1 | 8 | - | ATP6V1C1 | 8 | + |
| intron-exon | ND5 | MT | - | UTP18 | 17 | + |
| intron-exon | LOC101929418 | | - | ALS2 | 2 | - |
| exon-exon | IK | 5 | - | IK | 5 | + |
| exon-exon | COX3 | MT | - | COX3 | MT | + |
| exon-exon | NQO1 | 16 | + | DYRK1A | 21 | + |
| exon-exon | MGST1 | 12 | - | MGST1 | 12 | + |
| exon-exon | USP42 | 7 | - | USP42 | 7 | + |
| exon-exon | TFPI2 | 7 | + | TFPI2 | 7 | - |
| exon-exon | PPP1R18 | 6 | + | PPP1R18 | 6 | - |
| exon-exon | CHMP2B | 3 | - | CHMP2B | 3 | + |
| exon-intron | ND2 | MT | - | UFC1 | 1 | + |
| exon-exon | ALCAM | 3 | - | ALCAM | 3 | + |
| exon-exon | RFX3 | 9 | + | RFX3 | 9 | - |
| exon-exon | ND2 | MT | - | BIRC2 | | + |
| intron-exon | STT3A-AS1 | 11 | - | EI24 | 11 | + |
| intron-exon | MED12L | 3 | + | ND2 | MT | + |
| intron-exon | SCOC | 4 | + | RPL14 | 3 | + |
| exon-intron | SESTD1 | 2 | + | SESTD1 | 2 | - |
| exon-exon | TMBIM6 | 12 | - | TMBIM6 | 12 | + |
| exon-exon | NEAT1 | 11 | - | POLR2A | 17 | + |
| exon-exon | SLC25A5 | X | - | SLC25A5 | X | + |
| intron-exon | ARHGEF2 | 1 | + | RAB6A | 11 | - |
| exon-exon | ATP6V0D1 | 16 | + | FABP7 | 6 | + |
| exon-exon | NDUFA9 | 12 | - | RNA45SN1 | 21 | - |
| exon-exon | CLDN5 | 22 | + | PTMS | 12 | + |
| exon-intron | ND4 | MT | - | REC8 | 14 | + |
| exon-intron | MIR9-3HG | 15 | - | BCAN | 1 | + |
| exon-intron | COL12A1 | 6 | + | TMC5 | 16 | - |
| exon-intron | IGKC | 2 | + | IGK | 2 | + |
| exon-exon | PUS10 | 2 | + | PIK3R4 | 3 | + |
| exon-intron | MPDU1 | 17 | - | LOC105371856 | 17 | - |
| exon-intron | LOC101927702 | 14 | + | PPM1A | 14 | + |
| exon-exon | ACACB | 12 | - | CTDSP1 | 2 | + |
| exon-exon | RPL27A | 11 | - | GTF2A1 | 14 | + |
| intron-exon | ANKDD1A | 15 | + | OSGEP | 14 | - |
| exon-exon | NISCH | 3 | - | ND2 | MT | + |
| exon-exon | NR1H2 | 19 | - | NR1H2 | 19 | + |
| exon-exon | POLR2E | 19 | + | UBC | 12 | - |
| exon-exon | PSMB7 | 9 | + | ZFP36 | 19 | + |
| exon-exon | RPL18 | 19 | + | ETFB | 19 | - |
| exon-exon | RAB31 | 18 | - | COX2 | MT | + |
| exon-intron | NBEAL1 | 2 | - | RIN2 | 20 | - |
| exon-exon | CD74 | 5 | + | CBX1 | 17 | - |
| intron-exon | EEF1A1P11 | 1 | - | SLC6A4 | 17 | - |
| exon-exon | PSME1 | 14 | - | IQCE | 7 | + |
| exon-exon | TGM2 | 20 | + | DDX17 | 22 | - |
| exon-exon | BCAP31 | X | + | RPL41 | 12 | + |
| intron-exon | JAM3 | 11 | + | PFN1 | 17 | - |
| exon-exon | ND2 | MT | - | MCEMP1 | 19 | + |
| exon-exon | FAU | 11 | + | MRPL16 | 11 | - |
| exon-exon | ND2 | MT | - | SFTPC | 8 | + |
| exon-exon | MLF2 | 12 | + | TP53 | 17 | - |
| exon-intron | ND2 | MT | - | SEMA3C | 7 | - |
| exon-exon | ND2 | MT | - | OLFML2A | 9 | + |
| intron-exon | CDC16 | 13 | - | ND4 | MT | + |
| exon-exon | ND2 | MT | - | RAD17 | 5 | + |
| exon-exon | ATP6 | MT | - | PFN1 | 17 | + |
| intron-exon | SMOC1 | 14 | + | RPL19 | 17 | + |
| exon-intron | DPH2 | 1 | - | LOC106099063 | 11 | + |
| exon-exon | JUN | 1 | + | LARP4B | 10 | + |
| exon-intron | TNS3 | 7 | + | TNS3 | 7 | - |
| exon-exon | AGAP3 | 7 | - | TP53I11 | 11 | + |
| exon-exon | NPRL3 | 16 | + | RNA45SN3 | 21 | - |
| exon-exon | IFI27L2 | 14 | + | SEPTIN9 | 17 | - |
| exon-exon | SDC3 | 1 | + | SDC3 | 1 | - |
| exon-exon | ARNT | 1 | + | CRISPLD2 | 16 | - |
| intron-exon | LOC101928343 | 17 | - | COL1A2 | 7 | - |
| exon-intron | SLC26A11 | 17 | - | RNA18SP5 | 21 | - |
| exon-exon | TPP1 | 11 | + | PNN | 14 | - |
| exon-exon | C1S | 12 | - | SPARC | 5 | + |
| intron-exon | ABL1 | 9 | - | RNA45SN2 | 21 | - |
| exon-exon | PMF1-BGLAP | 1 | - | DDX42 | 17 | - |
| intron-exon | RERE | 1 | - | NEAT1 | 11 | - |
| exon-exon | PPDPF | 20 | - | RNA45SN1 | 21 | - |
| exon-exon | SEC31A | 4 | + | ARPC5 | 1 | + |
| exon-intron | ND2 | MT | - | CTB-30L5.1 | 7 | - |
| exon-exon | TAF2 | 8 | + | TAF2 | 8 | - |
| exon-exon | ND1 | MT | - | XIST | X | + |
| exon-intron | IL27RA | 19 | - | ACAP2 | 3 | + |
| exon-exon | LYZ | 12 | - | HINT3 | 6 | - |
| exon-exon | PEBP1 | 12 | - | PEBP1 | 12 | + |
| exon-exon | CHD4 | 12 | + | CHD4 | 12 | - |
| exon-exon | RPL36AL | 14 | + | ND5 | MT | - |
| exon-exon | MT2A | 16 | - | MRPS18C | 4 | + |
| exon-exon | RBPJ | 4 | - | RBPJ | 4 | + |
| exon-exon | BSPRY | 9 | - | PA2G4P2 | 20 | + |
| exon-exon | PSAP | 10 | + | SFTPA2 | 10 | - |
| exon-exon | H2BC15 | 6 | - | TGFBI | 5 | - |
| exon-exon | S100A11 | 1 | + | ZFP36L2 | 2 | + |
| intron-exon | SRP19 | 5 | + | HTATSF1P2 | 6 | + |
| intron-exon | AC005154.5 | 7 | + | LOC100287825 | 7 | + |
| exon-intron | CAPN12 | 19 | - | LOC107985291 | 19 | - |
| exon-intron | LOC100506123 | 2 | + | AC159540.2 | 2 | + |
| intron-exon | LOC105371574 | 17 | + | CAP1 | 1 | - |
| exon-exon | FAUP1 | 18 | + | CCND1 | 11 | - |
| exon-exon | MAP4 | 3 | + | MAP4 | 3 | - |
| exon-exon | MIR12136 | 1 | - | COL6A3 | 2 | + |
| exon-intron | S100A6 | 1 | + | LOC100129096 | 8 | - |
| exon-exon | ND4 | MT | - | ND5 | MT | - |
| exon-exon | COX3 | MT | - | RNA45SN2 | 21 | + |
| exon-exon | KIF24 | 9 | - | UBAP1 | 9 | - |
| exon-exon | TM9SF2 | 13 | - | TM9SF2 | 13 | + |
| exon-exon | DHRS4L2 | 14 | - | DHRS4 | 14 | - |
| exon-exon | APP | 21 | + | SFTPA2 | 10 | - |
| exon-intron | PSAP | 10 | + | MTATP6P1 | 1 | + |
| exon-exon | SFTPB | 2 | + | ERP27 | 12 | - |
| intron-exon | ND6 | MT | - | PYGO2 | 1 | - |
| intron-exon | NCKAP1L | 12 | - | OCLN | 5 | + |
| exon-exon | METRN | 16 | - | NR4A1 | 12 | + |
| exon-intron | MAFK | 7 | + | FAT3 | 11 | - |
| exon-exon | COX3 | MT | - | RPS3 | 11 | + |
| exon-exon | SFTPB | 2 | + | ND6 | MT | + |
| exon-exon | ND2 | MT | - | ARF1 | 1 | + |
| exon-exon | LOC102724737 | 15 | + | RPS8P10 | 15 | + |
| exon-exon | SLC12A6 | 15 | - | EMC4 | 15 | - |
| exon-exon | HSPA5 | 9 | + | MED19 | 11 | - |
| exon-exon | NEURL2 | 20 | - | SPATA25 | 20 | - |
| exon-exon | SLC3A2 | 11 | + | RNA45SN1 | 21 | + |
| intron-exon | ASIC4-AS1 | 2 | + | GMPPA | 2 | + |
| exon-intron | PGAM1 | 10 | + | CAMK2B | | - |
| exon-exon | DLGAP4 | 20 | + | LOC100996724 | | - |
| exon-intron | STAR | 8 | - | MAP7 | 6 | - |
| exon-exon | SYNPO | 5 | + | TCOF1 | 5 | + |
| exon-intron | RPS29 | 14 | - | LOC107984701 | | - |
| exon-exon | APP | 21 | - | MALAT1 | 11 | + |
| intron-exon | AP2B1 | 17 | - | PEX12 | | - |
| exon-intron | HSD17B14 | | - | CZ1P-ASNS | 7 | - |
| exon-intron | SERPINB9 | 6 | - | TRNAU1AP | 1 | + |
| intron-exon | SHC4 | 15 | + | EID1 | 15 | + |
| exon-exon | CD74 | 5 | - | RNA45SN2 | 21 | + |
| exon-exon | COX7C | 5 | + | ARHGEF4 | 2 | + |
| exon-exon | DYNLL1 | 12 | + | BAG3 | 10 | + |
| intron-exon | LOC101928847 | 11 | + | NCAM1 | 11 | + |
| intron-exon | AL132671.2 | | - | ROS1 | 6 | - |
| exon-exon | RNU6-2 | 19 | + | CIRBP | 19 | + |
| exon-intron | SLC12A9 | 7 | + | TRIP6 | 7 | + |
| exon-exon | NCOR2 | 12 | - | RPS21 | 20 | - |
| exon-exon | KDM5B | 1 | - | OXR1 | 8 | + |
| intron-exon | PLEKHA7 | 11 | - | CD47 | 3 | - |
| intron-exon | SHC4 | 15 | + | EID1 | 15 | + |
| intron-exon | FADS2 | 11 | - | FADS1 | 11 | - |
| exon-exon | PTMAP2 | 5 | + | TUBA1B | 12 | - |
| exon-exon | PFN1 | 17 | - | RNA45SN2 | 21 | + |
| exon-exon | UBA52 | 19 | + | SUGP2 | 19 | - |
| exon-exon | CLDN11 | 3 | + | KCNMB4 | 12 | + |
| exon-exon | HSP90AB1 | 6 | + | NAPEPLD | 7 | - |
| intron-exon | RFNG | 17 | + | GPS1 | 17 | + |
| exon-exon | REXO2 | 11 | + | MPHOSPH8 | 13 | + |
| exon-exon | FAM107A | 3 | - | COX2 | MT | + |
| exon-exon | TMEM126B | 11 | + | GRIA4 | 11 | + |
| exon-exon | PRDX2 | 19 | - | RNA45SN2 | 21 | + |
| exon-exon | DNAJA2 | 16 | - | ARID1A | 1 | + |
| exon-exon | MYBBP1A | 17 | - | MAP4K4 | 2 | + |
| exon-exon | ELOVL1 | 1 | - | NFASC | 1 | + |
| exon-exon | ATG13 | 11 | + | FMNL2 | 2 | + |
| exon-intron | TMSB4X | X | + | RIPOR3 | 20 | - |
| exon-exon | S100A1 | 1 | + | ND1 | MT | + |
| exon-intron | CALM2 | 2 | - | CABIN1 | 22 | + |
| exon-exon | CKB | 14 | - | RNA45SN1 | 21 | + |
| exon-intron | ATP5IF1 | 1 | - | DNAJC8 | 1 | - |
| exon-exon | DSP | 6 | - | DSP | 6 | + |
| exon-exon | RNF111 | 15 | - | RNF111 | 15 | + |
| exon-exon | JCHAIN | 4 | - | CBFA2T2 | 20 | + |
| exon-intron | DCT | 13 | - | DMD | X | - |
| exon-exon | RPL38 | 17 | + | PHF20 | 20 | + |
| exon-intron | SUSD1 | 9 | - | AC244205.1 | 2 | - |
| exon-exon | VIPR1 | 3 | + | SCIN | 7 | + |
| intron-exon | SMG6 | 17 | - | DSG2 | 18 | + |
| exon-exon | ZNF646 | 16 | - | ZNF668 | 16 | - |
| exon-exon | HSP90AA2P | 11 | - | ARHGAP32 | 11 | - |
| exon-intron | NOLC1 | 10 | + | ARL15 | 5 | + |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | MCM3 | 6 | - | FOXP4 | 6 | + |
| exon-intron | HSPH1 | 13 | - | NTN1 | 17 | + |
| exon-intron | CIRBP | 19 | + | OBSCN | 1 | + |
| exon-intron | MCM6 | 2 | - | NBAS | 2 | - |
| intron-exon | LOC105375404 | 7 | + | CASD1 | 7 | + |
| exon-exon | MANEAL | 1 | + | C1RL-AS1 | 12 | + |
| exon-exon | TMSB4X | X | + | RPL26P6 | | - |
| exon-exon | ZNF559 | 19 | + | ZNF177 | 19 | + |
| exon-exon | DDAH2 | 6 | - | TTC7B | 14 | - |
| exon-exon | ELOF1 | 19 | - | KIF1A | 2 | - |
| intron-exon | LOC101929538 | | + | FLI1 | 11 | + |
| intron-exon | LOC100996723 | 1 | - | SEC22B | 1 | - |
| exon-intron | NCK2 | 2 | + | AC009505.1 | 2 | + |
| intron-exon | STOML2 | 9 | - | TWNK | 10 | + |
| exon-exon | FAT4 | 4 | + | ACTA2 | 10 | - |
| exon-intron | AP4M1 | 7 | + | LOC101928042 | 15 | + |
| exon-intron | CDKN2AIPNL | 5 | - | SKP1 | 5 | - |
| exon-exon | CTNNB1 | 3 | + | OLFML2B | 1 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | MED1 | 17 | - | EEF1A1P5 | 9 | + |
| exon-exon | CLIC1 | 6 | - | ND4 | MT | + |
| intron-exon | CDK17 | 12 | - | ADGRG6 | 6 | + |
| exon-exon | B2M | 15 | + | SOGA1 | 20 | - |
| exon-exon | RPL11 | 1 | + | ELOA | 1 | + |
| intron-exon | PIGK | 1 | + | RPL17P39 | 15 | - |
| intron-exon | LOC105375402 | | + | GNG11 | | + |
| exon-exon | LOC105375725 | 8 | + | MAL2 | 8 | + |
| exon-exon | ERBB3 | 12 | + | RREB1 | 6 | + |
| exon-intron | SEPTIN2 | 2 | + | RNR2 | MT | + |
| exon-exon | DHRS2 | 14 | + | PDPK2P | 16 | - |
| exon-exon | NCBP1 | 9 | + | ECT2 | 3 | + |
| exon-exon | AFP | 4 | + | SORT1 | 1 | - |
| exon-exon | DDX19A | 16 | + | APOB | 2 | - |
| exon-exon | SLC16A1 | 1 | - | UGT2B10 | 4 | + |
| exon-exon | SMAD5 | 5 | + | EEF1A1P5 | 9 | + |
| exon-exon | TRIB3 | 20 | + | NADK2 | 5 | - |
| exon-exon | CANX | 5 | + | PLPP3 | 1 | - |
| exon-exon | HSP90AA1 | 14 | - | DHX38 | 16 | + |
| exon-intron | CES1 | 16 | - | MACROH2A2 | 10 | + |
| exon-exon | TXNRD1 | 12 | + | RNF185 | 22 | + |
| exon-exon | CCNB1IP1 | 14 | - | RASGRF2 | 5 | + |
| exon-exon | PHKB | 16 | + | CASTOR2 | 7 | + |
| exon-exon | SCD | 10 | + | LRIG1 | 3 | - |
| exon-exon | MRS2 | 6 | + | HMGB1 | 13 | - |
| exon-exon | LOC107986531 | 6 | + | CMTR1 | 6 | + |
| exon-exon | HOXC6 | | + | HOXC9 | 12 | + |
| exon-exon | RRP15 | 1 | + | HYOU1 | 11 | - |
| exon-exon | H2BC21 | 1 | - | PFDN6 | 6 | + |
| exon-exon | CUX1 | 7 | + | GNAS | 20 | + |
| exon-intron | H2BC21 | 1 | - | PLEKHA7 | 11 | - |
| exon-intron | GNL2 | 1 | - | RNF216 | 7 | - |
| exon-exon | KCNJ9 | 1 | + | RNA45SN2 | 21 | + |
| exon-intron | SGTA | 19 | - | PSMF1 | 20 | + |
| exon-exon | CALM2 | 2 | - | SECISBP2L | 15 | - |
| exon-intron | PRKAR2A | 3 | - | SHISA5 | 3 | - |
| exon-exon | TSC22D2 | 3 | + | TSC22D2 | 3 | - |
| exon-exon | CYCS | 7 | - | MARCHF4 | 2 | + |
| intron-exon | NSFP1 | 17 | + | NSF | 17 | + |
| exon-exon | PARGP1 | 10 | - | PARGP1-AGAP4 | 10 | - |
| exon-intron | SARAF | 8 | - | LOC107985080 | | - |
| exon-exon | HERC1 | 15 | - | SH3PXD2A | 10 | - |
| exon-intron | YWHAB | 20 | + | FRMD4A | 10 | - |
| exon-intron | TSPAN7 | X | + | ADGRA3 | 4 | - |
| exon-exon | ACTR2 | 2 | + | RPSA | 3 | + |
| exon-exon | RPL4P4 | 3 | - | RNA45SN2 | 21 | + |
| exon-exon | TXN2 | 22 | - | NDUFB1 | | - |
| exon-exon | USF1 | 1 | - | SUPT7L | 2 | - |
| exon-intron | TNNC1 | | - | RNR2 | MT | + |
| exon-exon | TAGLN2 | 1 | - | C1S | 12 | + |
| exon-exon | LOC112694756 | 16 | + | RNA45SN1 | 21 | + |
| exon-exon | MYL2 | 12 | - | RNA45SN2 | 21 | + |
| intron-exon | MEA1 | 6 | + | PPP2R5D | 6 | + |
| exon-exon | MDH2 | 7 | + | RNA45SN1 | 21 | + |
| exon-exon | CMYA5 | 5 | + | RPL23AP2 | 19 | + |
| exon-intron | ANKRD1 | 10 | - | ATP8B5P | 9 | + |
| exon-exon | S100A1 | 1 | + | MAT2B | 5 | + |
| exon-exon | MYH7 | 14 | - | UBBP1 | 2 | - |
| exon-exon | ATP5F1A | 18 | - | MYL12A | 18 | + |
| exon-exon | ANKRD1 | 10 | - | CAV1 | 7 | + |
| exon-intron | RPL26 | 17 | - | MVP | 16 | - |
| exon-intron | NPC2 | 14 | - | RNA18SP5 | 21 | + |
| intron-exon | ZNF721 | 4 | - | PUS7L | | - |
| exon-exon | RPS3 | 11 | + | C7orf31 | 7 | - |
| intron-exon | CCDC30 | 1 | - | ZMYND12 | | - |
| exon-intron | TMEM259 | 19 | - | ATP5MF-PTCD1 | 7 | - |
| exon-exon | ITM2C | 2 | + | SLC2A5 | 1 | - |
| exon-exon | UBE2G1 | 17 | - | VAC14 | 16 | - |
| exon-exon | RAN | 12 | + | STON2 | 14 | + |
| exon-exon | CD74 | 5 | - | RNA45SN2 | 21 | + |
| exon-exon | CD74 | 5 | - | RNA45SN2 | 21 | + |
| exon-exon | CTSZ | 20 | - | RNA45SN3 | 21 | + |
| exon-exon | SRSF1 | 17 | - | PCNX1 | 14 | + |
| exon-exon | NAA10 | X | - | CD44 | 11 | + |
| exon-exon | H3-3B | 17 | - | TNIK | 3 | - |
| exon-exon | ALPI | 2 | + | RNA45SN2 | 21 | + |
| exon-intron | FABP2 | 4 | - | MBOAT2 | 2 | - |
| exon-exon | CD74 | 5 | - | SGK1 | 6 | - |
| exon-intron | TMSB4X | X | + | GPR39 | 2 | + |
| exon-exon | RPS25 | 11 | - | STK4 | 20 | + |
| exon-exon | TMEM60 | 7 | - | MORF4L1P1 | 1 | + |
| exon-exon | ATP6V0D1 | 16 | - | RPS7P1 | 17 | + |
| intron-exon | FAM172A | 5 | - | XRN2 | 20 | + |
| exon-intron | PLAAT4 | 11 | + | NRG1 | 8 | - |
| exon-intron | TOMM7 | 7 | - | ADGRE2 | 19 | - |
| exon-exon | CLSTN1 | 1 | - | RUSC2 | 9 | + |
| exon-exon | SNX12 | X | - | RMND5B | 5 | + |
| exon-exon | HOGA1 | 10 | + | RNA45SN3 | 21 | + |
| exon-exon | OTUB1 | 11 | + | RNA45SN2 | 21 | + |
| exon-exon | SERINC3 | 20 | - | RNA45SN1 | 21 | + |
| exon-exon | NCOR1 | 17 | - | RNA45SN3 | 21 | + |
| exon-exon | COASY | 17 | + | RNA45SN1 | 21 | + |
| exon-exon | DLST | 14 | + | RNA45SN1 | 21 | + |
| exon-exon | UTP3 | 4 | + | SQSTM1 | 5 | + |
| intron-exon | SMARCD3 | 7 | - | SGF29 | 16 | + |
| exon-exon | ABHD6 | 3 | + | RNA45SN1 | 21 | + |
| exon-exon | ARF6 | 14 | + | RNA45SN3 | 21 | + |
| exon-intron | CYSTM1 | 5 | + | RNA28SP | 21 | + |
| exon-exon | CRYL1 | 13 | - | ATPAF1 | 1 | - |
| exon-exon | METTL21A | 2 | - | CD151 | 11 | + |
| exon-exon | FABP3 | 1 | - | UBL3 | 13 | - |
| exon-exon | LINC01730 | 20 | + | AP5S1 | 20 | + |
| exon-intron | RAP1GAP | | - | KAZN | 1 | + |
| exon-exon | GAPDH | 12 | + | NUFIP2 | 17 | - |
| intron-exon | PIF1 | 15 | + | PLEKHO2 | 15 | + |
| exon-exon | RPL11 | 1 | + | ELOA | 1 | + |
| exon-exon | RPSA | 3 | + | PXK | 3 | + |
| exon-exon | PITHD1 | 1 | + | TPCN1 | 12 | + |
| exon-exon | RPL24 | 3 | - | WDR59 | 16 | - |
| intron-exon | SASS6 | 1 | + | TRMT13 | 1 | + |
| exon-exon | RPL28 | 19 | + | ALDOA | 16 | + |
| exon-exon | FTH1 | 11 | - | RNA45SN3 | 21 | + |
| exon-exon | PSMA5 | 1 | - | USF1 | 1 | - |
| exon-exon | SLC2A6 | 9 | - | WDR90 | 16 | + |
| exon-exon | SF3B1 | 2 | - | MAN2B1 | 19 | - |
| intron-exon | COL1A2 | 7 | + | MYO1C | 17 | - |
| exon-exon | AKAP8L | 19 | - | FGFR1 | 8 | - |
| exon-exon | MYD88 | 3 | + | MYLK | 3 | - |
| exon-exon | ACTB | 7 | - | THBS3 | 1 | - |
| exon-intron | MYH9 | 22 | - | CHCHD3 | 7 | - |
| exon-exon | C1R | 12 | - | MYD88 | 3 | + |
| exon-exon | SPATS2L | 2 | + | LOXL4 | 10 | - |
| exon-exon | RBMS2 | 12 | + | EIF4EBP2 | 10 | + |
| exon-exon | ADAMTS1 | 21 | - | C1S | 12 | + |
| exon-exon | IGFBP4 | 17 | + | DCN | 12 | - |
| exon-exon | P4HB | 17 | - | UBE2E3 | 2 | + |
| exon-intron | TASOR | 3 | - | TAB3P1 | | - |
| exon-exon | NDUFS6 | 5 | + | NFE2L2 | 2 | - |
| exon-intron | MT1X | 16 | + | EMC3 | 3 | + |
| exon-intron | SEC62 | 3 | + | FUBP3 | 9 | + |
| exon-intron | BIVM-ERCC5 | 13 | + | KSR1 | 17 | + |
| exon-exon | GCLC | 6 | - | UBXN10 | | + |
| exon-exon | ALB | 4 | + | SERPING1 | 11 | + |
| exon-intron | LOC105374836 | 2 | + | PATL1 | 11 | - |
| exon-exon | CUL1 | 7 | + | LYZ | 12 | + |
| exon-intron | CHI3L1 | 1 | - | INMT-MINDY4 | 7 | + |
| exon-intron | MTM1 | X | + | MTCO1P12 | 1 | + |
| exon-intron | GPC4 | X | - | CSRNP3 | 2 | + |
| exon-intron | CHIT1 | | - | LOC105371723 | 17 | + |
| intron-exon | SHC4 | 15 | + | EID1 | 15 | + |
| intron-exon | WDFY1 | 2 | + | MRPL44 | | + |
| exon-intron | CCL22 | | + | ABHD3 | 18 | + |
| exon-intron | TAPBP | 6 | - | LUC7L | 16 | - |
| exon-exon | GPI | 19 | + | HDAC8 | X | - |
| intron-exon | BPNT2 | 8 | - | ND2 | MT | + |
| exon-exon | TRAK2 | 2 | - | CD68 | 17 | + |
| exon-exon | LIPA | 10 | - | CCDC90B | 11 | - |
| exon-exon | KPNB1 | 17 | + | CMC1 | 3 | + |
| exon-exon | ATP6V1G1 | 9 | + | TMBIM6 | 12 | + |
| exon-exon | IST1 | 16 | + | LOC728533 | | + |
| exon-exon | API5 | 11 | + | RHOQ | 2 | + |
| exon-intron | CACYBP | 1 | + | UHRF1 | | + |
| exon-intron | LUZP6 | 7 | - | AC015987.1 | 7 | - |
| exon-exon | CD68 | 17 | + | SH3BGRL | X | + |
| exon-exon | NOTCH2 | 1 | - | CD59 | 11 | - |
| exon-exon | NAA50 | 3 | - | CHIT1 | 1 | - |
| exon-exon | PRR13 | 12 | + | RPL8 | 8 | - |
| exon-intron | ACP5 | 19 | - | ASXL1 | 20 | + |
| intron-exon | LOC107985180 | | + | CHI3L2 | | + |
| exon-exon | PEA15 | 1 | + | GATM | 15 | - |
| exon-exon | RPL7P9 | 1 | - | TECR | | + |
| exon-exon | RPS25 | 11 | - | RPL6P27 | 18 | - |
| exon-exon | ACTB | 7 | - | RNA45SN2 | 21 | + |
| exon-exon | HSPA2 | 14 | + | RNA45SN3 | 21 | + |
| exon-exon | RNFT2 | | + | RNA45SN1 | 21 | + |
| exon-intron | LOC107986531 | 6 | + | CMTR1 | 6 | + |
| exon-intron | CD164 | 6 | - | RNR2 | MT | + |
| exon-exon | YWHAG | 7 | - | RNA45SN2 | 21 | + |
| exon-exon | TPD52L2 | | + | DNAJC5 | 20 | + |
| exon-exon | H2BC6 | 6 | + | PGM3 | 6 | - |
| exon-exon | LOC101928274 | 12 | - | VSIG10 | 12 | - |
| exon-intron | RPS29 | 14 | - | MIR325HG | | - |
| exon-intron | GLIPR2 | 9 | + | COPE | 19 | - |
| exon-intron | RAB31 | 18 | + | LOC105378260 | 21 | + |
| exon-exon | SERBP1P5 | 4 | - | ATP1A2 | 1 | + |
| exon-exon | APLP2 | 11 | + | HDHD2 | 18 | - |
| exon-intron | FABP4 | 8 | - | PMP22 | 17 | - |
| exon-intron | UBTD1 | 10 | + | VPS36 | 13 | + |
| exon-intron | COX7A1 | 19 | - | LINC00621 | 13 | - |
| exon-exon | NDUFS5 | 1 | + | ATP6 | MT | + |
| exon-exon | EIF4G1 | 3 | + | SLC2A11 | | - |
| exon-exon | DPYD | 1 | - | COX5B | 2 | + |
| exon-intron | RPS12 | 6 | + | SMYD3 | 1 | - |
| exon-exon | SP100 | 2 | + | SUCLG1 | 2 | - |
| exon-exon | PRG2 | 11 | - | RNA45SN2 | 21 | + |
| exon-exon | HSPB8 | 12 | + | RNA45SN1 | 21 | + |
| exon-exon | ZFYVE27 | 10 | + | RNA45SN1 | 21 | + |
| exon-exon | DUSP1 | 5 | - | RNA45SN1 | 21 | + |
| exon-exon | RAD23A | 19 | + | H19 | 11 | - |
| exon-exon | HLA-E | 6 | + | RNA45SN1 | 21 | + |
| exon-exon | IFI6 | 1 | - | TNRC18 | 7 | - |
| exon-intron | GDF15 | 19 | + | RNA18SP5 | 21 | + |
| intron-exon | STAG1 | 3 | - | PLCD3 | 17 | - |
| exon-intron | TMEM132A | 11 | + | RNA28SP | 21 | + |
| exon-exon | TRAPPC1 | 17 | - | RNA45SN3 | 21 | + |
| exon-exon | BCL2L12 | 19 | + | RNA45SN1 | 21 | + |
| exon-exon | GDF15 | 19 | + | RNA45SN3 | 21 | + |
| exon-exon | KISS1 | 1 | - | RNA45SN1 | 21 | + |
| exon-intron | KRT18 | 12 | + | RNA18SP5 | 21 | + |
| exon-intron | EIF3F | 11 | + | RNA18SP5 | 21 | + |
| exon-exon | LAPTM4A-DT | | - | LAPTM4A | 2 | - |
| exon-intron | GPNMB | 7 | + | RNA18SP5 | 21 | + |
| exon-exon | EIF3F | 11 | + | RNA45SN1 | 21 | + |
| exon-exon | RPS12 | 6 | + | CPA1 | 7 | + |
| exon-exon | CPA1 | 7 | + | ATP6 | MT | + |
| exon-exon | CTRB2 | 16 | - | RNA45SN1 | 21 | + |
| exon-exon | PRSS1 | 7 | + | RNA45SN1 | 21 | + |
| intron-exon | TUBGCP3 | 13 | - | PLA2G1B | 12 | - |
| exon-exon | CD24 | 6 | - | RNA45SN2 | 21 | + |
| exon-exon | PRSS2 | 7 | + | RNA45SN1 | 21 | + |
| exon-intron | PRSS2 | 7 | + | MAP3K3 | 17 | + |
| exon-exon | PNLIPRP1 | 10 | + | PKD1P3-NPIPA1 | 16 | + |
| exon-intron | STK26 | | + | NPLOC4 | 17 | - |
| exon-exon | EIF4G3 | 1 | - | LAPTM4A | 2 | - |
| exon-exon | CCIN | 9 | + | TBRG1 | 11 | + |
| exon-exon | TAX1BP1 | 7 | - | HIBADH | | - |
| exon-exon | KRT5 | 12 | - | PACS1 | 11 | + |
| intron-exon | KHDC4 | 1 | - | MBP | 18 | - |
| exon-exon | HIF1A | 14 | + | CD63 | 12 | - |
| exon-intron | PYGB | 20 | + | LOC105373831 | | - |
| exon-exon | LOC107986838 | 7 | + | CAV2 | | + |
| exon-intron | PNISR | 6 | - | UGGT1 | 2 | + |
| exon-intron | SMR3B | 4 | + | MAGI1 | 3 | - |
| exon-exon | HTN3 | 4 | + | RPL6P27 | 18 | - |
| exon-intron | RPS23 | 5 | - | WWOX | 16 | + |
| intron-exon | SRPK2 | 7 | - | CST2 | | - |
| exon-intron | STATH | 4 | + | CLDN10 | 13 | - |
| exon-intron | HTN3 | 4 | + | RIMS1 | 6 | + |
| exon-intron | RPL14 | 3 | + | SENP6 | 6 | + |
| exon-intron | CHCHD5 | 2 | + | AC012442.2 | 2 | + |
| exon-exon | HTN1 | | + | MUC7 | 4 | + |
| exon-exon | STATH | 4 | + | HTN3 | 4 | + |
| exon-intron | CD44 | 11 | + | INPP5F | 10 | - |
| exon-exon | MMADHC-DT | 2 | - | MMADHC | 2 | - |
| exon-intron | RAB13 | 1 | - | WBP1L | 10 | - |
| exon-exon | LTBP3 | 11 | - | ARPC2 | 2 | + |
| intron-exon | LOC102724687 | 8 | + | RRS1 | | + |
| exon-exon | CD74 | 5 | - | RNA45SN1 | 21 | + |
| exon-exon | IMP3 | 15 | - | MTHFD1L | 6 | + |
| exon-exon | VPS28 | 8 | - | RNA45SN3 | 21 | + |
| exon-exon | RPS16 | 19 | - | RNA45SN1 | 21 | + |
| exon-exon | ACTB | 7 | - | RNA45SN1 | 21 | + |
| exon-exon | KCTD9 | 8 | - | FERMT2 | 14 | - |
| exon-exon | YWHAE | 17 | - | LIPF | 10 | + |
| exon-exon | PGA3 | 11 | + | PGA4 | 11 | + |
| exon-exon | RAPGEF4 | 2 | + | PGA3 | 11 | + |
| exon-exon | TPM4 | 19 | + | SORBS2 | 4 | - |
| intron-exon | THNSL1 | 10 | - | PRTFDC1 | 10 | - |
| exon-exon | PGA3 | 11 | + | PGA4 | 11 | + |
| exon-exon | PGA4 | 11 | + | PGA5 | 11 | + |
| exon-exon | NPM1 | 5 | + | IK | 5 | + |
| exon-exon | MDM4 | 1 | + | SRGAP3 | 3 | - |
| intron-exon | AC025188.1 | | + | F2R | 5 | + |
| exon-exon | SNHG29 | 17 | + | NCALD | 8 | - |
| exon-exon | KIF3A | 5 | - | FTL | 19 | + |
| exon-intron | DDX24 | 14 | - | MEG3 | 14 | + |
| exon-exon | CDC42EP4 | 17 | - | RNA45SN3 | 21 | + |
| exon-exon | CDKAL1 | 6 | + | CNNM4 | 2 | + |
| exon-exon | DPYSL2 | 8 | + | NFU1 | 2 | - |
| exon-exon | NME1 | 17 | + | NME2 | 17 | + |
| exon-intron | ALPP | 2 | + | ALPG | | + |
| exon-exon | MRPS28 | 8 | - | ARFGEF1 | 8 | - |
| exon-exon | RPS21 | 20 | - | LAMA5 | 20 | - |
| intron-exon | LOC112679202 | | - | ABO | | - |
| exon-intron | SNRPB2 | 20 | + | CPPED1 | 16 | + |
| exon-exon | GTF3C5 | 9 | + | CYTB | MT | + |
| exon-exon | UBXN1 | 11 | - | RPL12 | 9 | - |
| exon-intron | OS9 | 12 | + | PLEKHA7 | 11 | - |
| exon-exon | ADCK2 | 7 | + | MAP2K4 | 17 | + |
| exon-exon | ILF2 | 1 | - | ND5 | MT | + |
| exon-exon | LAPTM4A-DT | | - | LAPTM4A | 2 | - |
| exon-exon | EIF1AXP1 | 1 | - | COX1 | MT | + |
| exon-intron | CDC20B | 5 | - | CDH12 | 5 | - |
| exon-exon | TIMMDC1 | 3 | + | RNA45SN1 | 21 | - |
| exon-exon | UTP18 | 17 | + | HSPA8 | 11 | - |
| exon-intron | SPATA33 | 16 | + | AC010538.1 | 16 | + |
| intron-exon | AC005993.1 | 14 | + | RGS6 | 14 | + |
| exon-exon | CFL1 | 11 | - | BLOC1S5-TXNDC5 | 6 | - |
| exon-exon | APLP2 | 11 | + | MAD1L1 | 7 | - |
| intron-exon | LOC111946250 | | - | CTNNA3 | | - |
| exon-exon | PLP1 | X | + | GRIA3 | X | + |
| exon-exon | MAT2A | 2 | + | CNTN2 | 1 | + |
| exon-exon | SLC7A5P2 | 16 | - | SMG1P3 | 16 | - |
| exon-exon | H2BC6 | 6 | + | NPC1 | 18 | - |
| exon-exon | UNC50 | 2 | + | UBA6 | 4 | - |
| exon-exon | BMS1 | 10 | + | NUCKS1 | 1 | - |
| exon-exon | CASD1 | 7 | + | COX14 | 12 | + |
| exon-intron | GAPDH | 12 | + | UHRF1BP1 | 6 | + |
| exon-exon | RNF26 | 11 | + | RNA45SN3 | 21 | + |
| exon-exon | UBE2D3 | 4 | - | ARPC5 | 1 | - |
| exon-exon | OXSR1 | 3 | + | SASH1 | 6 | + |
| intron-exon | LOC111982879 | | + | RPP30 | | + |
| exon-intron | NDUFV1 | 11 | + | CD72 | 9 | + |
| exon-exon | SOD2 | 6 | + | ACAT2 | 6 | + |
| intron-exon | PMPCA | 9 | - | ENTR1 | 9 | - |
| exon-exon | LOC105371406 | 1 | + | FCGR1A | 1 | + |
| intron-exon | LOC101927020 | 6 | - | CRISP2 | 6 | - |
| exon-intron | PRM2 | 16 | - | LOC105371082 | 16 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| intron-exon | ZWILCH | 15 | - | RPL4 | 15 | - |
| exon-exon | LPP | 3 | + | CPPED1 | 16 | - |
| exon-intron | ZCCHC17 | 1 | + | TTC1 | 5 | - |
| intron-exon | ZWILCH | 15 | - | RPL4 | 15 | - |
| intron-exon | GJA9-MYCBP | 1 | - | RRAGC | 1 | - |
| intron-exon | ZWILCH | 15 | - | RPL4 | 15 | - |
| exon-exon | ACTB | 7 | - | RNA45SN3 | 21 | + |
| exon-intron | HACL1 | 3 | - | AGTPBP1 | | + |
| exon-intron | CALM2 | 2 | - | DANT2 | X | - |
| exon-exon | UQCRQ | 5 | + | ATP5F1A | 18 | - |
| exon-exon | FXYD6-FXYD2 | 11 | - | RNA45SN2 | 21 | + |
| exon-exon | SMPD1 | 11 | + | TRPC4 | 13 | - |
| exon-exon | RPS12 | 6 | + | EEF1A1 | 6 | - |
| exon-intron | TXNL4B | 16 | - | DHODH | 16 | - |
| intron-exon | INS-IGF2 | 11 | - | COL12A1 | 6 | - |
| exon-intron | MTRES1 | | + | ST6GALNAC3 | 1 | + |
| exon-intron | ATP5MPL | 14 | - | CTNNA1 | 5 | - |
| exon-exon | RPL31 | 2 | + | HNRNPC | 14 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-intron | NDUFA2 | 5 | - | SLC9A5 | 16 | - |
| exon-exon | KCNAB2 | 1 | + | PDLIM7 | 5 | - |
| exon-intron | SDCBP | 8 | + | TOX | | + |
| exon-intron | HSP90AA1 | 14 | - | MS4A6A | 11 | - |
| exon-exon | BCHE | 3 | - | SLC35E3 | 12 | + |
| exon-exon | SSR3 | 3 | - | UBA3 | 3 | - |
| exon-exon | RAB1B | 11 | + | SETD6 | 16 | + |
| intron-exon | LOC105375402 | | + | GNG11 | | + |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-intron | PNRC1 | 6 | + | AF130359.1 | 21 | + |
| intron-exon | SHC4 | 15 | + | EID1 | 15 | + |
| exon-exon | MMD | | - | FAT3 | 11 | + |
| exon-exon | FAT1 | 4 | - | SPARC | 5 | - |
| exon-intron | LRP11 | 6 | - | NUP155 | 5 | + |
| exon-exon | APMAP | 20 | + | BTF3 | 5 | + |
| exon-exon | FAS | | - | N4BP3 | | + |
| intron-exon | LOC105373722 | | - | RPL15 | 3 | + |
| exon-exon | CREM | 10 | - | SEC61G | 7 | - |
| exon-exon | SELENOS | 15 | + | PPY | 17 | - |
| intron-exon | STX8 | 17 | + | CAPZB | 1 | - |
| exon-intron | FOS | 14 | - | AMBRA1 | 11 | - |
| intron-exon | APP | 21 | - | ND2 | MT | + |
| exon-exon | TRIM41 | 5 | + | PPY | 17 | - |
| exon-exon | DCAF16 | 4 | + | GPX1 | | - |
| exon-exon | SAA1 | 11 | - | CRIP2 | 14 | + |
| intron-exon | ATP11A | 13 | - | RPS28P7 | | + |
| exon-exon | IDS | X | + | PAIP2 | 5 | + |
| exon-exon | ND1 | MT | - | GNAS | 20 | + |
| exon-exon | RPL27A | 11 | - | RPS21 | 20 | + |
| exon-exon | TXNIP | 1 | - | YY1 | 14 | - |
| intron-exon | SORCS2 | 4 | - | COX3 | MT | + |
| intron-exon | SH3BP5 | 3 | - | IAPP | 12 | + |
| exon-exon | ATP6V1G2-DDX39B | 6 | + | PPY | 17 | - |
| exon-exon | RBP4 | 10 | + | EEF1A1 | 6 | - |
| exon-exon | EEF1B2P6 | | + | FAU | 11 | - |
| intron-exon | SLCO1A2 | 12 | - | RPL13P12 | 17 | - |
| exon-intron | EEF1A1P5 | 9 | - | ARL14EPL | 5 | - |
| exon-intron | OSMR | 5 | + | ZNF443 | | - |
| exon-exon | IFI30 | 19 | - | CRYBA2 | 2 | - |
| exon-exon | PRDX3 | 10 | + | COX3 | MT | + |
| exon-intron | PTMS | 12 | + | LOC105369632 | 12 | + |
| exon-exon | ND3 | MT | - | RGCC | | + |
| exon-exon | USP14 | 18 | - | CHGA | 14 | + |
| exon-exon | SSR1 | 6 | + | PSMA1 | 11 | - |
| exon-exon | ATG12 | 5 | + | SLC17A5 | 6 | - |
| intron-exon | ITPR3 | 6 | + | EEF1A1 | 6 | - |
| exon-exon | SCG5 | 15 | - | HBA1 | 16 | + |
| exon-intron | EP300 | 22 | + | ZNF677 | 19 | - |
| exon-exon | PPY | 17 | + | HBA2 | 16 | + |
| exon-exon | RPS3 | 11 | + | RPL19 | 17 | + |
| intron-exon | SLCO1A2 | 12 | - | PPY | 17 | - |
| intron-exon | PDLIM1 | 10 | + | PPP1CB | 2 | + |
| exon-exon | ARHGEF1 | 19 | - | CRIP2 | 14 | + |
| exon-exon | RUNDC3A | 17 | - | DDX51 | 12 | - |
| exon-exon | JUNB | 19 | + | IAPP | 12 | + |
| intron-exon | ZCCHC7 | | + | ATOX1 | 5 | - |
| exon-exon | HLA-B | 6 | + | PSMB3 | 17 | + |
| exon-intron | HSP90AA1 | 14 | + | OSBPL1A | 18 | - |
| exon-exon | IAPP | 12 | + | HP1BP3 | 1 | - |
| exon-exon | PTPRN | 2 | + | GNAS | 20 | + |
| exon-exon | PLPP3 | 1 | - | PHPT1 | 9 | + |
| exon-intron | GYPC | | - | NEDD8-MDP1 | 14 | - |
| exon-exon | TM4SF1 | 3 | + | RPL6 | 12 | - |
| exon-intron | DPP7 | | - | SHOC2 | 10 | - |
| exon-intron | APLP2 | 11 | - | PLEKHA7 | 11 | - |
| exon-intron | RPL3 | 22 | + | RGPD4 | 2 | + |
| exon-intron | MYEF2 | 15 | - | LINC01491 | | - |
| intron-exon | LINC02240 | | - | EEF1A1P5 | 9 | + |
| exon-intron | EMP1 | 12 | - | CACNA2D1 | 7 | - |
| exon-intron | MDH2 | 7 | + | TMEM184C | 4 | + |
| intron-exon | ANKS1B | 12 | + | SCARB2 | 4 | - |
| exon-exon | SHISAL2B | | - | NPM1 | 5 | + |
| exon-exon | TBCB | 19 | + | LOC728554 | 5 | + |
| exon-exon | SQSTM1 | 5 | - | RPS17 | 15 | - |
| exon-exon | PFN2 | 3 | - | ND4 | MT | + |
| exon-exon | PRMT2 | 21 | - | RPS14 | 5 | + |
| exon-intron | IGHM | 14 | + | PIK3R1 | 5 | + |
| exon-exon | LINC02593 | | + | CCL26 | | - |
| exon-intron | LGALS9 | 17 | + | SLC7A6 | 16 | + |
| exon-exon | ATP8 | MT | + | H3P6 | 2 | + |
| intron-exon | UBR3 | 2 | - | SYT7 | 11 | - |
| exon-exon | RPL13AP5 | 10 | - | FUCA1 | 1 | - |
| exon-exon | RPS8 | 1 | + | ZNF263 | 16 | + |
| exon-exon | ALDH9A1 | 1 | + | PSAP | 10 | - |
| exon-exon | TPT1P4 | | + | RPLP2 | 11 | + |
| intron-exon | SCAPER | 15 | + | TPT1 | 13 | - |
| exon-exon | DBI | 2 | - | BCKDHB | 6 | + |
| exon-intron | IAPP | 12 | + | MANBA | | - |
| exon-exon | MPLKIP | 7 | - | RPS17 | 15 | - |
| intron-exon | RNR2 | MT | - | RPL41 | 12 | + |
| exon-exon | C11orf96 | 11 | - | RPL30 | 8 | - |
| exon-exon | POLR3A | | + | RPLP1 | 15 | + |
| intron-exon | FTLP3 | 20 | + | SCG2 | 2 | - |
| exon-exon | LGMN | 14 | + | VCAN | 5 | + |
| exon-exon | EEF1A1P6 | 7 | - | PPY | 17 | - |
| exon-intron | TTR | 18 | + | EIF3H | 8 | + |
| intron-exon | ZNF850 | 19 | - | CPE | 4 | + |
| exon-exon | CGGBP1 | 3 | + | ACTN4 | 19 | + |
| exon-exon | EEF1G | 11 | + | TOX2 | 20 | + |
| exon-exon | FTL | 19 | - | MIF-AS1 | | + |
| exon-exon | FN1 | 2 | + | CD52 | 1 | + |
| exon-exon | CNTNAP1 | 17 | + | CHST10 | 2 | - |
| exon-exon | MRPS21 | 1 | - | DAP | 5 | - |
| exon-exon | MYO1B | 2 | + | PLEKHG1 | 6 | + |
| exon-exon | CCNI | 4 | + | RPL41 | 12 | + |
| exon-exon | NFYC | 1 | - | RPLP2 | 11 | + |
| exon-exon | ACTB | 7 | + | RPL3P4 | 14 | - |
| exon-exon | RPL13AP20 | | - | MFSD2B | | + |
| exon-exon | RPS3A | 4 | - | RPS29 | 14 | - |
| exon-exon | SUGP2 | 19 | - | EIF4G2 | 11 | - |
| exon-exon | RRBP1 | 20 | + | ATP6 | MT | + |
| intron-exon | WAC | 10 | + | B2M | 15 | + |
| exon-exon | FRG1CP | 20 | + | ND1 | MT | + |
| exon-exon | COX1 | MT | + | RPL35A | 3 | + |
| exon-exon | SNRNP25 | 16 | + | COPS4 | 4 | + |
| exon-exon | PAM | 5 | - | RPL23A | 17 | + |
| exon-exon | TEAD2 | 19 | + | PPY | 17 | - |
| exon-exon | SERF2-C15ORF63 | 15 | - | RPL37P2 | 11 | - |
| exon-exon | TSC22D3 | X | + | ELAPOR1 | 1 | + |
| exon-exon | CD74 | 5 | - | ASCC2 | 22 | - |
| intron-exon | THOC1 | 18 | - | METTL14 | | + |
| exon-intron | FAM20C | 7 | + | ITPR2 | 12 | - |
| exon-exon | UBC | 12 | - | TSTD3 | 6 | + |
| exon-exon | CLSTN1 | 1 | + | SLC7A2 | 8 | + |
| exon-exon | PTGES2 | 9 | - | CREB3L4 | 1 | + |
| exon-exon | METRNL | 17 | - | TMCC1 | 3 | - |
| exon-intron | VMP1 | 17 | - | RNR2 | MT | + |
| exon-exon | CRTAM | 11 | + | LRRC25 | | - |
| exon-exon | SEZ6L | 22 | + | GGA2 | 16 | - |
| exon-exon | PPY | 17 | - | LARP6 | 15 | - |
| exon-intron | SCAF11 | 12 | + | RNF145 | 5 | - |
| exon-exon | SQSTM1 | 5 | - | HIPK2 | 7 | - |
| intron-exon | NDE1 | 16 | + | RN7SK | 6 | - |
| exon-exon | KDM5A | 12 | + | MED11 | 17 | + |
| intron-exon | PFKP | 10 | - | FAM210B | 20 | + |
| exon-exon | SUCLA2 | 13 | - | FAAP20 | 1 | - |
| exon-intron | ZNF772 | 19 | - | PKD1P3-NPIPA1 | 16 | - |
| exon-exon | RNA45SN1 | 21 | + | SPPL2B | 19 | + |
| exon-exon | EZR | 6 | - | SYTL3 | 6 | - |
| intron-exon | USP12 | | - | HGSNAT | 8 | + |
| exon-exon | GSN | 9 | - | STXBP5-AS1 | | - |
| exon-exon | ND3 | MT | - | ARHGAP11A-SCG5 | | + |
| exon-exon | SRRD | | + | ABHD15 | | - |
| exon-intron | COX1 | MT | + | BACE1 | 11 | - |
| exon-intron | GRSF1 | 4 | - | RUFY3 | 4 | - |
| exon-exon | HLA-E | 6 | + | APOLD1 | 12 | + |
| intron-exon | HSDL1 | 16 | + | RIOK3 | 18 | - |
| intron-exon | PGR-AS1 | 11 | + | GCNT2 | 6 | + |
| exon-exon | APH1B | 15 | - | ERP29 | 12 | + |
| exon-exon | HMGB2 | 4 | + | DHRS13 | | - |
| exon-intron | FAM131A | 3 | + | IGK | 2 | - |
| intron-exon | CMC1 | 3 | + | MKLN1 | 7 | + |
| intron-exon | DMTN | 8 | - | PKN2 | 1 | + |
| intron-exon | ARHGAP32 | 11 | + | LARP4 | 12 | + |
| intron-exon | ANAPC10 | 4 | - | HHIP | 4 | - |
| intron-exon | RAP1A | 1 | - | PPTC7 | 12 | - |
| exon-intron | IGKV4-1 | 2 | + | IGKC | 2 | - |
| intron-exon | MAP3K13 | 3 | - | MYOZ3 | | + |
| exon-intron | CD81 | 11 | - | TRAV8-4 | 14 | + |
| intron-exon | SEC31A | 4 | + | ARFGAP1 | 20 | + |
| exon-intron | EIF2AK2 | 2 | - | GPATCH11 | | - |
| intron-exon | MCU | 10 | + | ARHGAP1 | 11 | - |
| exon-exon | FBLIM1 | 1 | + | AKIP1 | 11 | + |
| exon-exon | ND3 | MT | - | SET | 9 | + |
| exon-intron | RNA45SN1 | 21 | + | UBA2 | 19 | + |
| exon-intron | COX1 | MT | - | IGKV4-1 | 2 | + |
| exon-exon | BLCAP | 20 | - | ADAM15 | 1 | + |
| intron-exon | SGIP1 | 1 | - | SEC31B | 10 | - |
| exon-exon | OSBP | 11 | - | SRRM1 | 1 | + |
| intron-exon | RNR2 | MT | + | SNHG29 | 17 | + |
| exon-exon | COX2 | MT | + | PCBP1 | 2 | + |
| exon-intron | IGLV1-40 | 22 | + | IGL | 22 | + |
| exon-exon | CDK2AP2 | 11 | + | IGHA1 | 14 | - |
| exon-exon | RNA45SN2 | 21 | + | RBFOX2 | 22 | - |
| exon-intron | IGKV1-16 | | - | IGK | 2 | - |
| exon-exon | DEFA5 | 8 | - | ND1 | MT | + |
| exon-exon | CXCL14 | 5 | + | COX3 | MT | + |
| exon-exon | COL4A1 | 13 | + | COL4A1 | 13 | - |
| intron-exon | NUP98 | 11 | - | ANTXR1 | 2 | + |
| exon-exon | CCDC32 | 15 | - | CBX3 | 7 | + |
| exon-exon | LOC107987097 | 9 | - | KIAA0100 | 17 | - |
| exon-exon | TOMM70 | 3 | - | STMN2 | 8 | + |
| exon-intron | ADAMDEC1 | 8 | + | LOC101929294 | 8 | - |
| intron-exon | NRL | 14 | - | TMSB4X | X | + |
| exon-exon | ND4 | MT | - | REG1A | 2 | + |
| intron-exon | AC079150.2 | | - | EEF1A1 | 6 | - |
| intron-exon | CSRP3-AS1 | | + | E2F8 | | - |
| intron-exon | BRINP3 | 1 | - | NARS1 | 18 | - |
| exon-intron | IGKV3-20 | 2 | - | IGK | 2 | - |
| intron-exon | KALRN | 3 | + | MAX | 14 | - |
| exon-intron | DEFA6 | | + | ST6GAL1 | 3 | + |
| exon-intron | IGKV4-1 | 2 | + | IGK | 2 | - |
| exon-exon | SH3BP4 | 2 | + | SRSF1 | 17 | - |
| intron-exon | SPG11 | 15 | - | GNAS | 20 | + |
| exon-intron | DEFA5 | 8 | + | GAS5 | 1 | - |
| intron-exon | RNR2 | MT | - | EEF1G | 11 | - |
| exon-intron | TMEM140 | 7 | + | AC083862.3 | | + |
| intron-exon | RNR2 | MT | + | BCL2L11 | 2 | + |
| intron-exon | SH3D19 | 4 | + | HNRNPA1 | 12 | + |
| exon-intron | ND3 | MT | - | GABPB1 | 15 | - |
| intron-exon | C7 | 5 | + | DEFA6 | 8 | - |
| exon-exon | CDC20 | 1 | + | PIP4K2B | 17 | - |
| intron-exon | IGH | 14 | - | IGHG2 | 14 | - |
| exon-exon | EIF3M | 11 | + | PPIE | 1 | + |
| exon-exon | B2M | 15 | + | RACK1 | 5 | + |
| exon-intron | COX1 | MT | + | FAM117B | 2 | + |
| exon-exon | RPS20 | 8 | - | CFD | 19 | + |
| exon-exon | ND4 | MT | + | HBE1 | 11 | + |
| exon-exon | NPM1 | 5 | + | ALDH1A2 | 15 | - |
| exon-exon | GPX1 | 3 | - | RPL3P4 | 14 | - |
| exon-exon | EEF1A1 | 6 | - | PTP4A2 | 1 | + |
| exon-exon | LOC105375056 | 6 | + | CALCOCO2 | 17 | + |
| exon-exon | MACROH2A1 | 5 | - | ZNF788P | 19 | + |
| exon-exon | NCOA5 | 20 | - | RPL41P1 | 20 | - |
| exon-exon | MRPL30 | 2 | + | LOC107987272 | 19 | + |
| exon-exon | DDX21 | 10 | + | SPATS2L | 2 | - |
| exon-exon | NUCB2 | 11 | + | IMPA2 | 18 | + |
| exon-intron | ATP6AP1 | X | + | DGKI | 7 | + |
| exon-exon | UQCRFS1 | 19 | - | RPS20P11 | 2 | - |
| exon-exon | ZNF207 | 17 | + | G3BP1 | 5 | - |
| exon-exon | PCNA | 20 | - | RPL7A | 9 | + |
| exon-exon | PYURF | 4 | + | NDUFA9 | 12 | + |
| exon-exon | COPG1 | 3 | + | RPS4X | X | - |
| exon-exon | CD81 | 11 | + | B2M | 15 | + |
| exon-exon | RPS16 | 19 | - | GAPDH | 12 | + |
| exon-exon | ALG6 | 1 | + | GNAS | 20 | + |
| exon-exon | S100A11 | 1 | - | AK2 | 1 | - |
| intron-exon | TUBA1B | 12 | - | EIF2S3 | X | - |
| intron-exon | MTATP6P1 | 1 | + | FBXO25 | 8 | + |
| exon-exon | RBL2 | 16 | + | RNF24 | 20 | - |
| exon-exon | COTL1 | 16 | - | G6PC3 | 17 | + |
| exon-exon | UGP2 | 2 | + | CSE1L | 20 | + |
| exon-exon | SIMC1 | 5 | + | MCM4 | 8 | + |
| exon-exon | GNAS | 20 | + | EIF3FP3 | 2 | + |
| exon-exon | CD59 | 11 | - | THUMPD3-AS1 | 3 | - |
| exon-exon | ELP4 | 11 | + | MRPL9 | 1 | + |
| exon-exon | EIF4G2 | 11 | - | DDX17 | 22 | + |
| exon-exon | RACK1 | 5 | - | CDK5RAP3 | 17 | + |
| exon-exon | ORC6 | 16 | + | CST7 | 20 | + |
| exon-exon | ATIC | 2 | + | RPLP0 | 12 | - |
| exon-exon | YBX1P2 | 7 | + | FTH1P8 | X | + |
| exon-exon | ND5 | MT | + | ANAPC1 | 2 | - |
| exon-exon | HIPK2 | 7 | - | NAP1L1 | 12 | + |
| exon-exon | HBG1 | 11 | - | GTF2IP20 | 1 | - |
| exon-exon | PFKP | 10 | + | STRAP | 12 | + |
| exon-exon | RPL7P9 | 1 | + | RSL24D1 | 15 | - |
| exon-intron | DCAF7 | 17 | + | KIF6 | 6 | + |
| intron-exon | AC022966.2 | | + | RPL9P29 | | + |
| exon-exon | NME6 | 3 | - | UBE2R2 | 9 | + |
| intron-exon | IQGAP2 | 5 | + | CCDC32 | 15 | - |
| exon-intron | GRK3 | 22 | + | TRMU | 22 | + |
| exon-exon | CD3G | 11 | + | SEPHS1 | 10 | - |
| exon-exon | RPL6P27 | 18 | - | HDAC2 | 6 | + |
| exon-exon | LDHB | 12 | - | CYTB | MT | + |
| exon-exon | PNRC2 | 1 | + | FNDC10 | 1 | - |
| exon-exon | MXD4 | 4 | - | PSMC4 | 19 | + |
| exon-exon | RNU2-1 | 17 | - | DDX50 | 10 | + |
| intron-exon | CCDC200 | 17 | - | CTCF | 16 | + |
| exon-exon | H3C2 | 6 | - | ETFB | 19 | - |
| intron-exon | AC003988.1 | | - | LOC107986743 | | - |
| exon-exon | CELF2 | 10 | + | CCNH | 5 | - |
| exon-exon | ATP6 | MT | - | NORAD | 20 | + |
| exon-exon | SOCS3 | 17 | + | GTF2IP1 | 7 | - |
| exon-exon | PLA2G15 | 16 | - | APBB2 | 4 | + |
| exon-exon | SET | 9 | - | SET | 9 | + |
| exon-exon | SERPINH1 | 11 | - | TPI1 | 12 | - |
| exon-exon | PLEC | 8 | + | LARP7 | 4 | - |
| intron-exon | TNFRSF1B | 1 | - | DPH5 | 1 | - |
| exon-exon | CATSPER2 | 15 | + | PPIP5K1P1 | 15 | + |
| exon-intron | CNN2 | 19 | - | WAC | 10 | - |
| exon-intron | UBE2I | 16 | - | PRSS23 | 11 | + |
| intron-exon | AC098614.3 | 3 | - | PDCD6IP | 3 | - |
| intron-exon | WDR47 | 1 | - | TRIM16 | 17 | + |
| intron-exon | LRRC37A2 | 17 | + | IL1RAP | 3 | - |
| exon-intron | SEC63 | 6 | + | LRRC39 | 1 | - |
| exon-exon | TNRC6C | 17 | + | TMC6 | 17 | + |
| exon-exon | GARS1 | 7 | - | WAPL | 10 | + |
| exon-exon | MAP4K4 | 2 | - | MAP4K4 | 2 | + |
| exon-exon | SBSN | 19 | + | GSPT2 | X | - |
| exon-intron | TBC1D20 | 20 | + | FN1 | 2 | + |
| exon-exon | ATP6 | MT | - | ND5 | MT | - |
| exon-exon | C4orf48 | 4 | - | NCOA3 | 20 | - |
| exon-intron | S100A6 | 1 | + | ANAPC2 | 9 | + |
| exon-exon | SEMA4G | 10 | + | COX1 | MT | - |
| exon-exon | EIF4G1 | 3 | - | MCC | 5 | - |
| exon-exon | FKBP2 | 11 | - | TRIM8 | 10 | - |
| exon-exon | YIPF2 | 19 | - | C19orf44 | 19 | + |
| exon-exon | RBM10 | X | - | UBC | 12 | + |
| exon-exon | RPL13AP5 | 10 | - | BTRC | 10 | - |
| intron-exon | CHCHD3 | 7 | + | CTSB | 8 | + |
| exon-exon | SPACA6 | 19 | - | SRGN | 10 | - |
| exon-exon | LAPTM4A | 2 | + | CLSTN1 | 1 | + |
| exon-exon | UBE2M | 19 | + | PKDCC | 2 | - |
| exon-intron | DNASE2 | 19 | + | TBC1D22A | 22 | + |
| intron-exon | FAM13A | 4 | - | ZDBF2 | 2 | - |
| exon-intron | LEP | 7 | - | LOC105377030 | 3 | + |
| intron-exon | LOC110011217 | 11 | + | CERCAM | 9 | - |
| exon-intron | AFF1-AS1 | 4 | + | AFF1 | 4 | + |
| exon-exon | RPL38 | 17 | - | CGA | 6 | - |
| exon-exon | RBM6 | 3 | - | CDK6 | 7 | + |
| exon-exon | RTN4 | 2 | + | COX2 | MT | - |
| exon-intron | LOC100506123 | 2 | + | AC159540.2 | 2 | + |
| exon-intron | LOC105374898 | 6 | + | THBS3-AS1 | 1 | + |
| exon-intron | UQCR11 | 19 | + | ATP8B3 | 19 | + |
| exon-exon | COPRS | 17 | + | RNA45SN2 | 21 | - |
| intron-exon | ELL3 | 15 | - | PDIA3 | 15 | - |
| exon-exon | SRP14 | 15 | + | C1orf198 | 1 | + |
| exon-exon | YIPF2 | 19 | - | CARM1 | 19 | - |
| intron-exon | SLC37A3 | 7 | - | LRRC57 | 15 | + |
| exon-intron | SAFB2 | 19 | + | DDX17 | 22 | + |
| exon-exon | SEPTIN9 | 17 | - | HNRNPA3P6 | 3 | - |
| exon-intron | TNFSF10 | 3 | + | PTP4A1 | 6 | - |
| exon-intron | ALDH9A1 | 1 | + | LOC100133091 | 7 | - |
| exon-exon | UBA52 | 19 | - | MYH11 | 16 | - |
| exon-exon | SFTPC | 8 | - | SFTPC | 8 | + |
| exon-exon | RPS27A | 2 | - | S100A4 | 1 | - |
| exon-exon | FAM136A | 2 | + | COL3A1 | 2 | + |
| exon-exon | RBBP6 | 16 | - | VWF | 12 | - |
| exon-exon | TRMT112 | 11 | + | BEAN1 | 16 | + |
| intron-exon | MTND1P23 | 1 | - | LAMC1 | 1 | + |
| exon-exon | SENP3-EIF4A1 | 17 | - | SCARB2 | 4 | + |
| exon-exon | ACBD3 | 1 | + | PPP4C | 16 | + |
| exon-exon | RPL13AP25 | 13 | + | GPATCH8 | 17 | + |
| intron-exon | LOC101930100 | 21 | + | LOC101927345 | 21 | + |
| exon-exon | PSMD7 | 16 | - | EZR | 6 | + |
| exon-intron | HS6ST2 | X | + | USP26 | X | + |
| exon-intron | LOC100190986 | 16 | + | NPIPB4 | 16 | + |
| intron-exon | LOC105373177 | X | + | AHNAK | 11 | + |
| exon-exon | POLE3 | 9 | + | LRRC58 | 3 | + |
| exon-exon | DKK3 | 11 | + | EVA1A | 2 | + |
| exon-intron | CSH1 | 17 | + | C19orf47 | 19 | + |
| exon-exon | RAB11B | 19 | - | SLC5A6 | 2 | + |
| intron-exon | APBB2 | 4 | - | TRIM25 | 17 | - |
| exon-exon | TAOK2 | 16 | - | WDTC1 | 1 | - |
| exon-exon | SAT1 | X | - | FNDC3B | 3 | - |
| exon-exon | CSH1 | 17 | + | MLXIP | 12 | - |
| intron-exon | FTX | X | + | LAPTM4A | 2 | + |
| exon-intron | CSH2 | 17 | + | LOC100419845 | 19 | - |
| exon-exon | FAM13C | 10 | - | PHYHIPL | 10 | - |
| intron-exon | PPARD | 6 | - | NID1 | 1 | + |
| exon-intron | CREBL2 | 12 | - | SYNJ1 | 21 | + |
| exon-exon | ADRM1 | 20 | - | NRP2 | 2 | - |
| exon-exon | TLN1 | 9 | + | RBM27 | 5 | - |
| exon-intron | ND1 | MT | - | FCSK | 16 | + |
| exon-exon | RPL13AP25 | 13 | + | CHORDC1 | 11 | + |
| exon-exon | SNX32 | 11 | + | PCBP2 | 12 | - |
| exon-exon | LOC112268155 | 15 | - | ABHD2 | 15 | + |
| intron-exon | OTULINL | 5 | + | OTULINL | 5 | - |
| intron-exon | AC113414.1 | 5 | + | LOC105377700 | 5 | + |
| exon-exon | NGRN | 15 | - | PID1 | 2 | + |
| exon-exon | CADM3 | 1 | - | SRRM4 | 12 | - |
| exon-exon | RPS24 | 10 | - | CLASP1 | 2 | + |
| exon-exon | SNX5 | 20 | + | RALGAPA2 | 20 | + |
| exon-intron | BASP1 | 5 | - | SNX29 | 16 | - |
| exon-exon | ANO8 | 19 | + | NDRG4 | 16 | + |
| intron-exon | SMIM15-AS1 | 5 | + | LINC02057 | 5 | + |
| exon-intron | STOM | 9 | + | CAMSAP1 | 9 | + |
| exon-intron | DSE | 6 | - | LOC100130987 | 11 | + |
| exon-exon | CYTB | MT | - | MUC12 | 7 | - |
| exon-intron | ZNF496 | 1 | + | NKAIN4 | 20 | + |
| exon-exon | DMTN | 8 | - | PSAP | 10 | + |
| exon-exon | TAPT1-AS1 | 4 | + | NCL | 2 | + |
| exon-exon | RPS20 | 8 | + | ANP32B | 9 | + |
| intron-exon | ND6 | MT | - | COX1 | MT | + |
| exon-exon | ND1 | MT | - | NDUFB2 | 7 | + |
| intron-exon | SNX6 | 14 | + | ZC3H13 | 13 | + |
| exon-exon | SRRM2 | 16 | - | SRRM2 | 16 | + |
| intron-exon | IGH | 14 | + | IGHA1 | 14 | + |
| exon-intron | LYZ | 12 | - | GLRB | 4 | + |
| exon-exon | LOC105369388 | 11 | - | SLCO2B1 | 11 | - |
| intron-exon | ND6 | MT | - | COX1 | MT | - |
| intron-exon | RACK1 | 5 | - | LYZ | 12 | - |
| intron-exon | SUCLA2 | 13 | + | NUDT15 | 13 | + |
| exon-exon | ABCF3 | 3 | - | DNAH2 | 17 | + |
| intron-exon | GXYLT2 | | - | ND1 | MT | + |
| exon-intron | PCF11 | 11 | + | LOC100506282 | 11 | - |
| intron-exon | LOC107986991 | 9 | - | MARCHF8 | | - |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-intron | CCNB1IP1 | 14 | - | SZT2 | 1 | + |
| exon-intron | LINC01534 | | - | ZNF567 | | - |
| exon-exon | SUSD3 | 9 | - | SUSD3 | 9 | + |
| exon-exon | LINC00682 | | - | ARL5A | 2 | - |
| exon-exon | SAPCD2 | 9 | - | RPL30P4 | 3 | - |
| intron-exon | ARF1 | 1 | + | TMEM120B | 12 | + |
| exon-exon | H3P47 | | + | H3P6 | 2 | + |
| exon-exon | FKBP1C | 6 | + | ADAR | 1 | - |
| intron-exon | RAB3GAP2 | 1 | + | MORF4L1P1 | 1 | + |
| intron-exon | IGH | 14 | - | IGHM | 14 | - |
| exon-intron | SLC25A36 | | + | SAE1 | 19 | - |
| exon-intron | TAGLN2P1 | | - | OXR1 | 8 | - |
| exon-intron | RPS3AP5 | | + | PTCHD1-AS | X | + |
| exon-intron | ADCK2 | 7 | + | TBC1D5 | 3 | - |
| exon-intron | NCL | 2 | - | SRL | 16 | + |
| intron-exon | IGH | 14 | - | IGHG2 | 14 | - |
| intron-exon | AC022182.1 | 8 | + | CLVS1 | 8 | + |
| exon-intron | TMEM138 | 11 | + | DTNB | 2 | - |
| exon-intron | RPL10P16 | 19 | - | MRTFA | 22 | + |
| exon-intron | ABCF1 | 6 | + | BCL2L2-PABPN1 | 14 | + |
| exon-exon | RPL41P1 | 20 | + | PKM | 15 | - |
| intron-exon | TMEM243 | | + | RPS6 | 9 | - |
| exon-intron | RNU6-3P | X | - | HNRNPUL1 | 19 | + |
| intron-exon | SORBS2 | 4 | + | CKB | 14 | - |
| intron-exon | IGH | 14 | - | IGHG2 | 14 | - |
| intron-exon | FRAT2 | | + | LOC105378448 | | + |
| intron-exon | IGH | 14 | - | IGHG2 | 14 | - |
| exon-exon | RPL3P2 | 6 | + | FKBP8 | 19 | - |
| intron-exon | PMS2P3 | 7 | - | POM121C | 7 | - |
| exon-exon | TUFM | 16 | - | RPS9 | 19 | + |
| exon-exon | RNF40 | 16 | + | TUFM | 16 | - |
| exon-exon | CLSTN1 | 1 | + | CLSTN1 | 1 | - |
| intron-exon | IGH | 14 | - | IGHG2 | 14 | - |
| exon-intron | RPS2 | 16 | - | LOC105369710 | | - |
| exon-exon | RPL10 | X | + | RPL10 | X | - |
| intron-exon | RPL13AP5 | 10 | + | SFSWAP | 12 | + |
| exon-intron | RPS6 | 9 | - | SCNN1B | | + |
| exon-intron | LOC728613 | 5 | - | SDHAP3 | | - |
| exon-exon | MAN2A2 | 15 | + | TMEM235 | | + |
| exon-intron | CFD | 19 | + | LINC00370 | | - |
| exon-exon | MAP7D1 | 1 | + | MAP7D1 | 1 | - |
| exon-intron | TMCO5A | 15 | + | LINC02345 | 15 | + |
| exon-exon | SCGB3A1 | 5 | - | TMEM39B | 1 | + |
| intron-exon | PDE1C | 7 | + | PPP1R17 | | + |
| exon-intron | STAG3L5P | 7 | + | PILRB | 7 | + |
| exon-exon | ZFYVE21 | 14 | + | BIN1 | 2 | - |
| exon-intron | JAKMIP1 | 4 | - | CNTNAP3 | | - |
| exon-exon | UBE2Q2P2 | 15 | + | GOLGA6L9 | 15 | + |
| intron-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-exon | RPS16 | 19 | + | TOMM5 | | - |
| exon-exon | PANX1 | 11 | + | SLC7A5 | 16 | - |
| exon-intron | HMGN2 | 1 | + | SV2C | | - |
| exon-intron | HSP90AB1 | 6 | + | EXOC6B | 2 | + |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-intron | IGKV2D-30 | 2 | + | IGKC | 2 | - |
| exon-exon | SLC25A6 | Y | - | SPCS2 | 11 | + |
| intron-exon | MICOS10 | 1 | - | AKT1 | 14 | - |
| exon-exon | HMGA2 | 12 | + | ELAC2 | 17 | - |
| exon-intron | TFPI2 | 7 | - | LOC105369466 | 11 | - |
| exon-exon | LINC01006 | 7 | - | LOC105375599 | 7 | - |
| exon-intron | DDA1 | 19 | + | RPS8 | 1 | + |
| exon-intron | LOC105374974 | 6 | - | AL035401.1 | 6 | - |
| exon-exon | IGHJ3 | 14 | - | IGHA1 | 14 | - |
| exon-exon | VSIG1 | X | + | RPS3 | 11 | + |
| exon-exon | FLOT2 | 17 | - | FURIN | 15 | + |
| exon-exon | PHB | 17 | + | PHBP21 | | + |
| exon-exon | INS-IGF2 | 11 | + | MYL6 | 12 | + |
| exon-exon | MEG3 | 14 | - | MEG3 | 14 | + |
| exon-exon | COPRS | 17 | + | FAM102A | 9 | + |
| exon-intron | ND4 | MT | - | LOC105379409 | 11 | - |
| exon-exon | EML3 | 11 | + | COX1 | MT | - |
| exon-exon | TSG101 | 11 | + | SLC20A1 | 2 | - |
| exon-exon | P4HB | 17 | + | RNA45SN1 | 21 | - |
| exon-exon | COMP | 19 | + | SERPINA3 | 14 | - |
| exon-exon | COL6A1 | 21 | - | EIF3C | 16 | - |
| exon-exon | COL1A1 | 17 | + | SLC39A7 | 6 | - |
| exon-exon | HSPA1A | 6 | - | RNA45SN1 | 21 | - |
| exon-exon | CEP63 | 3 | - | GOLGB1 | 3 | + |
| exon-intron | YEATS2 | 3 | - | SIN3B | 19 | - |
| intron-exon | RALGPS1 | 9 | + | RNA45SN2 | 21 | - |
| exon-intron | FTH1P10 | 5 | + | DDX5 | 17 | + |
| exon-intron | SLC4A1 | 17 | + | ADAM11 | 17 | + |
| exon-exon | CHRDL2 | 11 | + | RNA45SN1 | 21 | - |
| exon-intron | CHI3L1 | 1 | + | NEDD4L | 18 | + |
| exon-exon | CCDC80 | 3 | + | SMTN | 22 | - |
| exon-exon | MYH9 | 22 | + | SERPINA1 | 14 | - |
| exon-intron | SPARC | 5 | + | LOC112268430 | 2 | + |
| exon-exon | SECISBP2 | 9 | - | MYH9 | 22 | + |
| exon-intron | COL2A1 | 12 | + | RNA18SP5 | 21 | - |
| exon-exon | CIZ1 | 9 | + | COL3A1 | 2 | - |
| intron-exon | NTRK2 | 9 | - | RNA45SN1 | 21 | - |
| exon-exon | PRELP | 1 | - | RNA45SN3 | 21 | - |
| exon-exon | COX3 | MT | - | ATRN | 20 | - |
| exon-exon | SERP1 | 3 | + | SRPK2 | 7 | + |
| exon-intron | COL1A1 | 17 | + | TRIT1 | 1 | - |
| exon-intron | CD81 | 11 | - | RNA28SP | 21 | - |
| exon-exon | ARF1 | 1 | - | PLCD4 | 2 | - |
| exon-exon | SERPING1 | 11 | - | RNA45SN1 | 21 | - |
| exon-exon | HTRA1 | 10 | - | KIAA0040 | 1 | + |
| exon-intron | ATP6 | MT | - | ADK | 10 | + |
| exon-exon | CILP | 15 | + | RAB11FIP4 | 17 | - |
| intron-exon | ACSF2 | 17 | + | CHST3 | 10 | - |
| intron-exon | MROH8 | 20 | + | BTBD19 | 1 | - |
| exon-intron | COL3A1 | 2 | - | RNA18SP5 | 21 | - |
| exon-exon | PDPN | 1 | - | RNA45SN3 | 21 | - |
| exon-exon | PSMD3 | 17 | - | PKM | 15 | + |
| exon-intron | CSNK1A1 | 5 | + | LOC101060145 | 13 | + |
| intron-exon | OGG1 | 3 | + | MTCH1 | 6 | + |
| exon-exon | FADS2 | 11 | - | EZR | 6 | + |
| intron-exon | LAMA5 | 20 | - | LAMA5-AS1 | | + |
| intron-exon | GPN1 | 2 | + | PRKN | 6 | + |
| exon-intron | KIF5C | 2 | - | MED13L | 12 | + |
| intron-exon | CBY1 | 22 | - | FAM71F2 | | + |
| intron-exon | DOP1B | 21 | - | MTG2 | 20 | + |
| intron-exon | LOC107983981 | 15 | + | UBE2D2 | 5 | + |
| exon-intron | PRKN | 6 | - | SUPT7L | 2 | - |
| intron-exon | ALKBH5 | 17 | + | UBR5 | 8 | - |
| exon-exon | SART1 | 11 | + | DRD4 | 11 | + |
| exon-exon | ZC3H4 | 19 | + | ZC3H4 | 19 | - |
| exon-exon | BAG6 | 6 | - | TMEM175 | 4 | + |
| intron-exon | TFPI | 2 | - | ARID1A | 1 | + |
| exon-exon | RHO | 3 | + | GALNT9 | | - |
| exon-intron | NDRG3 | 20 | - | MLLT6 | 17 | + |
| exon-exon | CLN6 | 15 | - | CHST2 | 3 | + |
| exon-exon | MKLN1 | 7 | - | MKLN1 | 7 | + |
| exon-exon | SIX3 | 2 | - | SIX3 | 2 | + |
| exon-intron | WBP1L | 10 | + | CYP17A1-AS1 | 10 | + |
| exon-intron | SLC16A1-AS1 | 1 | + | LRIG2-DT | | + |
| exon-intron | RNF115 | 1 | - | TANC2 | 17 | + |
| exon-exon | LDHA | 11 | + | LDHA | 11 | - |
| exon-exon | KPNB1 | 17 | - | KPNB1 | 17 | + |
| intron-exon | DPP6 | 7 | + | ACTR3B | | + |
| intron-exon | ATP5MPL | 14 | + | EEF1A1P5 | 9 | + |
| exon-exon | KIF11 | 10 | - | KIF11 | 10 | + |
| intron-exon | GBA | 1 | - | GBAP1 | 1 | - |
| exon-exon | TTBK2 | 15 | + | TTBK2 | 15 | - |
| exon-exon | STAT3 | 17 | + | STAT3 | 17 | - |
| exon-exon | RAB31 | 18 | + | EEF1A1 | 6 | - |
| exon-intron | CNKSR3 | 6 | - | DNAAF4-CCPG1 | 15 | + |
| intron-exon | PVT1 | 8 | + | RPA1 | 17 | + |
| exon-exon | TRA2A | 7 | - | CENPO | 2 | + |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-exon | CAPRIN1 | 11 | - | CAPRIN1 | 11 | + |
| exon-exon | HUWE1 | X | - | SNHG6 | 8 | - |
| exon-exon | MCUR1 | 6 | + | MCUR1 | 6 | - |
| exon-intron | CFLAR | 2 | + | C2CD6 | | + |
| exon-exon | GGNBP1 | 6 | - | BAK1 | 6 | - |
| exon-intron | LOC107984198 | | + | AKR1C3 | 10 | + |
| intron-exon | LINC01035 | | + | TCEA1 | 8 | - |
| exon-intron | RPL10P9 | 5 | + | SMG1 | 16 | + |
| exon-exon | PLEKHA7 | 11 | + | HNRNPUL2-BSCL2 | 11 | - |
| exon-exon | CAPZA2 | | + | ST13 | 22 | - |
| exon-exon | NKIRAS2 | 17 | - | NKIRAS2 | 17 | + |
| exon-exon | PNPO | 17 | + | RNF141 | 11 | - |
| exon-exon | ZFAS1 | 20 | - | RPS16 | 19 | - |
| exon-exon | RNF220 | 1 | + | SAP30BP | 17 | + |
| exon-intron | ATF5 | 19 | + | DGKZ | 11 | - |
| exon-exon | VCP | 9 | + | VCP | 9 | - |
| exon-exon | RPL37A | 2 | - | NRBP2 | 8 | - |
| exon-exon | TXN | 9 | - | RPL4 | 15 | - |
| intron-exon | RPL36A-HNRNPH2 | X | + | WSB1 | 17 | - |
| exon-intron | DKC1 | X | - | DYNLT1 | 6 | - |
| exon-exon | UBXN2A | 2 | + | EPB41 | 1 | + |
| exon-exon | TAF5 | 10 | - | TAF5 | 10 | + |
| exon-intron | SBNO2 | 19 | - | RABEP2 | 16 | - |
| exon-exon | RPL30 | 8 | - | KCTD18 | 2 | - |
| exon-exon | AP5M1 | 14 | - | AP5M1 | 14 | + |
| exon-exon | SSBP2 | 5 | + | SSBP2 | 5 | - |
| intron-exon | AC021573.1 | | + | C11orf49 | 11 | + |
| intron-exon | RPL15P3 | 6 | - | RPS13 | 11 | - |
| exon-intron | LOC105373907 | | + | AC013448.2 | | + |
| exon-exon | TMEM185A | X | + | APRT | 16 | - |
| intron-exon | KDM4B | 19 | + | HP1BP3 | 1 | - |
| intron-exon | RPS23P8 | X | + | RNF38 | 9 | - |
| exon-exon | NOMO1 | | + | LOC102723728 | 16 | - |
| exon-intron | GAPDH | 12 | + | IGF2R | 6 | - |
| exon-exon | RPL41P1 | 20 | - | GLRX5 | 14 | + |
| exon-exon | MDM2 | 12 | + | COMMD2 | 3 | - |
| exon-exon | CHMP1A | 16 | + | CHMP1A | 16 | - |
| exon-exon | MED23 | 6 | + | MED23 | 6 | - |
| exon-exon | LOC648987 | 5 | + | LOC648987 | 5 | - |
| exon-intron | LOC101929128 | | + | LOC105379231 | | + |
| exon-exon | FAM50A | X | - | FAM50A | X | + |
| exon-exon | RCC1 | 1 | + | ASF1B | 19 | - |
| exon-exon | SRI | 7 | - | DKK1 | 10 | + |
| exon-exon | ELOA-AS1 | 1 | - | FAF1 | 1 | - |
| exon-exon | ATOX1 | 5 | + | RPL4 | 15 | - |
| exon-exon | PLCB1 | 20 | - | PLCB1 | 20 | + |
| exon-exon | VPS35 | 16 | + | VPS35 | 16 | - |
| exon-exon | CCSER2 | 10 | + | EP300 | 22 | + |
| intron-exon | AL033528.2 | | + | PAQR7 | 1 | + |
| exon-exon | FAM178B | 2 | - | PRRG1 | X | + |
| exon-exon | RPL37A | 2 | + | PPIAP22 | 21 | + |
| exon-exon | DKK3 | 11 | + | RANBP3 | 19 | - |
| exon-exon | TMBIM6 | 12 | - | ANXA2 | 15 | - |
| exon-exon | ACTG1 | 17 | + | RPS5 | 19 | + |
| exon-exon | OST4 | 2 | + | ROR1 | 1 | + |
| exon-exon | RPL23AP42 | 3 | - | NUMA1 | 11 | - |
| exon-exon | TMEM9B | 11 | + | RMDN3 | 15 | - |
| intron-exon | LOC105376626 | | + | LOC105376627 | | + |
| intron-exon | LOC105377644 | | + | WDR26 | 1 | - |
| exon-exon | GNB1 | 1 | - | DDX50 | 10 | + |
| exon-exon | ZNF263 | 16 | - | ZNF263 | 16 | + |
| exon-exon | TEKT4P2 | 21 | - | SNX5 | 20 | - |
| exon-exon | N4BP2 | 4 | - | N4BP2 | 4 | + |
| exon-intron | LGALS1 | 22 | + | HELLS | 10 | - |
| exon-exon | FTH1 | 11 | - | FBL | 19 | - |
| exon-exon | LOC105376627 | | + | CD44 | 11 | + |
| intron-exon | Z94721.1 | 6 | - | LOC105378120 | 6 | - |
| exon-exon | PEX5 | 12 | + | PLP2 | X | + |
| exon-exon | MAZ | 16 | + | LOC112268170 | 16 | - |
| exon-intron | EEF1A1 | 6 | + | EEF1A1P13 | 5 | - |
| exon-exon | CUL3 | 2 | + | CUL3 | 2 | - |
| exon-exon | TMEM184C | 4 | + | ERAP2 | 5 | + |
| exon-exon | TUBA1B | 12 | - | SH3KBP1 | X | - |
| exon-exon | HCFC1 | X | - | HCFC1 | X | + |
| exon-exon | RBM23 | 14 | + | RBM23 | 14 | - |
| exon-intron | PTMAP9 | 12 | - | HSPD1 | 2 | - |
| exon-exon | RPS3A | 4 | + | MACIR | 5 | + |
| intron-exon | APOO | X | + | MRPS16 | 10 | - |
| exon-intron | XIAP | | + | ROR2 | | + |
| intron-exon | AC068205.1 | | + | HSD17B12 | 11 | + |
| exon-intron | ST6GALNAC5 | | + | AL035409.1 | | + |
| intron-exon | N4BP2L1 | 13 | - | BCYRN1P1 | | + |
| exon-exon | ITGB5 | 3 | - | ITGB5 | 3 | + |
| exon-exon | YY1 | 14 | - | TUBB2A | 6 | - |
| exon-intron | LOC105371453 | 1 | - | HAPLN2 | | - |
| intron-exon | ENTPD4 | 8 | - | ARF3 | 12 | - |
| exon-exon | SAPCD2 | 9 | + | SDSL | | + |
| exon-intron | DOP1B | 21 | - | RUNX1 | 21 | - |
| intron-exon | DEPTOR | 8 | - | DEPTOR | 8 | + |
| intron-exon | SF3B2 | 11 | - | IFFO2 | 1 | - |
| exon-exon | VPS35 | 16 | + | VPS35 | 16 | - |
| exon-exon | ND5 | MT | - | MYH9 | 22 | - |
| exon-exon | CYTB | MT | - | MRFAP1 | 4 | + |
| exon-exon | KRT19 | 17 | + | RNA45SN1 | 21 | - |
| exon-exon | PATJ | 1 | + | HSP90B1 | 12 | + |
| exon-exon | HSP90B1 | 12 | - | HSP90B1 | 12 | + |
| exon-exon | NONO | X | + | YWHAG | 7 | - |
| exon-exon | PDIA3 | 15 | + | MYO10 | 5 | - |
| intron-exon | LONP2 | 16 | - | NDRG4 | 16 | + |
| exon-exon | ENO1 | 1 | - | RPA1 | 17 | + |
| intron-exon | LOC105374942 | 6 | - | LOC105374943 | 6 | - |
| exon-exon | CHSY1 | 15 | + | LOC105378179 | 14 | - |
| exon-exon | ATRIP-TREX1 | 3 | - | ATRIP-TREX1 | 3 | + |
| exon-intron | UTP15 | 5 | - | EGLN3 | 14 | + |
| exon-exon | SH2B3 | 12 | + | PPFIA3 | 19 | + |
| exon-exon | CMTM7 | 3 | + | ATP6 | MT | + |
| intron-exon | PLA2G6 | 22 | - | MAP4 | 3 | + |
| intron-exon | SCRN1 | 7 | - | NONO | X | - |
| intron-exon | HELZ | 17 | - | IL36RN | 2 | + |
| exon-exon | ELOVL6 | 4 | + | ELOVL6 | 4 | - |
| exon-intron | M6PR | 12 | - | LOC105373422 | 2 | - |
| exon-exon | BRD2 | 6 | - | BRD2 | 6 | + |
| exon-exon | FUT8 | 14 | - | CDS2 | 20 | - |
| exon-intron | RRM1 | 11 | + | ST3GAL3 | 1 | - |
| exon-exon | PTPRF | 1 | + | PTPRF | 1 | - |
| exon-exon | PLS3 | X | - | HSPH1 | 13 | - |
| intron-exon | ADAM23 | 2 | + | ANKRD10 | 13 | - |
| intron-exon | AGAP1 | 2 | - | EEF1D | 8 | - |
| exon-exon | LAMC2 | 1 | + | COL3A1 | 2 | - |
| intron-exon | PPARG | 3 | + | PTMAP2 | 5 | + |
| exon-exon | SIK1B | 21 | + | SIK1B | 21 | - |
| exon-intron | GMPS | 3 | + | LINC01374 | 10 | + |
| exon-exon | DSC2 | 18 | + | DSC2 | 18 | - |
| intron-exon | GTF2IRD1 | 7 | - | NUP93 | 16 | + |
| exon-intron | SLC25A11 | 17 | + | LOC105372358 | 19 | + |
| exon-intron | NID2 | 14 | + | ZFP91-CNTF | 11 | + |
| exon-exon | HELZ | 17 | + | SPATA21 | 1 | - |
| exon-exon | SF3B2 | 11 | + | ZGPAT | 20 | - |
| intron-exon | GASK1A | 3 | - | SIN3A | 15 | - |
| exon-exon | PSMD3 | 17 | + | SORD | 15 | - |
| exon-exon | HSP90AB1 | 6 | + | PUM3 | 9 | - |
| exon-exon | SSBP4 | 19 | - | UBB | 17 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | UBR5 | 8 | + | CCT8 | 21 | + |
| exon-exon | HSP90AA2P | 11 | + | HSP90AA1 | 14 | - |
| exon-exon | HSP90AB1 | 6 | - | HSP90AB1 | 6 | + |
| exon-exon | KRT5 | 12 | + | NOMO3 | 16 | + |
| exon-exon | EEF1A2 | 20 | + | EEF1A2 | 20 | - |
| exon-exon | SCAMP5 | 15 | + | YWHAE | 17 | + |
| intron-exon | CLASRP | 19 | - | ENO2 | 12 | + |
| exon-exon | KRT8 | 12 | + | TAP2 | 6 | + |
| exon-exon | RPL4P4 | 3 | - | NPTXR | 22 | - |
| exon-exon | ND2 | MT | - | MTO1 | 6 | + |
| exon-exon | EEF1A1P5 | 9 | - | EEF1A1 | 6 | - |
| exon-exon | RPL4P5 | 9 | - | RPL4P4 | 3 | - |
| exon-exon | VDAC3 | 8 | - | ATP1A1 | 1 | + |
| exon-exon | RBM48 | 7 | - | RBM48 | 7 | + |
| exon-exon | EEF2 | 19 | + | EEF2 | 19 | - |
| exon-exon | ATP2A2 | 12 | + | EEF1A1P5 | 9 | - |
| exon-exon | F11R | 1 | + | RNA45SN2 | 21 | - |
| exon-exon | CALR | 19 | + | CALR | 19 | - |
| exon-intron | HOXC8 | 12 | - | LOC107984512 | 12 | - |
| exon-exon | OTX1 | 2 | - | OTX1 | 2 | + |
| exon-exon | PPIA | 7 | + | PPIA | 7 | - |
| exon-exon | EEF1A1P12 | 2 | - | RPL17 | 18 | + |
| exon-exon | ARHGAP23 | 17 | + | GTF2H2C | 5 | - |
| exon-exon | EIF3I | 1 | + | CHCHD2P2 | 5 | + |
| exon-intron | NOP10 | 15 | - | TXNRD1 | 12 | + |
| exon-exon | MRPL53 | 2 | - | MRPL53 | 2 | + |
| exon-exon | NME4 | 16 | + | CALR | 19 | + |
| exon-exon | NAA20 | 20 | + | NAA20 | 20 | - |
| exon-exon | P4HB | 17 | + | RPS6 | 9 | + |
| exon-exon | CD24 | 6 | - | CD24 | 6 | + |
| intron-exon | RPS4XP3 | 20 | + | AHSA1 | 14 | + |
| exon-exon | ASAP1 | 8 | - | ING5 | 2 | + |
| exon-exon | ING1 | 13 | + | ING1 | 13 | - |
| exon-exon | ATP6V0B | 1 | + | DECR1 | 8 | + |
| exon-exon | PXDN | 2 | - | PXDN | 2 | + |
| exon-exon | EIF3J | 15 | - | LAPTM4A | 2 | + |
| exon-exon | SLC25A6 | Y | - | MBTPS1 | 16 | - |
| exon-exon | POLG | 15 | + | POLG | 15 | - |
| exon-intron | SSBP1 | 7 | - | DLG5 | 10 | - |
| exon-exon | DAZAP2 | 12 | + | SELENOW | 19 | - |
| exon-exon | CRBN | 3 | - | SFMBT1 | 3 | + |
| exon-intron | PRKAG1 | 12 | - | DDN-AS1 | 12 | + |
| exon-exon | LIG3 | 17 | + | LIG3 | 17 | - |
| exon-exon | SGCG | 13 | - | SGCG | 13 | + |
| exon-exon | PRPF3 | 1 | - | PRPF3 | 1 | + |
| exon-exon | ATP11A | 13 | - | ATP11A | 13 | + |
| exon-exon | ATP1A1 | 1 | + | ATP1A1 | 1 | - |
| exon-intron | DIS3L | 15 | + | LEPR | 1 | + |
| exon-exon | ENSA | 1 | + | CDV3 | 3 | - |
| exon-exon | SMG5 | 1 | - | SMG5 | 1 | + |
| exon-exon | KRT8 | 12 | - | SGSM2 | 17 | - |
| exon-exon | LRRC59 | 17 | - | LRRC59 | 17 | + |
| exon-exon | PAPOLA | 14 | + | SORT1 | 1 | - |
| exon-exon | SCAF4 | 21 | - | SCAF4 | 21 | + |
| exon-exon | CAPN2 | 1 | - | LAPTM4A | 2 | + |
| exon-exon | ATP13A3 | 3 | - | ATP13A3 | 3 | + |
| intron-exon | ID2-AS1 | 2 | - | TUBA1C | 12 | - |
| exon-exon | MYO5B | 18 | + | GOLGA7 | 8 | - |
| exon-exon | SCARB2 | 4 | - | ESRP2 | 16 | + |
| exon-exon | HSP90B1 | 12 | - | RPF2 | 6 | - |
| exon-exon | BBX | 3 | + | OGFOD1 | 16 | + |
| exon-exon | LGALS3BP | 17 | + | PABPC1 | 8 | + |
| exon-exon | PHB | 17 | - | PHB | 17 | + |
| exon-exon | KDM3B | 5 | - | KDM3B | 5 | + |
| intron-exon | NPIPB12 | 16 | - | ABHD4 | 14 | + |
| exon-exon | GOLGA7 | 8 | + | FYTTD1 | 3 | + |
| exon-exon | SP3 | 2 | + | WASHC4 | 12 | + |
| exon-exon | ZFYVE16 | 5 | - | ZFP90 | 16 | + |
| exon-intron | DNPEP | 2 | + | WFDC21P | 17 | - |
| exon-exon | RRP1 | 21 | + | GAN | 16 | + |
| intron-exon | TAP1 | 6 | - | ZCCHC2 | 18 | - |
| exon-exon | APLP2 | 11 | + | ARHGAP21 | 10 | - |
| exon-exon | UBXN7 | 3 | + | GRN | 17 | + |
| exon-intron | ATP6 | MT | + | CSAD | 12 | - |
| exon-exon | CYTB | MT | - | CYTB | MT | + |
| intron-exon | MECP2 | X | + | SLC30A5 | 5 | + |
| exon-exon | DNAJC21 | 5 | - | TMEM106B | 7 | - |
| exon-exon | LOC101927060 | 17 | - | LOC101927060 | 17 | + |
| exon-exon | ZNF609 | 15 | + | ZNF609 | 15 | - |
| exon-exon | TPM3P8 | 2 | - | TANC2 | 17 | - |
| exon-intron | DHX29 | 5 | - | SVIL | 10 | - |
| intron-exon | NAA20 | 20 | + | CAST | 5 | + |
| intron-exon | LOC100130701 | 3 | + | CDK7 | 5 | - |
| intron-exon | MED13L | 12 | + | TMEM181 | 6 | + |
| exon-exon | C5orf24 | 5 | + | RPL23 | 17 | - |
| exon-intron | ANKRD36C | 2 | - | COMMD10 | 5 | + |
| exon-exon | KRT5 | 12 | - | KRT6B | 12 | - |
| intron-exon | SBNO2 | 19 | - | CSRNP1 | 3 | + |
| intron-exon | CEP68 | 2 | + | FGFRL1 | 4 | + |
| exon-exon | HSPA8 | 11 | - | LOC112268089 | 12 | - |
| exon-intron | POM121C | 7 | + | LOC105375503 | 7 | - |
| exon-exon | TIPARP | 3 | - | GAPDH | 12 | + |
| exon-exon | SDC4 | 20 | - | SDC4 | 20 | + |
| exon-exon | HIGD1A | 3 | + | C6orf62 | 6 | + |
| intron-exon | ATP1A1-AS1 | 1 | - | ATP1A1 | 1 | + |
| intron-exon | KCTD2 | 17 | + | MFAP2 | 1 | + |
| exon-exon | HSPA8P5 | 12 | - | HSPA8 | 11 | + |
| intron-exon | LOC102723582 | 3 | + | KPNA1 | 3 | - |
| exon-exon | ATP1A1 | 1 | - | ATP1A1 | 1 | + |
| exon-intron | MECOM | 3 | + | RAB7A | 3 | - |
| intron-exon | FAM20A | 17 | - | NUP50P2 | 6 | + |
| exon-intron | PHYKPL | 5 | - | TMEM144 | 4 | + |
| intron-exon | PDK1 | 2 | - | MLKL | 16 | - |
| intron-exon | PARP8 | 5 | + | MAPK8IP3 | 16 | + |
| exon-intron | CCDC50 | 3 | + | GIGYF2 | 2 | - |
| exon-intron | METTL8 | 2 | + | RALGAPA2 | 20 | - |
| intron-exon | GPRC5D-AS1 | 12 | - | GPRC5A | 12 | - |
| exon-exon | RNA45SN3 | 21 | - | LOC105378179 | 14 | - |
| intron-exon | SLC66A2 | 18 | - | RN7SL4P | 3 | + |
| intron-exon | NFIA | 1 | - | PKD1P5-LOC105376752 | 16 | - |
| exon-intron | SPP1 | 4 | + | ANXA2 | 15 | - |
| exon-exon | GAPDH | 12 | + | EIF1 | 17 | + |
| exon-exon | HADH | 4 | + | NCL | 2 | - |
| intron-exon | SMPD4BP | 2 | + | CNKSR1 | 1 | + |
| intron-exon | PHF21A | 11 | - | GOLIM4 | 3 | - |
| exon-exon | TALAM1 | 11 | - | ZNF626 | 19 | + |
| exon-exon | RNA45SN3 | 21 | - | ENO1 | 1 | - |
| exon-exon | FTL | 19 | - | FTL | 19 | + |
| intron-exon | LOC112268174 | 16 | + | TUBA4A | 2 | + |
| exon-exon | PNP | 14 | - | RAB7A | 3 | + |
| exon-exon | TRMT10B | 9 | + | CALCOCO2 | 17 | - |
| exon-exon | EEF1A1P6 | 7 | - | NSUN2 | 5 | - |
| intron-exon | ARL15 | 5 | + | GPI | 19 | + |
| intron-exon | MLH3 | 14 | + | ACSM3 | 16 | + |
| exon-exon | ENO2 | 12 | - | TNRC18 | 7 | + |
| exon-exon | ITGAV | 2 | - | HSP90AB1 | 6 | - |
| exon-exon | ND6 | MT | - | HSP90B1 | 12 | + |
| intron-exon | TANGO6 | 16 | - | HMGCR | 5 | - |
| exon-intron | ZNF514 | 2 | - | SCMH1 | 1 | - |
| exon-exon | HSP90B1 | 12 | - | HSP90B1 | 12 | + |
| exon-exon | ALDH1A1 | 9 | + | ALDH1A1 | 9 | - |
| intron-exon | APTX | 9 | + | ASS1P12 | 9 | + |
| exon-intron | LARP4 | 12 | - | LARP4 | 12 | + |
| exon-intron | GCC2 | 2 | - | UBR3 | 2 | + |
| intron-exon | WDPCP | 2 | - | RPS3A | 4 | - |
| intron-exon | PSMC6 | 14 | - | YWHAZ | 8 | - |
| exon-intron | KRT18 | 12 | + | FAM13C | 10 | - |
| exon-intron | DVL3 | 3 | + | ODF2 | 9 | - |
| exon-intron | LOC102725180 | 19 | + | PHYKPL | 5 | - |
| exon-intron | LARS2 | 3 | - | PIAS2 | 18 | - |
| exon-intron | HAUS8 | 19 | + | FAF1 | 1 | + |
| intron-exon | RNA28SP | 21 | - | RPL8 | 8 | - |
| exon-exon | TALAM1 | 11 | - | CCT6A | 7 | + |
| exon-exon | HSP90AA1 | 14 | - | CCDC91 | 12 | + |
| intron-exon | TRIM26 | 6 | + | HSP90AB1 | 6 | + |
| exon-exon | DVL3 | 3 | - | DVL3 | 3 | + |
| exon-exon | SLC3A2 | 11 | + | INVS | 9 | + |
| exon-exon | EEF1A1 | 6 | - | MCM3AP | 21 | - |
| exon-exon | COX1 | MT | + | ARCN1 | 11 | + |
| intron-exon | ADCK1 | 14 | - | POP7 | 7 | - |
| exon-exon | RNA45SN3 | 21 | - | RUVBL2 | 19 | - |
| intron-exon | LOC100505782 | 17 | + | CANX | 5 | + |
| exon-exon | TUBB4B | 9 | + | PGAP2 | 11 | - |
| intron-exon | CALN1 | 7 | + | PWP1 | 12 | - |
| exon-exon | PCDHB4 | 5 | - | PCDHB4 | 5 | + |
| exon-exon | PABPC1P4 | 12 | - | LOC107987206 | 14 | + |
| exon-intron | LETM1 | 4 | + | ERC1 | 12 | + |
| exon-exon | URI1 | 19 | - | TPM4 | 19 | - |
| exon-exon | GHITM | 10 | + | MUC5B | 11 | - |
| exon-exon | S100A10 | 1 | + | RNA45SN2 | 21 | - |
| exon-intron | RNF114 | 20 | - | TPTE2P5 | 13 | - |
| exon-exon | URI1 | 19 | - | TPM4 | 19 | - |
| exon-intron | PKM | 15 | + | EXOC3 | 5 | - |
| exon-exon | USP15 | 12 | + | UBR4 | 1 | - |
| exon-exon | VCP | 9 | + | PIGR | 1 | - |
| exon-intron | EIF4G3 | 1 | + | GGA1 | 22 | + |
| exon-exon | DBT | 1 | + | DBT | 1 | - |
| exon-exon | LOC112268123 | 14 | - | LOC105370447 | 14 | - |
| exon-exon | CKB | 14 | - | CKB | 14 | + |
| exon-intron | WASH9P | 1 | + | SLC9A8 | 20 | - |
| intron-exon | LOC108228207 | 8 | + | FBXO41 | 2 | + |
| intron-exon | DOCK1 | 10 | + | CST1 | 20 | + |
| exon-exon | HSPA9 | 5 | - | HSPA9 | 5 | + |
| exon-exon | ACTB | 7 | - | FMN1 | 15 | - |
| intron-exon | IGSF5 | 21 | - | FTL | 19 | + |
| exon-exon | PITPNA | 17 | - | ACTB | 7 | - |
| intron-exon | OSBPL10 | 3 | - | LOC389602 | 7 | + |
| intron-exon | CAMKK2 | 12 | - | PIP5K1A | 1 | + |
| exon-exon | ND4 | MT | - | ND4 | MT | + |
| intron-exon | SAMD4A | 14 | + | PTCD2 | 5 | + |
| intron-exon | SH3KBP1 | X | + | ZKSCAN1 | 7 | + |
| exon-exon | EMP2 | 16 | + | EMP2 | 16 | - |
| exon-exon | COX1 | MT | - | COX1 | MT | + |
| exon-intron | CRK | 17 | - | RNR2 | MT | - |
| exon-exon | MUC4 | 3 | - | MALAT1 | 11 | + |
| exon-exon | MUC2 | 11 | + | RNF214 | 11 | - |
| exon-exon | SLC12A2 | 5 | - | ATF5 | 19 | - |
| exon-exon | TUBA1B | 12 | - | CYTB | MT | - |
| exon-exon | CCND1 | 11 | - | NFAT5 | 16 | + |
| exon-intron | CAPRIN1 | 11 | - | LOC107986650 | 6 | - |
| intron-exon | P4HTM | 3 | + | ARHGAP35 | 19 | - |
| exon-exon | KRI1 | 19 | + | PABPC1 | 8 | - |
| exon-intron | RPS27A | 2 | - | RNR2 | MT | + |
| exon-intron | MISP | 19 | - | RNR2 | MT | + |
| exon-intron | RN7SK | 6 | - | RNR2 | MT | + |
| exon-exon | PABPC1 | 8 | + | COX1 | MT | + |
| exon-exon | COX1 | MT | - | SLC7A5 | 16 | - |
| exon-intron | SLAIN2 | 4 | - | MTCO1P12 | 1 | + |
| exon-exon | CTTN | 11 | - | EEF1A1P5 | 9 | + |
| exon-exon | RNA45SN3 | 21 | - | COX1 | MT | + |
| exon-intron | BRD8 | 5 | + | RBFOX1 | 16 | - |
| exon-exon | NUDT16 | 3 | + | ASXL1 | 20 | - |
| exon-exon | RNA45SN1 | 21 | - | TRIM74 | 7 | - |
| exon-exon | KDM5C | X | + | C1QBP | 17 | - |
| exon-intron | EIF2S3 | X | - | AHRR | 5 | - |
| exon-intron | EPPK1 | 8 | + | FAM217B | 20 | + |
| exon-intron | FAM160A2 | 11 | - | PIP5K1A | 1 | + |
| exon-exon | BAP1 | 3 | - | RNA45SN1 | 21 | + |
| exon-exon | COX2 | MT | - | RUVBL2 | 19 | + |
| exon-exon | PKM | 15 | - | FUS | 16 | + |
| exon-intron | MORF4L2 | X | + | ATXN7L1 | 7 | - |
| intron-exon | UBXN7 | 3 | - | KDM1A | 1 | - |
| exon-exon | RPS13 | 11 | - | HDGF | 1 | - |
| intron-exon | KIAA1671 | 22 | - | PKM | 15 | - |
| exon-intron | LOC105369373 | 11 | - | GLB1 | 3 | - |
| exon-exon | HEXA | 15 | + | HSPA8 | 11 | - |
| intron-exon | ARID1B | 6 | - | IDH3B | 20 | - |
| exon-exon | SPTBN1 | 2 | + | RPS4X | X | - |
| exon-exon | RPL24 | 3 | + | DENND11 | 7 | - |
| exon-intron | EEA1 | 12 | - | WDR61 | 15 | - |
| exon-exon | SREK1 | 5 | - | ANKRD12 | 18 | - |
| exon-intron | ATP6V0A1 | 17 | + | OSBPL3 | 7 | + |
| exon-exon | AARS1 | 16 | + | HSPA8P1 | X | - |
| exon-intron | PIP5K1B | 9 | + | PTDSS2 | 11 | + |
| intron-exon | KANSL1L | 2 | - | RPE | 2 | - |
| intron-exon | RUSF1 | 16 | + | MYO1D | 17 | - |
| intron-exon | PC | 11 | + | MYEOV | 11 | - |
| exon-exon | CLSTN1 | 1 | - | CLMN | 14 | + |
| exon-exon | MTPN | 7 | + | CA12 | 15 | - |
| exon-intron | LONP2 | 16 | + | CYP4F12 | 19 | + |
| exon-exon | GNB2 | 7 | - | GNB2 | 7 | + |
| intron-exon | LOC105376644 | 11 | + | LOC107987206 | 14 | + |
| exon-exon | CEACAM7 | 19 | + | STIP1 | 11 | + |
| exon-exon | CDH17 | 8 | + | PRR26 | 10 | + |
| exon-exon | BHLHE41 | 12 | - | NOMO1 | 16 | + |
| exon-intron | ST6GALNAC1 | 17 | + | NDE1 | 16 | + |
| exon-exon | GFRA1 | 10 | + | PLA2G2A | 1 | - |
| exon-exon | TCF7L2 | 10 | - | SERPINB6 | 6 | - |
| exon-exon | USP30 | 12 | + | USP30 | 12 | - |
| exon-exon | FLNA | X | - | FLNA | X | + |
| exon-exon | CALM3 | 19 | - | RO60 | 1 | + |
| exon-exon | ATP2A2 | 12 | - | AAAS | 12 | + |
| intron-exon | OR2A1-AS1 | 7 | + | FGD6 | 12 | - |
| intron-exon | EVL | 14 | + | ZNF875 | 19 | - |
| exon-exon | IGLL5 | 22 | - | IGLV3-19 | 22 | - |
| exon-exon | P3H2 | 3 | - | DHRS7B | 17 | - |
| intron-exon | HM13 | 20 | + | S100A6 | 1 | - |
| exon-intron | CDK18 | 1 | - | NR2C1 | 12 | - |
| exon-exon | IGHG1 | 14 | - | IGHG1 | 14 | + |
| exon-exon | MAML1 | 5 | + | ACAA2 | 18 | - |
| exon-exon | PKM | 15 | - | VCAM1 | 1 | + |
| exon-exon | HLA-A | 6 | - | COL1A1 | 17 | + |
| exon-intron | USP34 | 2 | + | RNF213 | 17 | - |
| exon-exon | FTH1 | 11 | + | BEST1 | 11 | + |
| exon-exon | C1orf116 | 1 | - | C1orf116 | 1 | + |
| exon-exon | CLUH | 17 | + | FTH1 | 11 | - |
| intron-exon | CACNA1H | 16 | - | KCTD10 | 12 | - |
| exon-exon | RNA45SN3 | 21 | - | MAPK8IP1 | 11 | + |
| exon-intron | PKN1 | 19 | - | RAB1B | 11 | + |
| exon-intron | PPP1R9B | 17 | + | PREX1 | 20 | + |
| intron-exon | AC016590.1 | 19 | - | YBX3 | 12 | + |
| exon-exon | CFL1 | 11 | - | HMGXB3 | 5 | + |
| exon-exon | FLNA | X | + | ARID5B | 10 | + |
| exon-exon | NUP214 | 9 | - | NUP214 | 9 | + |
| intron-exon | ANKRD17 | 4 | + | LARP4 | 12 | + |
| intron-exon | ADAMTS9-AS2 | 3 | - | SFTPA1 | 10 | + |
| exon-exon | QARS1 | 3 | + | QARS1 | 3 | - |
| exon-exon | RAP2B | 3 | + | RAP2B | 3 | - |
| exon-exon | YBX1P1 | 14 | + | RPL23 | 17 | - |
| exon-exon | DNAH10 | 12 | + | DDX42 | 17 | + |
| intron-exon | LRMDA | 10 | - | TUBG2 | 17 | - |
| exon-exon | SET | 9 | - | SETP14 | 3 | - |
| exon-exon | SETP14 | 3 | + | SET | 9 | + |
| exon-exon | SET | 9 | + | SETP14 | 3 | + |
| exon-exon | SET | 9 | - | SETP14 | 3 | - |
| exon-intron | PRPF6 | 20 | - | PTRH2 | 17 | - |
| exon-exon | SH2B3 | 12 | + | TRIOBP | 22 | + |
| intron-exon | DAPK2 | 15 | - | RPL8 | 8 | - |
| exon-exon | LOC107984335 | 11 | - | KRT15 | 17 | - |
| exon-exon | LASP1 | 17 | - | DIDO1 | 20 | - |
| intron-exon | SETX | 9 | - | PATJ | 1 | + |
| exon-exon | TLN1 | 9 | - | P2RX4 | 12 | + |
| exon-intron | COL6A3 | 2 | + | STK39 | 2 | + |
| exon-intron | HADHA | 2 | - | GAREM2 | 2 | + |
| exon-exon | MMP24-AS1-EDEM2 | 20 | + | MMP24-AS1-EDEM2 | 20 | - |
| exon-exon | LTBP4 | 19 | + | LTBP4 | 19 | - |
| intron-exon | PGLYRP2 | 19 | + | ITGA5 | 12 | - |
| exon-exon | NIPSNAP1 | 22 | + | NIPSNAP1 | 22 | - |
| exon-intron | CD74 | 5 | - | STAG3L1 | 7 | - |
| exon-exon | RPS24 | 10 | - | RNA45SN3 | 21 | + |
| exon-intron | TSPAN3 | 15 | + | RIF1 | 2 | + |
| exon-intron | ARF3 | 12 | + | LOC105369706 | 12 | + |
| exon-intron | ITGB5 | 3 | + | PPP6R3 | 11 | + |
| exon-exon | CRABP2 | 1 | + | RNA45SN2 | 21 | + |
| intron-exon | PCMTD1 | 8 | - | MSN | X | + |
| exon-exon | IGHG3 | 14 | - | IGHG1 | 14 | - |
| exon-exon | IGHG1 | 14 | - | IGHG2 | 14 | - |
| exon-exon | IGHG3 | 14 | - | IGHG1 | 14 | - |
| exon-exon | DDX55 | 12 | + | ALDH3A1 | 17 | - |
| exon-exon | INTS14 | 15 | + | INTS14 | 15 | - |
| intron-exon | LOC112268138 | 14 | + | IGHG3 | 14 | + |
| exon-intron | MAN2B2 | 4 | - | TP63 | 3 | + |
| exon-intron | CSNK1G2 | 19 | + | IRS2 | 13 | + |
| exon-intron | IGHG3 | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | NPIPB3 | 16 | - | TUBB | 6 | - |
| exon-intron | THRAP3 | 1 | + | KIAA0319L | 1 | - |
| intron-exon | LOC112268138 | 14 | + | EPHX1 | 1 | + |
| exon-intron | CGNL1 | 15 | + | TBC1D22A | 22 | + |
| intron-exon | ACCS | 11 | + | CES1 | 16 | - |
| intron-exon | LOC102724808 | 3 | - | AKAP13 | 15 | + |
| exon-exon | CALR | 19 | - | MORC2-AS1 | 22 | - |
| exon-intron | TAF6L | 11 | + | PRKCI | 3 | + |
| exon-exon | PRPF4B | 6 | + | SEC63 | 6 | - |
| exon-intron | PATZ1 | 22 | + | LINC-PINT | 7 | - |
| exon-intron | RAB11FIP1 | 8 | + | SUB1 | 5 | + |
| exon-exon | HSPA5 | 9 | + | HSPA5 | 9 | - |
| intron-exon | USP6NL | 10 | - | MCOLN1 | 19 | - |
| intron-exon | ZDHHC14 | 6 | + | EPM2AIP1 | 3 | + |
| exon-intron | TNFAIP8 | 5 | - | LOC105371574 | 17 | + |
| exon-intron | RIOK1 | 6 | - | IQCJ-SCHIP1 | 3 | - |
| exon-exon | FTH1P7 | 13 | + | RNA45SN1 | 21 | - |
| exon-exon | MINK1 | 17 | - | CALM1 | 14 | - |
| exon-exon | FCN1 | 9 | + | FCN1 | 9 | - |
| exon-exon | LTA4H | 12 | - | RPLP2 | 11 | - |
| intron-exon | SLC11A1 | 2 | - | PLEC | 8 | + |
| exon-intron | NEAT1 | 11 | - | HERC2P9 | 15 | - |
| intron-exon | BPI | 20 | - | EXOSC3 | 9 | + |
| exon-intron | PHLDB1 | 11 | - | SNAP47 | 1 | + |
| exon-exon | ORC2 | 2 | + | ORC2 | 2 | - |
| exon-exon | LOC112268170 | 16 | - | MAZ | 16 | - |
| exon-exon | MKI67 | 10 | + | NAMPT | 7 | - |
| exon-intron | GALNT2 | 1 | - | MEMO1 | 2 | - |
| exon-exon | MYH9 | 22 | + | C20orf96 | 20 | + |
| exon-exon | SMG5 | 1 | - | DIDO1 | 20 | - |
| exon-exon | YBX1 | 1 | + | YBX3 | 12 | + |
| exon-exon | UBC | 12 | + | UBC | 12 | - |
| exon-exon | VPS13C | 15 | - | VPS13C | 15 | + |
| exon-intron | MYH9 | 22 | + | C11orf42 | 11 | + |
| exon-intron | KANSL1 | 17 | + | AGTRAP | 1 | - |
| exon-exon | AAK1 | 2 | + | USP19 | 3 | - |
| intron-exon | BPI | 20 | - | SLC35E2A | 1 | - |
| exon-exon | CTSA | 20 | - | NUP210 | 3 | + |
| intron-exon | PRELID1 | 5 | + | MXD3 | 5 | - |
| exon-exon | ARAP3 | 5 | - | BSDC1 | 1 | - |
| exon-exon | ZNFX1 | 20 | - | MPO | 17 | - |
| exon-exon | PPP1R12C | 19 | - | SNX32 | 11 | + |
| intron-exon | DGCR2 | 22 | + | GRN | 17 | + |
| exon-intron | TSPOAP1 | 17 | + | LOC107986356 | 5 | + |
| exon-intron | LMF2 | 22 | + | ARPC4-TTLL3 | 3 | - |
| exon-exon | MSL1 | 17 | + | RBM28 | 7 | + |
| exon-exon | CFLAR | 2 | + | ECE1 | 1 | + |
| exon-intron | CAMTA2 | 17 | + | DAP | 5 | + |
| exon-exon | S100A8 | 1 | - | ANXA11 | 10 | - |
| exon-intron | RNASE2 | 14 | + | SLC12A5-AS1 | 20 | - |
| intron-exon | LOC112268446 | 3 | - | LSM14B | 20 | + |
| intron-exon | PTPN1 | 20 | + | JAML | 11 | - |
| exon-intron | SHC3 | 9 | + | SNED1 | 2 | + |
| exon-intron | SZT2 | 1 | + | RRAGC | 1 | - |
| exon-exon | KMT2E | 7 | + | MEG3 | 14 | - |
| intron-exon | CACHD1 | 1 | - | PDHA1 | X | + |
| exon-intron | ROBO2 | 3 | + | PSMD14 | 2 | - |
| intron-exon | AC105749.1 | 3 | + | COX15 | 10 | + |
| exon-exon | GOT2 | 16 | - | HTT | 4 | + |
| exon-exon | ND4 | MT | - | CACNA1B | 9 | - |
| exon-exon | SLC4A10 | 2 | + | ARL13B | 3 | + |
| exon-intron | ZFP90 | 16 | + | UBE2R2 | 9 | + |
| exon-exon | COX1 | MT | - | RAB6B | 3 | - |
| intron-exon | ITPK1 | 14 | - | ADH5 | 4 | - |
| exon-exon | KMT2C | 7 | + | DYNC1H1 | 14 | - |
| intron-exon | CCND2 | 12 | - | KNDC1 | 10 | + |
| intron-exon | TNPO1 | 5 | - | ZNF106 | 15 | + |
| exon-exon | INS-IGF2 | 11 | + | INS-IGF2 | 11 | - |
| exon-exon | UNC80 | 2 | + | ITPKB | 1 | + |
| exon-intron | ATP2B1 | 12 | - | LOC102724843 | 21 | + |
| exon-exon | GGA2 | 16 | - | NUCKS1 | 1 | + |
| intron-exon | NEMF | 14 | - | GNB5 | 15 | + |
| exon-exon | HSPA8 | 11 | + | SLC7A6 | 16 | + |
| exon-exon | DCAF13 | 8 | + | DCAF13 | 8 | - |
| exon-exon | GAPDH | 12 | - | C1orf61 | 1 | - |
| exon-exon | ARHGEF4 | 2 | + | ARHGEF4 | 2 | - |
| exon-exon | MYCBP2 | 13 | + | GFAP | 17 | + |
| exon-exon | NDUFS2 | 1 | + | ATP1A3 | 19 | - |
| exon-exon | COX1 | MT | - | XPO6 | 16 | + |
| exon-intron | POLR3GL | 1 | - | NHSL1 | 6 | - |
| intron-exon | WDR88 | 19 | - | ZNF592 | 15 | + |
| exon-exon | CADM3-AS1 | 1 | - | CADM3 | 1 | - |
| exon-exon | SPOUT1 | 9 | + | SPOUT1 | 9 | - |
| exon-exon | NLGN3 | X | + | NLGN3 | X | - |
| intron-exon | ELOVL7 | 5 | + | TSPYL1 | 6 | - |
| intron-exon | PDCL2 | 4 | + | ATP1B2 | 17 | - |
| intron-exon | SERGEF | 11 | + | TERF2IP | 16 | - |
| exon-intron | SNAP25 | 20 | - | IGSF9B | 11 | + |
| exon-exon | PLEKHM3 | 2 | - | KIF5A | 12 | + |
| exon-intron | C1orf21 | 1 | + | ARMCX4 | X | - |
| intron-exon | LOC105375321 | 7 | + | MAP1B | 5 | + |
| exon-intron | SH3GLB1 | 1 | + | ITFG1 | 16 | + |
| exon-intron | PKP4 | 2 | + | IL1RAPL1 | X | - |
| exon-exon | TPR | 1 | + | VPS26A | 10 | + |
| intron-exon | SEC23IP | 10 | - | INPP5F | 10 | - |
| exon-exon | MAST3 | 19 | + | PBX2 | 6 | + |
| exon-exon | MYRF | 11 | + | PRPF3 | 1 | - |
| exon-exon | ERAL1 | 17 | + | TMEM131 | 2 | - |
| exon-exon | TRIM9 | 14 | + | DNAJA2 | 16 | + |
| exon-intron | PARP3 | 3 | + | PPM1K-DT | 4 | - |
| exon-intron | CDKN1C | 11 | - | ARHGAP32 | 11 | + |
| intron-exon | LRRTM4 | 2 | - | CELF2 | 10 | + |
| intron-exon | RALGAPA2 | 20 | + | ZNF571-AS1 | 19 | + |
| intron-exon | LOC105373204 | X | + | DYNC1H1 | 14 | - |
| exon-exon | PNPO | 17 | - | PNPO | 17 | + |
| exon-exon | LOC101928377 | 14 | + | SMAD2 | 18 | + |
| exon-intron | OPTN | 10 | - | AP001318.2 | 11 | - |
| exon-exon | RN7SL752P | 3 | + | LOC105378179 | 14 | - |
| intron-exon | HDAC8 | X | + | RPS4X | X | - |
| exon-exon | ND4 | MT | - | COX1 | MT | + |
| exon-intron | THRB | 3 | + | HDGFL3 | 15 | + |
| exon-intron | HSP90AA1 | 14 | - | LOC728755 | 14 | + |
| intron-exon | LOC105379452 | 9 | - | ILF3 | 19 | - |
| exon-exon | CCNL2 | 1 | + | HSPA5 | 9 | - |
| exon-exon | SPSB2 | 12 | - | PRPF40B | 12 | + |
| exon-exon | MED28 | 4 | - | CCND1 | 11 | + |
| exon-exon | ACSS2 | 20 | + | ACSS2 | 20 | - |
| exon-intron | RPL4 | 15 | + | RHOJ | 14 | + |
| intron-exon | KRTCAP2 | 1 | + | ATP1A1 | 1 | + |
| exon-exon | NUCKS1 | 1 | - | ASRGL1 | 11 | + |
| exon-intron | CEMIP | 15 | + | DLX6-AS1 | 7 | + |
| exon-intron | DISP1 | 1 | + | RP11-838N2.5 | 18 | - |
| exon-exon | C16orf70 | 16 | + | EEF1A1 | 6 | - |
| intron-exon | C20orf194 | 20 | - | RELL1 | 4 | + |
| intron-exon | ZDHHC11 | 5 | + | AHNAK | 11 | - |
| exon-exon | SLC38A2 | 12 | + | POGZ | 1 | + |
| intron-exon | LOC100420852 | 17 | - | DDX55 | 12 | - |
| exon-exon | COL1A1 | 17 | + | TNRC6C | 17 | + |
| exon-exon | RPL13AP5 | 10 | + | RPL13A | 19 | - |
| exon-exon | KRCC1 | 2 | + | RNF145 | 5 | - |
| exon-intron | COG1 | 17 | - | RP11-143K11.5 | 17 | - |
| exon-exon | GAPDH | 12 | + | GFAP | 17 | + |
| exon-intron | SEPTIN9 | 17 | + | LOC105369657 | 12 | - |
| intron-exon | BLCAP | 20 | + | NDUFA10 | 2 | + |
| exon-exon | RAB11FIP1 | 8 | + | WLS | 1 | - |
| exon-exon | CCT6A | 7 | - | MDH2 | 7 | + |
| exon-exon | TIMP3 | 22 | + | ZBTB24 | 6 | + |
| exon-exon | BBS1 | 11 | + | GFAP | 17 | + |
| exon-intron | COG4 | 16 | + | JADE1 | 4 | - |
| intron-exon | DENND4B | 1 | + | BLMH | 17 | - |
| exon-intron | C1S | 12 | - | APMAP | 20 | + |
| exon-exon | CLU | 8 | - | ZFAND2B | 2 | - |
| exon-intron | SYNPO2 | 4 | + | HIPK2 | 7 | - |
| intron-exon | LOC105375762 | 8 | + | DNAJC14 | 12 | - |
| exon-exon | NDRG2 | 14 | + | RPL10 | X | + |
| exon-intron | ACP6 | 1 | - | PRIM2 | 6 | - |
| exon-exon | DBN1 | 5 | + | CLU | 8 | - |
| intron-exon | ULK4 | 3 | + | CCNB1 | 5 | - |
| exon-exon | PALM3 | 19 | - | SLC17A7 | 19 | - |
| intron-exon | LPP | 3 | - | SNX6 | 14 | - |
| exon-exon | ACRBP | 12 | + | MLXIP | 12 | - |
| exon-exon | OAF | 11 | - | CDK19 | 6 | - |
| exon-exon | WDR45 | X | + | TPP1 | 11 | + |
| exon-exon | ITGA10 | 1 | - | MSL1 | 17 | - |
| exon-exon | LENG8 | 19 | - | PNPO | 17 | - |
| intron-exon | MDC1-AS1 | 6 | + | HLA-DRA | 6 | + |
| intron-exon | HIBADH | 7 | - | MARCHF6 | 5 | + |
| intron-exon | WDR1 | 4 | + | STX4 | 16 | - |
| exon-intron | GPBP1 | 5 | - | JMJD1C | 10 | - |
| exon-intron | APC | 5 | + | SYTL4 | X | - |
| exon-exon | IRGQ | 19 | + | IRGQ | 19 | - |
| intron-exon | ANKDD1A | 15 | - | NR2E3 | 15 | - |
| exon-intron | IFIT2 | 10 | + | CLIP1 | 12 | - |
| intron-exon | COLQ | 3 | - | NICN1 | 3 | + |
| exon-intron | IL17RA | 22 | - | TRPM1 | 15 | - |
| intron-exon | IQCJ-SCHIP1 | 3 | - | FEZ1 | 11 | + |
| exon-exon | FTL | 19 | - | FTL | 19 | + |
| intron-exon | GLUL | 1 | + | GLUL | 1 | - |
| exon-intron | ZNF337-AS1 | 20 | + | C11orf49 | 11 | + |
| exon-intron | BAZ2B | 2 | - | PRKAA1 | 5 | + |
| exon-exon | EEF2 | 19 | - | EEF2 | 19 | + |
| intron-exon | SNTA1 | 20 | + | PPP6R3 | 11 | - |
| exon-exon | CCDC18-AS1 | 1 | - | ABCA8 | 17 | - |
| intron-exon | ADAMTS12 | 5 | + | RPL4P4 | 3 | - |
| exon-intron | POLR2A | 17 | - | LINC01599 | 14 | - |
| exon-exon | ATP6AP2 | X | - | APC | 5 | + |
| exon-intron | UNG | 12 | + | H2AC6 | 6 | - |
| intron-exon | MTCO1P12 | 1 | + | ATP5F1A | 18 | - |
| exon-intron | SRP54 | 14 | + | MAP2K5 | 15 | - |
| exon-exon | OSBPL9 | 1 | + | NPEPPS | 17 | + |
| exon-exon | PGK1 | X | + | TP53BP1 | 15 | - |
| intron-exon | PRKACB | 1 | + | NPEPPSP1 | 17 | - |
| intron-exon | MFHAS1 | 8 | + | DDX18 | 2 | + |
| exon-exon | HSP90AB1 | 6 | + | HSP90AB2P | 4 | - |
| exon-exon | RPL3 | 22 | + | RPL3P7 | 6 | - |
| exon-exon | EEF2 | 19 | + | EEF2 | 19 | - |
| exon-exon | HSPA8 | 11 | + | TRPC6 | 11 | - |
| exon-exon | EEF1G | 11 | + | COX1 | MT | + |
| exon-exon | RPL26 | 17 | + | ZNF721 | 4 | - |
| exon-exon | ABCA5 | 17 | + | HSP90AA1 | 14 | + |
| exon-exon | KRT6C | 12 | + | KRT6C | 12 | - |
| intron-exon | CEP70 | 3 | + | TALAM1 | 11 | - |
| exon-intron | VIM | 10 | - | INO80E | 16 | + |
| intron-exon | FBXO30-DT | 6 | + | SLC25A46 | 5 | - |
| exon-exon | NDUFS3 | 11 | + | PDE4B | 1 | - |
| exon-intron | ETFA | 15 | - | GAS7 | 17 | - |
| exon-exon | EEF1A1 | 6 | + | EEF1A1P6 | 7 | + |
| exon-exon | RPS4Y1 | Y | + | MKNK2 | 19 | + |
| exon-intron | MUC21 | 6 | + | ANO1 | 11 | + |
| exon-exon | HIP1 | 7 | - | HIP1 | 7 | + |
| exon-exon | FUT3 | 19 | + | RNA45SN2 | 21 | + |
| intron-exon | G6PD | X | - | G6PD | X | + |
| exon-exon | HSP90AB1 | 6 | + | EEF1G | 11 | - |
| exon-intron | SERINC2 | 1 | + | LCN2 | 9 | - |
| exon-exon | TMEM50A | 1 | + | TMEM50A | 1 | - |
| exon-exon | ATP5F1B | 12 | + | CCNI | 4 | - |
| exon-exon | LAMP1 | 13 | + | COX3 | MT | - |
| exon-exon | KRT13 | 17 | + | KRT14 | 17 | + |
| exon-exon | KRT13 | 17 | + | KRT14 | 17 | + |
| exon-exon | IRF6 | 1 | + | KRT14 | 17 | + |
| exon-intron | EXOC3 | 5 | - | NPIPB5 | 16 | + |
| exon-exon | AGFG1 | 2 | - | RNA45SN2 | 21 | - |
| exon-exon | KRT5 | 12 | + | KRT5 | 12 | - |
| exon-exon | BEST1 | 11 | + | FTH1 | 11 | - |
| exon-intron | PPP3CA | 4 | - | IL12A-AS1 | 3 | - |
| exon-exon | LRPAP1 | 4 | + | KRT17 | 17 | + |
| exon-exon | PTGES3 | 12 | - | PTGES3P4 | 10 | - |
| exon-intron | EIF4G1 | 3 | - | ELMO1 | 7 | + |
| exon-exon | HSPA8 | 11 | + | FTH1 | 11 | - |
| intron-exon | COX2 | MT | - | PRDX4 | X | - |
| exon-exon | C5AR1 | 19 | + | SSR1 | 6 | - |
| intron-exon | PPP6R2 | 22 | - | INTS3 | 1 | - |
| exon-exon | RSL1D1 | 16 | + | RSL1D1 | 16 | - |
| exon-intron | LOC101928923 | 6 | + | LOC105378071 | 6 | + |
| exon-exon | LINC00540 | 13 | + | LOC105370108 | 13 | + |
| intron-exon | CPM | 12 | - | CCT3 | 1 | - |
| exon-exon | CTSD | 11 | + | CTSD | 11 | - |
| exon-exon | TALAM1 | 11 | - | MALAT1 | 11 | - |
| intron-exon | BPHL | 6 | - | PTMA | 2 | + |
| exon-exon | GBF1 | 10 | - | GBF1 | 10 | + |
| exon-exon | EPHB2 | 1 | + | EPHB2 | 1 | - |
| exon-exon | RNA45SN2 | 21 | - | FN1 | 2 | + |
| intron-exon | CBX1 | 17 | + | CSDE1 | 1 | - |
| exon-intron | SLC4A7 | 3 | + | ARID4B | 1 | - |
| exon-exon | SLC12A7 | 5 | - | NEAT1 | 11 | + |
| intron-exon | WASH3P | 15 | + | PKD1 | 16 | - |
| exon-exon | PJA2 | 5 | + | MALAT1 | 11 | + |
| intron-exon | TTN-AS1 | 2 | + | BBX | 3 | - |
| exon-exon | RHOA | 3 | + | AHNAK2 | 14 | + |
| exon-intron | MMUT | 6 | - | TPTE2P1 | 13 | - |
| exon-exon | BNIP3L | 8 | - | ABHD14B | 3 | - |
| exon-intron | XAB2 | 19 | - | FBXL13 | 7 | - |
| exon-exon | KIAA1217 | 10 | - | EIF4A2 | 3 | + |
| intron-exon | DNAH2 | 17 | - | MKI67 | 10 | - |
| exon-intron | IGHV3-33 | 14 | - | IGH | 14 | - |
| exon-intron | U2SURP | 3 | + | PSMG3-AS1 | 7 | - |
| exon-intron | EXOC6B | 2 | + | MYH11 | 16 | + |
| exon-exon | MAGI2-AS3 | 7 | - | TCERG1 | 5 | + |
| exon-exon | SLC12A6 | 15 | - | EMC4 | 15 | - |
| exon-exon | COX1 | MT | - | IGFN1 | 1 | + |
| intron-exon | ASMTL | Y | - | ATM | 11 | + |
| exon-exon | RNA45SN1 | 21 | - | LOC112268284 | 21 | - |
| intron-exon | ANKRD36 | 2 | - | LOC107986991 | 9 | + |
| intron-exon | LOC102723758 | 7 | + | CTTN | 11 | + |
| exon-intron | RALGPS1 | 9 | - | LOC102723568 | 11 | + |
| intron-exon | PDE12 | 3 | + | DNAH14 | 1 | + |
| intron-exon | LOC100507516 | 8 | - | WDR82 | 3 | + |
| intron-exon | SRGAP2 | 1 | - | SLC41A1 | 1 | - |
| intron-exon | HNRNPA2B1 | 7 | + | TPGS2 | 18 | + |
| exon-intron | MALAT1 | 11 | + | TBC1D10A | 22 | - |
| exon-intron | PDHX | 11 | - | CTDSPL | 3 | - |
| exon-exon | UBC | 12 | - | UBC | 12 | + |
| exon-intron | H3-3B | 17 | + | PACS2 | 14 | + |
| intron-exon | RAB7A | 3 | - | NDUFV2 | 18 | + |
| exon-exon | MRPL35 | 2 | - | MLLT6 | 17 | + |
| exon-intron | EFEMP2 | 11 | - | SNHG22 | 18 | + |
| exon-exon | XPO7 | 8 | + | XPO7 | 8 | - |
| exon-intron | MBD2 | 18 | - | MACF1 | 1 | - |
| exon-exon | PTRH1 | 9 | - | STXBP1 | 9 | - |
| exon-exon | TSTD2 | 9 | - | DAPK2 | 15 | - |
| exon-exon | USF1 | 1 | + | USF1 | 1 | - |
| exon-exon | RALGDS | 9 | + | LINC01061 | 4 | + |
| intron-exon | FXYD6-FXYD2 | 11 | - | PTDSS2 | 11 | - |
| exon-exon | VAMP2 | 17 | - | TUBB | 6 | + |
| exon-exon | SAMD10 | 20 | - | ZNF512B | 20 | - |
| exon-exon | UBA52 | 19 | - | NUDC | 1 | + |
| exon-exon | RPSAP58 | 19 | - | RPSAP19 | 1 | - |
| exon-exon | EEF1A1P5 | 9 | + | EEF1A1 | 6 | + |
| exon-exon | RPSA | 3 | - | RPSAP19 | 1 | - |
| exon-exon | INS-IGF2 | 11 | + | INS-IGF2 | 11 | - |
| intron-exon | MIB2 | 1 | - | PSMD3 | 17 | + |
| intron-exon | LOC105372442 | 19 | + | KLK6 | 19 | - |
| exon-intron | PFN1 | 17 | + | TMEM214 | 2 | - |
| exon-exon | SLC3A2 | 11 | - | SLC3A2 | 11 | + |
| exon-intron | GSTM3 | 1 | + | PGBD5 | 1 | + |
| exon-exon | ARHGEF34P | 7 | - | TWF2 | 3 | - |
| intron-exon | USP34 | 2 | + | DYSF | 2 | - |
| exon-exon | SCARB2 | 4 | - | JAK1 | 1 | - |
| intron-exon | NUMA1 | 11 | - | ACTB | 7 | - |
| exon-exon | TUBB4B | 9 | + | TUBB4B | 9 | - |
| exon-exon | MXD1 | 2 | - | RILPL2 | 12 | - |
| exon-intron | ACTG2 | 2 | - | B4GALNT2 | 17 | - |
| exon-exon | SFN | 1 | - | SFN | 1 | + |
| exon-exon | ATP5F1B | 12 | + | UBQLN1 | 9 | + |
| intron-exon | RGPD2 | 2 | - | IARS1 | 9 | - |
| exon-exon | HSPA8 | 11 | - | STX3 | 11 | + |
| exon-exon | CUL4A | 13 | + | HSPD1 | 2 | - |
| exon-exon | CTPS1 | 1 | + | CHD4 | 12 | + |
| exon-exon | TM4SF1 | 3 | + | ATP6 | MT | + |
| exon-exon | POLE | 12 | + | HSPA8 | 11 | - |
| exon-exon | FTL | 19 | + | FTL | 19 | - |
| exon-exon | RPSA | 3 | - | KRT8 | 12 | - |
| exon-exon | TRRAP | 7 | + | FBLIM1 | 1 | + |
| exon-exon | SGPL1 | 10 | + | SGPL1 | 10 | - |
| intron-exon | BPTF | 17 | - | WTAP | 6 | + |
| intron-exon | AQP4-AS1 | 18 | + | HLA-DRB1 | 6 | + |
| exon-intron | EEF1A1P5 | 9 | + | PRIMA1 | 14 | - |
| exon-intron | EEF1A1P5 | 9 | - | C1orf21 | 1 | - |
| intron-exon | PPARG | 3 | - | AAK1 | 2 | - |
| exon-intron | MDC1 | 6 | - | OPTN | 10 | - |
| exon-exon | EPS8 | 12 | + | EPS8 | 12 | - |
| intron-exon | TMEM135 | 11 | + | SBNO1 | 12 | + |
| exon-exon | THTPA | 14 | - | AP1G2 | 14 | - |
| intron-exon | IGH | 14 | - | USP47 | 11 | - |
| intron-exon | BCAR3 | 1 | + | CBLL1 | 7 | + |
| exon-intron | HSP90AB1 | 6 | - | TAF4 | 20 | - |
| exon-exon | EEF1A1P5 | 9 | + | PIK3C2B | 1 | - |
| intron-exon | AK6 | 5 | + | PAPPA | 9 | - |
| exon-intron | PAPPA | 9 | + | RPGR | X | + |
| exon-intron | CERS5 | 12 | + | TIAM1 | 21 | - |
| intron-exon | VIM-AS1 | 10 | - | DOCK11 | X | + |
| intron-exon | AC010203.1 | 12 | - | GOLGA2P5 | 12 | - |
| intron-exon | NFAT5 | 16 | + | PSG2 | 19 | + |
| exon-intron | PSG1 | 19 | - | DAPK1 | 9 | + |
| intron-exon | LOC728755 | 14 | + | ATF4 | 22 | - |
| exon-exon | STOX2 | 4 | - | STOX2 | 4 | + |
| exon-exon | CALD1 | 7 | - | CALD1 | 7 | + |
| intron-exon | ITGA9-AS1 | 3 | - | TMEM140 | 7 | + |
| exon-exon | COL6A1 | 21 | + | SFPQ | 1 | - |
| exon-exon | RPL3P2 | 6 | - | GFPT2 | 5 | - |
| exon-intron | BIRC6 | 2 | - | COLEC12 | 18 | - |
| exon-intron | MRFAP1 | 4 | - | PLCG1-AS1 | 20 | - |
| exon-exon | NEAT1 | 11 | - | PHLDB1 | 11 | + |
| exon-exon | PEA15 | 1 | - | INS-IGF2 | 11 | - |
| exon-exon | PSMD2 | 3 | - | ADAM12 | 10 | + |
| exon-exon | FN1 | 2 | + | TMED2 | 12 | + |
| exon-intron | GLRX | 5 | + | TTC28-AS1 | 22 | + |
| intron-exon | IQCJ-SCHIP1 | 3 | - | COL4A2 | 13 | + |
| intron-exon | ZNF91 | 19 | - | TAB2 | 6 | - |
| intron-exon | ANKMY1 | 2 | + | H19 | 11 | - |
| exon-exon | FERMT2 | 14 | - | SMG8 | 17 | + |
| exon-intron | OSGEP | 14 | - | SGMS1 | 10 | - |
| exon-exon | SPTLC2 | 14 | + | EEF1A1P6 | 7 | - |
| exon-exon | LAMC3 | 9 | - | LAMC3 | 9 | + |
| exon-intron | CDH1 | 16 | - | ZFYVE19 | 15 | + |
| intron-exon | ENTPD1-AS1 | 10 | - | KIAA0232 | 4 | - |
| intron-exon | CHD1L | 1 | + | NEAT1 | 11 | - |
| exon-exon | DELE1 | 5 | + | MAGI1 | 3 | - |
| exon-exon | CYP19A1 | 15 | - | CPM | 12 | - |
| exon-exon | RBM6 | 3 | - | BAZ2A | 12 | + |
| exon-exon | SNRPD1 | 18 | - | ZNF605 | 12 | - |
| exon-exon | ATP6V1C2 | 2 | + | LEMD2 | 6 | - |
| exon-exon | SLC5A2 | 16 | + | RUSF1 | 16 | - |
| exon-intron | PLCB3 | 11 | + | BLM | 15 | - |
| exon-exon | STX3 | 11 | + | TMEM87B | 2 | + |
| intron-exon | PAPPA | 9 | - | CSH1 | 17 | + |
| exon-exon | TOMM7 | 7 | + | TOMM7 | 7 | - |
| exon-intron | MFAP4 | 17 | + | MYO15B | 17 | + |
| exon-intron | MEF2D | 1 | - | P2RX1 | 17 | + |
| exon-intron | CSH1 | 17 | + | CSHL1 | 17 | + |
| intron-exon | LOC106627981 | 1 | + | SIRPA | 20 | - |
| intron-exon | MAN1C1 | 1 | + | RBM4 | 11 | - |
| exon-exon | CHD2 | 15 | + | COX6A1 | 12 | - |
| exon-exon | CSF1R | 5 | + | GDPD5 | 11 | + |
| intron-exon | RSU1 | 10 | + | BCL7C | 16 | - |
| exon-exon | PMS2 | 7 | + | ZEB1 | 10 | - |
| exon-intron | ADAM12 | 10 | - | LINC02018 | 3 | + |
| intron-exon | ADAM12 | 10 | - | ZNF146 | 19 | + |
| exon-exon | DCAKD | 17 | - | HECTD4 | 12 | - |
| exon-exon | ADGRG1 | 16 | - | ADGRG1 | 16 | + |
| exon-exon | CSH1 | 17 | + | CSH2 | 17 | - |
| exon-exon | INS-IGF2 | 11 | + | INS-IGF2 | 11 | - |
| intron-exon | LOC102723321 | 1 | + | GJA5 | 1 | - |
| exon-intron | GHITM | 10 | + | PTK2 | 8 | - |
| exon-exon | COL1A1 | 17 | - | COL1A2 | 7 | + |
| exon-exon | SHISA5 | 3 | - | SERINC3 | 20 | - |
| exon-exon | DAB2 | 5 | + | DAB2 | 5 | - |
| exon-exon | LOC105378179 | 14 | + | LOC105378179 | 14 | - |
| intron-exon | FOS | 14 | + | PLAC4 | 21 | - |
| exon-intron | ATG9B | 7 | - | ARRB1 | 11 | + |
| exon-intron | PDIA3 | 15 | - | ADAM12 | 10 | - |
| exon-exon | SPARC | 5 | + | FKBP9 | 7 | - |
| intron-exon | PAPPA | 9 | - | LRP2 | 2 | - |
| exon-intron | TOR1AIP2 | 1 | + | CALD1 | 7 | + |
| intron-exon | KIF13B | 8 | + | HNRNPA2B1 | 7 | + |
| exon-exon | EDARADD | 1 | + | PAPPA | 9 | + |
| exon-exon | EHMT1 | 9 | + | EHMT1 | 9 | - |
| exon-intron | METAP1D | 2 | + | YAP1 | 11 | + |
| exon-intron | TCF25 | 16 | - | C1QTNF1 | 17 | - |
| exon-intron | LINC01091 | 4 | - | AC093821.1 | 4 | - |
| exon-intron | KCTD10 | 12 | + | BMP1 | 8 | - |
| intron-exon | PSG5 | 19 | + | XRCC1 | 19 | + |
| intron-exon | HS6ST2 | X | + | CSH2 | 17 | + |
| exon-intron | TUG1 | 22 | + | ATP13A3 | 3 | - |
| exon-intron | LIMK2 | 22 | + | PSG4 | 19 | - |
| exon-exon | PSG3 | 19 | + | LHB | 19 | - |
| exon-intron | COX1 | MT | + | EVC2 | 4 | + |
| exon-intron | EPC1 | 10 | - | PCNX2 | 1 | - |
| exon-intron | PARVA | 11 | - | TTC9C | 11 | + |
| exon-exon | FGD5-AS1 | 3 | - | NOTCH2NLC | 1 | + |
| exon-intron | NOTCH2NLC | 1 | - | CAPZA2 | 7 | + |
| exon-intron | NDUFV1 | 11 | + | YEATS2 | 3 | + |
| intron-exon | DOCK2 | 5 | - | KCTD7 | 7 | + |
| exon-exon | RPS17 | 15 | + | RPS17P16 | 22 | + |
| exon-exon | NARS2 | 11 | - | HMGB2 | 4 | - |
| exon-intron | PHYKPL | 5 | - | TTC28 | 22 | - |
| intron-exon | ATRX | X | + | PURG | 8 | + |
| exon-intron | FAM239A | X | - | RGS5 | 1 | - |
| intron-exon | SLC39A11 | 17 | + | DNAJC14 | 12 | - |
| exon-intron | ZNF34 | 8 | + | LOC105375805 | 8 | - |
| intron-exon | CRIM1 | 2 | + | OR51E2 | 11 | + |
| exon-exon | EPM2AIP1 | 3 | + | HNRNPA1 | 12 | + |
| exon-exon | OTUD6B-AS1 | 8 | - | DHX29 | 5 | - |
| intron-exon | GRM1 | 6 | - | SLC44A2 | 19 | + |
| intron-exon | ACSM6 | 10 | + | GAPDH | 12 | + |
| exon-intron | FAM95B1 | 9 | - | BX664727.3 | 9 | - |
| exon-intron | HDAC3 | 5 | + | ROBO2 | 3 | - |
| exon-exon | PEBP1 | 12 | + | HS6ST1 | 2 | - |
| exon-exon | PISD | 22 | - | PISD | 22 | + |
| exon-intron | EPB41 | 1 | + | EPB41 | 1 | - |
| exon-intron | MAP3K14 | 17 | + | MAP3K14-AS1 | 17 | + |
| intron-exon | CCDC171 | 9 | + | CMAS | 12 | + |
| exon-intron | BRWD1 | 21 | - | GNAQ | 9 | + |
| intron-exon | RMDN2-AS1 | 2 | - | RMDN2 | 2 | + |
| exon-exon | TXNIP | 1 | + | KARS1 | 16 | - |
| exon-exon | RAB3IP | 12 | - | RAB3IP | 12 | + |
| exon-exon | BCAP31 | X | - | SMAD2 | 18 | - |
| exon-exon | UBE2E2 | 3 | + | BRPF3 | 6 | + |
| exon-exon | FGFR1 | 8 | - | WNK1 | 12 | + |
| exon-intron | SRRM2 | 16 | + | AC105052.4 | 7 | - |
| intron-exon | LOC105373404 | 2 | + | CABYR | 18 | + |
| exon-intron | ATP6V1C1 | 8 | - | URI1 | 19 | + |
| exon-intron | KNL1 | 15 | + | ADAMTS9-AS2 | 3 | - |
| exon-exon | ND1 | MT | - | ND1 | MT | + |
| intron-exon | EIF3B | 7 | + | COL6A6 | 3 | + |
| intron-exon | CCT6A | 7 | - | ALDH7A1 | 5 | + |
| intron-exon | FBRSL1 | 12 | + | ND4 | MT | + |
| intron-exon | METTL9 | 16 | + | ND4 | MT | + |
| intron-exon | CLNS1A | 11 | - | ACTB | 7 | - |
| exon-exon | VPS35 | 16 | - | RAB3GAP2 | 1 | + |
| intron-exon | KIAA0232 | 4 | + | USP54 | 10 | - |
| intron-exon | MTATP6P1 | 1 | + | COX3 | MT | - |
| exon-exon | COX3 | MT | - | ATP6 | MT | - |
| exon-exon | RCHY1 | 4 | + | YWHAG | 7 | - |
| exon-intron | MACROH2A1 | 5 | - | LINC02615 | 4 | - |
| exon-exon | MKKS | 20 | - | TMEM45A | 3 | - |
| intron-exon | RPS29 | 14 | - | LITAF | 16 | - |
| exon-exon | HSP90AB1 | 6 | + | EIF3C | 16 | + |
| exon-exon | RPL13A | 19 | + | PRDX1 | 1 | + |
| intron-exon | SORBS2 | 4 | + | EEF1A1 | 6 | + |
| exon-exon | DHX33 | 17 | - | DHX33 | 17 | + |
| intron-exon | LOC100507513 | 14 | + | PRXL2A | 10 | + |
| exon-intron | HIBADH | 7 | - | PDE10A | 6 | - |
| exon-exon | RPS6 | 9 | - | NARS2 | 11 | + |
| intron-exon | UHRF2 | 9 | + | CWC25 | 17 | + |
| intron-exon | ZNF25 | 10 | + | MYSM1 | 1 | + |
| exon-exon | PWWP2A | 5 | + | CYB561D1 | 1 | - |
| exon-intron | PAPOLG | 2 | - | ERBIN | 5 | - |
| intron-exon | PRKCH | 14 | - | SET | 9 | - |
| intron-exon | CSNK1G1 | 15 | + | CBX3 | 7 | + |
| intron-exon | INO80 | 15 | + | DDX17 | 22 | - |
| exon-intron | CHAMP1 | 13 | - | XRN1 | 3 | + |
| exon-exon | GABRE | X | + | GABRE | X | - |
| intron-exon | ART3 | 4 | + | RPS4X | X | - |
| exon-exon | NAPB | 20 | - | ZFP91-CNTF | 11 | + |
| exon-exon | EIF4H | 7 | - | EIF4H | 7 | + |
| intron-exon | HTT | 4 | + | ERF | 19 | + |
| intron-exon | SNED1 | 2 | - | SNED1 | 2 | + |
| exon-intron | RPS6 | 9 | - | PRKCA | 17 | + |
| exon-exon | FITM2 | 20 | - | HIGD1A | 3 | - |
| intron-exon | LOC101927815 | | + | LOC105377785 | | + |
| intron-exon | TMEM236 | | + | FAM229B | | + |
| exon-exon | GNE | 9 | + | GNE | 9 | - |
| intron-exon | FTLP3 | 20 | - | CAPN1 | 11 | + |
| intron-exon | DPH6 | | - | MYL12A | 18 | + |
| exon-exon | FKBP8 | 19 | - | PRSS23 | 11 | + |
| intron-exon | LOC111240475 | 17 | - | HSD17B1 | 17 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| exon-exon | NOL11 | 17 | - | ZNF510 | 9 | - |
| intron-exon | AC021573.1 | | + | C11orf49 | 11 | + |
| exon-exon | RPL7P32 | | + | MAGED2 | X | + |
| exon-exon | RSBN1 | 1 | + | RSBN1 | | - |
| exon-exon | LOC107986884 | | - | LOC101929470 | | - |
| intron-exon | LOC101929089 | 11 | - | KMT2A | 11 | + |
| exon-exon | EEF1A1 | 6 | + | EEF1A1P9 | 4 | + |
| exon-intron | CAPN1 | 11 | + | PPP2R2C | 4 | - |
| exon-exon | PABPC1 | 8 | + | PABPC1 | 8 | - |
| exon-exon | YBX1 | 1 | + | SMARCC1 | 3 | - |
| exon-exon | WDR75 | 2 | - | WDR75 | 2 | + |
| exon-exon | ITGB5 | 3 | + | ITGB5 | 3 | - |
| exon-exon | NECAP2 | 1 | - | NECAP2 | 1 | + |
| exon-intron | RPL6P27 | 18 | - | CYTH3 | 7 | + |
| exon-exon | MPI | | + | DDX19A | 16 | + |
| exon-exon | BFAR | 16 | - | BFAR | 16 | + |
| exon-exon | PSMB7 | 9 | + | PSMB7 | 9 | - |
| exon-exon | ATP1A1-AS1 | 1 | - | ATP1A1 | 1 | + |
| exon-exon | BTF3P10 | | - | BTF3 | 5 | + |
| intron-exon | FAM174B | 15 | - | DKC1 | | + |
| intron-exon | FN3K | | + | CERK | 22 | - |
| exon-exon | RACK1 | 5 | + | RACK1 | 5 | - |
| exon-exon | MRPL35 | 2 | + | PEPD | 19 | - |
| exon-exon | TRIP10 | 19 | - | ANXA2P2 | 9 | + |
| intron-exon | AC021573.1 | | + | C11orf49 | 11 | + |
| exon-exon | TMEM94 | 17 | + | KIF13A | 6 | - |
| exon-exon | EIF3M | 11 | - | EIF3M | 11 | + |
| exon-exon | ZFYVE16 | 5 | - | ZFYVE16 | 5 | + |
| intron-exon | PKHD1 | | - | NUDT13 | 10 | + |
| exon-exon | MALAT1 | 11 | + | CYLC2 | 9 | + |
| exon-intron | FAM153B | 5 | + | LOC100507387 | | + |
| intron-exon | AC093227.1 | | - | PATJ | 1 | + |
| exon-exon | S100A11 | 1 | + | NOL6 | 9 | - |
| exon-exon | FAM104A | 17 | + | FXR2 | 17 | - |
| exon-exon | PGAM5 | 12 | + | ZNF26 | 12 | + |
| intron-exon | MORF4L1 | 15 | + | RAB21 | 12 | + |
| exon-exon | ZNHIT6 | 1 | - | SNRPC | | + |
| exon-exon | C16orf87 | 16 | + | C16orf87 | 16 | - |
| exon-exon | NUFIP2 | 17 | + | NUFIP2 | 17 | - |
| exon-exon | KIAA0100 | 17 | + | KIAA0100 | 17 | - |
| exon-exon | MAP3K1 | | + | EEF1B2 | 2 | + |
| exon-intron | SNCG | | + | SDR42E2 | | - |
| exon-exon | HSPH1 | 13 | + | HSPH1 | 13 | - |
| exon-exon | NPRL3 | 16 | - | FYN | 6 | - |
| intron-exon | LOC643711 | 12 | + | SNX6 | 14 | - |
| exon-exon | ZNF43 | 19 | - | CKAP5 | 11 | - |
| intron-exon | LOC100506403 | 21 | - | RPS3A | 4 | + |
| exon-intron | CES1 | 16 | - | CES1P1 | | - |
| exon-exon | PPP6R1 | 19 | - | CCDC169-SOHLH2 | 13 | - |
| exon-exon | NR3C1 | 5 | + | NR3C1 | 5 | - |
| exon-intron | POLR2C | | + | FBXL20 | 17 | + |
| exon-intron | POLR1E | | + | LOC101927437 | | + |
| exon-exon | LMNB2 | | - | EIF4A1P2 | | - |
| exon-exon | CAND1 | 12 | + | GNS | 12 | - |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-intron | MYH10 | 17 | - | PUDP | X | + |
| exon-intron | NMT2 | 10 | - | IQCG | 3 | + |
| intron-exon | EVL | 14 | - | MLXP1 | | - |
| exon-exon | MOSPD2 | X | + | TBL1X | X | + |
| intron-exon | AL390728.5 | | - | LOC112268259 | 1 | - |
| exon-exon | ARPC5 | 1 | + | ARPC5 | 1 | - |
| exon-exon | RPL36 | 19 | - | ATRAID | 2 | + |
| exon-exon | SNHG16 | 17 | + | IL13RA1 | X | + |
| exon-exon | DHPS | 19 | + | DHPS | 19 | - |
| exon-exon | PDLIM1 | 10 | - | CACTIN | 19 | - |
| exon-intron | HNRNPA1 | 12 | + | TBC1D12 | 10 | + |
| exon-intron | UGDH | 4 | - | TSC22D1 | 13 | + |
| exon-intron | PSTPIP2 | 18 | - | EPG5 | 18 | - |
| exon-exon | ALDOA | 16 | - | MRPL32 | 7 | + |
| exon-intron | SUGT1 | 13 | + | AF241725.1 | | - |
| exon-intron | TMSB4X | X | + | PRRC2B | 9 | + |
| exon-intron | LOC105370613 | | - | AL133279.2 | | - |
| intron-exon | SMG1P5 | 16 | - | NUP93 | 16 | + |
| exon-exon | GDI2 | 10 | - | NDUFB7 | 19 | - |
| exon-exon | XRCC6 | 22 | - | XRCC6 | 22 | + |
| exon-intron | LOC105374445 | | + | SPESP1 | | - |
| exon-exon | SLC12A2 | 5 | - | SLC12A2 | 5 | + |
| exon-exon | CMSS1 | 3 | - | CMSS1 | 3 | + |
| exon-exon | RIF1 | 2 | + | SMC4 | 3 | + |
| exon-intron | RCN3 | | - | TRPM4 | 19 | - |
| exon-intron | RPL27 | 17 | + | RPL41P1 | 20 | + |
| exon-exon | HYAL3 | 3 | + | HYAL3 | 3 | - |
| exon-intron | AAAS | 12 | + | AC082651.1 | 2 | - |
| exon-exon | NSUN5P1 | 7 | - | FNDC3B | 3 | - |
| intron-exon | NBPF11 | 1 | - | LTBP1 | 2 | - |
| exon-intron | ND6 | MT | - | GFRA2 | 8 | - |
| exon-intron | PNPLA2 | 11 | - | LOC101927538 | 6 | - |
| exon-intron | CRTAP | 3 | - | MSRA | 8 | - |
| exon-exon | FAM182A | 20 | - | RNA45SN3 | 21 | - |
| exon-exon | GOLGA3 | 12 | + | IGFBP5 | 2 | + |
| intron-exon | POLD2P1 | 5 | - | CHST14 | 15 | - |
| intron-exon | AL136099.1 | 6 | - | LOC105378143 | 6 | - |
| exon-exon | C20orf27 | 20 | + | ARID5B | 10 | - |
| intron-exon | CRLF2 | Y | - | NHLRC2 | 10 | - |
| exon-intron | RBM6 | 3 | - | ZNF512B | 20 | + |
| exon-exon | SLC19A1 | 21 | - | DDRGK1 | 20 | + |
| intron-exon | TAF9B | X | - | PGK1 | X | - |
| exon-exon | ND4 | MT | - | ND4L | MT | - |
| exon-intron | PCOLCE | 7 | - | LOC112268284 | 21 | - |
| exon-intron | YIF1A | 11 | + | LOC105378145 | 6 | - |
| exon-exon | PRSS2 | 7 | - | GNAS | 20 | + |
| exon-intron | TCAF1P1 | 7 | - | BAIAP2L1 | 7 | - |
| exon-exon | GSN | 9 | - | KRAS | 12 | + |
| exon-exon | NEAT1 | 11 | + | KCNH2 | 7 | - |
| exon-intron | PLEKHG3 | | + | LOC102724150 | X | - |
| exon-exon | CD276 | 15 | - | INS-IGF2 | 11 | - |
| exon-intron | RPL23 | 17 | + | NECAP1 | 12 | + |
| exon-exon | CD68 | 17 | + | GM2A | 5 | + |
| exon-intron | COPG1 | 3 | - | RAB3GAP2 | 1 | + |
| exon-exon | HNRNPC | 14 | + | ERP29 | 12 | - |
| intron-exon | LOC107987267 | 19 | + | VIM | 10 | - |
| exon-exon | NORAD | 20 | + | TRAM1 | 8 | + |
| exon-exon | TRIO | 5 | + | TRIO | 5 | - |
| exon-exon | OSR2 | 8 | - | RNA45SN1 | 21 | - |
| exon-intron | MMP14 | 14 | - | ACSF2 | 17 | + |
| exon-intron | RAB29 | 1 | + | DBF4 | 7 | - |
| exon-intron | ND2 | MT | - | THRB | 3 | + |
| exon-exon | ARID4A | 14 | - | ARID4A | 14 | + |
| exon-exon | CHD4 | 12 | + | CHD4 | 12 | - |
| intron-exon | SPTY2D1OS | 11 | - | HSCB | 22 | - |
| exon-intron | CBWD1 | 9 | + | CENPP | 9 | + |
| exon-exon | RPL7P9 | 1 | + | RPL11 | 1 | - |
| exon-exon | INS-IGF2 | 11 | + | MARCHF6 | 5 | - |
| intron-exon | RFT1 | 3 | - | SFMBT1 | 3 | - |
| exon-intron | EP400P1 | 12 | + | LOC107987169 | | + |
| exon-exon | ATP8 | MT | + | ND1 | MT | + |
| intron-exon | MLLT6 | 17 | + | RRNAD1 | 1 | + |
| exon-exon | RPL37A | 2 | - | HSP90B1 | 12 | + |
| exon-exon | MALAT1 | 11 | - | TALAM1 | 11 | - |
| exon-exon | SCRT1 | | - | CLSTN3 | 12 | + |
| exon-intron | SERINC4 | 15 | - | ARR3 | X | + |
| exon-exon | ENSA | 1 | - | ABHD12 | 20 | - |
| exon-exon | CSGALNACT2 | 10 | + | CDR2 | 16 | - |
| exon-exon | ETNK1 | 12 | - | ETNK1 | 12 | + |
| intron-exon | C10orf67 | 10 | - | ZDHHC5 | 11 | - |
| exon-exon | MAD1L1 | 7 | + | MAD1L1 | 7 | - |
| intron-exon | RNASEH2B | 13 | + | PNRC1 | 6 | + |
| exon-intron | ZNF462 | 9 | + | LOC100132570 | 17 | + |
| intron-exon | SDS | 12 | + | SCARB1 | 12 | - |
| exon-exon | LOC105370185 | 13 | - | TSC22D1 | 13 | - |
| exon-exon | RNA45SN2 | 21 | - | H3-3B | 17 | - |
| exon-exon | RNA45SN3 | 21 | + | EEF1D | 8 | - |
| exon-exon | EIF1AD | 11 | - | LOC101930370 | 4 | - |
| intron-exon | EXOC4 | 7 | + | CNGB1 | | - |
| intron-exon | TMEM260 | 14 | + | PANK3 | 5 | - |
| intron-exon | RP11-1085N6.3 | | - | TMEM260 | 14 | - |
| intron-exon | ATXN1 | 6 | - | SVOP | 12 | - |
| exon-intron | UPF2 | 10 | - | TSG101 | 11 | - |
| exon-intron | ZNF528 | 19 | + | LOC107985885 | | + |
| intron-exon | SGIP1 | 1 | + | CPLX4 | 18 | - |
| exon-exon | RNA45SN2 | 21 | + | GPX3 | 5 | + |
| intron-exon | FBXO24 | 7 | - | LRCH4 | 7 | - |
| exon-exon | RPS6KA5 | 14 | - | DDX24 | 14 | - |
| exon-intron | PRKCSH | 19 | + | GSE1 | 16 | + |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| intron-exon | IGH | 14 | - | IGHA1 | 14 | - |
| exon-intron | AP3D1 | 19 | - | SLFN12L | 17 | + |
| exon-exon | ENO1 | 1 | + | CCT7 | 2 | + |
| intron-exon | GAPDHP1 | X | - | DCP1A | 3 | - |
| exon-exon | SEC23A | 14 | - | OSER1 | 20 | - |
| exon-exon | INS-IGF2 | 11 | - | EIF3C | 16 | + |
| exon-exon | ALDH7A1 | 5 | - | MRPS15 | 1 | - |
| exon-intron | SLC25A6 | Y | - | RP3-468K18.5 | 6 | - |
| exon-exon | SCARB2 | 4 | - | SERPINE1 | 7 | + |
| exon-exon | WWC3 | X | + | PRR13 | 12 | + |
| exon-exon | RRM2 | 2 | + | C2orf48 | 2 | + |
| exon-intron | KEAP1 | 19 | - | C10orf55 | 10 | - |
| exon-exon | TPX2 | 20 | + | ERGIC1 | 5 | + |
| intron-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-intron | RPL7A | 9 | + | TRAPPC6B | 14 | + |
| intron-exon | LOC112268015 | 8 | - | LOC101929709 | 8 | - |
| exon-exon | PCCB | 3 | - | RPSA | 3 | + |
| exon-intron | CNTROB | 17 | + | ZNF518A | | - |
| exon-intron | CLPTM1L | 5 | - | SLC12A7 | | + |
| exon-exon | NUMA1 | 11 | - | LSM10 | 1 | - |
| exon-intron | TTC3 | 21 | + | CPM | 12 | + |
| exon-exon | TBCC | 6 | - | TNFRSF12A | 16 | + |
| exon-exon | CTSL | 9 | + | SENP3-EIF4A1 | 17 | + |
| intron-exon | LOC105373177 | X | + | FBXL7 | 5 | + |
| exon-intron | SPEG | 2 | + | ALOX5AP | 13 | - |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-exon | RMDN3 | 15 | - | VAT1 | 17 | - |
| exon-exon | IGFBP5 | 2 | - | TMSB10 | 2 | + |
| exon-exon | SLC25A3 | 12 | + | CDC42BPB | 14 | - |
| intron-exon | RPL41P1 | 20 | - | MRPS34 | 16 | - |
| intron-exon | YWHAQP2 | 22 | + | TRAF3IP2 | 6 | - |
| exon-intron | TMEM94 | 17 | + | TAFA3 | | + |
| exon-exon | RPL35 | 9 | + | SLC43A3 | 11 | - |
| intron-exon | SNRK-AS1 | | - | PPIA | 7 | + |
| exon-intron | ATP2A2 | 12 | - | EIF6 | 20 | - |
| exon-exon | ACTN4 | 19 | + | DAB2 | 5 | - |
| exon-exon | LOC107987172 | 12 | - | LOC728715 | 12 | - |
| exon-exon | LHFPL3-AS1 | 7 | - | LOC105375436 | | - |
| exon-exon | NVL | 1 | - | RPL8 | 8 | - |
| exon-intron | APOE | 19 | - | PEBP1 | 12 | + |
| exon-exon | MYADM | 19 | - | MBD3 | 19 | - |
| exon-exon | WASF3 | 13 | + | XRN2 | 20 | + |
| exon-intron | ZC3H13 | 13 | - | MIPEP | | - |
| exon-exon | SLC39A6 | 18 | - | PTMA | 2 | + |
| exon-exon | ACTG1 | 17 | - | ACTB | 7 | - |
| exon-exon | BCL2L1 | 20 | - | TOR3A | 1 | + |
| exon-exon | OTUD5 | X | - | CHTOP | 1 | + |
| exon-exon | ZNF592 | 15 | + | HDAC1 | 1 | + |
| exon-exon | MYH9 | 22 | - | ATP6V0B | 1 | + |
| exon-exon | MUC4 | 3 | - | MAGEF1 | 3 | - |
| exon-exon | CSTB | 21 | + | TMEM147 | 19 | + |
| intron-exon | AGBL4 | 1 | - | KRTAP4-1 | | - |
| exon-exon | RPLP1P5 | | - | NBAS | 2 | - |
| exon-intron | PRDX6 | 1 | + | LOC105373909 | 2 | - |
| intron-exon | CDK14 | 7 | + | MALAT1 | 11 | + |
| intron-exon | MARK2 | 11 | + | TUBB2A | 6 | - |
| intron-exon | PTPRA | 20 | - | LAMA5 | 20 | - |
| exon-exon | LOC105377578 | 4 | - | LOC107986327 | 4 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-intron | IGHG1 | 14 | - | IGH | 14 | - |
| exon-intron | ABTB1 | | + | SLC10A1 | | + |
| exon-intron | IGKC | 2 | + | IGK | 2 | - |
| exon-intron | IGHG1 | 14 | - | IGH | 14 | - |
| exon-exon | IGHG1 | 14 | - | IGHGP | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-18 | 14 | - |
| exon-intron | SERBP1 | 1 | - | IL23R | 1 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHA1 | 14 | - |
| intron-exon | ZMIZ1 | 10 | + | CTDSP2 | 12 | - |
| intron-exon | IGH | 14 | - | IGHG2 | 14 | - |
| exon-intron | SLC16A1-AS1 | 1 | + | LOC110121184 | 1 | + |
| exon-exon | IGHG1 | 14 | - | IGHGP | 14 | - |
| exon-intron | IGHV3-23 | 14 | - | IGH | 14 | - |
| exon-exon | PKD1P5-LOC105376752 | 16 | - | PKD1P2 | 16 | + |
| exon-intron | IGLV3-21 | 22 | + | IGL | 22 | + |
| exon-exon | NFATC1 | 18 | - | NFATC1 | 18 | + |
| exon-intron | IGHV1-69 | 14 | - | IGH | 14 | - |
| exon-exon | IGLV8-61 | 22 | + | IGLL5 | 22 | + |
| exon-exon | R3HDM2 | 12 | + | CHN2 | 7 | + |
| exon-intron | IGHG1 | 14 | - | IGH | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| exon-intron | SRP54 | 14 | + | GRAMD1B | 11 | + |
| exon-exon | VIM | 10 | - | VIM | 10 | + |
| exon-exon | OTUD5 | X | - | BRD4 | 19 | - |
| exon-exon | GABRG2 | 5 | - | GABRG2 | 5 | + |
| exon-exon | PRDX1 | 1 | - | MMACHC | | - |
| exon-exon | DAZAP1 | 19 | + | FKBP8 | 19 | - |
| intron-exon | JPX | X | + | SLC2A3 | 12 | - |
| intron-exon | MAPK8IP3 | 16 | + | GGA2 | 16 | - |
| intron-exon | RASA4B | 7 | + | PLD3 | 19 | + |
| exon-exon | FBXO7 | 22 | + | LGI3 | 8 | - |
| exon-exon | HLA-B | 6 | - | HLA-C | 6 | - |
| exon-intron | TFE3 | X | + | TFE3 | X | - |
| exon-exon | CDKN1A | 6 | + | XKR4 | 8 | - |
| exon-exon | GNAS | 20 | - | GNAS | 20 | + |
| exon-exon | MRFAP1 | 4 | + | PPIA | 7 | + |
| exon-exon | CLIC4 | 1 | + | RPS25 | 11 | - |
| intron-exon | LOC105379014 | | - | PPIL3 | 2 | - |
| exon-intron | PMS2P2 | 7 | - | PMS2P6 | 7 | + |
| intron-exon | MEF2A | 15 | + | GLG1 | 16 | - |
| exon-exon | MEGF9 | 9 | + | MEGF9 | 9 | - |
| intron-exon | SPAG8 | 9 | - | PGGHG | 11 | - |
| exon-exon | RPL10P16 | 19 | + | LOC101927556 | 16 | + |
| exon-exon | BASP1 | 5 | - | BASP1 | 5 | + |
| exon-exon | LOC105369820 | 12 | - | LOC105369820 | 12 | + |
| exon-exon | PORCN | X | - | CAND1 | 12 | - |
| exon-exon | RAD1 | 5 | + | CA13 | 8 | - |
| exon-exon | LOC105375363 | 7 | - | PTPN12 | 7 | - |
| exon-exon | DOK4 | 16 | - | POLR2C | 16 | - |
| intron-exon | NUDCD3 | 7 | - | DDIT4 | 10 | - |
| exon-intron | KMT2C | 7 | + | LOC105378260 | 21 | + |
| exon-exon | NUCKS1 | 1 | + | NUCKS1 | 1 | - |
| intron-exon | SEC31A | 4 | + | ND1 | MT | + |
| exon-exon | NBPF19 | 1 | - | NBPF9 | 1 | - |
| exon-exon | WAC | 10 | - | WAC | 10 | + |
| exon-exon | SLC25A5 | X | - | ND5 | MT | + |
| intron-exon | LOC105370795 | 15 | + | TMEM87A | 15 | - |
| exon-exon | NONO | X | - | SLC35F5 | 2 | + |
| exon-exon | STMN1 | 1 | + | STMN1 | 1 | - |
| exon-exon | COA4 | 11 | + | COA4 | 11 | - |
| exon-exon | ARHGDIA | 17 | + | FMOD | 1 | + |
| exon-intron | JUND | 19 | + | LOC154761 | 7 | + |
| exon-exon | MED4 | 13 | + | TENM3 | 4 | - |
| exon-exon | TBL1X | X | - | TBL1X | X | + |
| exon-exon | IL13RA1 | X | - | SERPINE2 | 2 | + |
| exon-exon | UBE2R2 | 9 | - | UBE2R2 | 9 | + |
| exon-exon | CTSL | 9 | - | CTSL | 9 | + |
| exon-intron | CTSB | 8 | + | ALG1L11P | 8 | + |
| exon-exon | RALBP1 | 18 | - | RALBP1 | 18 | + |
| exon-exon | RP9 | 7 | + | HSP90B1 | 12 | - |
| exon-exon | PPP4R1 | 18 | + | PPP4R1 | 18 | - |
| intron-exon | LINC02141 | 16 | + | NOP58 | 2 | + |
| exon-exon | FAM91A1 | 8 | - | FAM91A1 | 8 | + |
| exon-exon | GMFG | 19 | + | KDELR1 | 19 | - |
| exon-exon | RAC1 | 7 | - | RAC1 | 7 | + |
| exon-exon | HADHA | 2 | + | HADHA | 2 | - |
| exon-exon | HINT1 | 5 | + | HINT1 | 5 | - |
| exon-exon | WDTC1 | 1 | - | HNRNPC | 14 | + |
| exon-exon | PPIA | 7 | - | COX1 | MT | - |
| intron-exon | HSP90B1 | 12 | - | HSP90B1 | 12 | + |
| intron-exon | MTND1P23 | 1 | - | ADAM9 | 8 | + |
| exon-exon | MIR4435-2HG | 2 | + | MIR4435-2HG | 2 | - |
| exon-exon | LIX1L | 1 | - | LYAR | 4 | - |
| exon-exon | RANP1 | 6 | - | RAN | 12 | + |
| exon-exon | EEF1A1P6 | 7 | + | EEF1A1 | 6 | + |
| exon-exon | RTF1 | 15 | - | RTF1 | 15 | + |
| exon-exon | ND1 | MT | - | NOL8 | 9 | - |
| exon-exon | HSP90AA1 | 14 | + | HSP90AA1 | 14 | - |
| exon-exon | RPL18 | 19 | + | NDC80 | 18 | - |
| exon-intron | MIR12136 | 1 | - | LOC107984336 | 11 | + |
| exon-exon | RBBP6 | 16 | - | RBBP6 | 16 | + |
| exon-intron | FAM98A | 2 | + | FABP3 | 1 | - |
| exon-exon | COL1A1 | 17 | + | COL1A1 | 17 | - |
| exon-exon | MALAT1 | 11 | + | CDC26 | 9 | - |
| exon-intron | NPDC1 | 9 | - | C9orf139 | 9 | - |
| intron-exon | SYP | X | - | CPB1 | 3 | + |
| intron-exon | KHDRBS1 | | - | TRAF5 | | - |
| intron-exon | MEDAG | | + | NIPAL2 | 8 | - |
| exon-exon | PCYOX1 | 2 | + | MAST3 | 19 | + |
| exon-exon | SLC29A4 | 7 | + | CFL1 | 11 | - |
| exon-exon | MECP2 | X | - | HCFC1R1 | 16 | - |
| exon-intron | RPS13 | 11 | + | PHGDH | 1 | + |
| intron-exon | USPL1 | 13 | - | HMGB1P5 | 3 | + |
| exon-intron | ESRRA | 11 | + | LAMA3 | 18 | + |
| exon-exon | TLE1 | 9 | + | EMC6 | 17 | + |
| intron-exon | RIMBP2 | 12 | + | SOX10 | | - |
| exon-exon | SNN | | - | PMPCB | 7 | + |
| intron-exon | ZNF318 | | - | RPL34P14 | | - |
| exon-exon | TMEM214 | 2 | + | SPRYD4 | 12 | + |
| intron-exon | CUX1 | 7 | + | ANPEP | 15 | - |
| exon-exon | TCF3 | 19 | - | NAA40 | 11 | + |
| exon-intron | VPS13D | 1 | + | RCC2 | 1 | - |
| intron-exon | OSCAR | | - | IRAK1 | X | - |
| intron-exon | FARS2 | 6 | + | NDN | | - |
| intron-exon | PSMA3-AS1 | 14 | - | DENR | 12 | + |
| intron-exon | TBC1D5 | 3 | + | CLU | 8 | - |
| exon-exon | S100A11 | 1 | - | RPLP0P6 | 2 | + |
| intron-exon | TRAF5 | 1 | + | RALGDS | 9 | - |
| exon-exon | RPL10P16 | 19 | - | ITPRID1 | 7 | + |
| intron-exon | GNAS-AS1 | 20 | - | ATXN2L | 16 | + |
| intron-exon | AL162427.1 | | + | LOC105376174 | | + |
| exon-intron | PCDH9 | 13 | - | DENND5A | 11 | + |
| exon-intron | RPS5 | 19 | + | XACT | X | - |
| exon-exon | S100A6 | 1 | - | ACTG1 | 17 | - |
| exon-exon | ACTN4 | 19 | + | URM1 | 9 | + |
| exon-exon | S100A11 | 1 | + | SH3BGRL3 | 1 | + |
| exon-intron | IFT22 | 7 | - | AL139807.1 | | + |
| intron-exon | RPS9P2 | 22 | - | HMG20B | 19 | + |
| exon-exon | BCAM | 19 | + | AHSA2P | 2 | + |
| exon-exon | MEPCE | 7 | + | MEPCE | 7 | - |
| exon-exon | IGLV6-57 | 22 | + | IGLL5 | 22 | + |
| exon-exon | PTMA | 2 | - | ANKRD28 | 3 | - |
| exon-exon | OR1F1 | | - | SRRM2 | 16 | - |
| exon-intron | LINC00824 | 8 | - | PTER | 10 | - |
| exon-exon | PVT1 | 8 | + | LINC00824 | 8 | - |
| exon-exon | HEATR4 | 14 | - | EEF1A1P5 | 9 | + |
| exon-exon | ACTG1 | 17 | + | ACTG1 | 17 | - |
| exon-exon | RNU6-9 | 19 | + | UBAP2 | 9 | - |
| exon-exon | CTDNEP1 | 17 | - | ZDHHC9 | X | - |
| exon-intron | LARP7 | 4 | + | WRBP1 | | + |
| exon-intron | ZNF629 | | - | RNF40 | | - |
| exon-intron | ZCCHC7 | | + | LOC105370194 | | + |
| exon-exon | SPTAN1 | 9 | + | RBFOX2 | 22 | - |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-intron | IRAK1 | X | - | LINC01189 | | + |
| exon-exon | LOC100129034 | 9 | + | EEF1D | 8 | - |
| exon-exon | TRAPPC10 | 21 | - | LOC102724200 | 21 | - |
| exon-intron | OIP5-AS1 | 15 | + | OIP5 | | + |
| exon-intron | SOD1 | 21 | + | ZIM2-AS1 | 19 | + |
| exon-intron | LOC107986700 | | - | CHN2 | 7 | - |
| exon-intron | RPL9 | 4 | - | UBE2Q2P2 | 15 | - |
| exon-exon | RPS12 | 6 | - | KRT7 | 12 | + |
| exon-exon | GNL3 | 3 | - | GNL3 | 3 | + |
| exon-exon | PEX14 | 1 | - | SFPQ | 1 | - |
| intron-exon | COPG2 | 7 | + | COPG2IT1 | | + |
| intron-exon | GOLGA3 | 12 | - | CREB3L1 | 11 | + |
| intron-exon | LINC02067 | 3 | + | ACTG1 | 17 | - |
| exon-intron | TPM4 | 19 | + | LOC107986356 | 5 | + |
| intron-exon | RP11-499F3.2 | 15 | - | DHX8 | 17 | + |
| intron-exon | LOC107984205 | | + | SFT2D2 | | + |
| intron-exon | LOC105371574 | 17 | + | MGAT4B | 5 | - |
| exon-exon | DAZAP1 | 19 | + | NDE1 | 16 | + |
| exon-exon | TRAPPC10 | 21 | - | LOC102724200 | 21 | - |
| exon-exon | MINDY1 | 1 | - | ANXA9 | 1 | - |
| intron-exon | AC024230.1 | | + | LOC105374511 | | + |
| intron-exon | CASC15 | 6 | - | PTOV1 | 19 | + |
| exon-exon | TBC1D2B | 15 | - | YIPF1 | 1 | - |
| exon-intron | RPL7A | 9 | + | TSTD3 | 6 | + |
| exon-exon | CCZ1 | 7 | - | CCZ1B | 7 | - |
| exon-intron | UBE4B | 1 | + | ZNF587 | 19 | + |
| exon-intron | F8A3 | | - | LOC106146152 | | - |
| exon-exon | ESYT2 | 7 | - | ENO1 | 1 | - |
| intron-exon | SPAG5 | 17 | - | MAPKBP1 | 15 | + |
| intron-exon | SORBS2 | 4 | - | PDLIM5 | 4 | + |
| intron-exon | CSNK1G2 | 19 | + | MOB3A | 19 | + |
| intron-exon | ZNF131 | 5 | + | SPARC | 5 | - |
| exon-intron | ABCA2 | 9 | - | CHMP1A | 16 | - |
| exon-exon | ZNF646 | 16 | - | RPS3A | 4 | + |
| exon-exon | CCDC43 | 17 | - | LOC105371792 | 17 | + |
| exon-intron | NR4A2 | | - | CACNA1H | 16 | + |
| exon-intron | EWSAT1 | | + | AC027088.2 | | + |
| exon-exon | SLC25A5 | X | - | RPL9P8 | 15 | - |
| intron-exon | LINC02067 | 3 | + | CTSD | 11 | - |
| exon-exon | ERRFI1 | 1 | - | EEF1A1 | 6 | - |
| exon-exon | BRD7 | 16 | - | RPS3AP6 | 15 | + |
| exon-exon | IFNAR1 | 21 | + | RPS27A | 2 | + |
| intron-exon | DTX2P1-UPK3BP1-PMS2P11 | 7 | + | PMS2P9 | | + |
| exon-exon | KDM5C | X | + | CCDC124 | 19 | + |
| exon-intron | HSPBP1 | 19 | - | MIATNB | 22 | + |
| exon-exon | CAPNS1 | 19 | + | HMGN2 | 1 | + |
| intron-exon | MYCBP2 | 13 | - | NAT8L | 4 | + |
| exon-intron | HSPA9 | 5 | - | OR9Q1 | | - |
| intron-exon | MBD3 | | - | MRTFB | 16 | + |
| exon-exon | FTH1 | 11 | - | CDC16 | 13 | + |
| exon-intron | AGO2 | 8 | + | MECOM | 3 | - |
| intron-exon | C12orf54 | | - | DCXR | 17 | - |
| exon-intron | PTGDS | 9 | + | GJB7 | 6 | - |
| intron-exon | LOC107986294 | | + | PDRG1 | 20 | - |
| exon-exon | RPS16 | 19 | + | MRPL33 | 2 | + |
| exon-exon | HNRNPA1P12 | | - | RERE | 1 | + |
| exon-exon | ZBTB4 | 17 | - | C6orf62 | 6 | - |
| intron-exon | PTK2 | 8 | - | SMCO4 | | - |
| intron-exon | AC092115.3 | | + | NOB1 | | + |
| exon-exon | KRT8 | 12 | - | KRT5 | 12 | - |
| exon-exon | RPS15AP1 | | - | BTBD6 | | + |
| exon-intron | RPL7A | 9 | + | SMOC1 | 14 | - |
| exon-exon | TLE1 | 9 | - | SENP3-EIF4A1 | 17 | + |
| intron-exon | PCGF3 | 4 | - | NCOA1 | 2 | + |
| exon-exon | CAPNS1 | 19 | + | IGSF9 | 1 | - |
| exon-intron | ERCC6L | | - | PIN4 | X | - |
| exon-exon | CAPNS1 | 19 | + | NOMO2 | 16 | - |
| exon-exon | E2F1 | 20 | - | RDH11 | 14 | - |
| exon-exon | GNAS | 20 | - | FAM218A | 4 | + |
| exon-exon | BICD2 | 9 | - | BICD2 | 9 | + |
| exon-exon | INIP | 9 | + | INIP | 9 | - |
| exon-intron | SLC33A1 | 3 | - | COLEC12 | 18 | - |
| exon-exon | AGPAT4 | 6 | - | AGPAT4 | 6 | + |
| exon-intron | DLK1 | 14 | + | MED4 | 13 | - |
| exon-exon | RPS24P2 | | - | RPS24 | 10 | + |
| exon-intron | ND3 | MT | - | EEF1B2 | 2 | + |
| exon-intron | ATP6V0A2 | | + | ZNF664-RFLNA | 12 | + |
| exon-exon | INS-IGF2 | 11 | + | SQSTM1 | 5 | + |
| exon-exon | RPS27A | 2 | - | MKRN1 | 7 | + |
| exon-exon | LOC105374464 | | + | CDC42EP3 | 2 | + |
| exon-exon | OLFM1 | 9 | - | OLFM1 | 9 | + |
| intron-exon | MGAT5 | 2 | + | SENP2 | 3 | + |
| exon-intron | TAGLN | 11 | + | POM121C | 7 | + |
| exon-exon | LINC00664 | 19 | + | ZNF429 | 19 | + |
| exon-exon | LOC100505918 | 1 | - | LNPEP | 5 | + |
| intron-exon | DOC2B | | + | RSPO3 | 6 | + |
| exon-exon | SLC43A3 | 11 | - | PRG2 | 11 | - |
| exon-intron | VARS1 | 6 | + | TOP1MT | 8 | - |
| exon-intron | RPL10AP6 | 3 | - | PTPRG | 3 | - |
| exon-intron | ENSA | 1 | - | LOC107985203 | | - |
| exon-intron | LOC728673 | | + | CNTNAP3P1 | | + |
| exon-intron | LOC105373785 | 2 | - | MED28P3 | | - |
| exon-intron | ANKRD12 | 18 | + | IKBKB | 8 | + |
| intron-exon | RAVER1 | 19 | - | SYNCRIP | 6 | - |
| exon-exon | LOC107984198 | | + | AKR1C3 | 10 | + |
| exon-exon | IDH1 | 2 | - | RPS24 | 10 | + |
| exon-exon | ZNF644 | 1 | - | PTMA | 2 | + |
| exon-intron | ACIN1 | 14 | + | LOC107984665 | | + |
| exon-exon | HNRNPA2B1 | 7 | - | PTMA | 2 | + |
| exon-intron | GAPDH | 12 | + | MOB1B | 4 | - |
| exon-exon | RARA | 17 | + | BRD4 | 19 | - |
| exon-exon | ACTR2 | 2 | + | ZNF621 | 3 | + |
| intron-exon | RTKN2 | 10 | + | LINC02621 | | + |
| exon-exon | ITPKB | 1 | + | ITPKB | 1 | - |
| exon-exon | YIPF4 | 2 | + | CNIH4 | 1 | + |
| exon-exon | VPS18 | 15 | - | VPS18 | 15 | + |
| exon-exon | OSBPL9P1 | | - | OSBPL9 | 1 | + |
| exon-exon | GCNT2 | 6 | - | GCNT2 | 6 | + |
| intron-exon | CEP164 | | - | LINC00488 | | - |
| exon-exon | SGO1-AS1 | | + | SGO1 | 3 | + |
| exon-exon | BEX3 | X | + | HSPA5 | 9 | - |
| exon-intron | RPS4X | X | - | CADPS2 | 7 | - |
| exon-exon | RNA45SN2 | 21 | + | CALR | 19 | + |
| exon-intron | PSTPIP2 | 18 | - | LOC105372093 | 18 | - |
| exon-exon | RNA45SN2 | 21 | + | KDM4A | 1 | + |
| exon-exon | ZC3H6 | 2 | - | ZC3H6 | 2 | + |
| exon-exon | EEF1A1P5 | 9 | + | PSMA4 | 15 | + |
| exon-exon | AKR1B10 | 7 | + | AKR1B15 | | + |
| exon-exon | ACTG1 | 17 | - | GNAS | 20 | + |
| exon-exon | CCT5 | 5 | - | CCT5 | 5 | + |
| exon-exon | CREBL2 | 12 | - | CREBL2 | 12 | + |
| exon-exon | ESCO1 | 18 | - | MGRN1 | 16 | + |
| exon-intron | EIF4EBP2 | 10 | + | LINC02208 | | + |
| exon-intron | RAB10 | | + | RPS15P4 | 2 | - |
| intron-exon | METTL7AP1 | 12 | + | KRT7 | 12 | + |
| exon-exon | TBC1D24 | | + | MAGT1 | X | - |
| intron-exon | GGACT | 13 | - | TPM4 | 19 | + |
| exon-intron | KLC1 | 14 | + | LINC00637 | | + |
| intron-exon | AL590787.1 | | + | NUP58 | 13 | + |
| exon-intron | RPL7A | 9 | + | SMOC1 | 14 | - |
| exon-exon | SLC2A3P1 | 5 | - | TMSB10 | 2 | + |
| exon-exon | DENND10P1 | | - | DENND10 | | + |
| exon-exon | PFN2 | 3 | - | COPE | 19 | - |
| exon-exon | AP1S3 | 2 | - | PDSS2 | 6 | - |
| exon-exon | KHDRBS1 | | - | HSP90B1 | 12 | + |
| exon-exon | RBM27 | 5 | - | RBM27 | 5 | + |
| intron-exon | LOC105372310 | 19 | - | ATP5F1A | 18 | - |
| intron-exon | CCDC200 | 17 | + | DPY19L2P2 | | - |
| intron-exon | LINC01035 | | + | LOC105371657 | | + |
| exon-exon | DDX17 | 22 | + | DDX17 | 22 | - |
| exon-exon | SLC25A22 | | + | AGPAT5 | | + |
| exon-exon | AP3D1 | 19 | - | HSP90AA1 | 14 | - |
| exon-intron | LOC105371675 | | - | CFHR4 | | - |
| exon-exon | PAXIP1-AS1 | 7 | + | SEC63 | 6 | - |
| exon-exon | SRI | 7 | - | CAVIN1 | 17 | - |
| exon-exon | AVPI1 | | - | PI4K2A | 10 | - |
| exon-exon | NDUFA6 | 22 | + | YARS1 | 1 | - |
| exon-exon | MAZ | 16 | + | PFN1 | 17 | - |
| exon-exon | KPNB1 | 17 | - | KPNB1 | 17 | + |
| exon-intron | MRPS21 | 1 | + | RPS5 | 19 | + |
| exon-exon | RCBTB2 | 13 | - | RPUSD3 | 3 | - |
| exon-intron | PRR11 | 17 | + | LOC105373643 | 2 | - |
| exon-exon | ATP5F1B | 12 | + | ATP5F1B | 12 | - |
| exon-exon | RPLP0 | 12 | + | RPLP0P2 | 11 | + |
| exon-exon | CSNK1D | 17 | - | PPIAP22 | 21 | + |
| intron-exon | CEP170 | 1 | - | FAM234B | 12 | + |
| exon-exon | ZNF280C | X | - | ZNF331 | 19 | + |
| exon-intron | MKX | | - | SLC2A5 | 1 | + |
| exon-exon | LOC728715 | | - | LINC02367 | | - |
| exon-exon | CDC42EP3 | 2 | + | CDC42EP3 | 2 | - |
| exon-exon | LINC01531 | | + | LOC101927522 | | + |
| exon-exon | TRAPPC4 | 11 | + | UBP1 | 3 | - |
| exon-exon | TAF15 | 17 | + | AP2B1 | 17 | + |
| exon-exon | GBA | 1 | - | GBAP1 | 1 | - |
| intron-exon | STT3A-AS1 | 11 | - | GTF2H4 | 6 | + |
| exon-exon | RPL38 | 17 | - | RCC2 | 1 | - |
| exon-exon | RPL41 | 12 | + | ODC1 | 2 | - |
| exon-intron | SNRPD2 | 19 | - | C2orf74 | 2 | + |
| exon-exon | SERPINE1 | 7 | - | AP2S1 | 19 | - |
| exon-intron | RPS27A | 2 | + | MFF | 2 | + |
| exon-exon | CBX5 | 12 | - | TOP3A | 17 | - |
| exon-intron | RNU6-9 | 19 | + | EIF4G1 | 3 | + |
| exon-exon | TRIM33 | 1 | + | TRIM33 | 1 | - |
| exon-exon | CERS5 | 12 | - | NPL | 1 | + |
| exon-exon | GNL1 | 6 | + | PRR3 | 6 | + |
| exon-intron | MINDY2 | 15 | + | RIN3 | 14 | - |
| exon-exon | MRPL13 | | - | GLUL | 1 | - |
| exon-exon | PPP1R11 | 6 | - | PPP1R11 | 6 | + |
| exon-intron | HCP5 | 6 | - | HLA-X | 6 | - |
| exon-intron | TAF1B | | + | AC010969.2 | | + |
| exon-intron | GAPDH | 12 | + | RNF185 | 22 | - |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-exon | PSMC3 | 11 | - | POLR2D | 2 | - |
| exon-intron | NUS1 | 6 | + | TRPC1 | 3 | + |
| exon-exon | PTMS | 12 | + | RPL7A | 9 | + |
| exon-exon | LOC107984198 | | + | AKR1C3 | 10 | + |
| exon-intron | SELENOW | 19 | - | RPS11 | 19 | + |
| exon-exon | HSPA1A | 6 | + | HSPA1B | 6 | + |
| exon-exon | NOC2L | 1 | - | NOC2L | 1 | + |
| exon-intron | AKR1C1 | 10 | + | AKR1C3 | 10 | + |
| exon-exon | GLOD4 | 17 | + | GLOD4 | 17 | - |
| exon-intron | PTMA | 2 | + | XIAP | X | + |
| exon-exon | SNRPG | 2 | - | NOMO1 | 16 | + |
| exon-intron | LOC107987063 | 9 | + | AL162231.2 | 9 | + |
| intron-exon | TATDN1 | | + | BLOC1S6 | 15 | + |
| exon-exon | EIF4G2 | 11 | + | EIF4G2 | 11 | - |
| exon-intron | DCTN5 | | + | DGKZ | 11 | - |
| exon-intron | SPR | 2 | + | TTC28 | 22 | - |
| exon-intron | FTH1 | 11 | - | CPB1 | 3 | - |
| exon-exon | NQO1 | 16 | + | NQO1 | 16 | - |
| exon-exon | GNL1 | 6 | + | GNL1 | 6 | - |
| exon-intron | PSMA7 | 20 | - | FDX1 | 11 | + |
| exon-exon | COX6B1 | 19 | - | RPS7 | 2 | + |
| exon-exon | PSMA4 | 15 | + | PSAP | 10 | - |
| exon-exon | MAGED2 | X | - | GHITM | 10 | + |
| exon-intron | RPLP2 | 11 | + | OSBP2 | 22 | - |
| exon-exon | HSPBP1 | 19 | - | SF3B2 | 11 | + |
| exon-intron | CLPTM1L | 5 | - | SLC12A7 | | + |
| exon-intron | RPS20 | 8 | + | NME1-NME2 | 17 | + |
| exon-exon | KIF18B | 17 | - | CALR | 19 | + |
| exon-exon | TUBA1C | 12 | - | TAP2 | 6 | - |
| exon-exon | LOC105373467 | 1 | + | TUBGCP6 | | - |
| exon-exon | TTC19 | 17 | + | NCOR1 | 17 | - |
| exon-intron | SLC25A15 | 13 | + | FAM168A | 11 | - |
| intron-exon | IQCG | 3 | - | ENO1 | 1 | - |
| exon-exon | CAMKK1 | 17 | + | CAMKK1 | 17 | - |
| exon-intron | PFKL | 21 | + | LOC111099028 | | + |
| exon-intron | BROX | 1 | + | SLC2A10 | 20 | + |
| exon-exon | UBE2Z | 17 | - | UBE2Z | 17 | + |
| intron-exon | RP11-335O4.3 | | - | DYRK2 | 12 | - |
| exon-exon | KDM5C | X | - | UBTD2 | 5 | - |
| exon-exon | PSME4 | 2 | + | RPL7P9 | 1 | - |
| exon-exon | COL7A1 | 3 | + | CES4A | 16 | + |
| exon-intron | RNA45SN2 | 21 | + | RNR2 | MT | + |
| intron-exon | RABGAP1L | 1 | + | LOC105371622 | 1 | + |
| exon-exon | TPD52 | 8 | - | ATAD2 | 8 | - |
| exon-exon | RNU6-7 | 14 | + | IQGAP1 | 15 | + |
| exon-intron | IL18BP | | + | NUMA1 | 11 | + |
| exon-exon | CHD4 | 12 | + | CHD4 | 12 | - |
| exon-exon | UPF3B | X | - | PAX5 | 9 | - |
| exon-exon | RUNX3 | 1 | - | RUNX3 | 1 | + |
| exon-exon | RELT | 11 | + | NADSYN1 | 11 | + |
| exon-intron | MECR | | - | EIF2B3 | 1 | + |
| exon-intron | SPRED3 | | + | NTM | 11 | + |
| intron-exon | LOC100130801 | 9 | - | LOC107987047 | 9 | - |
| intron-exon | LOC112268284 | 21 | - | RPA2 | 1 | - |
| exon-exon | PTMS | 12 | + | GNB1 | 1 | - |
| intron-exon | IPO11 | 5 | + | RFFL | 17 | - |
| exon-exon | FTH1 | 11 | - | PRELID1 | 5 | + |
| exon-exon | HCG11 | | + | YES1 | 18 | - |
| exon-exon | FTH1 | 11 | - | EIF5A | 17 | + |
| exon-exon | GAPDH | 12 | - | RPUSD1 | | - |
| exon-intron | CMBL | 5 | - | H2AC6 | 6 | + |
| exon-exon | VPS26A | 10 | - | VPS26A | 10 | + |
| intron-exon | CCDC51 | 3 | - | DCTPP1 | 16 | - |
| exon-intron | CHRFAM7A | 15 | - | CHRNA7 | | - |
| exon-exon | GNAI3 | 1 | - | GNAI3 | 1 | + |
| exon-exon | ATP5PB | | - | ATP5PB | 1 | + |
| exon-exon | HMGN3 | 6 | + | RPL29 | 3 | - |
| exon-intron | USP22 | 17 | - | MEF2C | 5 | - |
| exon-exon | STAU1 | 20 | + | STAU1 | 20 | - |
| intron-exon | KIFC3 | 16 | - | FASTKD2 | 2 | + |
| exon-exon | MAP4K4 | 2 | + | RC3H2 | 9 | - |
| exon-exon | LITAF | 16 | + | COPE | 19 | - |
| exon-exon | PSME3 | 17 | + | LMNB2 | 19 | - |
| exon-exon | RPL11 | 1 | - | PPIAP22 | 21 | + |
| exon-exon | DHRS4 | 14 | + | DHRS4L2 | 14 | + |
| exon-intron | RPS26P8 | | + | DAZ1 | | + |
| exon-intron | ERF | 19 | - | ZNF331 | 19 | - |
| exon-intron | CCDC186 | | - | AP003385.1 | | + |
| exon-exon | TBRG4 | 7 | - | RPS29 | 14 | - |
| exon-intron | PDXK | 21 | + | GREB1L | 18 | + |
| intron-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-intron | LOC105374363 | | + | EIF2B4 | | + |
| exon-intron | SEL1L | 14 | - | AC092364.1 | 19 | + |
| exon-exon | KMT5B | 11 | - | COX4I1 | 16 | + |
| intron-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-exon | USP13 | 3 | + | RPS12 | 6 | + |
| exon-intron | ATP5F1A | 18 | - | RNF165 | | - |
| exon-exon | SSR4 | X | + | EEF1A1 | 6 | - |
| exon-intron | RPS23 | 5 | - | GRIP1 | 12 | + |
| intron-exon | IL4I1 | 19 | - | CSTB | 21 | - |
| exon-exon | TTC1 | 5 | + | SAPCD2 | 9 | - |
| exon-intron | CFL1 | 11 | - | SLC9C1 | | - |
| exon-intron | CSE1L | 20 | + | EFCAB6 | 22 | - |
| exon-intron | RAE1 | 20 | + | WWOX | 16 | - |
| exon-exon | PDIA4 | 7 | - | TUBB4B | 9 | + |
| exon-exon | YBX1 | 1 | + | NCBP2 | 3 | - |
| exon-exon | CLNS1A | 11 | + | CLNS1A | 11 | - |
| exon-intron | NOMO3 | | + | TSPAN9 | 12 | - |
| exon-exon | MAGOHB | 12 | - | TAGLN2 | 1 | - |
| exon-intron | EEF1A1P6 | 7 | - | AC022558.2 | | + |
| exon-exon | TLE5 | 19 | + | TUBB | 6 | + |
| exon-intron | LOC112268154 | | - | AC060814.5 | | - |
| exon-exon | RAB4B-EGLN2 | 19 | + | SHOC2 | 10 | + |
| exon-exon | HSP90AB1 | 6 | + | PTMA | 2 | + |
| exon-exon | FTL | 19 | + | TIMP2 | 17 | - |
| exon-intron | ATOX1 | 5 | - | GLB1L2 | 11 | + |
| intron-exon | AC145343.1 | 17 | - | FBXO36P1 | 17 | - |
| exon-exon | C20orf27 | 20 | - | PSMD4 | 1 | + |
| intron-exon | PLEKHA7 | 11 | + | TBK1 | | - |
| exon-intron | ATP5F1D | 19 | + | BCAS3 | 17 | + |
| exon-exon | SPEN | 1 | - | RPLP0P6 | 2 | + |
| exon-exon | SBDSP1 | 7 | + | MCM7 | 7 | - |
| exon-intron | TRUB2 | 9 | - | SWI5 | 9 | - |
| exon-intron | TFF1 | 21 | + | RPS10-NUDT3 | 6 | - |
| exon-intron | SKP1 | 5 | - | GMDS | 6 | + |
| exon-intron | TRMO | | - | TMOD1 | 9 | - |
| exon-exon | TSPAN31 | 12 | + | RPL32 | 3 | - |
| exon-exon | NPIPB15 | 16 | + | CPNE1 | 20 | - |
| exon-exon | CDK5RAP2 | 9 | + | CDK5RAP2 | 9 | - |
| exon-exon | TMSB10 | 2 | + | RPL4 | 15 | - |
| exon-exon | EIF4H | 7 | + | PKP3 | 11 | + |
| exon-exon | LIME1 | 20 | + | SLC2A4RG | 20 | + |
| exon-intron | MLEC | 12 | + | RBFOX1 | 16 | - |
| exon-exon | LOC102725254 | | + | PDE4C | 19 | + |
| exon-intron | BANF1P3 | | - | CAB39 | 2 | - |
| exon-exon | PDCD6IP | 3 | - | LOC105377023 | 3 | - |
| exon-exon | LOC105370449 | 14 | + | LOC112268123 | | - |
| exon-exon | IBTK | 6 | - | SRP54 | 14 | + |
| exon-exon | APLP2 | 11 | + | EIF2S2 | 20 | - |
| exon-exon | YIPF2 | 19 | - | PAICS | 4 | + |
| exon-intron | RUSF1 | 16 | - | FBL | 19 | - |
| exon-exon | RPS15P4 | 2 | + | FBL | 19 | - |
| intron-exon | BCL2L2-PABPN1 | 14 | + | CD81 | 11 | + |
| exon-exon | XPO6 | 16 | + | XPO6 | 16 | - |
| exon-exon | G6PC3 | 17 | - | EIF3L | 22 | + |
| exon-intron | LOC105376890 | | - | AL590640.1 | | - |
| exon-intron | H2AZ1 | 4 | + | H2AZ1-DT | | + |
| intron-exon | LINC00469 | 17 | + | LINC02092 | 17 | + |
| exon-exon | CDK14 | 7 | + | MIPOL1 | 14 | + |
| exon-exon | CCNE2 | 8 | - | HSPH1 | 13 | - |
| exon-intron | CHODL | 21 | + | PKM | 15 | + |
| exon-intron | TXN | 9 | - | AGAP7P | 10 | - |
| exon-intron | KRT14 | 17 | - | RNF157 | | + |
| exon-intron | SLC33A1 | 3 | - | CLEC16A | 16 | - |
| exon-intron | RNF10 | 12 | + | ZNF735 | 7 | - |
| exon-intron | KPTN | 19 | - | LOC102723930 | 16 | + |
| exon-exon | CDC42SE1 | 1 | - | CDC42SE1 | 1 | + |
| exon-intron | CORO1B | | - | DPY19L1 | 7 | + |
| exon-exon | PYM1 | 12 | - | OAZ1 | 19 | + |
| exon-intron | TAPT1 | | - | KCNQ5 | 6 | + |
| exon-exon | PHACTR1 | 6 | + | RPL22P18 | | + |
| exon-exon | NEK6 | 9 | - | EIF3LP2 | 10 | + |
| exon-exon | RPLP1P4 | 2 | - | RPL13AP5 | 10 | + |
| exon-intron | SLC25A6 | Y | - | NBEAP3 | 22 | + |
| exon-exon | APOBEC3F | 22 | + | WDR70 | 5 | + |
| exon-exon | EXD2 | 14 | + | FAM162A | 3 | + |
| exon-exon | RPS9 | 19 | + | EDF1 | 9 | - |
| exon-intron | MUC1 | 1 | - | TRPM7 | 15 | + |
| exon-exon | SKA2 | 17 | - | FAU | 11 | - |
| exon-intron | RPS28 | 19 | + | LINC00571 | 13 | + |
| exon-intron | RPL39 | X | - | RERE | 1 | + |
| exon-exon | COMMD5 | 8 | - | SEPTIN8 | 5 | - |
| exon-intron | EIF4A3 | | - | RB1 | 13 | + |
| exon-intron | GOLGA2 | 9 | - | ATG4D | | - |
| exon-exon | RPLP0 | 12 | - | RPS29 | 14 | - |
| exon-intron | RPS8 | 1 | + | TUBB2B | 6 | - |
| exon-exon | SCAND1 | 20 | - | PCNP | 3 | - |
| exon-intron | NDUFB9 | 8 | + | AC008537.1 | | - |
| exon-exon | NORAD | 20 | - | PTMAP5 | 13 | + |
| exon-intron | NUP35 | | + | AC021851.1 | 2 | + |
| intron-exon | LCORL | 4 | - | RPL24 | 3 | - |
| intron-exon | GAS2 | 11 | - | NAMPT | 7 | - |
| exon-exon | MGAT4C | 12 | - | LINC02864 | 18 | - |
| exon-exon | CAMSAP2 | 1 | + | ANKRD36 | 2 | + |
| intron-exon | OPN3 | | - | KMO | 1 | - |
| exon-exon | LOC107984025 | 15 | + | PRM2 | 16 | - |
| intron-exon | LOC101929431 | | + | CCDC7 | 10 | + |
| intron-exon | TTI2 | 8 | - | SLC9C2 | 1 | - |
| exon-intron | PEG10 | 7 | + | UBP1 | 3 | - |
| exon-exon | LINC01427 | | - | LOC105372561 | 20 | - |
| exon-exon | SKP1 | 5 | - | DCAF8L2 | X | + |
| exon-exon | HPD | 12 | + | LOC105370035 | | + |
| exon-intron | LOC105371958 | 18 | - | AP005230.1 | 18 | - |
| intron-exon | PKP4 | 2 | + | TPR | 1 | - |
| exon-exon | LOC105370203 | 13 | - | MLNR | | - |
| exon-exon | LOC105379499 | 21 | - | RAD21 | 8 | - |
| intron-exon | RGS22 | 8 | - | LDHC | 11 | + |
| exon-exon | S100A7A | 1 | - | S100A8 | 1 | - |
| exon-intron | ANKRD20A3P | | - | BX664727.3 | 9 | + |
| exon-exon | ENY2 | 8 | + | UPF2 | 10 | - |
| intron-exon | NUDCD1 | 8 | + | ENY2 | 8 | + |
| exon-exon | PPA1 | 10 | - | TMEM50B | 21 | - |
| intron-exon | AC027613.1 | | - | RLFP1 | | - |
| exon-intron | TMSB4X | X | + | CCSER1 | 4 | - |
| exon-exon | LINC01911 | | + | LOC105373668 | | + |
| intron-exon | LOC105372663 | | + | MTPAP | 10 | - |
| exon-exon | CSE1L | 20 | + | CSE1L | 20 | - |
| exon-exon | ND4L | MT | - | DLK1 | 14 | - |
| intron-exon | AL512662.2 | | + | SFTPD | | + |
| exon-exon | PTPN2 | 18 | - | TAOK2 | 16 | + |
| exon-intron | HMGA2-AS1 | 12 | - | HMGA2 | 12 | - |
| exon-exon | NID1 | 1 | - | SQOR | 15 | + |
| exon-intron | KREMEN1 | 22 | + | BTRC | 10 | - |
| exon-intron | LIMK2 | 22 | + | LOC101928762 | 16 | + |
| exon-exon | IGLL5 | 22 | - | IGLV3-25 | 22 | - |
| intron-exon | TPTEP2 | 22 | - | CSNK1E | 22 | - |
| exon-intron | LOC100113375 | | - | ATXN10 | | - |
| exon-intron | CCDC134 | 22 | + | LOC101929563 | | + |
| exon-intron | PES1 | 22 | - | USP30 | 12 | - |
| exon-intron | CLTCL1 | 22 | - | LAMTOR4 | 7 | + |
| exon-exon | RPS18 | 6 | + | EIF4A3 | 17 | - |
| exon-intron | ARF5 | 7 | + | GEMIN7 | 19 | + |
| exon-exon | DHCR7 | | - | RPL19 | 17 | + |
| exon-exon | OAZ1 | 19 | + | PYGB | 20 | + |
| exon-intron | IMPA1 | | - | SMG1P3 | 16 | + |
| intron-exon | PRKDC | 8 | - | SLC38A2 | 12 | - |
| exon-intron | RPS8 | 1 | + | ZNF627 | 19 | + |
| exon-exon | CCNK | 14 | + | RPS17P16 | 22 | + |
| exon-exon | ACTB | 7 | - | KRT8 | 12 | - |
| exon-exon | PSMC1P1 | 3 | + | GNPTG | 16 | + |
| exon-exon | PSMC3 | 11 | - | CDC42 | 1 | + |
| exon-intron | RPL23A | 17 | + | SLC25A24 | | - |
| exon-intron | PEMT | 17 | + | AC020558.1 | | + |
| exon-intron | HNRNPR | 1 | - | KDM1A | 1 | - |
| exon-exon | RPL39 | X | - | NXN | 17 | - |
| exon-exon | SET | 9 | + | LOC112267858 | 7 | - |
| exon-exon | ULBP3 | 6 | - | REV1 | 2 | - |
| exon-intron | BCAP31 | X | - | RBFOX1 | 16 | - |
| intron-exon | LOC102723543 | 1 | - | ATP2B4 | 1 | + |
| exon-intron | DBI | 2 | + | AC083837.1 | | + |
| exon-exon | CALR | 19 | + | RPS8P9 | | - |
| exon-exon | RPS9 | 19 | + | PSMD4 | 1 | + |
| exon-intron | AGR2 | 7 | - | MEA1 | 6 | - |
| exon-exon | MIF-AS1 | 22 | + | MIF | 22 | + |
| exon-exon | COX7A2 | 6 | - | RPS2 | 16 | - |
| exon-exon | FTH1 | 11 | - | H3P6 | 2 | + |
| exon-exon | TUBA1B | 12 | - | TAF1D | 11 | - |
| exon-intron | PCLAF | 15 | + | AC087632.2 | | + |
| exon-intron | TMSB4X | X | + | PRORP | 14 | - |
| intron-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-exon | MRPL23 | 11 | + | UBB | 17 | + |
| exon-intron | KLRC3 | | - | LINC01220 | | + |
| exon-intron | LOC107985535 | | - | BX324167.1 | | - |
| exon-exon | FRMD6 | 14 | + | TAF1D | 11 | - |
| intron-exon | SLC6A16 | 19 | + | CD37 | 19 | + |
| exon-intron | LOC107986951 | | - | AC083967.1 | | - |
| intron-exon | RNU6-3P | X | - | PCBP1 | 2 | + |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-exon | SET | 9 | + | HSP90AA1 | 14 | - |
| exon-intron | MYL12A | 18 | + | MYL12B | 18 | + |
| intron-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-intron | SNRPG | 2 | - | POLE2 | | - |
| exon-exon | IWS1 | 2 | - | SREK1 | 5 | + |
| exon-exon | MATR3 | 5 | + | PURA | | + |
| exon-intron | BSG | 19 | + | BPIFC | 22 | + |
| exon-exon | EEF2KMT | 16 | - | SENP6 | 6 | + |
| exon-intron | L2HGDH | 14 | - | SOS2 | 14 | - |
| exon-intron | LRRC8D | | + | LOC101928035 | | + |
| exon-exon | SOD1 | 21 | + | TAGLN2 | 1 | - |
| intron-exon | Z94721.3 | 6 | - | LOC105378120 | 6 | - |
| exon-intron | CRACR2B | | - | PNPLA2 | 11 | - |
| exon-exon | SOS2 | 14 | + | RPL11 | 1 | + |
| exon-intron | LOC105373175 | | - | AC108879.1 | | - |
| intron-exon | AC093523.1 | | - | LOC105379014 | 5 | - |
| intron-exon | ZNF804A | 2 | + | HSPD1 | 2 | - |
| exon-intron | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-exon | SRPRB | 3 | + | TMSB4XP8 | 4 | - |
| exon-exon | PRSS12 | 4 | + | PRSS12 | 4 | - |
| exon-exon | SUCLG1 | 2 | + | SUCLG1 | 2 | - |
| exon-exon | EMC7 | 15 | + | EMC7 | 15 | - |
| intron-exon | TTL | 2 | - | C2orf69 | | + |
| exon-exon | HNRNPDL | 4 | + | HNRNPDL | 4 | - |
| exon-exon | PSMD5 | 9 | + | PSMD5 | 9 | - |
| exon-exon | SUN1 | 7 | - | KRT5 | 12 | - |
| exon-exon | ARL6IP5 | 3 | - | ARL6IP5 | 3 | + |
| exon-intron | ARPC5L | | - | MTND1P23 | 1 | + |
| intron-exon | LOC105375660 | 8 | + | ZBTB16 | 11 | + |
| intron-exon | GON7 | 14 | + | CRIM1 | 2 | - |
| exon-intron | TNFSF10 | 3 | + | TMEM150C | | - |
| exon-exon | TMEM97 | 17 | + | IFT20 | 17 | - |
| intron-exon | SNIP1 | 1 | - | FTH1P7 | 13 | - |
| intron-exon | ZBED5 | 11 | + | ZBED5 | 11 | - |
| exon-exon | BAG3 | 10 | - | BAG3 | 10 | + |
| exon-exon | ZNFX1 | 20 | + | ZNFX1 | 20 | - |
| exon-exon | STAT1 | 2 | + | STAT1 | 2 | - |
| exon-exon | UQCC2 | 6 | + | UQCC2 | 6 | - |
| exon-exon | ELP1 | 9 | + | ELP1 | 9 | - |
| exon-exon | PDK2 | 17 | - | PDK2 | 17 | + |
| exon-exon | HMGB1 | 13 | + | ND1 | MT | + |
| exon-exon | SNX3 | 6 | + | SNX3 | 6 | - |
| intron-exon | LOC105372602 | 20 | - | FIP1L1 | 4 | + |
| intron-exon | RPL23AP82 | | + | MICU2 | 13 | + |
| intron-exon | PARD3 | 10 | + | SET | 9 | + |
| exon-exon | HPS3 | 3 | + | CP | 3 | - |
| exon-exon | HSP90B1 | 12 | - | APP | 21 | - |
| exon-exon | HLA-DRB5 | 6 | + | HLA-DRB5 | 6 | - |
| exon-exon | MTPN | 7 | + | MTPN | 7 | - |
| exon-exon | VCL | 10 | - | VCL | 10 | + |
| intron-exon | LOC101929798 | | - | LOC100996740 | | + |
| exon-exon | PTTG1IP | 21 | + | PTTG1IP | 21 | - |
| intron-exon | CACNG2 | | - | TES | 7 | + |
| intron-exon | RPS23P8 | X | - | RPS23 | 5 | - |
| exon-exon | EED | 11 | - | COX3 | MT | + |
| exon-exon | HSPA9 | 5 | + | HSPA9 | 5 | - |
| exon-exon | MRS2 | 6 | - | MRS2 | | + |
| exon-exon | MORN2 | | - | MIER1 | 1 | + |
| intron-exon | YES1 | 18 | + | PHACTR2 | 6 | - |
| exon-exon | SLC25A29 | 14 | - | YY1 | 14 | + |
| exon-exon | IRX3 | 16 | + | IRX3 | 16 | - |
| exon-exon | SRXN1 | 20 | + | SRXN1 | 20 | - |
| exon-exon | RPL30 | 8 | + | RPL30 | 8 | - |
| exon-intron | HERC2 | 15 | - | HERC2P10 | | - |
| exon-exon | PSMC4 | 19 | - | PSMC4 | 19 | + |
| exon-exon | SRSF11 | 1 | - | SRSF11 | 1 | + |
| exon-intron | NOP56 | 20 | - | AL591506.1 | | - |
| exon-exon | VPS13B | 8 | - | GDPD1 | 17 | + |
| exon-exon | RPL34 | 4 | - | RPL34P33 | | + |
| intron-exon | APBB2 | 4 | - | SFXN3 | 10 | + |
| exon-exon | CHMP2B | 3 | - | CHMP2B | 3 | + |
| intron-exon | RASA2 | 3 | + | YWHAQ | 2 | - |
| exon-exon | CSPP1 | 8 | - | ARFGEF1 | 8 | - |
| exon-exon | PIAS3 | 1 | + | C12orf45 | 12 | + |
| exon-exon | MPHOSPH10 | 2 | - | MPHOSPH10 | 2 | + |
| intron-exon | STEAP2-AS1 | 7 | - | STEAP1 | 7 | + |
| exon-intron | PPP3R1 | 2 | + | MTATP6P1 | 1 | + |
| exon-exon | RPL13AP25 | 13 | + | RPL13AP25 | 13 | - |
| exon-exon | KIRREL1 | 1 | - | KIRREL1 | 1 | + |
| exon-exon | CDK12 | 17 | - | CDK12 | 17 | + |
| exon-exon | PAFAH1B1 | 17 | - | PAFAH1B1 | 17 | + |
| intron-exon | LOC105371084 | 16 | + | GSPT1 | 16 | - |
| exon-exon | SEC62 | 3 | - | SEC62 | 3 | + |
| exon-exon | LOC105371622 | 1 | - | RABGAP1L | 1 | - |
| intron-exon | EIF3FP3 | 2 | - | EIF3F | 11 | + |
| exon-intron | C4orf3 | 4 | + | RPS10-NUDT3 | 6 | - |
| exon-exon | LUC7L3 | 17 | - | ND3 | MT | + |
| exon-exon | RPL26P19 | 5 | + | RPL26 | 17 | - |
| intron-exon | NF1 | 17 | + | FAM160B1 | 10 | + |
| intron-exon | LOC105370795 | 15 | + | TMEM87A | 15 | - |
| intron-exon | MGC4859 | 7 | - | HSPA8 | 11 | - |
| intron-exon | SVIL | 10 | - | CKS1BP3 | 5 | - |
| intron-exon | LOC101926913 | 2 | - | SNHG14 | 15 | - |
| exon-exon | TUBA1C | 12 | - | TUBA1B | 12 | - |
| exon-exon | TACC1 | 8 | - | TACC1 | 8 | + |
| intron-exon | C5orf66 | 5 | + | CDC5L | 6 | - |
| exon-exon | MICOS10 | 1 | - | COL1A1 | 17 | + |
| exon-exon | COL1A1 | 17 | + | RNA45SN1 | 21 | - |
| exon-exon | PDZD7 | 10 | - | LZTS2 | 10 | - |
| exon-exon | ND1 | MT | - | CREBBP | 16 | + |
| exon-exon | EPHA1 | 7 | - | ZYX | 7 | + |
| exon-exon | CYTB | MT | - | HTATSF1 | X | - |
| exon-exon | CD74 | 5 | + | CD74 | 5 | - |
| intron-exon | SLC25A34-AS1 | 1 | - | SLC25A34 | 1 | - |
| exon-exon | ZC3H14 | 14 | - | ZC3H14 | 14 | + |
| exon-intron | LOC107986762 | 7 | - | MYO9A | 15 | - |
| exon-exon | LYAR | 4 | + | COL6A3 | 2 | + |
| intron-exon | TMEM269-DT | 1 | - | C1orf50 | 1 | - |
| exon-exon | TBC1D20 | 20 | + | RAB29 | 1 | + |
| exon-exon | RNF121 | 11 | - | CTDSP2 | 12 | - |
| exon-exon | ACTR1B | 2 | + | RDX | 11 | + |
| exon-exon | GRN | 17 | - | DEK | 6 | + |
| intron-exon | STK32A | 5 | + | DPYSL3 | 5 | - |
| exon-intron | RAB7A | 3 | - | SLC9B1 | 4 | - |
| exon-exon | BGN | X | - | NCL | 2 | + |
| exon-exon | RPLP1P4 | 2 | + | RNA45SN1 | 21 | - |
| exon-intron | COL1A1 | 17 | + | RNA18SP5 | 21 | - |
| exon-exon | MAU2 | 19 | - | MAU2 | 19 | + |
| exon-exon | TMEM265 | 16 | - | SRCAP | 16 | - |
| intron-exon | TIAM1 | 21 | + | SYNDIG1L | 14 | + |
| exon-intron | LDLRAD2 | 1 | + | RNA18SP5 | 21 | - |
| exon-intron | HBA2 | 16 | - | ABCG1 | 21 | - |
| exon-exon | VPS28 | 8 | + | RNA45SN3 | 21 | - |
| exon-exon | ND2 | MT | - | EPB41L2 | 6 | - |
| exon-exon | CD74 | 5 | + | CD74 | 5 | - |
| exon-exon | LOC101929251 | 2 | + | LOC107985792 | 2 | + |
| intron-exon | LOC105376392 | 10 | - | ATP5F1C | 10 | + |
| exon-exon | CHTOP | 1 | - | CHTOP | 1 | + |
| intron-exon | FABP3 | 1 | - | ZCCHC17 | 1 | + |
| exon-exon | TMEM214 | 2 | - | TMEM214 | 2 | + |
| exon-exon | ACTR2 | 2 | - | ACTR2 | 2 | + |
| exon-intron | ANAPC1 | 2 | + | LOC102724642 | 2 | + |
| exon-exon | GNPDA1 | 5 | + | GNPDA1 | 5 | - |
| exon-exon | CRTAP | 3 | - | NBEAL1 | 2 | + |
| exon-intron | MAPKBP1 | 15 | - | LTK | 15 | - |
| exon-exon | KHSRP | 19 | + | KHSRP | 19 | - |
| exon-intron | LOC105370062 | 12 | - | AC079949.3 | 12 | - |
| intron-exon | RP11-427M20.1 | 4 | + | PABPC4L | 4 | + |
| exon-exon | ATP8 | MT | - | SKI | 1 | + |
| exon-exon | ACTN1 | 14 | + | ACTN1 | 14 | - |
| exon-exon | IVNS1ABP | 1 | + | IVNS1ABP | 1 | - |
| intron-exon | AL589182.1 | 14 | + | BPNT1 | 1 | + |
| exon-exon | RTN4 | 2 | + | UTP3 | 4 | + |
| exon-exon | RPS16 | 19 | + | CCND1 | 11 | - |
| intron-exon | SYN1 | X | - | GM2A | 5 | - |
| intron-exon | LOC102724050 | 12 | + | TGOLN2 | 2 | + |
| exon-exon | DCTN1 | 2 | + | DCTN1 | 2 | - |
| exon-exon | SERPINB1 | 6 | + | ERRFI1 | 1 | + |
| exon-exon | CRTAP | 3 | - | CRTAP | 3 | + |
| exon-exon | SF3A1 | 22 | + | PEA15 | 1 | - |
| intron-exon | DDX27 | 20 | + | B4GALT5 | 20 | + |
| exon-intron | ND1 | MT | - | MDC1-AS1 | 6 | + |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| intron-exon | JARID2 | 6 | - | RAD52 | 12 | + |
| exon-exon | PRPF19 | 11 | + | PRPF19 | 11 | - |
| exon-exon | ND2 | MT | - | TALAM1 | 11 | - |
| intron-exon | LOC105375931 | 8 | - | HAS2 | 8 | + |
| exon-exon | TCERG1 | 5 | - | TCERG1 | 5 | + |
| exon-exon | PEBP1 | 12 | - | PEBP1 | 12 | + |
| exon-exon | MAPKAPK5 | 12 | - | MAPKAPK5 | 12 | + |
| intron-exon | LPCAT3 | 12 | - | ZNF280D | 15 | - |
| intron-exon | CCDC7 | 10 | + | ITGB1 | 10 | + |
| exon-exon | ERH | 14 | + | RPL13P12 | 17 | + |
| intron-exon | TTC7B | 14 | - | NT5E | 6 | - |
| exon-intron | GAPVD1 | 9 | - | KCTD21 | 11 | - |
| exon-intron | ACTBP11 | 1 | + | LOC102723769 | 22 | + |
| intron-exon | AC023157.2 | 12 | + | LOC105369724 | 12 | + |
| intron-exon | CR381670.1 | 21 | + | TEKT4P2 | 21 | + |
| exon-exon | GLRX3 | 10 | - | LYRM2 | 6 | + |
| exon-exon | SSBP3 | 1 | + | SLC27A4 | 9 | - |
| exon-exon | ACTN4 | 19 | - | ETV5 | 3 | + |
| exon-exon | HIRIP3 | 16 | + | FADS2 | 11 | - |
| exon-exon | LHPP | 10 | - | RNA45SN3 | 21 | - |
| exon-exon | YIPF3 | 6 | + | NIBAN1 | 1 | + |
| exon-exon | LSM4 | 19 | + | LSM4 | 19 | - |
| exon-exon | FKBP9 | 7 | - | TPM4 | 19 | - |
| exon-exon | COL1A1 | 17 | + | ADAMTS2 | 5 | + |
| exon-exon | ETNK2 | 1 | + | MMP14 | 14 | - |
| exon-exon | RPLP1P4 | 2 | + | IL13RA1 | X | + |
| exon-intron | ZNF224 | 19 | + | ZNF225 | 19 | + |
| exon-exon | C1RL | 12 | + | EVI5 | 1 | + |
| exon-intron | CHMP4B | 20 | - | FBXO34 | 14 | + |
| exon-exon | P3H4 | 17 | + | MOAP1 | 14 | + |
| exon-exon | MXRA8 | 1 | + | RNF126 | 19 | - |
| exon-exon | RPLP1P4 | 2 | + | DMD | X | + |
| exon-exon | MSX1 | 4 | - | MSX1 | 4 | + |
| exon-exon | RNF24 | 20 | + | ERGIC1 | 5 | - |
| exon-exon | BRI3 | 7 | - | COL3A1 | 2 | - |
| exon-exon | ENG | 9 | + | CLIP2 | 7 | - |
| exon-exon | PAQR3 | 4 | - | COX1 | MT | - |
| exon-exon | LMAN1 | 18 | + | KLF6 | 10 | + |
| exon-exon | CADM1 | 11 | + | COL1A2 | 7 | - |
| intron-exon | SHC4 | 15 | - | STAG3L1 | 7 | - |
| exon-exon | YWHAB | 20 | - | SLC29A3 | 10 | - |
| exon-exon | PSAP | 10 | + | RNA45SN1 | 21 | - |
| intron-exon | NEGR1 | 1 | + | ADD1 | 4 | - |
| intron-exon | MIR497HG | 17 | - | STK10 | 5 | + |
| exon-exon | LOC105379414 | Y | - | LOC105373105 | X | - |
| exon-exon | HSP90AA1 | 14 | + | CALD1 | 7 | - |
| exon-exon | NFIX | 19 | - | LYL1 | 19 | - |
| exon-exon | COL1A1 | 17 | + | SUMO3 | 21 | + |
| exon-exon | SRRM2 | 16 | - | ND2 | MT | - |
| exon-intron | JUND | 19 | + | USP2-AS1 | 11 | + |
| intron-exon | POLDIP3 | 22 | - | KLHDC4 | 16 | + |
| intron-exon | LOC112268276 | 1 | + | ATP1A1 | 1 | - |
| exon-exon | RBM26 | 13 | + | SRSF3 | 6 | - |
| exon-exon | ND4 | MT | - | CLSPN | 1 | + |
| intron-exon | SIPA1L1 | 14 | + | AKAP12 | 6 | - |
| exon-exon | LRRC58 | 3 | + | KIAA0513 | 16 | - |
| exon-exon | RPL14 | 3 | - | S100A16 | 1 | + |
| exon-exon | CD99L2 | X | + | BRD4 | 19 | + |
| intron-exon | PPIAP22 | 21 | - | AMFR | 16 | + |
| exon-exon | SHANK1 | 19 | + | SAR1A | 10 | + |
| exon-intron | TUBGCP3 | 13 | + | LOC105370364 | 13 | - |
| intron-exon | SIAH3 | 13 | - | AXL | 19 | - |
| exon-exon | SNRPF | 12 | - | ND4 | MT | + |
| exon-exon | SNHG29 | 17 | - | ZNF160 | 19 | + |
| intron-exon | UFC1 | 1 | + | ADAMTS4 | 1 | + |
| exon-exon | LMNA | 1 | - | SELENON | 1 | - |
| exon-intron | TMX1 | 14 | - | MTND1P23 | 1 | + |
| exon-exon | TRAPPC1 | 17 | + | QARS1 | 3 | + |
| intron-exon | FAM172A | 5 | + | MME | 3 | - |
| exon-intron | CTDP1 | 18 | - | ZFP30 | 19 | - |
| intron-exon | ABCC3 | 17 | - | BBX | 3 | - |
| exon-exon | FAM168B | 2 | + | NDST1 | 5 | - |
| exon-exon | EXOSC6 | 16 | + | LDLR | 19 | - |
| exon-exon | LOC105372401 | 19 | - | OTUD7B | 1 | + |
| exon-exon | MRC2 | 17 | - | RNF20 | 9 | - |
| exon-exon | SNU13 | 22 | + | HNRNPD | 4 | + |
| exon-intron | CDK2AP2 | 11 | + | HOOK2 | 19 | + |
| intron-exon | ATP6V0A4 | 7 | + | KHDC4 | 1 | + |
| exon-exon | RRM2 | 2 | - | WDR82 | 3 | + |
| intron-exon | CLDN14 | 21 | - | LOC105369301 | 21 | - |
| exon-exon | NIFK-AS1 | 2 | + | PCNA | 20 | + |
| exon-exon | LOC107985403 | 20 | - | TM9SF4 | 20 | - |
| exon-exon | ZNF503 | 10 | + | ZNF503 | 10 | - |
| exon-exon | AAMDC | 11 | - | GPNMB | 7 | - |
| exon-intron | MOAP1 | 14 | + | MAP3K20-AS1 | 2 | - |
| exon-exon | BOLA2-SMG1P6 | 16 | + | HNRNPA3P6 | 3 | - |
| exon-exon | CDK4 | 12 | - | JHY | 11 | - |
| exon-intron | RPL37A | 2 | - | CHPT1 | 12 | + |
| exon-exon | CD164 | 6 | - | PNRC1 | 6 | + |
| exon-intron | HNRNPA3P6 | 3 | + | LOC100130691 | 2 | + |
| intron-exon | HSD17B11 | 4 | - | HSD17B13 | 4 | - |
| intron-exon | LOC102724084 | 16 | - | UIMC1 | 5 | - |
| exon-exon | RNA45SN2 | 21 | + | CGGBP1 | 3 | - |
| intron-exon | MAP4K3-DT | 2 | - | RPL10P16 | 19 | - |
| intron-exon | RNU6-6P | 10 | + | YBX1 | 1 | + |
| exon-exon | IRF3 | 19 | - | RB1CC1 | 8 | - |
| intron-exon | RRP7BP | 22 | + | CA1 | 8 | - |
| exon-exon | GMCL1 | 2 | + | PAFAH1B2 | 11 | + |
| exon-exon | DDIT3 | 12 | - | ATF2 | 2 | - |
| exon-exon | LOC102724528 | 1 | - | DNM3 | 1 | - |
| exon-exon | TEC | 4 | - | EIF1B | 3 | + |
| exon-exon | ZNF461 | 19 | - | LRRC28 | 15 | + |
| exon-intron | RAB30-DT | 11 | + | COX5BP4 | 11 | + |
| exon-exon | GPATCH1 | 19 | + | TFPI | 2 | - |
| exon-intron | ARL4A | 7 | + | AC011287.1 | 7 | + |
| exon-exon | IQCK | 16 | - | IQCK | 16 | + |
| exon-exon | ATRAID | 2 | - | ATRAID | 2 | + |
| exon-exon | PDK3 | X | - | PDK3 | X | + |
| exon-exon | ATP6 | MT | - | KRT24 | | - |
| exon-exon | SLC24A5 | 15 | + | MYEF2 | 15 | - |
| exon-intron | TALAM1 | 11 | - | TRNL1 | | + |
| exon-exon | MAU2 | 19 | - | MAU2 | 19 | + |
| exon-exon | IL6ST | 5 | + | ND2 | MT | + |
| exon-exon | ND4 | MT | - | GPR180 | | - |
| exon-exon | HUWE1 | X | + | HUWE1 | X | - |
| exon-exon | NUCB2 | 11 | - | NUCB2 | 11 | + |
| exon-exon | SOD1 | 21 | - | SOD1 | 21 | + |
| exon-exon | LYN | 8 | - | LYN | 8 | + |
| exon-exon | DNAJC15 | 13 | - | MAX | 14 | - |
| exon-intron | MLLT10 | 10 | - | CACNA2D3 | 3 | + |
| exon-exon | ND2 | MT | - | NUCB2 | 11 | + |
| exon-exon | IL4R | 16 | - | ND1 | MT | + |
| exon-exon | UBR5 | 8 | + | ATP6 | MT | + |
| exon-exon | ND4 | MT | - | ND4 | MT | + |
| intron-exon | MTND1P23 | 1 | - | CDC26P1 | | - |
| exon-exon | VAV3 | 1 | + | VAV3 | 1 | - |
| exon-exon | RPL27 | 17 | - | C1orf210 | 1 | - |
| exon-exon | ALDH1A1 | 9 | + | ALDH1A1 | 9 | - |
| exon-exon | RELCH | 18 | - | RELCH | 18 | + |
| exon-intron | ND1 | MT | + | PRDX2 | 19 | - |
| exon-exon | RWDD1 | 6 | - | RWDD1 | 6 | + |
| exon-exon | COX6C | 8 | + | PCYT1A | 3 | - |
| exon-exon | OFD1 | X | - | OFD1 | X | + |
| intron-exon | DTL | 1 | + | RPL21P16 | 10 | - |
| exon-exon | ZNF562 | 19 | - | ZNF562 | 19 | + |
| exon-exon | TNFSF10 | 3 | + | TNFSF10 | 3 | - |
| exon-exon | ND3 | MT | - | PNISR | 6 | - |
| exon-exon | NCKAP1 | 2 | + | NCKAP1 | 2 | - |
| exon-exon | FAM193A | 4 | - | FAM193A | 4 | + |
| exon-exon | GGNBP2 | 17 | - | GGNBP2 | 17 | + |
| intron-exon | GNB1L | | - | RPL7A | 9 | + |
| exon-exon | PSMC4 | 19 | - | PSMC4 | 19 | + |
| exon-exon | SF3B1 | 2 | + | SF3B1 | 2 | - |
| exon-exon | SAT1 | X | - | SAT1 | X | + |
| exon-exon | CDS1 | 4 | - | CDS1 | 4 | + |
| exon-exon | PLAC8 | | + | PLAC8 | | - |
| exon-exon | ND1 | MT | - | SMN2 | 5 | + |
| exon-exon | MKNK2 | 19 | + | MKNK2 | 19 | - |
| exon-exon | TALAM1 | 11 | - | MALAT1 | 11 | + |
| exon-exon | ATP6 | MT | - | RPL22 | 1 | - |
| exon-exon | PGK1 | X | - | PGK1 | X | + |
| exon-exon | POMGNT2 | | + | TP53 | 17 | - |
| exon-exon | EIF5B | 2 | - | EIF5B | 2 | + |
| exon-intron | TNK1 | 17 | + | ZNF765-ZNF761 | 19 | + |
| intron-exon | LOC101927751 | 15 | - | ALDH1A3 | 15 | + |
| exon-exon | MAGED1 | X | - | MAGED1 | X | + |
| intron-exon | GOLGA3 | 12 | - | HNRNPC | 14 | - |
| exon-exon | TMEM59 | 1 | + | TMEM59 | 1 | - |
| exon-exon | PCNA | 20 | + | PCNA | 20 | - |
| exon-exon | PTCD3 | | - | PTCD3 | | + |
| exon-exon | BBX | 3 | - | BBX | 3 | + |
| exon-exon | SIX1 | 14 | + | SIX1 | 14 | - |
| exon-exon | IMPDH2 | 3 | + | IMPDH2 | 3 | - |
| exon-exon | IMMT | 2 | + | IMMT | 2 | - |
| exon-exon | RHCE | 1 | - | TMEM50A | 1 | + |
| exon-exon | ACTG1 | 17 | + | ACTG1 | 17 | - |
| exon-exon | H3P6 | 2 | + | ND6 | MT | + |
| intron-exon | REV1 | 2 | - | REV1 | 2 | + |
| exon-exon | ND2 | MT | - | IER5 | | + |
| exon-exon | RESF1 | 12 | - | RESF1 | 12 | + |
| exon-exon | HSP90AA1 | 14 | + | HSP90AA1 | 14 | - |
| exon-exon | LOC105379173 | 5 | - | CDC42SE2 | 5 | + |
| exon-exon | NKIRAS1 | 3 | - | UBE2E1 | 3 | + |
| exon-exon | ND4 | MT | - | H3-3B | 17 | - |
| exon-exon | CTBP2 | 10 | + | CTBP2 | 10 | - |
| exon-exon | TRAPPC3 | 1 | + | TRAPPC3 | 1 | - |
| exon-intron | C3orf62 | | + | BLOC1S6 | 15 | - |
| exon-exon | IRX3 | 16 | + | TP53INP1 | 8 | - |
| exon-exon | KIF24 | 9 | - | UBAP1 | 9 | - |
| exon-exon | CCDC34 | 11 | + | CCDC34 | 11 | - |
| exon-exon | LIMCH1 | 4 | - | LIMCH1 | 4 | + |
| exon-exon | RAB13 | 1 | + | ND3 | MT | + |
| exon-intron | LOC100134868 | 20 | - | FAM182B | 20 | - |
| exon-exon | RAD23B | 9 | - | CCL28 | 5 | - |
| exon-exon | TMEM199 | 17 | - | TMEM199 | 17 | + |
| exon-exon | ATP12A | 13 | - | ATP12A | 13 | + |
| exon-exon | SKP1 | 5 | + | SKP1 | 5 | - |
| exon-exon | WDR48 | 3 | - | WDR48 | 3 | + |
| exon-exon | HSP90AA1 | 14 | + | IRF9 | 14 | + |
| exon-exon | ATIC | 2 | - | ATIC | 2 | + |
| exon-intron | YWHAB | 20 | + | DZIP1 | 13 | + |
| exon-exon | SIX1 | 14 | + | SIX1 | 14 | - |
| exon-intron | LRRC61 | 7 | - | PTPN13 | 4 | + |
| intron-exon | DACH1 | 13 | - | H3P6 | 2 | + |
| exon-exon | PTMAP10 | | + | ENO1 | 1 | - |
| exon-exon | CYP2F2P | | + | CYP2F1 | | + |
| intron-exon | STT3A-AS1 | 11 | - | EI24 | 11 | + |
| exon-exon | TIMM17B | X | + | SPINT1 | 15 | - |
| intron-exon | LOC100505549 | 18 | + | ATP8B1 | 18 | - |
| exon-exon | TALAM1 | 11 | - | UBFD1 | 16 | + |
| exon-exon | TMEM59 | 1 | + | TMEM59 | 1 | - |
| exon-exon | SRGAP3 | 3 | + | ND1 | MT | + |
| intron-exon | MTND1P23 | 1 | - | DHX36 | | - |
| exon-exon | ACTA2-AS1 | 10 | + | ACTA2 | 10 | - |
| exon-exon | RBM3 | X | - | F3 | 1 | + |
| exon-exon | CYB5R1 | 1 | + | CYB5R1 | 1 | - |
| exon-exon | CEACAM6 | 19 | - | CEACAM6 | 19 | + |
| exon-exon | ZNF791 | 19 | - | TALAM1 | 11 | - |
| exon-exon | GUK1 | 1 | - | RP9 | 7 | - |
| exon-exon | ADPGK | 15 | + | ADPGK | 15 | - |
| exon-exon | MAPK9 | 5 | + | MAPK9 | 5 | - |
| exon-intron | CTSB | 8 | + | CHN2 | 7 | + |
| exon-exon | ND4 | MT | - | YY1AP1 | 1 | - |
| exon-exon | DDR1 | 6 | - | TERF2IP | 16 | - |
| exon-exon | NOMO2 | 16 | + | NOMO1 | 16 | + |
| exon-exon | SRSF7 | 2 | + | SRSF7 | 2 | - |
| exon-exon | CBX1 | 17 | + | CBX1 | 17 | - |
| exon-exon | APLP2 | 11 | - | APLP2 | 11 | + |
| exon-exon | MRPS7 | 17 | - | MRPS7 | 17 | + |
| exon-exon | DOCK6 | 19 | + | DOCK6 | 19 | - |
| exon-exon | ZDHHC18 | 1 | - | FAM83A | 8 | - |
| exon-intron | ND3 | MT | - | SND1 | 7 | + |
| exon-exon | HLA-DRB5 | 6 | + | HLA-DRB5 | 6 | - |
| intron-exon | MTND1P23 | 1 | - | SLC25A5 | X | + |
| exon-exon | GPBP1 | 5 | - | GPBP1 | 5 | + |
| exon-exon | GOLGA4 | 3 | - | ATP6 | MT | + |
| intron-exon | LOC101929294 | 8 | - | ADAM28 | 8 | + |
| exon-exon | AFG3L1P | 16 | - | ANAPC13 | 3 | - |
| exon-exon | SOX4 | 6 | - | SOX4 | 6 | + |
| exon-exon | ANP32B | 9 | - | ND2 | MT | + |
| exon-exon | SLC40A1 | 2 | + | DHX32 | 10 | - |
| exon-exon | KTN1 | 14 | - | KTN1 | 14 | + |
| exon-exon | PCMTD1 | 8 | + | PCMTD1 | 8 | - |
| intron-exon | LOC102723765 | 11 | - | RAB27A | 15 | - |
| exon-exon | SEC11C | 18 | - | SEC11C | 18 | + |
| exon-exon | CHRNB2 | 1 | + | ADAR | 1 | - |
| exon-exon | GLYATL2 | 11 | + | GLYATL2 | 11 | - |
| intron-exon | IFT46 | 11 | + | DNAL1 | | + |
| exon-exon | HEXA | 15 | + | HEXA | 15 | - |
| intron-exon | CASK | X | + | ZFP36L1 | 14 | + |
| exon-exon | COL8A1 | 3 | - | F2R | 5 | - |
| exon-exon | TP53INP2 | 20 | - | TP53INP2 | 20 | + |
| exon-intron | RPL3P4 | 14 | + | IFNGR1 | 6 | + |
| exon-intron | PDPN | 1 | - | VEZT | 12 | - |
| exon-exon | GYG1 | 3 | - | GYG1 | 3 | + |
| exon-exon | CYP4B1 | 1 | - | CYP4B1 | 1 | + |
| exon-exon | ND1 | MT | - | SPG11 | 15 | - |
| exon-exon | UBR5 | 8 | + | UBR5 | 8 | - |
| exon-exon | PTTG1IP | 21 | + | PTTG1IP | 21 | - |
| exon-exon | CACUL1 | 10 | + | PYGO2 | 1 | - |
| exon-exon | RBM41 | | + | ND1 | MT | + |
| exon-exon | PLEKHA5 | 12 | - | PLEKHA5 | 12 | + |
| exon-exon | H3P6 | 2 | - | H3-3A | 1 | + |
| exon-exon | COX3 | MT | - | COX3 | MT | + |
| exon-exon | AKR1C1 | 10 | - | AKR1C3 | 10 | + |
| intron-exon | LYRM4-AS1 | 6 | + | LYRM4 | 6 | - |
| exon-exon | ATP6 | MT | - | PAFAH1B2 | 11 | - |
| exon-intron | DDOST | 1 | + | OSBPL10 | | + |
| intron-exon | MROH2B | | - | C7 | 5 | - |
| exon-exon | WDR5B | | - | FAM162A | 3 | - |
| exon-exon | MALAT1 | 11 | - | MALAT1 | 11 | + |
| intron-exon | STT3A-AS1 | 11 | - | EI24 | 11 | + |
| intron-exon | BID | 22 | + | NOP58 | 2 | + |
| exon-exon | SLC25A5 | X | - | SLC25A5 | X | + |
| exon-exon | PSME3 | 17 | - | PSME3 | 17 | + |
| exon-exon | SRSF11 | 1 | - | SRSF11 | 1 | + |
| exon-exon | CDC23 | 5 | + | CDC23 | 5 | - |
| exon-exon | CKAP4 | 12 | + | CIBAR2 | | + |
| exon-exon | FAM120A | 9 | - | FAM120A | 9 | + |
| exon-exon | ARID1B | 6 | - | ND4 | MT | + |
| exon-exon | KMT2C | 7 | + | KMT2C | 7 | - |
| exon-exon | CHL1 | 3 | - | CHL1 | 3 | + |
| exon-exon | S100A8 | 1 | + | S100A8 | 1 | - |
| intron-exon | MATR3 | 5 | + | PEX2 | 8 | - |
| exon-exon | USP11 | X | - | USP11 | X | + |
| exon-exon | GLRX3 | 10 | - | GLRX3 | 10 | + |
| intron-exon | AC098614.3 | 3 | - | TPM4 | 19 | + |
| exon-exon | NDUFA1 | X | - | NDUFA1 | X | + |
| exon-exon | TCTEX1D2 | 3 | + | TCTEX1D2 | 3 | - |
| exon-exon | JUN | 1 | + | ND6 | MT | + |
| exon-exon | ACTR1B | 2 | + | HLA-B | 6 | - |
| exon-exon | NR3C1 | 5 | + | NR3C1 | 5 | - |
| intron-exon | TTC6 | 14 | - | S100A11 | 1 | - |
| exon-exon | IFT52 | 20 | - | IFT52 | 20 | + |
| exon-exon | NBEA | | - | ND5 | MT | + |
| exon-exon | ND3 | MT | - | SRSF2 | 17 | - |
| exon-exon | TRIM16 | 17 | + | TRIM13 | 13 | + |
| intron-exon | LOC105377272 | | - | LOC105377272 | | + |
| intron-exon | IRAK2 | | - | EMC3 | 3 | - |
| exon-exon | RAC1 | 7 | - | RAC1P2 | 4 | - |
| exon-exon | GALNT14 | 2 | + | GALNT14 | 2 | - |
| exon-exon | SF3A3 | 1 | + | PIGR | 1 | + |
| exon-exon | RAB5IF | 20 | - | RAB5IF | 20 | + |
| exon-exon | RPL6P27 | 18 | + | RPL6P13 | | + |
| intron-exon | DNAJC9-AS1 | 10 | + | MRPS16 | 10 | - |
| intron-exon | COX1 | MT | - | COX1 | MT | + |
| exon-exon | TTC3 | 21 | - | TTC3 | 21 | + |
| exon-exon | NABP1 | 2 | - | NABP1 | 2 | + |
| intron-exon | GAK | 4 | - | ATP6V0A2 | 12 | + |
| intron-exon | TRAF3IP2-AS1 | 6 | + | TRAF3IP2 | 6 | - |
| exon-exon | BASP1 | 5 | - | BASP1 | 5 | + |
| exon-exon | KPNA4 | 3 | + | KPNA4 | 3 | - |
| exon-exon | ND6 | MT | - | HNRNPU | 1 | - |
| intron-exon | KIAA0825 | 5 | - | ND5 | MT | + |
| exon-exon | RPS20P10 | 2 | + | RPS20 | 8 | - |
| intron-exon | FAM153CP | 5 | - | RPL19 | 17 | + |
| exon-intron | GNL3L | X | - | WNK3 | | - |
| exon-exon | MALAT1 | 11 | - | MALAT1 | 11 | + |
| exon-exon | ND2 | MT | - | SYNCRIP | 6 | - |
| exon-intron | ND2 | MT | - | AL353748.3 | | - |
| exon-exon | VAPA | 18 | - | ND1 | MT | + |
| exon-exon | TSPYL4 | | + | TSPYL4 | | - |
| exon-exon | ALS2 | 2 | + | ALS2 | 2 | - |
| exon-exon | RPL26P16 | | + | RPL26 | 17 | - |
| exon-exon | RAB11FIP1 | 8 | + | RAB11FIP1 | 8 | - |
| exon-exon | HNRNPA0 | 5 | + | HNRNPA0 | 5 | - |
| intron-exon | LRRC57 | 15 | - | SNAP23 | 15 | + |
| exon-exon | ATP6 | MT | - | GTF2I | 7 | + |
| exon-exon | EEF1A1P6 | 7 | + | RNF20 | 9 | - |
| exon-exon | IL17RA | 22 | - | IL17RA | 22 | + |
| intron-exon | SMOC1 | 14 | + | CDH1 | 16 | - |
| exon-exon | PTPN1 | 20 | - | ERF | 19 | + |
| exon-intron | LY6G5B | 6 | - | QSOX1 | 1 | - |
| intron-exon | TSPAN9 | 12 | + | MYH10 | 17 | + |
| exon-exon | SLCO4A1 | 20 | - | ZNF691 | 1 | - |
| exon-exon | NCDN | 1 | - | PDGFRA | 4 | + |
| exon-exon | ND2 | MT | - | VOPP1 | 7 | + |
| intron-exon | RNR2 | MT | - | LUM | 12 | - |
| exon-intron | SUMO2 | 17 | - | ELMO1 | 7 | + |
| intron-exon | TTC23L | 5 | + | RAD1 | 5 | + |
| exon-exon | GHITM | 10 | - | CCNL1 | 3 | + |
| exon-exon | ND1 | MT | - | MALAT1 | 11 | + |
| exon-exon | FKBP8 | 19 | + | MEGF8 | 19 | - |
| intron-exon | STX16-NPEPL1 | 20 | - | KDM7A-DT | | - |
| exon-intron | ALDH3A1 | 17 | + | ASPH | 8 | - |
| intron-exon | LOC105378642 | 1 | - | GJB5 | | + |
| exon-exon | UBE2D2 | 5 | - | UBE2D2 | 5 | + |
| exon-exon | IMMT | 2 | + | IMMT | 2 | - |
| exon-exon | H2BC5 | 6 | - | H2BC5 | 6 | + |
| exon-exon | DNAJC2 | 7 | - | PMPCB | 7 | + |
| exon-exon | RPL27 | 17 | - | RPL27 | 17 | + |
| intron-exon | LOC643634 | | - | SLC4A11 | | - |
| exon-exon | ADAM9 | 8 | - | ADAM9 | 8 | + |
| exon-exon | SART3 | 12 | + | GTF3A | 13 | + |
| exon-intron | RBM41 | | + | RPS4Y1 | Y | - |
| exon-exon | LINC02345 | 15 | - | TMCO5A | 15 | - |
| exon-exon | MPHOSPH10 | 2 | - | MPHOSPH10 | 2 | + |
| exon-exon | LINC00472 | | + | LINC00472 | | - |
| exon-exon | ND3 | MT | - | MDN1 | 6 | - |
| exon-intron | IRF2BP2 | 1 | + | IGL | 22 | + |
| exon-exon | C9orf24 | 9 | + | CTNNA1 | 5 | + |
| exon-exon | ZMYND8 | 20 | + | ZC3H13 | 13 | + |
| exon-exon | CHI3L1 | 1 | + | UPF3A | 13 | + |
| exon-exon | PPHLN1 | 12 | - | PPHLN1 | 12 | + |
| exon-exon | CC2D1A | 19 | - | MED10 | 5 | - |
| exon-exon | MBTD1 | | + | MBTD1 | 17 | - |
| exon-exon | AHR | 7 | - | AHR | 7 | + |
| exon-exon | RPL14P1 | 12 | - | RPL14 | 3 | + |
| exon-intron | CASKIN1 | 16 | - | LOC105374898 | | + |
| exon-exon | ATP6 | MT | - | MALAT1 | 11 | + |
| exon-intron | ZSCAN2 | 15 | - | CLSTN1 | 1 | + |
| intron-exon | TEX22 | 14 | - | PLEKHG2 | 19 | - |
| exon-intron | CCDC71 | 3 | + | LOC107985664 | X | + |
| intron-exon | DPY19L2P2 | | - | DST | 6 | - |
| exon-exon | UBL5 | 19 | - | KLHL26 | | + |
| intron-exon | LOC101928323 | 3 | - | NKTR | 3 | + |
| exon-intron | RELA | 11 | + | RNA18SP5 | 21 | - |
| exon-exon | HINT1 | 5 | + | PSMB3 | 17 | - |
| exon-exon | ND2 | MT | - | GGA3 | 17 | + |
| exon-intron | HMG20A | 15 | - | RBM39 | 20 | + |
| exon-exon | ATG5 | 6 | + | ATG5 | 6 | - |
| exon-exon | GPI | 19 | - | GPI | 19 | + |
| exon-exon | CYP1B1 | 2 | + | CYP1B1 | 2 | - |
| exon-exon | UFSP2 | 4 | - | ANKRD37 | 4 | + |
| exon-intron | TIMM10B | 11 | - | EHBP1L1 | 11 | - |
| exon-exon | MKNK2 | 19 | + | LMNB2 | 19 | + |
| exon-exon | THUMPD2 | 2 | + | THUMPD2 | 2 | - |
| exon-exon | METTL23 | 17 | - | METTL23 | 17 | + |
| exon-exon | DTWD1 | | - | DTWD1 | 15 | + |
| exon-exon | PRNP | 20 | - | PRNP | 20 | + |
| exon-exon | ASAH1 | 8 | + | ASAH1 | 8 | - |
| exon-exon | PTMA | 2 | - | ND4 | MT | + |
| exon-exon | LOC112268144 | 15 | + | INO80 | 15 | - |
| exon-exon | BMS1 | 10 | - | DUS4L-BCAP29 | 7 | + |
| intron-exon | ANKH | 5 | + | FOS | 14 | - |
| exon-exon | BRD4 | 19 | + | EVL | 14 | - |
| exon-exon | SEC24C | 10 | - | COX1 | MT | - |
| exon-intron | ND2 | MT | - | LOC102724050 | 12 | + |
| exon-intron | ND5 | MT | - | ANKS1A | 6 | - |
| intron-exon | LOC107986986 | 8 | + | ND5 | MT | - |
| intron-exon | AC092620.2 | | - | SPOPL | | - |
| exon-exon | IGLON5 | 19 | + | ZNF503 | 10 | - |
| exon-exon | TBL1X | X | - | RNA45SN2 | 21 | - |
| exon-exon | ATP2B3 | X | - | PSMD1 | 2 | + |
| exon-intron | RASL12 | 15 | + | FKBP5 | 6 | - |
| exon-exon | NFIC | 19 | - | DDX23 | 12 | + |
| exon-exon | ND2 | MT | - | ATXN2L | 16 | - |
| intron-exon | FHAD1-AS1 | 1 | - | COL8A2 | 1 | + |
| exon-intron | DHX9 | 1 | - | PWP1 | 12 | - |
| intron-exon | TBC1D21 | | + | LOXL1-AS1 | | + |
| exon-exon | GATD1 | 11 | + | ATF4 | 22 | + |
| exon-exon | CRYBB2 | 22 | - | FAH | 15 | - |
| exon-exon | PGAM5 | 12 | - | IDS | X | + |
| intron-exon | ALG14 | 1 | - | LOC729970 | | - |
| exon-intron | HSPB1 | 7 | - | PTRH1 | 9 | - |
| intron-exon | MIR124-1 | | + | MIR124-1HG | | + |
| exon-exon | KDM4B | 19 | - | GTF2F1 | 19 | - |
| exon-exon | THOC3 | 5 | + | THOC3 | 5 | - |
| exon-exon | KCTD5 | 16 | - | SPTBN2 | 11 | + |
| exon-exon | PITPNA | 17 | + | CDR1 | X | - |
| exon-exon | ATP6 | MT | - | SMYD1 | | - |
| exon-intron | LOC105377697 | | + | LOC105377698 | | + |
| exon-intron | IVD | 15 | - | FARS2 | 6 | + |
| exon-exon | TMEM37 | 2 | - | RNA45SN3 | 21 | - |
| intron-exon | HEXA | 15 | - | LOC105370887 | | - |
| exon-intron | POLR1A | 2 | + | ORC3 | | - |
| exon-intron | PPEF2 | | + | ATP11A | 13 | - |
| intron-exon | COX6A1P2 | 6 | - | EEF1A1 | 6 | + |
| exon-intron | SLC25A11 | 17 | + | ATAD5 | | + |
| exon-intron | RRAGD | | + | LOC101927437 | | - |
| exon-intron | HBA2 | 16 | - | AC026786.1 | 12 | - |
| intron-exon | DEF8 | 16 | + | CRYBB2P1 | 22 | - |
| exon-intron | HDHD3 | | + | THBS4 | 5 | + |
| exon-exon | SHISA8 | 22 | - | SREBF2 | 22 | - |
| exon-intron | LCN2 | 9 | - | MRTFB | 16 | - |
| exon-intron | LINC00672 | 17 | + | COL14A1 | 8 | + |
| intron-exon | CSNK1A1P1 | | - | CCND1 | 11 | - |
| exon-intron | SLC30A6 | 2 | - | EGFLAM | 5 | - |
| exon-intron | RPL10P16 | 19 | + | C3orf38 | 3 | - |
| exon-intron | RBFOX2 | 22 | + | MDC1-AS1 | 6 | + |
| intron-exon | AL122014.1 | | - | LOC101928338 | 11 | - |
| intron-exon | EPS15L1 | 19 | - | TYW5 | | - |
| exon-intron | TBCD | 17 | - | C2orf88 | | - |
| exon-exon | FOXP2 | 7 | - | GTF2A1 | 14 | + |
| exon-exon | METTL2B | 7 | + | MRPL42 | 12 | - |
| exon-exon | IGF2BP2 | | + | IGF2BP2 | 3 | - |
| intron-exon | KIAA1614-AS1 | 1 | - | KIAA1614 | 1 | + |
| intron-exon | AC139426.3 | | + | DTL | 1 | - |
| exon-intron | LOC724084 | 1 | + | FYN | 6 | + |
| exon-intron | LIN7C | 11 | + | RAB31 | 18 | - |
| exon-exon | GLYCTK | 3 | - | PSG3 | 19 | + |
| exon-intron | FXR2 | 17 | - | MPDU1 | 17 | - |
| exon-intron | LRP10 | 14 | - | F13A1 | 6 | + |
| exon-intron | MTG2 | 20 | - | SF3B2 | 11 | - |
| exon-exon | LOC107984256 | 10 | + | RPL4 | 15 | + |
| exon-exon | FBLN1 | 22 | - | PTPN12 | 7 | - |
| exon-exon | MZT2B | 2 | - | IGFBP3 | 7 | + |
| exon-intron | SIGMAR1 | 9 | + | VGLL3 | 3 | + |
| intron-exon | GOLPH3 | 5 | + | RAB11FIP1 | 8 | + |
| exon-exon | IMPACT | 18 | - | DPY19L4 | 8 | - |
| exon-intron | CGB8 | 19 | + | RNF216P1 | 7 | - |
| exon-exon | HLA-DPB1 | 6 | - | NOS3 | 7 | - |
| exon-exon | SPINDOC | 11 | - | SPINDOC | 11 | + |
| exon-intron | RNF166 | 16 | + | HRH1 | 3 | - |
| exon-intron | DCAF11 | 14 | + | RP11-468E2.6 | | + |
| exon-exon | TPSAB1 | | - | TPSB2 | | - |
| exon-intron | INS-IGF2 | 11 | + | HSP90B1 | 12 | + |
| exon-exon | RNA45SN2 | 21 | + | NR1D1 | 17 | - |
| exon-exon | GNAS | 20 | + | CHMP2A | 19 | - |
| exon-intron | RPS9 | 19 | + | LOC105371256 | | + |
| exon-intron | DDRGK1 | 20 | - | RPL21P39 | 3 | - |
| exon-exon | TMSB4XP8 | 4 | - | CAPN2 | 1 | + |
| intron-exon | LOC105369780 | 12 | + | RPS26P8 | 17 | + |
| exon-exon | EIF3G | 19 | - | TSEN54 | 17 | + |
| exon-exon | MYO19 | 17 | + | UTP4 | 16 | + |
| exon-exon | QARS1 | 3 | - | AP2A1 | 19 | + |
| exon-exon | ZER1 | 9 | - | ATP1A1 | 1 | + |
| exon-intron | RPL28 | 19 | + | SPIRE1 | 18 | - |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-intron | STAG3L2 | 7 | - | POM121C | 7 | + |
| intron-exon | NUDCD3 | 7 | - | TAF1C | 16 | - |
| exon-exon | ATAD3A | 1 | + | RUVBL1 | 3 | - |
| exon-intron | SLC19A1 | 21 | - | CALM3 | 19 | + |
| exon-exon | ZNF850 | 19 | - | CMBL | 5 | - |
| exon-exon | TOB2 | 22 | - | ACO2 | 22 | + |
| exon-exon | SLC38A10 | 17 | - | RPS4X | X | - |
| exon-intron | RPL13 | 16 | + | ABCA3 | 16 | + |
| exon-intron | NAA50 | 3 | - | NCAM1 | 11 | + |
| intron-exon | FYTTD1 | 3 | + | INTS6 | 13 | - |
| exon-exon | LINC01811 | 3 | + | LOC102724048 | 3 | + |
| intron-exon | SERF2-C15ORF63 | 15 | + | PAWR | 12 | - |
| intron-exon | Z84488.2 | 6 | + | CALHM6 | 6 | + |
| intron-exon | AL356489.4 | 9 | + | LINC01251 | 9 | + |
| intron-exon | LOC105369321 | 11 | + | LINC00301 | 11 | + |
| exon-exon | LOC440311 | 15 | + | LOC105370991 | | + |
| intron-exon | WDR89 | 14 | + | LOC105370532 | 14 | + |
| intron-exon | ANKRD37 | 4 | - | LRP2BP | 4 | - |
| exon-intron | TRAPPC10 | 21 | + | PPP6R2 | 22 | - |
| intron-exon | ANKRD37 | 4 | - | LRP2BP | 4 | - |
| exon-intron | PRM2 | 16 | - | LOC105371082 | 16 | - |
| intron-exon | PPP2R3C | 14 | + | PRORP | 14 | + |
| exon-intron | LOC105371009 | 15 | - | AC024651.1 | | - |
| intron-exon | COMMD1 | 2 | + | MALAT1 | 11 | + |
| exon-exon | LOC730234 | 7 | + | CSDE1 | 1 | - |
| intron-exon | LOC105374211 | | + | TUBB2A | 6 | - |
| intron-exon | LOC107987075 | 9 | - | FAM27E3 | 9 | - |
| exon-intron | RPL13P12 | 17 | - | CR589904.1 | | + |
| exon-exon | TBL1XR1 | 3 | - | RGS17 | 6 | - |
| exon-intron | RPS18P5 | 3 | - | PCNP | 3 | - |
| exon-exon | KRT8 | 12 | + | COMT | 22 | + |
| exon-intron | LLGL2 | 17 | + | C19orf38 | | - |
| exon-intron | RPSAP26 | 2 | - | COMMD1 | 2 | - |
| exon-exon | MAP3K2 | 2 | - | RPL22 | 1 | - |
| exon-exon | LGALS1 | 22 | - | MAGED1 | X | + |
| exon-exon | GSTM2 | 1 | + | RAN | 12 | + |
| exon-intron | ATP1A1 | 1 | + | ZFP64 | 20 | - |
| exon-exon | RBM25 | 14 | - | SART1 | 11 | + |
| exon-exon | KRT8 | 12 | - | KRT6A | 12 | - |
| exon-exon | MIR200CHG | | + | EMG1 | 12 | + |
| exon-exon | HSP90AA1 | 14 | - | PTMA | 2 | + |
| exon-exon | RPS24 | 10 | - | EDF1 | 9 | - |
| intron-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-intron | RAB15 | | - | CHURC1-FNTB | 14 | - |
| exon-exon | ANP32A | 15 | - | LEO1 | 15 | - |
| exon-exon | SMN1 | 5 | + | APOC1 | 19 | + |
| exon-intron | NUCKS1 | 1 | - | BCO1 | | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| exon-intron | H2BC12 | 6 | - | TNRC6A | 16 | - |
| exon-intron | ZCCHC7 | | + | EP300 | 22 | - |
| exon-exon | ELK3 | 12 | + | UBXN4 | 2 | + |
| exon-exon | SEC61A2 | 10 | - | SEC61A2 | 10 | + |
| exon-exon | LPXN | 11 | + | ZFP91-CNTF | 11 | + |
| exon-exon | LAMTOR4 | 7 | + | EID1 | 15 | + |
| intron-exon | PRPF40B | 12 | + | RPS27A | 2 | + |
| intron-exon | SNORD141A | 9 | + | EEF1A1P5 | 9 | + |
| exon-intron | ZFPM2-AS1 | 8 | - | OXR1 | 8 | - |
| intron-exon | YTHDF3 | | + | FLT1 | | - |
| exon-exon | INS-IGF2 | 11 | - | USP9X | X | + |
| intron-exon | FTX | X | - | PAPPA | 9 | + |
| intron-exon | FAM156A | | - | TTC7A | 2 | + |
| intron-exon | CPT1A | 11 | - | MAP3K8 | 10 | + |
| exon-exon | ATG14 | 14 | - | NTAN1 | 16 | - |
| exon-exon | RPL10P16 | 19 | - | PODXL | 7 | - |
| exon-exon | SPCS1 | 3 | + | RPL4 | 15 | - |
| exon-intron | ABCC4 | 13 | - | PCDH1 | 5 | - |
| intron-exon | CCDC200 | 17 | - | SBNO1 | 12 | - |
| exon-exon | IGLC2 | 22 | + | IGLC3 | 22 | + |
| exon-exon | CMAS | | + | CAT | 11 | + |
| exon-intron | RAB23 | 6 | - | LOC105370034 | 12 | + |
| exon-exon | ZNF260 | 19 | - | NFIA | 1 | + |
| exon-exon | TES | 7 | + | POLB | | + |
| intron-exon | SERF2-C15ORF63 | 15 | + | DYNLT1 | 6 | - |
| exon-intron | GTF2H5 | | + | STX18-AS1 | 4 | - |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-exon | SNRPD1 | 18 | + | RPS13 | 11 | - |
| exon-exon | HNRNPA2B1 | 7 | - | PTMAP4 | 12 | - |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-exon | EFCAB11 | 14 | - | LOC105370616 | | - |
| exon-exon | CALU | 7 | + | CSTB | 21 | - |
| exon-exon | FAM219B | 15 | - | ACTB | 7 | - |
| exon-intron | BCYRN1P1 | | + | LOC105374836 | 2 | + |
| exon-exon | APOBEC3C | 22 | + | APOBEC3F | | + |
| exon-intron | RPL23A | 17 | + | RPL13P12 | 17 | - |
| intron-exon | AOPEP | 9 | - | TUBA1C | 12 | + |
| intron-exon | AC008771.1 | 5 | - | ZFYVE16 | 5 | - |
| exon-exon | HLA-A | 6 | + | HLA-J | | + |
| exon-exon | PAPOLA | 14 | + | AK7 | 14 | + |
| intron-exon | RACGAP1 | | - | LOC102723963 | | - |
| exon-intron | LINC01252 | | - | AC007450.1 | | - |
| exon-exon | COL12A1 | 6 | - | TAGLN | 11 | + |
| exon-exon | TMBIM6 | 12 | + | SLC35A4 | 5 | + |
| exon-exon | NDUFB5 | 3 | + | DGKA | 12 | + |
| exon-exon | PCSK1 | 5 | - | TADA3 | 3 | - |
| intron-exon | INHBA | 7 | + | LOC107986789 | | + |
| exon-intron | CELA3B | 1 | + | CELA3A | 1 | + |
| exon-exon | TNS2 | 12 | + | TPT1 | 13 | - |
| exon-exon | EIF2B1 | | - | DDX55 | 12 | - |
| exon-exon | MYL6 | 12 | - | MYL6B | 12 | - |
| exon-exon | KIF1A | 2 | + | RNA45SN3 | 21 | - |
| exon-exon | YY1AP1 | 1 | + | TOMM7 | 7 | - |
| exon-intron | SMURF2P1-LRRC37BP1 | 17 | + | FBXO27 | 19 | - |
| intron-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-intron | HROB | | + | POM121C | 7 | + |
| exon-intron | TMSB4X | X | + | CCSER1 | 4 | - |
| exon-exon | TPI1 | 12 | + | TOP2B | 3 | - |
| exon-intron | ATP5PB | | + | SERF2-C15ORF63 | 15 | + |
| exon-intron | TMEM14B | 6 | + | MAK | 6 | + |
| exon-exon | RPL37A | 2 | + | MYL6 | 12 | + |
| exon-exon | PIR-FIGF | X | - | AMOTL1 | 11 | + |
| exon-intron | RPS17P16 | 22 | + | RP3-468K18.5 | 6 | - |
| exon-exon | EIF3C | 16 | + | UTP4 | 16 | + |
| exon-exon | UBE2N | 12 | - | IRF2BPL | | - |
| exon-exon | FKBP3 | 14 | - | COX5A | 15 | - |
| exon-intron | NBEAL1 | 2 | + | RAP1GAP2 | 17 | - |
| exon-exon | TUBA1A | 12 | - | TUBA1B | 12 | - |
| exon-exon | B4GALT5 | 20 | - | HSP90AA1 | 14 | - |
| exon-exon | PRKRA | 2 | - | FAH | 15 | + |
| intron-exon | CHCHD3 | 7 | - | REEP5 | 5 | - |
| exon-exon | PKD1P1 | 16 | + | NPIPA7 | 16 | + |
| exon-exon | HLA-C | 6 | - | GRINA | 8 | + |
| exon-exon | RNA45SN2 | 21 | - | CALM3 | 19 | + |
| exon-exon | PLCG2 | 16 | + | TNFRSF12A | 16 | + |
| exon-exon | LOC100129492 | | - | USP8 | 15 | + |
| intron-exon | LOC105371574 | 17 | - | DDB2 | 11 | + |
| exon-exon | RPS11P5 | 12 | + | KBTBD2 | 7 | - |
| exon-exon | ERH | 14 | - | FBXW11 | 5 | - |
| exon-exon | UQCRQ | 5 | + | LEAP2 | | + |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-intron | SLMO2-ATP5E | 20 | - | RAP1GAP2 | 17 | - |
| intron-exon | LOC441914 | | + | RPL7AP19 | | + |
| exon-intron | RBX1 | 22 | + | GRIN2B | | + |
| exon-intron | GSK3B | 3 | - | AC012291.3 | | - |
| exon-exon | SNRPD2 | 19 | - | SON | 21 | + |
| exon-exon | HM13 | 20 | + | PNPLA2 | 11 | + |
| exon-exon | BCYRN1P1 | | + | TMSB10 | 2 | + |
| exon-exon | TRAPPC12 | 2 | + | RPS18 | 6 | - |
| exon-intron | CMIP | 16 | + | LINC02558 | 22 | + |
| exon-intron | HMGN3 | 6 | - | PTPRD | 9 | + |
| exon-exon | COX11 | 17 | - | MSX2 | 5 | + |
| exon-intron | NDUFS4 | 5 | + | ZNF735 | 7 | - |
| exon-intron | LOC105377949 | 6 | + | LOC107986634 | 6 | + |
| intron-exon | LINC02509 | 4 | + | LOC105373358 | 2 | - |
| exon-intron | C21orf91-OT1 | 21 | - | LOC105372741 | 21 | - |
| intron-exon | AL512658.1 | 6 | - | LOC105378073 | 6 | - |
| exon-exon | HOXB2 | 17 | + | HOXB-AS1 | 17 | + |
| exon-intron | LOC105375075 | 6 | + | AL136140.2 | 6 | + |
| intron-exon | AL157834.2 | 10 | - | LOC107984257 | 10 | - |
| intron-exon | SUCLA2 | 13 | - | LINC00444 | 13 | - |
| exon-exon | LINC01203 | X | + | LOC105373137 | X | + |
| exon-intron | LRRC37A10P | 17 | - | LOC107985086 | 17 | - |
| exon-intron | RORB | 9 | + | CLASP2 | 3 | + |
| intron-exon | WDPCP | 2 | - | NBEAL1 | 2 | - |
| intron-exon | NPTN | 15 | + | LOC105370891 | 15 | + |
| exon-exon | EPHA7 | 6 | + | LOC105377899 | 6 | + |
| exon-intron | LOC102724080 | 9 | + | AL158828.1 | 9 | + |
| exon-intron | SOX11 | 2 | + | AC108025.2 | 2 | + |
| exon-intron | LOC102723324 | 9 | + | GGTA1P | 9 | + |
| intron-exon | LOC105377469 | 4 | - | LINC01095 | 4 | - |
| exon-exon | RNA45SN1 | 21 | + | DIPK1B | 9 | + |
| exon-intron | LINC00856 | 10 | + | LOC105378379 | 10 | + |
| intron-exon | AC078993.1 | X | - | GRPR | X | - |
| intron-exon | LOC105370397 | 14 | + | SPR | 2 | + |
| intron-exon | MRPL33 | 2 | + | PLPBP | 8 | + |
| intron-exon | AC012593.1 | 2 | - | LOC105374461 | 2 | - |
| exon-exon | CNKSR3 | 6 | + | CNKSR3 | 6 | - |
| intron-exon | DNAAF2 | 14 | - | WWOX-AS1 | 16 | - |
| exon-exon | LINC02815 | 1 | - | LINC02814 | 1 | - |
| exon-intron | LOC105370542 | 14 | - | GPHN | 14 | - |
| exon-intron | CXCL14 | 5 | + | CSAD | 12 | + |
| exon-exon | THRAP3 | 1 | + | TBC1D2B | 15 | - |
| exon-exon | LINC00997 | 7 | + | LRAT | 4 | + |
| intron-exon | AGBL1 | 15 | - | LINC01584 | 15 | - |
| exon-exon | LOC645937 | 9 | + | CDK20 | 9 | + |
| exon-exon | LOC107986412 | 5 | - | LOC107986413 | 5 | - |
| intron-exon | MCEE | 2 | - | NUP155 | 5 | - |
| exon-exon | RNA45SN1 | 21 | + | DOC2B | 17 | - |
| intron-exon | FOXP1 | 3 | + | ARHGEF7 | 13 | + |
| exon-exon | LOC101928046 | 14 | + | SYNJ2BP-COX16 | 14 | + |
| exon-exon | EEF1A1P8 | 3 | - | LOC101929057 | 6 | + |
| exon-intron | NEAT1 | 11 | + | SF1 | 11 | - |
| intron-exon | ATG7 | 3 | + | SKAP2 | 7 | - |
| exon-intron | LOC105373785 | 2 | - | LINC01473 | 2 | - |
| intron-exon | COPG2 | 7 | + | NPEPL1 | 20 | + |
| intron-exon | LINC01949 | 5 | + | LOC101929380 | 5 | + |
| exon-intron | FEM1B | 15 | - | AC107871.2 | 15 | - |
| exon-intron | PALLD-AS1 | 4 | - | PALLD | 4 | - |
| exon-intron | ADSS2 | 1 | - | C1orf100 | 1 | - |
| exon-intron | HSCB | 22 | + | AL049697.1 | 6 | + |
| exon-intron | LOC102723672 | 7 | - | AC093627.5 | 7 | - |
| exon-intron | HNRNPA3 | 2 | + | AKAP10 | 17 | - |
| exon-intron | LOC100128268 | X | - | AL008633.1 | X | - |
| intron-exon | MMEL1 | 1 | + | MMEL1-AS1 | 1 | + |
| intron-exon | POLR2F | 22 | + | KIFBP | 10 | + |
| intron-exon | WDR25 | 14 | + | SP110 | 2 | - |
| intron-exon | AC078889.1 | 12 | - | IRAK3 | 12 | - |
| exon-exon | ERICH3-AS1 | 1 | + | LINC00867 | 10 | + |
| exon-intron | PMS2P4 | 7 | - | TYW1 | 7 | - |
| intron-exon | TRIP12 | 2 | - | KTN1-AS1 | 14 | - |
| exon-intron | LOC100506990 | 8 | + | LOC729732 | 8 | + |
| intron-exon | SH3PXD2A | 10 | - | TSHZ3 | 19 | - |
| exon-exon | CASZ1 | 1 | + | CASZ1 | 1 | - |
| exon-exon | RNA45SN1 | 21 | + | ZNF382 | 19 | + |
| intron-exon | TGFBR3 | 1 | - | BCL2L2-PABPN1 | 14 | + |
| exon-exon | LOC107987000 | 9 | + | LOC101930026 | 9 | + |
| intron-exon | ZNF282 | 7 | + | ALDH7A1 | 5 | - |
| exon-exon | NCOA1 | 2 | + | NOVA1 | 14 | - |
| exon-intron | LOC105375875 | 8 | - | AC011124.1 | 8 | - |
| exon-intron | USP40 | 2 | + | ARMC8 | 3 | - |
| exon-intron | CPSF6 | 12 | + | LOC102723704 | 4 | - |
| exon-intron | RNASEH2B | 13 | + | GUCY1B2 | 13 | + |
| intron-exon | SIAH1 | 16 | - | RPL7L1 | 6 | + |
| intron-exon | CHURC1-FNTB | 14 | + | LINC01521 | 22 | + |
| exon-intron | RNA45SN2 | 21 | + | ABCB7 | X | - |
| intron-exon | BCO1 | 16 | + | AAK1 | 2 | - |
| intron-exon | TPTE2 | 13 | - | ST8SIA4 | 5 | - |
| exon-intron | LOC105377488 | 4 | + | AC097375.1 | 4 | + |
| exon-exon | CCT6A | 7 | - | ITCH | 20 | - |
| exon-intron | GRID2 | 4 | - | AC112695.1 | 4 | - |
| intron-exon | BRPF3 | 6 | - | LOC102723648 | 6 | - |
| exon-exon | TEK | 9 | + | RPL38 | 17 | + |
| exon-intron | RPL37A-DT | 2 | - | SMARCAL1 | 2 | - |
| intron-exon | CALB1 | 8 | - | DRAXIN | 1 | + |
| intron-exon | LINC00643 | 14 | - | SYT16 | 14 | - |
| intron-exon | CPS1 | 2 | + | IFNGR1 | 6 | - |
| intron-exon | AC011754.1 | 2 | + | LOC107985902 | 2 | + |
| exon-exon | DVL2 | 17 | - | MRM3 | 17 | + |
| exon-intron | PLEKHA6 | 1 | + | PIK3C2B | 1 | + |
| exon-intron | PSMD13 | 11 | + | FAM157B | 9 | - |
| exon-intron | KLK12 | 19 | + | AC011473.1 | 19 | + |
| exon-exon | RNA45SN3 | 21 | + | CHRD | 3 | + |
| intron-exon | AC025917.1 | 15 | + | FAM214A | 15 | + |
| intron-exon | AL161908.1 | 9 | + | LOC105376277 | 9 | + |
| exon-exon | RPS15P8 | 15 | - | LOC105370772 | 15 | - |
| intron-exon | AC026992.1 | 15 | + | PAQR5 | 15 | + |
| intron-exon | POLR2J2 | 7 | - | ZNF529-AS1 | 19 | + |
| intron-exon | COX6B1 | 19 | + | DOCK10 | 2 | - |
| exon-exon | LOC105369690 | 12 | - | CMAS | 12 | + |
| intron-exon | LOC105377632 | 2 | + | LOC105374697 | 2 | + |
| exon-intron | LOC101927664 | 6 | - | AL365214.3 | 6 | - |
| intron-exon | LOC102724058 | 2 | + | MUSK | 9 | + |
| intron-exon | AL450322.2 | 10 | + | LOC105376363 | 10 | + |
| intron-exon | LOC105372347 | 19 | - | LOC105372348 | 19 | - |
| exon-exon | CNTN3 | 3 | + | LOC105377166 | 3 | + |
| exon-intron | LOC112268286 | 1 | - | RP5-936J12.1 | 1 | - |
| exon-intron | NRBP1 | 2 | + | MEF2A | 15 | + |
| exon-intron | CKMT2-AS1 | 5 | - | RASGRF2 | 5 | - |
| exon-intron | GALM | 2 | + | SNX14 | 6 | + |
| exon-exon | RAP2C | X | + | RAP2C-AS1 | X | + |
| exon-intron | GTF3C3 | 2 | - | ZNF852 | 3 | - |
| exon-exon | LARP1B | 4 | + | BTG3 | 21 | - |
| exon-intron | ARIH2 | 3 | + | PHF7 | 3 | + |
| exon-intron | B3GAT3 | 11 | - | SLC8A3 | 14 | - |
| exon-intron | PIGO | 9 | + | AL353795.2 | 9 | + |
| intron-exon | MNT | 17 | - | SPRED1 | 15 | + |
| exon-intron | TARDBP | 1 | + | BTD | 3 | + |
| intron-exon | WASF2 | 1 | - | PCYOX1 | 2 | + |
| exon-intron | PDK1 | 2 | + | RAPGEF4-AS1 | 2 | + |
| exon-intron | SPAG16-DT | 2 | - | AC079610.2 | 2 | - |
| exon-intron | TUFT1 | 1 | + | POGZ | 1 | + |
| intron-exon | LINC02381 | 12 | + | CCDC149 | 4 | - |
| intron-exon | VN1R16P | 1 | + | LOC100131465 | 1 | + |
| exon-intron | LOC102724684 | 9 | - | GALNT12 | 9 | - |
| exon-exon | RPS15P4 | 2 | + | LOC105371985 | 18 | + |
| intron-exon | HBD | 11 | - | HBBP1 | 11 | - |
| exon-exon | TRG-AS1 | 7 | + | AMPH | 7 | + |
| exon-intron | ZNF341 | 20 | - | AL050349.1 | 20 | - |
| intron-exon | LOC105371460 | 1 | - | LINC01704 | 1 | - |
| exon-intron | LOC105371958 | 18 | - | AP005230.1 | 18 | - |
| intron-exon | LINC00534 | 8 | + | LOC102724670 | 8 | + |
| exon-exon | TEX261 | 2 | + | LOC105374796 | 2 | + |
| intron-exon | AL391422.2 | 6 | + | LOC105374893 | 6 | + |
| exon-intron | LOC105372686 | 20 | - | LOC114827864 | 20 | - |
| exon-intron | TTC21B | 2 | + | DOCK1 | 10 | - |
| exon-intron | LRP10 | 14 | + | PDXDC1 | 16 | - |
| exon-exon | KLK3 | 19 | + | KLK2 | 19 | + |
| exon-intron | CTB-30L5.1 | 7 | - | AC004917.1 | 7 | - |
| exon-intron | FUBP1 | 1 | - | PRSS23 | 11 | - |
| exon-exon | SUGT1P3 | 13 | - | TPTE2P5 | 13 | - |
| intron-exon | ENTPD4 | 8 | - | FOXI3 | 2 | - |
| intron-exon | TUBGCP3 | 13 | - | ZNF791 | 19 | + |
| exon-intron | LOC105370018 | 12 | + | AC087863.2 | 12 | + |
| exon-exon | RALGPS2 | 1 | + | SLC22A17 | 14 | - |
| exon-intron | PDIA3 | 15 | + | CACNA2D3 | 3 | - |
| exon-exon | LOC101927961 | 18 | - | LOC105372091 | 18 | - |
| exon-exon | CTSF | 11 | + | CTSF | 11 | - |
| exon-exon | FBN3 | 19 | + | FBN3 | 19 | - |
| exon-exon | AGBL2 | 11 | - | TSBP1 | 6 | - |
| exon-exon | ISG20L2 | 1 | + | GNG4 | 1 | + |
| exon-exon | LOC105369489 | 11 | - | LOC105369488 | 11 | - |
| exon-exon | LOC107987032 | 9 | + | LOC101927823 | 9 | + |
| exon-intron | LINC02641 | 10 | + | AL357127.1 | 10 | + |
| intron-exon | RABEP1 | 17 | + | EIF2AK1 | 7 | - |
| exon-intron | TCL6 | 14 | + | ATP23 | 12 | - |
| intron-exon | KCTD21-AS1 | 11 | + | KCTD21 | 11 | - |
| exon-exon | LOC101927226 | 11 | + | PATL1 | 11 | + |
| exon-intron | BRWD1-AS2 | 21 | + | BRWD1-AS1 | 21 | + |
| intron-exon | AP000926.2 | 11 | + | CLMP | 11 | + |
| exon-exon | LOC100130268 | 12 | + | CAPS2-AS1 | 12 | + |
| exon-intron | MYLIP | 6 | + | MALSU1 | 7 | + |
| exon-intron | C2orf69P2 | 16 | - | AC018558.2 | 16 | - |
| intron-exon | PRTFDC1 | 10 | - | IMPG2 | 3 | - |
| exon-intron | LOC107986178 | 4 | + | AC005699.1 | 4 | + |
| exon-exon | LOC112267914 | 10 | + | LOC728158 | 10 | + |
| intron-exon | SAA2 | 11 | - | SAA4 | 11 | - |
| intron-exon | AC003101.1 | 17 | + | MIR365B | 17 | + |
| exon-exon | LOC101928673 | 1 | - | TNFSF4 | 1 | - |
| intron-exon | RNF217 | 6 | - | RNF217-AS1 | 6 | - |
| intron-exon | MAD1L1 | 7 | - | TRIOBP | 22 | + |
| exon-intron | LOC105372640 | 20 | + | AL136102.1 | 20 | + |
| intron-exon | GATAD2B | 1 | + | LOC343052 | 1 | + |
| intron-exon | BORCS7-ASMT | 10 | + | CCL28 | 5 | - |
| intron-exon | LINC01016 | 6 | - | LOC105375027 | 6 | - |
| exon-intron | NBPF5P | 1 | + | SLC25A24P2 | 1 | + |
| exon-intron | RNA45SN1 | 21 | + | SHD | 19 | + |
| exon-exon | TSR2 | X | - | RPL11 | 1 | + |
| exon-intron | ZNF644 | 1 | - | AP003171.1 | 11 | + |
| exon-intron | UNKL | 16 | - | PCGF3 | 4 | - |
| exon-intron | LOC105375296 | 7 | + | AC099654.15 | 7 | + |
| intron-exon | NRXN3 | 14 | - | MFSD4B | 6 | + |
| intron-exon | AC007333.1 | 16 | + | LOC105371261 | 16 | + |
| intron-exon | BCL2L1 | 20 | + | BCL2L1-AS1 | 20 | + |
| intron-exon | BNC2 | 9 | - | ALG10B | 12 | + |
| exon-intron | RNA45SN3 | 21 | + | CELF5 | 19 | + |
| exon-exon | PPM1K | 4 | + | PFN3 | 5 | - |
| intron-exon | RRP7A | 22 | + | SERHL2 | 22 | + |
| intron-exon | KIAA1671 | 22 | + | COG8 | 16 | + |
| exon-exon | IGLV2-8 | 22 | + | IGLL5 | 22 | + |
| intron-exon | SFMBT1 | 3 | - | RPL34P34 | 19 | - |
| intron-exon | LOC107984814 | 16 | + | LOC101927978 | 16 | + |
| exon-intron | TMEM223 | 11 | - | TAF6L | 11 | - |
| exon-exon | FAM21EP | 10 | + | WASHC2A | 10 | + |
| exon-exon | RRN3P2 | 16 | + | LOC107984832 | 16 | + |
| intron-exon | UBA1 | X | + | FAT4 | 4 | + |
| exon-intron | DMD | X | + | TMEM165 | 4 | + |
| intron-exon | AC092745.5 | 12 | - | FAM86FP | 12 | - |
| exon-intron | LOC112268431 | 2 | - | AC010149.1 | 2 | - |
| exon-exon | TLR8 | X | + | AASS | 7 | - |
| exon-exon | RNA45SN1 | 21 | + | IRX2 | 5 | - |
| intron-exon | TRAV12-3 | 14 | + | TRAJ8 | 14 | + |
| intron-exon | RBP5 | 12 | + | CLSTN3 | 12 | + |
| exon-exon | CRIP3 | 6 | + | CRIP3 | 6 | - |
| intron-exon | RAB3GAP2 | 1 | + | MORF4L1P1 | 1 | + |
| exon-exon | LOC107985946 | 2 | + | UBXN4 | 2 | + |
| exon-exon | APOA1 | 11 | + | APOA1-AS | 11 | + |
| exon-exon | HSF4 | 16 | - | FBXL8 | 16 | - |
| exon-exon | EIF4B | 12 | + | LOC283335 | 12 | + |
| exon-exon | C22orf39 | 22 | + | LOC105372860 | 22 | + |
| exon-exon | MRPS18C | 4 | + | SIGLEC10 | 19 | - |
| exon-intron | CACNA2D4 | 12 | + | LOC105369602 | 12 | + |
| intron-exon | SLC26A5 | 7 | - | PSMC2 | 7 | - |
| intron-exon | PRR7-AS1 | 5 | - | GRK6 | 5 | - |
| intron-exon | LOC107985023 | 17 | - | TSEN54 | 17 | - |
| intron-exon | POLR2J4 | 7 | + | TLR10 | 4 | + |
| exon-exon | LOC112268090 | 12 | + | LINC00937 | 12 | + |
| exon-exon | LOC105375567 | 7 | - | TMEM176B | 7 | - |
| exon-exon | PHPT1 | 9 | - | AJM1 | 9 | - |
| exon-intron | RPLP0 | 12 | - | AC074183.2 | 7 | - |
| exon-exon | RUSC1-AS1 | 1 | - | FDPS | 1 | - |
| exon-exon | CATIP-AS1 | 2 | - | CATIP | 2 | - |
| intron-exon | CEACAMP5 | 19 | - | LIPE-AS1 | 19 | - |
| exon-exon | RRP7A | 22 | - | LOC101927372 | 22 | - |
| exon-exon | PSG1 | 19 | + | PSG5 | 19 | + |
| exon-exon | TK1 | 17 | + | LOC107985050 | 17 | + |
| exon-exon | EIF3J-DT | 15 | - | CTDSPL2 | 15 | - |
| exon-exon | WBP1 | 2 | - | INO80B | 2 | - |
| exon-intron | LOC105373637 | 2 | - | AC114763.1 | 2 | - |
| intron-exon | LOC112841600 | 2 | - | LINC01814 | 2 | - |
| exon-exon | FUZ | 19 | - | AP2A1 | 19 | - |
| exon-exon | PLTP | 20 | - | CTSA | 20 | - |
| intron-exon | GSEC | 11 | - | DCPS | 11 | - |
| exon-exon | LOC105371566 | 17 | - | DRG2 | 17 | - |
| exon-intron | PRXL2A | 10 | + | SH2D4B | 10 | + |
| exon-exon | LINC00674 | 17 | + | SRSF4 | 1 | - |
| exon-intron | TRAC | 14 | - | LOC112267867 | 14 | - |
| exon-intron | IGHG1 | 14 | - | IGH | 14 | - |
| intron-exon | LOC729732 | 8 | - | FAM85A | 8 | - |
| intron-exon | POM121L11P | 22 | - | BCR | 22 | - |
| exon-intron | LOC100996736 | 1 | + | LOC107985200 | 1 | + |
| intron-exon | LOC101928816 | 2 | - | SP100 | 2 | - |
| exon-intron | ELL | 19 | - | AC010335.1 | 19 | - |
| intron-exon | AL132996.1 | 6 | - | LOC105377891 | 6 | - |
| exon-exon | COA5 | 2 | + | MGAT4A | 2 | + |
| intron-exon | LOC105379154 | 5 | - | VAPB | 20 | - |
| intron-exon | PARGP1 | 10 | - | AGAP4 | 10 | - |
| exon-intron | MICALL1 | 22 | + | C22orf23 | 22 | + |
| exon-exon | KIF22 | 16 | - | LOC107984837 | 16 | - |
| exon-exon | CDK4 | 12 | - | TSPAN31 | 12 | - |
| intron-exon | Z94721.3 | 6 | - | RNASET2 | 6 | - |
| intron-exon | IGH | 14 | - | IGHV3-48 | 14 | - |
| exon-intron | POLI | 18 | - | AC093462.1 | 18 | - |
| exon-intron | SCNM1 | 1 | - | TNFAIP8L2-SCNM1 | 1 | - |
| exon-intron | FUZ | 19 | - | AP2A1 | 19 | - |
| intron-exon | TNC | 9 | - | DELEC1 | 9 | - |
| exon-intron | TMEM30A-DT | 6 | + | FILIP1 | 6 | + |
| exon-exon | PDAP1 | 7 | - | ARPC1B | 7 | - |
| intron-exon | AL713998.4 | 6 | + | LOC105377844 | 6 | + |
| exon-exon | LOC107986768 | 7 | - | LOC107986769 | 7 | - |
| intron-exon | MED15P8 | 2 | - | NF1P8 | 2 | - |
| exon-exon | SRM | 1 | + | PPAN-P2RY11 | 19 | - |
| exon-intron | LOC102723591 | X | - | ABCD1 | X | - |
| exon-intron | NUDT19 | 19 | - | AC008736.1 | 19 | - |
| exon-exon | AP3S1 | 5 | - | ATG12 | 5 | - |
| intron-exon | MED15P8 | 2 | - | NF1P8 | 2 | - |
| exon-exon | TFF1 | 21 | + | TMPRSS3 | 21 | + |
| intron-exon | UBASH3A | 21 | - | TMPRSS3 | 21 | - |
| intron-exon | AC007128.1 | 7 | - | LOC100505938 | 7 | - |
| exon-exon | ALOX5AP | 13 | + | LINC00398 | 13 | + |
| exon-exon | TRMT2A | 22 | + | RANBP1 | 22 | + |
| exon-intron | SERINC4 | 15 | - | SERF2-C15ORF63 | 15 | - |
| exon-exon | LMAN2 | 5 | - | MXD3 | 5 | - |
| exon-exon | C4orf48 | 4 | - | CHRNA3 | 15 | - |
| exon-exon | WDR77 | 1 | - | OVGP1 | 1 | - |
| exon-exon | GIMAP2 | 7 | + | GIMAP1-GIMAP5 | 7 | + |
| exon-intron | SLC13A4 | 7 | + | LOC105375521 | 7 | + |
| exon-exon | NDP | X | + | NDP-AS1 | X | + |
| exon-intron | LOC100134317 | 19 | - | AC092296.2 | 19 | - |
| exon-exon | PMP22 | 17 | + | PMP22 | 17 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHA2 | 14 | - |
| exon-intron | ZNF195 | 11 | - | AC123788.1 | 11 | - |
| exon-intron | PDX1 | 13 | - | PLUT | 13 | - |
| exon-exon | KIF22 | 16 | - | LOC107984837 | 16 | - |
| intron-exon | CSNK1D | 17 | - | SLC16A3 | 17 | - |
| exon-intron | LOC105377891 | 6 | + | AL132996.1 | 6 | + |
| exon-exon | SGO1 | 3 | - | CERK | 22 | - |
| exon-exon | PAOX | 10 | + | MTG1 | 10 | + |
| exon-intron | TMEM255B | 13 | + | GAS6-AS1 | 13 | + |
| intron-exon | IGH | 14 | - | IGHV3-7 | 14 | - |
| exon-intron | DYNC1H1 | 14 | + | LOC107985809 | 2 | - |
| exon-intron | PRKG1-AS1 | 10 | - | PRKG1 | 10 | - |
| exon-exon | PNMA5 | X | - | PPP1R18 | 6 | - |
| exon-exon | LOC101927708 | 11 | - | LOC105376526 | 11 | - |
| exon-intron | HES2 | 1 | - | SENP1 | 12 | + |
| exon-exon | ST14 | 11 | + | OTUD5 | X | - |
| intron-exon | LINC01389 | 1 | + | FOXD2 | 1 | + |
| exon-exon | PDAP1 | 7 | - | ARPC1B | 7 | - |
| exon-exon | DPEP1 | 16 | + | CHMP1A | 16 | + |
| exon-exon | LOC105377478 | 4 | + | LINC02507 | 4 | + |
| exon-exon | IGHG3 | 14 | - | IGHG1 | 14 | - |
| exon-exon | GBP3 | 1 | + | LOC105378841 | 1 | + |
| exon-exon | ST7-AS1 | 7 | + | ST7 | 7 | + |
| exon-exon | NAA10 | X | - | ARHGAP4 | X | - |
| exon-exon | IGHJ3 | 14 | - | IGHM | 14 | - |
| exon-exon | LSP1P5 | 1 | + | LOC100996737 | 1 | + |
| intron-exon | AC024563.1 | 19 | - | ZNF492 | 19 | - |
| intron-exon | ARMH3 | 10 | - | EXOSC2 | 9 | - |
| intron-exon | NR1I3 | 1 | - | TOMM40L | 1 | - |
| exon-exon | PGF | 14 | + | LOC107984690 | 14 | + |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| intron-exon | LOC111875821 | 10 | - | STN1 | 10 | - |
| intron-exon | LOC105370384 | 13 | - | CDC16 | 13 | - |
| exon-exon | EZR | 6 | - | SYTL3 | 6 | - |
| exon-exon | POLR3H | 22 | - | ACO2 | 22 | - |
| exon-intron | LOC107987097 | 9 | + | PGS1 | 17 | - |
| exon-intron | JKAMP | 14 | + | NUP214 | 9 | + |
| exon-exon | FIS1 | 7 | - | CLDN15 | 7 | - |
| exon-exon | HSD3B1 | 1 | - | HSD3BP2 | 1 | - |
| exon-intron | PSG3 | 19 | + | PSG8 | 19 | + |
| intron-exon | QPRT | 16 | - | SPN | 16 | - |
| exon-exon | TUBA4A | 2 | - | STK16 | 2 | - |
| intron-exon | NOCT | 4 | + | ELF2 | 4 | + |
| exon-intron | ELF2 | 4 | - | NOCT | 4 | - |
| exon-exon | TRBJ1-6 | 7 | + | TRBC1 | 7 | + |
| intron-exon | IGH | 14 | - | IGHG3 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | FAM120AOS | 9 | - | LOC107987097 | 9 | - |
| intron-exon | AC092153.1 | 2 | - | ITGB6 | 2 | - |
| exon-intron | HBG2 | 11 | + | LOC106099065 | 11 | + |
| exon-exon | LINC01786 | 1 | + | SCNN1D | 1 | + |
| exon-exon | LUZP1 | 1 | - | KDM1A | 1 | - |
| intron-exon | MAP7 | 6 | - | MOAP1 | 14 | + |
| exon-exon | NME1-NME2 | 17 | + | UTP18 | 17 | + |
| exon-exon | SEPTIN7 | 7 | + | SEPTIN7P3 | 7 | + |
| exon-exon | FCGR2A | 1 | + | FCGR2B | 1 | + |
| intron-exon | EVA1C | 21 | + | FCGRT | 19 | + |
| exon-exon | IGHJ3 | 14 | - | IGHG1 | 14 | - |
| exon-intron | ACTB | 7 | + | SYN2 | 3 | - |
| intron-exon | LOC105379243 | 8 | - | NEIL2 | 8 | - |
| exon-intron | CALR | 19 | - | WDR13 | X | + |
| intron-exon | IGH | 14 | - | IGHM | 14 | - |
| intron-exon | H2BC9 | 6 | + | LOC105374986 | 6 | + |
| exon-exon | TRAC | 14 | - | TRAJ11 | 14 | - |
| exon-exon | TRAJ38 | 14 | + | TRAC | 14 | + |
| intron-exon | CDH12 | 5 | + | HSPD1P1 | 5 | + |
| exon-exon | APOA1 | 11 | + | APOA1-AS | 11 | + |
| intron-exon | ALOX12-AS1 | 17 | - | FBXW4 | 10 | - |
| exon-exon | PPIL4 | 6 | - | ZC3H12D | 6 | - |
| exon-exon | POGLUT3 | 11 | + | LOC112267909 | 11 | + |
| exon-intron | FCHO2 | 5 | + | ATF7-NPFF | 12 | - |
| intron-exon | PHYKPL | 5 | - | HNRNPAB | 5 | - |
| exon-exon | PTGDR2 | 11 | - | CCDC86 | 11 | - |
| intron-exon | AC067930.4 | 8 | + | NAPRT | 8 | + |
| exon-intron | CCNA2 | 4 | + | PARN | 16 | - |
| exon-exon | TRAJ15 | 14 | + | TRAC | 14 | + |
| intron-exon | KCNK15-AS1 | 20 | - | LINC01260 | 20 | - |
| intron-exon | AC135584.1 | 12 | - | AVPR1A | 12 | - |
| intron-exon | IGH | 14 | - | IGHV4-34 | 14 | - |
| exon-intron | ATP8 | MT | + | POLR2B | 4 | + |
| exon-intron | CSPG4P13 | 15 | + | DNM1P9 | 15 | + |
| exon-intron | POLR2J2 | 7 | - | POLR2J3 | 7 | - |
| intron-exon | THNSL1 | 10 | - | PRTFDC1 | 10 | - |
| intron-exon | DMD | X | + | XPO1 | 2 | + |
| exon-exon | CTSL | 9 | + | FRA10AC1 | 10 | - |
| intron-exon | BZW1 | 2 | + | LINC00667 | 18 | + |
| exon-intron | PPIEL | 1 | - | YIPF5 | 5 | - |
| intron-exon | UBE2E1 | 3 | + | SERF2-C15ORF63 | 15 | + |
| exon-exon | NDUFA11 | 19 | + | NDUFA11 | 19 | - |
| intron-exon | SOX2-OT | 3 | + | SQSTM1 | 5 | + |
| exon-exon | LAMB1 | 7 | + | CHMP5 | 9 | + |
| exon-exon | SLC20A1 | 2 | + | RMDN1 | 8 | - |
| intron-exon | POLR2J4 | 7 | - | ND4 | MT | + |
| exon-exon | TMA7 | 3 | + | PPFIA1 | 11 | + |
| exon-intron | CDKN2A | 9 | - | RP11-145E5.5 | 9 | - |
| exon-exon | ACTG1 | 17 | + | ACTG1 | 17 | - |
| exon-intron | LRRK1 | 15 | + | GSTA4 | 6 | - |
| intron-exon | CD160 | 1 | - | PDZK1 | 1 | - |
| exon-exon | ATP1A3 | 19 | + | SOX4 | 6 | + |
| exon-intron | RNA45SN3 | 21 | + | LRIF1 | 1 | - |
| exon-intron | MIATNB | 22 | + | LINC01422 | 22 | + |
| exon-intron | ND4L | MT | + | IGKC | 2 | - |
| exon-intron | SAP30L-AS1 | 5 | - | GALNT10 | 5 | - |
| exon-exon | SPATS2L | 2 | + | CASP10 | 2 | + |
| exon-intron | SFN | 1 | - | IMMP2L | 7 | - |
| exon-intron | LINC02268 | 4 | - | LOC107986204 | 4 | - |
| intron-exon | NEDD4L | 18 | + | AVPR1A | 12 | - |
| exon-exon | GIMAP7 | 7 | + | ZNF212 | 7 | + |
| exon-intron | FTH1 | 11 | - | BIN3 | 8 | - |
| exon-intron | LOC107984814 | 16 | - | LINC01572 | 16 | - |
| exon-exon | TMSB4XP8 | 4 | - | MCM6 | 2 | - |
| exon-intron | RNA45SN3 | 21 | + | DNAJC1 | 10 | - |
| exon-exon | ARID2 | 12 | - | ARID2 | 12 | + |
| exon-intron | SMR3B | 4 | + | MYH9 | 22 | - |
| exon-intron | STATH | 4 | - | CHRM3 | 1 | - |
| exon-exon | ANP32E | 1 | - | EDEM1 | 3 | + |
| exon-exon | MALAT1 | 11 | + | MUC7 | 4 | + |
| exon-exon | MALAT1 | 11 | + | MUC7 | 4 | + |
| intron-exon | LOC112268211 | 18 | - | HHIP | 4 | + |
| exon-intron | NEFM | 8 | - | NOL4 | 18 | + |
| intron-exon | EVA1C | 21 | - | KSR2 | 12 | + |
| intron-exon | GMDS-DT | 6 | - | LRRC41 | 1 | - |
| exon-exon | ND4 | MT | + | ILF3 | 19 | + |
| exon-intron | LOC105373785 | 2 | - | LINC01473 | 2 | - |
| exon-intron | RNA45SN2 | 21 | + | KDM6A | X | + |
| exon-exon | HINT1 | 5 | + | DYNC2H1 | 11 | - |
| exon-exon | COX1 | MT | + | MAF1 | 8 | + |
| exon-exon | LOC105374031 | 3 | - | CD47 | 3 | - |
| intron-exon | TYW1B | 7 | + | LOC101928032 | Y | - |
| exon-exon | IGSF9B | 11 | - | MIR4697HG | 11 | - |
| intron-exon | ZNF780A | 19 | - | ZNF780B | 19 | - |
| exon-exon | SF1 | 11 | - | ZFP28 | 19 | + |
| exon-exon | LOC107985902 | 2 | + | CTNNA2 | 2 | + |
| exon-exon | GTF2IP12 | 4 | - | LOC107983979 | 4 | - |
| intron-exon | PTPN3 | 9 | + | PALM2AKAP2 | 9 | + |
| exon-intron | UBE4B | 1 | + | PTK2 | 8 | - |
| exon-exon | RNA45SN3 | 21 | + | MN1 | 22 | - |
| exon-intron | ALB | 4 | - | GTF2H2 | 5 | - |
| exon-exon | IP6K2 | 3 | + | IP6K2 | 3 | - |
| intron-exon | PLCB1 | 20 | - | TMX4 | 20 | - |
| exon-exon | CRYZL2P-SEC16B | 1 | + | CRYZL2P-SEC16B | 1 | - |
| intron-exon | LRMDA | 10 | + | CREB1 | 2 | + |
| exon-intron | SLC4A1 | 17 | - | LOC101927789 | 11 | + |
| exon-intron | RNA45SN1 | 21 | + | RNR2 | MT | + |
| exon-intron | TMEM167B | 1 | + | TRAPPC10 | 21 | - |
| intron-exon | FAM120B | 6 | + | PRSS1 | 7 | + |
| intron-exon | AC136475.3 | 11 | + | PGGHG | 11 | + |
| exon-intron | RNA45SN3 | 21 | + | ME3 | 11 | - |
| exon-exon | MDN1 | 6 | - | ALDH1L1 | 3 | - |
| exon-exon | ND4L | MT | + | ATP8 | MT | + |
| intron-exon | CNTN6 | 3 | + | LOC105376123 | 9 | + |
| exon-exon | SERPINA1 | 14 | + | IFITM10 | 11 | - |
| exon-exon | INS-IGF2 | 11 | + | PPP4R1 | 18 | - |
| exon-exon | RYR2 | 1 | + | CALR | 19 | + |
| exon-intron | MALAT1 | 11 | + | NEDD4L | 18 | + |
| exon-exon | PKP1 | 1 | - | PKP1 | 1 | + |
| exon-exon | AQP7 | 9 | - | COX1 | MT | + |
| intron-exon | AC079140.6 | 4 | + | ZNF141 | 4 | + |
| exon-exon | ALDH18A1 | 10 | - | ZNF271P | 18 | + |
| exon-exon | ELOA-AS1 | 1 | - | PHC2 | 1 | - |
| intron-exon | SLC44A1 | 9 | + | KDM2A | 11 | + |
| exon-intron | EFCAB2 | 1 | + | EHBP1 | 2 | + |
| intron-exon | ZNF724 | 19 | - | RPL19 | 17 | + |
| intron-exon | USP13 | 3 | - | GNB4 | 3 | - |
| exon-exon | TMBIM6 | 12 | + | NOTCH2 | 1 | - |
| exon-exon | ABHD17C | 15 | + | PTOV1-AS2 | 19 | - |
| intron-exon | IGH | 14 | - | IGHV3-74 | 14 | - |
| exon-exon | BAG5 | 14 | + | BAG5 | 14 | - |
| exon-exon | RBM25 | 14 | - | RBM25 | 14 | + |
| exon-exon | KIAA1958 | 9 | - | KIAA1958 | 9 | + |
| exon-exon | CALML3 | 10 | + | GAS8 | 16 | + |
| exon-exon | SPAG7 | 17 | + | SPAG7 | 17 | - |
| intron-exon | TCF25 | 16 | - | TCF25 | 16 | + |
| exon-intron | INS-IGF2 | 11 | + | NEK7 | 1 | + |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN1 | 21 | + |
| exon-intron | ACVR2B-AS1 | 3 | - | XYLB | 3 | - |
| exon-intron | RNF19B | 1 | + | CCDC7 | 10 | - |
| exon-intron | LOC107984931 | 1 | + | MYOM3 | 1 | + |
| intron-exon | ZNF560 | 19 | + | LOC105372268 | 19 | + |
| intron-exon | MOB2 | 11 | + | MOB2 | 11 | - |
| exon-intron | TRIM58 | 1 | + | OR2W3 | | + |
| exon-intron | ZNF449 | | + | HMGB1 | 13 | - |
| exon-exon | RNA45SN3 | 21 | + | N4BP1 | 16 | - |
| exon-intron | NRAV | | - | DYNLL1 | 12 | - |
| exon-exon | LETM1 | 4 | - | FGFR3 | 4 | - |
| exon-exon | CUL9 | 6 | + | MUC7 | 4 | + |
| exon-exon | HCN1 | 5 | + | HCN1 | 5 | - |
| intron-exon | PLEKHS1 | 10 | + | PRH2 | 12 | + |
| intron-exon | CREB3L2 | 7 | - | COX3 | MT | + |
| exon-intron | NKTR | 3 | + | CACNB2 | 10 | + |
| intron-exon | SNCG | | + | ATP6 | MT | + |
| intron-exon | OR10Y1P | | + | STX3 | 11 | + |
| exon-exon | SPPL2B | 19 | - | ELL2 | 5 | - |
| intron-exon | SLC16A13 | 17 | + | JOSD1 | 22 | - |
| exon-intron | IGHJ5 | 14 | - | IGHG1 | 14 | - |
| exon-intron | IGHJ6 | 14 | - | IGHG1 | 14 | - |
| intron-exon | PRUNE2 | 9 | + | TOR1AIP1 | 1 | + |
| intron-exon | ABO | 9 | - | ASRGL1 | 11 | + |
| exon-exon | LOC105373250 | | + | PCGF3 | 4 | + |
| intron-exon | TSC22D1-AS1 | 13 | + | TSC22D1 | 13 | - |
| intron-exon | ACOX1 | 17 | - | DNAJC10 | 2 | + |
| exon-intron | XAF1 | 17 | + | ADCY3 | 2 | - |
| intron-exon | RPS20 | 8 | - | SRCAP | 16 | - |
| exon-intron | LINC02256 | 15 | + | LOC101928042 | 15 | + |
| exon-exon | SLC25A32 | 8 | - | LOC105369147 | 8 | - |
| exon-exon | G3BP1 | 5 | + | VTI1B | 14 | - |
| exon-intron | LIMS1 | 2 | + | RNF185 | 22 | + |
| exon-exon | NIN | 14 | - | DOK3 | 5 | - |
| intron-exon | LOC112081402 | 11 | + | LOC105369318 | 11 | + |
| exon-intron | SPRY4-AS1 | 5 | + | FGF1 | 5 | + |
| exon-exon | MGAT5 | 2 | - | MGAT5 | 2 | + |
| exon-exon | SRRM2 | 16 | - | SRRM2 | 16 | + |
| exon-intron | GUF1 | 4 | + | GNPDA2 | 4 | + |
| intron-exon | EDNRB | 13 | + | OBI1-AS1 | 13 | + |
| exon-intron | PPP1R3D | 20 | - | FAM217B | 20 | - |
| intron-exon | SPI1 | 11 | + | SLC39A13 | 11 | + |
| exon-exon | CAPN13 | 2 | + | CAPN13 | 2 | - |
| exon-intron | CEP43 | 6 | + | CCR6 | 6 | + |
| exon-exon | RUSC2 | 9 | + | ND1 | MT | + |
| exon-exon | ORMDL3 | 17 | - | GSDMB | 17 | - |
| exon-intron | EML4 | 2 | + | EGLN3 | 14 | + |
| exon-intron | AFMID | 17 | + | LOC101929638 | 22 | + |
| exon-exon | AMPD1 | 1 | - | FYTTD1 | 3 | + |
| intron-exon | RTKN2 | 10 | + | ZNF365 | 10 | + |
| exon-exon | COX1 | MT | + | ND4 | MT | + |
| intron-exon | ATG14 | 14 | + | LOC107984664 | | + |
| intron-exon | TOLLIP | 11 | - | ND1 | MT | + |
| exon-intron | BHLHA15 | 7 | + | TECPR1 | 7 | + |
| exon-intron | LOC105378180 | 14 | - | NID2 | 14 | - |
| exon-intron | PHETA2 | 19 | + | RCN3 | 19 | - |
| exon-intron | CRACR2A | 12 | - | LOC107984495 | 12 | - |
| exon-exon | LTBP2 | 14 | - | CYB561 | 17 | - |
| intron-exon | RFC1 | 4 | - | SART1 | 11 | + |
| exon-intron | IGHA1 | 14 | - | RUNX1 | 21 | - |
| intron-exon | NAALADL2 | 3 | + | ATP6 | MT | + |
| intron-exon | MICD | 6 | + | BET1L | 11 | - |
| exon-intron | AKIP1 | 11 | + | ZNF724 | 19 | + |
| intron-exon | ITSN1 | 21 | + | ND1 | MT | + |
| exon-exon | SILC1 | 2 | + | MXRA7 | 17 | - |
| intron-exon | CNNM4 | | + | KIF1A | 2 | - |
| exon-intron | PITRM1 | 10 | - | PFKP | 10 | - |
| exon-intron | ZFHX4 | 8 | + | ZSWIM4 | 19 | - |
| exon-exon | MAP4 | 3 | - | TNNC2 | 20 | - |
| exon-intron | GABPB2 | 1 | - | MLLT11 | 1 | - |
| exon-exon | FAT1 | 4 | + | FAT1 | 4 | - |
| exon-exon | MTX2 | 2 | + | LNPK | 2 | - |
| intron-exon | FHIT | 3 | - | SLC30A6 | 2 | + |
| exon-intron | ZNF552 | 19 | + | ZNF586 | 19 | + |
| exon-intron | HOXB8 | 17 | - | DIAPH1 | 5 | - |
| exon-intron | INS-IGF2 | 11 | + | TRIM2 | 4 | + |
| intron-exon | SECISBP2 | 9 | + | INS-IGF2 | 11 | - |
| intron-exon | THAP2 | 12 | - | ZFC3H1 | 12 | - |
| intron-exon | BTBD9 | 6 | - | PTCH2 | 1 | - |
| intron-exon | SYN3 | 22 | - | TIMP3 | 22 | + |
| exon-exon | ZNF644 | 1 | + | ZNF644 | 1 | - |
| exon-exon | RNA45SN3 | 21 | + | NARS1 | 18 | - |
| intron-exon | IDS2 | X | - | IDS | X | - |
| exon-intron | LOC107987206 | 14 | + | ND4 | MT | + |
| exon-intron | BPTF | 17 | + | EPB41L2 | 6 | - |
| intron-exon | NUP93 | 16 | - | HORMAD1 | 1 | - |
| exon-exon | HSP90B1 | 12 | - | HSP90B1 | 12 | + |
| exon-intron | COX1 | MT | + | ND4 | MT | + |
| intron-exon | RNR2 | MT | + | CES2 | 16 | + |
| exon-exon | RPS2P5 | 12 | + | MFF | 2 | + |
| exon-exon | RNA45SN3 | 21 | + | CAMSAP1 | 9 | - |
| intron-exon | RNR1 | MT | + | TCEAL3 | X | + |
| exon-exon | ATP1A3 | 19 | - | RPS19 | 19 | + |
| intron-exon | RNA28SP | 21 | + | NSG1 | 4 | + |
| exon-intron | KLHL28 | 14 | - | SCFD1 | 14 | + |
| exon-exon | DDX19A | 16 | - | DDX19A | 16 | + |
| exon-exon | ERLIN1 | 10 | + | ERLIN1 | 10 | - |
| exon-exon | APBB1 | 11 | - | UBC | 12 | - |
| exon-intron | LOC100419920 | 2 | + | OR7E102P | 2 | + |
| exon-exon | SEPTIN3 | 22 | - | SEPTIN3 | 22 | + |
| exon-exon | GNAI2 | 3 | + | NT5DC2 | 3 | - |
| exon-exon | CDR1 | X | + | ELAVL4 | 1 | + |
| exon-exon | SRRM1 | 1 | - | SRRM1 | 1 | + |
| intron-exon | LOC101927461 | 10 | - | TCERG1L | 10 | - |
| exon-exon | LOC105374235 | 3 | - | LOC107986155 | 3 | - |
| intron-exon | LOC105376686 | 1 | - | LOC107984911 | 1 | - |
| exon-exon | RTKN | 2 | + | RTKN | 2 | - |
| intron-exon | AP001453.2 | 11 | - | PPP1R14B-AS1 | 11 | - |
| exon-exon | HMBOX1 | 8 | + | MALAT1 | 11 | + |
| intron-exon | RPS14 | 5 | + | HABP4 | 9 | + |
| exon-exon | PTGS1 | 9 | - | CELSR2 | 1 | + |
| exon-intron | TUBG1 | 17 | - | PLEKHA1 | 10 | + |
| intron-exon | GOLGA3 | 12 | - | SLC35B2 | 6 | - |
| exon-exon | DENND2D | 1 | + | BMP2K | 4 | + |
| intron-exon | RPL13AP5 | 10 | - | RPS21 | 20 | + |
| exon-exon | TLR8-AS1 | X | - | PRPS2 | X | + |
| exon-exon | NT5DC2 | 3 | - | CYB5R1 | 1 | - |
| exon-exon | ATXN2L | 16 | - | ATF5 | 19 | + |
| intron-exon | RNR2 | MT | + | GTSF1 | 12 | - |
| exon-exon | RPLP1 | 15 | - | SNU13 | 22 | - |
| exon-exon | HTT | 4 | - | MITF | 3 | + |
| exon-exon | COX17 | 3 | - | POPDC2 | 3 | - |
| exon-intron | TRABD | 22 | - | NSFL1C | 20 | - |
| exon-exon | ARL8A | 1 | - | STARD3NL | 7 | + |
| intron-exon | COX3 | MT | - | IDH3B | 20 | - |
| intron-exon | PGAM2 | 7 | - | MLEC | 12 | + |
| exon-intron | LOC105371763 | 17 | - | LOC105371764 | 17 | - |
| exon-intron | TNFRSF10A | 8 | - | TNFRSF10A-AS1 | 8 | - |
| exon-exon | COX7B | X | - | PFN1 | 17 | - |
| intron-exon | PHEX | X | - | RPS18P5 | 3 | - |
| intron-exon | SALL2 | 14 | + | CALR | 19 | + |
| intron-exon | LINC02324 | 14 | + | GTSE1 | 22 | + |
| exon-exon | MALAT1 | 11 | + | S100A10 | 1 | - |
| exon-exon | NAMPTP1 | | + | ARPC3 | 12 | - |
| exon-intron | ATP5F1B | 12 | - | C1QTNF3 | 5 | - |
| exon-exon | SLC44A1 | 9 | - | SLC44A1 | 9 | + |
| exon-exon | MAP1A | 15 | + | SPHK2 | 19 | + |
| intron-exon | SETD2 | 3 | - | F3 | 1 | - |
| exon-exon | RAB34 | 17 | + | RAB34 | 17 | - |
| intron-exon | BMS1P20 | 22 | + | CXorf38 | | - |
| intron-exon | PPIAP22 | 21 | - | PPIA | 7 | + |
| exon-exon | F11R | 1 | + | F11R | 1 | - |
| exon-exon | PCDHB16 | 5 | - | PCDHB6 | 5 | + |
| exon-exon | METAP2 | 12 | - | METAP2 | 12 | + |
| intron-exon | ZNF385D | | - | GLYR1 | 16 | - |
| intron-exon | DLGAP4 | 20 | - | MAF | 16 | - |
| intron-exon | TRNN | MT | + | LPCAT1 | 5 | + |
| exon-exon | ELAVL3 | 19 | + | BRWD1 | 21 | - |
| intron-exon | ZNF385D | | - | TMEM179 | 14 | - |
| exon-exon | DYRK2 | 12 | + | DYRK2 | 12 | - |
| exon-intron | ND5 | MT | - | KDM4C | 9 | + |
| exon-exon | STK38L | 12 | - | IQCB1 | 3 | - |
| exon-exon | HSPA1A | 6 | - | TARDBP | 1 | + |
| exon-exon | AMOTL2 | 3 | + | ADD3 | 10 | + |
| exon-exon | UFM1 | 13 | - | ASB8 | 12 | - |
| exon-intron | GNG12-AS1 | | + | RNR2 | MT | + |
| exon-exon | COL3A1 | 2 | - | THBS2 | 6 | - |
| intron-exon | AP005212.4 | 18 | + | CYP4F35P | | + |
| intron-exon | ST3GAL1 | 8 | - | ND2 | MT | + |
| exon-exon | H19 | 11 | - | COL1A1 | 17 | - |
| intron-exon | RAB3GAP2 | 1 | + | MORF4L1P1 | 1 | + |
| exon-intron | SERINC1 | 6 | - | TRAM2 | 6 | - |
| intron-exon | RAB3GAP2 | 1 | + | MORF4L1P1 | 1 | + |
| exon-exon | NEAT1 | 11 | + | CSF3R | 1 | - |
| exon-exon | CGA | 6 | + | RAB1A | 2 | - |
| exon-intron | MPP4 | | - | AC007279.2 | | - |
| intron-exon | TXNL4B | 16 | - | HP | 16 | + |
| intron-exon | CAMSAP1 | 9 | - | LOC101928451 | 7 | - |
| exon-exon | CNDP2 | 18 | - | ATP6 | MT | - |
| intron-exon | PDE6A | 5 | + | CD74 | 5 | + |
| exon-exon | RPLP1P4 | 2 | + | SLC26A11 | 17 | - |
| exon-exon | C18orf32 | 18 | + | RPL17-C18orf32 | 18 | + |
| exon-exon | FTLP3 | 20 | - | CHRNB2 | 1 | + |
| exon-exon | HLA-DQB1 | 6 | + | CORO1C | 12 | + |
| exon-exon | PI4K2A | 10 | - | PFDN5 | 12 | - |
| exon-exon | NUPR1 | 16 | + | ATP6V0C | 16 | - |
| exon-exon | SERF2-C15ORF63 | 15 | - | HLA-DQA1 | 6 | - |
| intron-exon | LOC101927369 | 17 | - | MCL1 | 1 | + |
| exon-intron | HSPB1P1 | 9 | + | LOC112268284 | 21 | - |
| intron-exon | COLEC11 | 2 | + | CSF1 | 1 | - |
| exon-exon | TIAL1 | 10 | + | PSAP | 10 | + |
| exon-exon | RNASEK-C17orf49 | 17 | - | PRPF8 | 17 | + |
| exon-exon | HOTAIRM1 | 7 | - | EEF2 | 19 | + |
| exon-exon | JAZF1 | 7 | + | MCFD2 | 2 | + |
| intron-exon | ATP5F1EP2 | 13 | - | CSF1 | 1 | - |
| exon-exon | SNHG16 | 17 | - | MZT2A | 2 | + |
| exon-exon | MT1XP1 | 1 | + | RNF216 | 7 | + |
| exon-exon | NEDD8-MDP1 | 14 | + | ARV1 | 1 | - |
| exon-intron | RPS8P8 | 5 | - | IGH | 14 | - |
| exon-exon | TMEM59 | 1 | + | TMEM242 | 6 | + |
| exon-exon | RPA2 | 1 | + | SERPING1 | 11 | - |
| exon-exon | VKORC1 | 16 | + | ATP6V0C | 16 | - |
| exon-exon | SMCO4 | 11 | + | FTH1 | 11 | + |
| exon-exon | S100A11 | 1 | + | RNF19B | 1 | + |
| exon-exon | ZC3HAV1 | 7 | + | CTSS | 1 | + |
| exon-exon | RPL18 | 19 | + | CCDC32 | 15 | + |
| exon-exon | RNASEK-C17orf49 | 17 | - | TIMMDC1 | 3 | - |
| exon-exon | CTSZ | 20 | + | CLIC1 | 6 | + |
| exon-exon | PRKCD | 3 | - | TFIP11 | 22 | + |
| intron-exon | DLEU2 | 13 | - | RNA45SN1 | 21 | - |
| intron-exon | LOC101927369 | 17 | - | ALOX5AP | 13 | - |
| exon-exon | PLD3 | 19 | - | PLD3 | 19 | + |
| exon-exon | METRNL | 17 | - | UBC | 12 | + |
| exon-exon | CYTB | MT | - | MCL1 | 1 | + |
| exon-exon | LOC100287189 | 11 | + | ARPIN-AP3S2 | 15 | + |
| exon-exon | LYZ | 12 | - | MS4A7 | 11 | - |
| exon-exon | VCL | 10 | - | VCL | 10 | + |
| exon-exon | PABPC1 | 8 | + | PABPC1 | 8 | - |
| exon-exon | ND2 | MT | - | ND2 | MT | + |
| exon-exon | YTHDC1 | 4 | + | YTHDC1 | 4 | - |
| exon-exon | ARNTL | 11 | - | ARNTL | 11 | + |
| intron-exon | LINC02320 | 14 | - | RPL26P19 | | - |
| exon-exon | RILPL2 | 12 | + | RILPL2 | 12 | - |
| exon-exon | CEBPD | 8 | + | CEBPD | 8 | - |
| exon-exon | HSPBP1 | 19 | + | TRIM8 | 10 | - |
| exon-exon | MPC2 | 1 | + | MPC2 | 1 | - |
| intron-exon | RHOT1 | 17 | + | UBL5 | 19 | + |
| exon-exon | YWHAZP3 | | - | YWHAZ | 8 | - |
| exon-exon | KMT2C | 7 | + | KMT2C | 7 | - |
| intron-exon | RNR2 | MT | - | GABRP | 5 | - |
| exon-intron | RPL10P16 | 19 | + | HIC2 | | + |
| exon-exon | SFMBT1 | 3 | + | SFMBT1 | 3 | - |
| exon-exon | NFE2L2 | 2 | + | NFE2L2 | 2 | - |
| exon-exon | PTPN2 | 18 | + | PTPN2 | | - |
| exon-intron | NDC80 | 18 | - | NDC80 | 18 | + |
| exon-exon | DYNC1I2 | 2 | - | DYNC1I2P1 | 10 | - |
| exon-exon | USP42 | 7 | - | USP42 | 7 | + |
| exon-exon | PSAP | 10 | + | MAP3K5 | 6 | - |
| exon-exon | GZF1 | 20 | - | PTRH2 | 17 | - |
| exon-intron | MPRIP | 17 | - | ZKSCAN7-AS1 | | - |
| exon-exon | C11orf54 | 11 | - | C11orf54 | 11 | + |
| exon-intron | LOC112268056 | 9 | - | FBXO34 | 14 | + |
| exon-exon | F3 | 1 | + | RBM41 | X | + |
| exon-exon | MPC2 | 1 | + | MPC2 | 1 | - |
| exon-exon | SLC4A1AP | 2 | - | SLC4A1AP | 2 | + |
| exon-exon | PPP3CB | 10 | + | PPP3CB | 10 | - |
| exon-exon | WWTR1 | 3 | + | WWTR1 | 3 | - |
| exon-exon | AHCY | 20 | + | AHCY | 20 | - |
| intron-exon | LSAMP | 3 | - | LSG1 | 3 | - |
| intron-exon | MIR3681HG | 2 | - | ST13 | 22 | - |
| exon-exon | SRSF4 | 1 | + | SRSF4 | 1 | - |
| exon-exon | ARHGEF4 | 2 | + | FAM168B | 2 | - |
| exon-exon | ISCU | 12 | - | ISCU | 12 | + |
| exon-exon | FAM81B | 5 | - | FAM81B | 5 | + |
| exon-exon | CYB5B | 16 | - | CYB5B | 16 | + |
| intron-exon | FNBP1L | 1 | + | BCAR3 | 1 | - |
| exon-exon | NDUFA1 | X | - | SPRED2 | 2 | + |
| exon-exon | GRAMD2B | 5 | - | GRAMD2B | 5 | + |
| intron-exon | LOC105373194 | X | - | UBA1 | X | + |
| exon-exon | PPP3CA | 4 | + | PPP3CA | 4 | - |
| exon-exon | TXN2 | 22 | + | TXN2 | 22 | - |
| exon-exon | PUM3 | 9 | + | PUM3 | 9 | - |
| exon-exon | RBM23 | 14 | + | ARHGAP5 | | + |
| exon-exon | HSP90AB1 | 6 | - | HSP90AB1 | 6 | + |
| exon-exon | EIF3M | 11 | - | EIF3M | 11 | + |
| exon-exon | TIMM21 | 18 | - | TNC | 9 | - |
| exon-exon | PIGG | 4 | - | PIGG | 4 | + |
| exon-exon | ATP8 | MT | - | RPL30 | 8 | - |
| exon-exon | GALNT18 | 11 | + | ND4 | MT | + |
| exon-exon | AHCYL1 | 1 | - | AHCYL1 | 1 | + |
| exon-exon | IPO7 | 11 | - | IPO7 | 11 | + |
| exon-intron | JMJD6 | 17 | + | SEC14L1 | 17 | + |
| intron-exon | MED12L | 3 | + | GPR87 | 3 | - |
| intron-exon | ADCY7 | 16 | + | BRD7 | 16 | + |
| exon-intron | METAP1 | 2 | - | MTATP6P1 | 1 | + |
| exon-exon | UQCRB | 8 | + | UQCRB | 8 | - |
| exon-exon | PSMA7 | 20 | + | PSMA7 | 20 | - |
| exon-exon | LOC105372593 | 20 | - | BPIFA1 | 20 | + |
| exon-exon | ESCO1 | 18 | + | ESCO1 | 18 | - |
| exon-exon | SREK1 | 5 | - | SREK1 | 5 | + |
| exon-exon | ROMO1 | 20 | - | MAPKAPK5 | 12 | + |
| exon-exon | TMCO1 | 1 | + | TMCO1 | 1 | - |
| exon-exon | PRNP | 20 | - | PRNP | 20 | + |
| exon-intron | SQSTM1 | 5 | - | RPS20P10 | | - |
| exon-exon | NEURL3 | | + | NEURL3 | | - |
| exon-exon | RETSAT | 2 | + | HLA-DRB5 | 6 | - |
| exon-exon | ERP29 | 12 | - | SLC6A14 | X | + |
| exon-intron | IFT57 | 3 | + | CD200R1L | 3 | + |
| exon-intron | CFAP45 | 1 | + | BTAF1 | 10 | + |
| exon-intron | CRNDE | | + | ABI1 | | + |
| exon-exon | LOC105370858 | 15 | + | CA12 | 15 | - |
| exon-exon | AKR1C3 | 10 | - | AKR1C3 | 10 | + |
| exon-exon | RBBP8 | 18 | - | RBBP8 | 18 | + |
| exon-exon | ZNF470 | | - | ZNF470 | | + |
| exon-exon | LAPTM4A | 2 | + | ND2 | MT | + |
| exon-exon | BAG3 | 10 | - | BAG3 | 10 | + |
| exon-exon | LOC105378663 | 1 | + | RHBDL2 | | + |
| intron-exon | NLN | | - | SASH1 | 6 | - |
| exon-exon | NT5DC1 | 6 | - | NT5DC1 | 6 | + |
| exon-exon | MNT | 17 | + | RPL38 | 17 | - |
| exon-exon | NFKB1 | 4 | - | NFKB1 | 4 | + |
| exon-exon | COX11 | 17 | - | TOM1L1 | | + |
| exon-exon | DBT | 1 | + | DBT | 1 | - |
| exon-exon | NUP205 | 7 | - | NUP205 | 7 | + |
| exon-exon | ND3 | MT | - | GALNT2 | 1 | + |
| exon-exon | ND6 | MT | - | ANP32B | 9 | + |
| exon-exon | KIAA0232 | 4 | - | KIAA0232 | 4 | + |
| exon-exon | NDUFAB1 | 16 | + | CYTB | MT | + |
| exon-exon | SF3B5 | | + | ND3 | MT | + |
| exon-exon | PDSS2 | 6 | + | PDSS2 | 6 | - |
| exon-exon | RAI14 | 5 | - | RAI14 | 5 | + |
| intron-exon | ELOCP2 | | - | ELOC | 8 | - |
| intron-exon | RPL23AP82 | | - | GRSF1 | 4 | - |
| exon-exon | MRPL51 | 12 | + | MRPL51 | 12 | - |
| exon-exon | CYP4X1 | 1 | - | CYP4X1 | 1 | + |
| intron-exon | WDR47 | 1 | - | RPL17P6 | 1 | + |
| exon-exon | ND2 | MT | - | CDC26 | 9 | - |
| exon-exon | SEL1L | 14 | + | SEL1L | 14 | - |
| exon-exon | ZMAT1 | X | + | ZMAT1 | X | - |
| exon-exon | MAPKBP1 | 15 | - | MAPKBP1 | 15 | + |
| exon-intron | TAF15 | 17 | - | LOC101928035 | | + |
| exon-exon | RAP1B | 12 | - | RAP1BL | 5 | - |
| intron-exon | IGH | 14 | + | RPS8 | 1 | + |
| exon-exon | FRAT1 | 10 | - | FRAT1 | 10 | + |
| exon-exon | TEKT1 | | + | TEKT1 | | - |
| exon-exon | SRPRB | 3 | - | SRPRB | 3 | + |
| exon-exon | TTC27 | | - | TTC27 | 2 | + |
| exon-intron | NCBP2 | 3 | - | TEKT4P2 | 21 | - |
| exon-intron | MFGE8 | 15 | + | UGP2 | 2 | - |
| exon-exon | RAB11FIP1 | 8 | + | RAB11FIP1 | 8 | - |
| exon-exon | ZNHIT6 | 1 | + | ZNHIT6 | 1 | - |
| intron-exon | RPS27AP5 | | - | RPS27AP5 | | + |
| exon-exon | TMCC1 | 3 | + | TMCC1 | 3 | - |
| exon-exon | KAT6A | 8 | + | KAT6A | 8 | - |
| intron-exon | SRD5A3-AS1 | 4 | - | SRD5A3 | 4 | + |
| exon-exon | PSMA2 | 7 | + | PSMA2 | 7 | - |
| intron-exon | DPY19L1P1 | 7 | - | AVL9 | 7 | + |
| exon-exon | CD40 | 20 | - | ND3 | MT | + |
| intron-exon | NME2P1 | 12 | - | NME1-NME2 | 17 | + |
| intron-exon | TMEM246-AS1 | 9 | + | PGAP4 | 9 | - |
| exon-exon | TMEM184A | 7 | - | MAFK | 7 | - |
| exon-exon | KIF24 | 9 | - | UBAP1 | 9 | + |
| exon-exon | PTMA | 2 | - | ND4 | MT | + |
| exon-exon | DDX5 | 17 | + | DDX5 | 17 | - |
| exon-exon | RNF141 | 11 | + | RNF141 | 11 | - |
| exon-exon | BZW1P2 | 3 | + | BZW1 | 2 | + |
| exon-exon | TMEM223 | 11 | + | TMEM223 | | - |
| intron-exon | SCOC | 4 | + | RPL14 | 3 | + |
| exon-exon | ADH5 | 4 | + | ADH5 | 4 | - |
| exon-exon | AP3M1 | 10 | - | VCL | 10 | + |
| exon-exon | MPHOSPH10 | 2 | - | MPHOSPH10 | 2 | + |
| exon-exon | RNA45SN3 | 21 | + | KRT17 | 17 | - |
| exon-intron | RPS19 | 19 | + | OOEP | 6 | - |
| exon-exon | RNA45SN1 | 21 | + | H19 | 11 | - |
| intron-exon | HP1BP3 | 1 | + | UBE2A | X | + |
| exon-exon | RNA45SN1 | 21 | + | CHCHD2 | 7 | - |
| exon-intron | RPS19 | 19 | + | RAB39A | 11 | + |
| exon-exon | RNA45SN1 | 21 | + | RPL13 | 16 | + |
| exon-exon | RNA45SN1 | 21 | + | EIF4H | 7 | + |
| exon-exon | SSR2 | 1 | - | ZNF738 | 19 | + |
| exon-exon | IGFBP5 | 2 | + | IGFBP5 | 2 | - |
| exon-exon | ILF3 | 19 | - | ILF3 | 19 | + |
| exon-intron | LOC101927420 | 7 | - | CLOCK | 4 | - |
| exon-exon | RNA45SN1 | 21 | + | RFNG | 17 | - |
| exon-intron | SUGP2 | 19 | + | LOC105372544 | 20 | + |
| exon-exon | RNA45SN2 | 21 | + | SBNO1-AS1 | 12 | + |
| exon-exon | RNA45SN3 | 21 | + | ACTG1 | 17 | - |
| intron-exon | AMBRA1 | 11 | - | EVL | 14 | + |
| exon-exon | CCDC59 | 12 | - | LOC729496 | 6 | - |
| exon-intron | RNA45SN2 | 21 | + | TXNRD1 | 12 | + |
| intron-exon | HSPB1 | 7 | + | KRT19 | 17 | - |
| exon-exon | PSMD2 | 3 | + | YBX2 | 17 | - |
| exon-exon | RNA45SN1 | 21 | + | RBFOX2 | 22 | - |
| exon-intron | TIGD1 | 2 | - | RCCD1 | 15 | + |
| exon-exon | MAPRE1 | 20 | - | SMS | X | - |
| exon-exon | PSMD2 | 3 | + | HDAC10 | 22 | - |
| exon-exon | RNA45SN1 | 21 | + | NUDT16L1 | 16 | + |
| exon-intron | COPE | 19 | - | ENG | 9 | - |
| exon-exon | B4GALT2 | 1 | - | B4GALT2 | 1 | + |
| exon-exon | LUC7L3 | 17 | + | NBDY | X | + |
| exon-exon | MAPRE2 | 18 | + | SFRP1 | 8 | - |
| exon-exon | EMP2 | 16 | + | EMP2 | 16 | - |
| exon-intron | RNA45SN1 | 21 | + | RPL37P2 | 11 | - |
| exon-exon | NUDC | 1 | + | TXNIP | 1 | - |
| exon-exon | DGAT1 | 8 | - | HSF1 | 8 | - |
| exon-intron | RPL30 | 8 | - | LINC01581 | 15 | + |
| exon-exon | RNA45SN1 | 21 | + | MAEA | 4 | + |
| exon-exon | RBM4B | 11 | - | GSE1 | 16 | + |
| exon-exon | SRP14 | 15 | - | SMARCC1 | 3 | - |
| exon-exon | TP53I3 | 2 | - | TMSB10 | 2 | + |
| exon-intron | RNA45SN2 | 21 | + | ARL14EPL | 5 | - |
| exon-exon | EEF1G | 11 | - | OPN3 | 1 | - |
| exon-intron | ADAM10 | 15 | - | AC018904.1 | | - |
| exon-intron | LOC101927263 | | + | AC087477.2 | | + |
| intron-exon | NPLOC4 | 17 | - | KLHL28 | 14 | - |
| exon-exon | ADO | 10 | - | ADO | 10 | + |
| exon-exon | DDB1 | 11 | - | UPF3A | 13 | + |
| intron-exon | LCOR | 10 | + | ARRB1 | 11 | - |
| intron-exon | PCDH11X | | - | MCCC1 | 3 | + |
| exon-intron | DOCK6 | 19 | - | RANBP9 | 6 | - |
| exon-intron | ATP6V1A | 3 | + | DNAJC12 | | - |
| exon-exon | PVRIG2P | 7 | + | PILRB | 7 | + |
| intron-exon | MARK4 | | - | EXOC3L2 | 19 | - |
| exon-exon | VPS33A | | - | DCLRE1C | 10 | + |
| intron-exon | TPK1 | 7 | - | ZNF483 | 9 | + |
| exon-exon | ND5 | MT | + | PCBP2 | 12 | + |
| exon-exon | ZBTB20 | 3 | - | GNAS | 20 | + |
| exon-exon | TIMP3 | 22 | + | PPT1 | 1 | - |
| intron-exon | GON4L | 1 | + | RPS18P5 | 3 | - |
| exon-exon | H3-3B | 17 | - | H3-3B | 17 | + |
| exon-exon | RNA45SN3 | 21 | + | CCT2 | 12 | + |
| exon-intron | TALAM1 | 11 | - | RNR2 | MT | - |
| intron-exon | RNR2 | MT | + | RRAGD | 6 | - |
| intron-exon | IRS2 | 13 | - | MLH1 | 3 | + |
| exon-exon | DAG1 | 3 | - | NEAT1 | 11 | - |
| exon-exon | YWHAQ | 2 | + | AKIRIN1 | 1 | - |
| exon-exon | HLA-C | 6 | + | HLA-B | 6 | + |
| exon-exon | B2M | 15 | - | SLC37A3 | 7 | + |
| exon-exon | CCN2 | 6 | + | CPNE8 | 12 | + |
| exon-exon | LOC107986956 | 8 | + | LINC00535 | 8 | + |
| exon-intron | C1orf174 | 1 | + | YARS2 | 12 | - |
| exon-exon | CNMD | 13 | + | RNA45SN2 | 21 | - |
| exon-exon | STAT2 | 12 | + | C2orf49 | 2 | - |
| exon-exon | RNASEH2C | 11 | - | KAT5 | 11 | - |
| exon-intron | LDHA | 11 | - | EIF4EBP2 | 10 | - |
| intron-exon | GRHPR | 9 | - | PNO1 | 2 | - |
| exon-exon | COX1 | MT | - | SRSF4 | 1 | + |
| exon-intron | MRPL42 | 12 | - | LINC02167 | 16 | - |
| exon-intron | ND2 | MT | - | FAM172A | 5 | + |
| exon-exon | MVD | 16 | + | PDGFRB | 5 | + |
| intron-exon | AC093459.1 | 2 | + | DZIP1 | 13 | + |
| exon-exon | EZH2 | 7 | + | RUFY2 | 10 | + |
| exon-exon | SH3BGRL3 | 1 | - | LOC146253 | 16 | - |
| exon-exon | NMRAL1 | 16 | + | DEPP1 | 10 | - |
| exon-exon | ANP32B | 9 | - | KLHL32 | 6 | + |
| exon-exon | DOCK9 | 13 | + | DOCK9 | 13 | - |
| exon-exon | CCDC112 | 5 | - | FN1 | 2 | - |
| exon-exon | TNC | 9 | + | ND4 | MT | + |
| intron-exon | MCPH1-AS1 | 8 | - | ANGPT2 | 8 | - |
| exon-exon | ND2 | MT | - | ATP5ME | 4 | - |
| intron-exon | C2orf27AP3 | 9 | - | C2orf27AP3 | 9 | + |
| exon-exon | HEXB | 5 | - | HMGB1 | 13 | + |
| intron-exon | LOC105369743 | 12 | - | RPL15 | 3 | - |
| intron-exon | CMA1 | 14 | - | LOC101927045 | 14 | - |
| intron-exon | COX2 | MT | - | ZYG11B | 1 | - |
| exon-exon | LINC01239 | 9 | - | LINC01239 | 9 | + |
| exon-exon | SENP3-EIF4A1 | 17 | - | SENP3-EIF4A1 | 17 | + |
| exon-exon | PABPC1P4 | 12 | - | PABPC1 | 8 | - |
| exon-exon | NOP58 | 2 | - | NOP58 | 2 | + |
| intron-exon | CCDC144CP | 17 | + | UPF3A | 13 | - |
| exon-exon | COX3 | MT | - | TMSB4X | X | + |
| exon-exon | ND2 | MT | - | HNRNPDL | 4 | - |
| exon-exon | HSP90AA1 | 14 | + | HSP90AA1 | 14 | - |
| exon-exon | ND2 | MT | - | CPNE8 | 12 | + |
| exon-exon | HSP90AA1 | 14 | + | HSP90AA1 | 14 | - |
| exon-exon | ANAPC5 | 12 | + | G6PD | X | + |
| exon-exon | COPS5 | 8 | + | COPS5 | 8 | - |
| exon-exon | ENO1 | 1 | + | ENO1 | 1 | - |
| intron-exon | NACA | 12 | + | PRIM1 | 12 | + |
| exon-exon | PEBP1 | 12 | - | PEBP1 | 12 | + |
| intron-exon | SVIL | 10 | - | CKS1B | 1 | + |
| exon-exon | NAP1L1 | 12 | + | NAP1L1 | 12 | - |
| exon-exon | COPB2 | 3 | + | NDUFV1 | 11 | - |
| exon-exon | CAPZB | 1 | + | ITGB1 | 10 | - |
| exon-exon | ND4 | MT | - | COX1 | MT | - |
| exon-exon | ASB8 | 12 | + | ZDBF2 | 2 | - |
| exon-intron | COL1A1 | 17 | + | GAREM1 | 18 | + |
| exon-exon | CCN1 | 1 | - | COL6A1 | 21 | - |
| intron-exon | AC097451.1 | 4 | - | LOC105374433 | 4 | - |
| exon-exon | LOC105371277 | 16 | - | IRX5 | 16 | - |
| intron-exon | TSNAXIP1 | 16 | + | COL8A1 | 3 | - |
| exon-exon | CLSTN3 | 12 | - | EFNB1 | X | - |
| exon-exon | COL1A1 | 17 | + | ARNT | 1 | + |
| exon-exon | LYL1 | 19 | - | NFIX | 19 | - |
| exon-exon | TP53I13 | 17 | - | TP53I13 | 17 | + |
| exon-exon | BSG | 19 | - | BSG | 19 | + |
| exon-intron | PRC1 | 15 | + | PRC1-AS1 | 15 | + |
| exon-exon | MLF1 | 3 | - | CIZ1 | 9 | + |
| intron-exon | KIZ | 20 | + | RNA45SN1 | 21 | - |
| exon-exon | RNF24 | 20 | - | RPL14 | 3 | - |
| intron-exon | CCR3 | 3 | - | LOC105377067 | 3 | - |
| intron-exon | TTPAL | 20 | + | SERINC3 | 20 | + |
| intron-exon | LOC112268170 | 16 | - | LDHAP4 | 9 | + |
| intron-exon | LOC101929210 | 4 | + | ACTB | 7 | - |
| intron-exon | LOC105370185 | 13 | + | COLGALT1 | 19 | - |
| exon-exon | SGPL1 | 10 | - | SLC31A1 | 9 | - |
| exon-exon | TALAM1 | 11 | - | MALAT1 | 11 | + |
| exon-intron | CCDC28B | 1 | + | IQCC | 1 | + |
| exon-exon | RPLP2 | 11 | - | CALR | 19 | - |
| exon-intron | CAPN12 | 19 | - | LOC107985291 | 19 | - |
| exon-intron | ND2 | MT | - | NAGK | 2 | - |
| intron-exon | PSMB7 | 9 | - | NEK6 | 9 | - |
| exon-exon | SFXN3 | 10 | - | RCHY1 | 4 | + |
| exon-intron | ND4 | MT | - | LOC107984340 | 11 | - |
| intron-exon | KCTD8 | 4 | + | CD68 | 17 | - |
| exon-intron | ATP6 | MT | - | DPY30 | 2 | + |
| intron-exon | LOC100507065 | 12 | + | LOC105369808 | 12 | + |
| exon-exon | AURKAIP1 | 1 | + | TALAM1 | 11 | - |
| intron-exon | LOC349160 | 7 | - | HECTD3 | 1 | + |
| exon-exon | CD33 | 19 | - | RNA45SN1 | 21 | - |
| intron-exon | KIAA1671 | 22 | + | SCAF4 | 21 | - |
| exon-exon | EPAS1 | 2 | - | SMARCD3 | 7 | + |
| exon-exon | HOXC8 | 12 | - | HOXC8 | 12 | + |
| exon-exon | ITM2C | 2 | - | STAT1 | 2 | - |
| exon-exon | NUS1 | 6 | - | NUS1 | 6 | + |
| exon-intron | EPHA1 | 7 | - | NUDCD3 | 7 | + |
| intron-exon | LOC105372947 | 22 | - | IGLV1-36 | 22 | - |
| exon-exon | GRN | 17 | - | RNA45SN2 | 21 | - |
| exon-exon | SMTN | 22 | - | RNA45SN2 | 21 | - |
| exon-exon | IGLL5 | 22 | - | IGLV3-21 | 22 | - |
| exon-exon | KRAS | 12 | - | COL1A1 | 17 | - |
| exon-exon | NOC4L | 12 | - | PTOV1 | 19 | - |
| intron-exon | IGL | 22 | - | IGLV10-54 | 22 | - |
| exon-intron | TTYH2 | 17 | - | DCAF5 | 14 | + |
| exon-exon | HMCES | 3 | - | PTCH1 | 9 | + |
| intron-exon | LINC02067 | 3 | + | SLC25A42 | 19 | + |
| exon-exon | ATP6V0C | 16 | - | RNA45SN2 | 21 | - |
| exon-exon | ELOVL1 | 1 | + | MED8 | 1 | + |
| exon-exon | RPL10P16 | 19 | + | HUWE1 | X | + |
| exon-exon | ATP6 | MT | - | NMT1 | 17 | - |
| exon-exon | HSPA4 | 5 | - | HSPA4 | 5 | + |
| exon-intron | CTSB | 8 | + | ANKRD11 | 16 | + |
| exon-exon | COL1A1 | 17 | + | MRFAP1 | 4 | - |
| exon-exon | ND2 | MT | - | NOP53 | 19 | - |
| exon-exon | MAPK14 | 6 | - | DPY30 | 2 | - |
| exon-exon | SLTM | 15 | + | SLTM | 15 | - |
| exon-exon | COL1A1 | 17 | + | COL1A1 | 17 | - |
| exon-exon | HAX1 | 1 | - | HAX1 | 1 | + |
| intron-exon | HSCB | 22 | - | HSCB | 22 | + |
| exon-exon | TIMMDC1 | 3 | - | RBL2 | 16 | - |
| exon-exon | MFSD2B | 2 | - | ILF3 | 19 | + |
| exon-exon | MAGEA9B | X | + | TACC1 | 8 | + |
| intron-exon | CDK7 | 5 | - | CENPH | 5 | - |
| intron-exon | EML1 | 14 | - | PLEKHA2 | 8 | - |
| exon-exon | PTMS | 12 | - | DDX24 | 14 | - |
| exon-intron | S100A11 | 1 | + | LOC105369657 | 12 | - |
| intron-exon | PHACTR2 | 6 | - | PHACTR2 | 6 | + |
| exon-exon | RPL10P16 | 19 | + | AXL | 19 | - |
| exon-exon | MYO6 | 6 | - | MYO6 | 6 | + |
| exon-exon | PPP1R18 | 6 | + | PPP1R18 | 6 | - |
| exon-exon | PHKG1 | 7 | - | GPATCH1 | 19 | - |
| exon-exon | CERCAM | 9 | + | CERCAM | 9 | - |
| exon-exon | ND4 | MT | - | RIPOR1 | 16 | - |
| exon-exon | TPI1P1 | 1 | - | ILF3 | 19 | - |
| exon-intron | ND1 | MT | - | RNA28SP | 21 | - |
| intron-exon | AC026471.4 | 16 | + | LOC100506730 | 1 | + |
| exon-exon | CMSS1 | 3 | - | COL8A1 | 3 | - |
| intron-exon | ZNF717 | 3 | - | LINC00960 | 3 | - |
| exon-exon | TNRC6C | 17 | + | TMC6 | 17 | + |
| exon-intron | PLXNB2 | 22 | + | LOC112268284 | 21 | - |
| exon-exon | RPS21 | 20 | - | MRAS | 3 | - |
| intron-exon | LOC105379516 | 22 | - | LOC107987323 | 22 | - |
| exon-exon | C1QTNF1 | 17 | - | MAGED4 | X | - |
| intron-exon | KAT2B | 3 | + | SGO1 | 3 | + |
| exon-exon | TMEM241 | 18 | + | TMED4 | 7 | + |
| exon-exon | LOC101927506 | 8 | + | ZKSCAN1 | 7 | - |
| exon-intron | TAF10 | 11 | - | RNA18SP5 | 21 | - |
| exon-exon | PACSIN2 | 22 | + | CEACAM5 | 19 | - |
| exon-intron | TCEAL9 | X | - | DHRS7B | 17 | - |
| exon-exon | RBM3 | X | - | NME7 | 1 | + |
| intron-exon | VN2R19P | 19 | - | DNAJC3 | 13 | - |
| intron-exon | LOC101927604 | 1 | - | C1orf198 | 1 | - |
| exon-exon | PRKAR1B | 7 | + | PEA15 | 1 | - |
| exon-intron | GRIP1 | 12 | - | HELB | 12 | - |
| exon-intron | TUBB6 | 18 | + | CYRIB | 8 | + |
| exon-exon | RPL35 | 9 | + | NOC2L | 1 | + |
| exon-exon | NGLY1 | 3 | - | ND6 | MT | + |
| exon-intron | ND5 | MT | - | EGFL7 | 9 | - |
| exon-exon | SLC1A5 | 19 | + | ATP2B2 | 3 | - |
| exon-exon | MED10 | 5 | + | SPARCL1 | 4 | - |
| exon-exon | NDUFS6 | 5 | - | GNAS | 20 | - |
| exon-exon | KANK2 | 19 | + | KANK2 | 19 | - |
| exon-exon | COX1 | MT | - | NIPA2 | 15 | - |
| exon-exon | ND4 | MT | - | EXT1 | 8 | - |
| intron-exon | MAL2-AS1 | 8 | - | SERPING1 | 11 | + |
| exon-exon | HBA1 | 16 | - | BLOC1S2 | 10 | - |
| exon-exon | TSPAN13 | 7 | - | TP53I11 | 11 | - |
| exon-exon | CYTB | MT | - | SFTPC | 8 | + |
| exon-exon | AGER | 6 | + | SFTPA2 | 10 | + |
| exon-exon | YWHAEP5 | 2 | + | LOC112268235 | 1 | + |
| exon-exon | ACVRL1 | 12 | - | ACVRL1 | 12 | + |
| exon-exon | ACTBP11 | 1 | + | RGN | X | - |
| exon-exon | C4B | 6 | - | C4A | 6 | - |
| exon-exon | ACTBP11 | 1 | + | CABIN1 | 22 | - |
| exon-exon | PRAF2 | X | + | AEBP1 | 7 | - |
| exon-exon | MBP | 18 | + | SWAP70 | 11 | - |
| exon-exon | MYO1F | 19 | + | MYO1F | 19 | - |
| exon-exon | LYZ | 12 | - | RSAD2 | 2 | - |
| exon-exon | ATP6 | MT | - | FUS | 16 | + |
| intron-exon | ZFR2 | 19 | - | SUGT1 | 13 | - |
| intron-exon | TSPAN9 | 12 | + | UQCRC1 | 3 | + |
| exon-exon | CYTOR | 2 | - | DDAH1 | 1 | + |
| exon-exon | CRYBG1 | 6 | + | RTN4IP1 | 6 | - |
| exon-exon | CYTB | MT | - | EEF1A1P12 | 2 | - |
| exon-exon | MFAP4 | 17 | + | PDIA3 | 15 | + |
| exon-exon | RPL10P16 | 19 | + | FTL | 19 | + |
| exon-exon | POFUT1 | 20 | - | COX2 | MT | + |
| exon-intron | FSCN1 | 7 | - | CYP4Z2P | 1 | + |
| exon-exon | PRDX6 | 1 | + | PRDX6 | 1 | - |
| exon-exon | NOP56 | 20 | - | NOP56P1 | 6 | - |
| exon-exon | BMPR2 | 2 | - | STK10 | 5 | - |
| exon-exon | RAB7A | 3 | - | EEF1A1 | 6 | - |
| exon-exon | COX3 | MT | - | EIF4A2 | 3 | + |
| exon-intron | CCN2 | 6 | + | KLRA1P | 12 | - |
| intron-exon | TSPOAP1-AS1 | 17 | + | SLC29A1 | 6 | + |
| exon-intron | RPL32P3 | 3 | + | IFT122 | 3 | + |
| exon-exon | ND4 | MT | - | MEF2A | 15 | + |
| exon-intron | MVB12B | 9 | - | DOCK9 | 13 | + |
| exon-exon | ZBTB7B | 1 | - | STOM | 9 | + |
| exon-exon | AEBP1 | 7 | - | WDR26 | 1 | + |
| exon-exon | ANKRD17 | 4 | + | COX3 | MT | + |
| exon-exon | PICSAR | 21 | + | GAPDH | 12 | - |
| exon-exon | S100A11 | 1 | + | CNP | 17 | - |
| exon-exon | FOXP3 | X | + | CCT6A | 7 | + |
| intron-exon | KRT86 | 12 | + | RPLP0P2 | 11 | + |
| intron-exon | RUFY2 | 10 | - | WDR1 | 4 | - |
| exon-exon | ND6 | MT | - | NOLC1 | 10 | + |
| intron-exon | SPAG17 | 1 | - | WDR12 | 2 | - |
| exon-exon | MMP2 | 16 | - | RNA45SN2 | 21 | - |
| intron-exon | MTND1P23 | 1 | - | HSPA5 | 9 | + |
| intron-exon | HIVEP2 | 6 | - | GNAI3 | 1 | - |
| intron-exon | DNAJB12 | 10 | + | OIP5-AS1 | 15 | - |
| exon-exon | ND6 | MT | - | FBXW2 | 9 | + |
| intron-exon | ST3GAL1 | 8 | + | TBC1D20 | 20 | + |
| exon-exon | GLG1 | 16 | + | NUMA1 | 11 | + |
| exon-intron | DDX47 | 12 | - | RTN4IP1 | 6 | - |
| exon-exon | SGCB | 4 | + | THBS1 | 15 | - |
| exon-exon | BCL2L2-PABPN1 | 14 | - | NASP | 1 | - |
| exon-exon | PLXND1 | 3 | + | CYBRD1 | 2 | - |
| exon-intron | CRB2 | 9 | + | DENND1A | 9 | + |
| intron-exon | ZDHHC15 | X | - | PLBD2 | 12 | - |
| exon-exon | SPARC | 5 | + | HIPK3 | 11 | - |
| exon-exon | CREB3L1 | 11 | - | COL6A3 | 2 | + |
| exon-exon | FTLP3 | 20 | - | SUMO3 | 21 | + |
| intron-exon | LOC107984355 | 11 | + | CKB | 14 | - |
| intron-exon | AC245297.3 | 1 | + | LOC653513 | 1 | + |
| exon-exon | AKAP9 | 7 | + | CYP51A1 | 7 | + |
| exon-intron | MAF1 | 8 | - | CSNK1D | 17 | - |
| exon-exon | EHD2 | 19 | - | BLOC1S6 | 15 | - |
| exon-intron | GNS | 12 | + | NCAM2 | 21 | - |
| exon-exon | MTX2 | 2 | - | MTX2 | 2 | + |
| exon-exon | NR3C2 | 4 | + | NR3C2 | 4 | - |
| exon-exon | ATP6V1G1 | 9 | - | ATP6V1G1 | 9 | + |
| exon-exon | ZNF658 | | - | ZNF658 | | + |
| exon-exon | COX6C | 8 | + | S100A11 | 1 | - |
| exon-exon | APOBEC3F | 22 | - | APOBEC3F | | + |
| exon-exon | TRIM74 | 7 | + | TRIM74 | 7 | - |
| exon-exon | ARIH2 | 3 | - | ND3 | MT | + |
| exon-exon | USP5 | 12 | - | SRSF4 | 1 | - |
| exon-exon | CLASRP | 19 | - | CLASRP | 19 | + |
| exon-exon | BRK1 | 3 | - | QSOX1 | 1 | - |
| exon-exon | TBL1XR1 | 3 | + | TBL1XR1 | 3 | - |
| exon-exon | NDUFS3 | 11 | - | NDUFS3 | 11 | + |
| intron-exon | GSAP | 7 | + | GSAP | 7 | - |
| exon-exon | MRPL3 | 3 | + | MRPL3 | 3 | - |
| exon-exon | PEX19 | 1 | + | PEX19 | 1 | - |
| intron-exon | ELF1 | 13 | + | GPD1 | 12 | + |
| intron-exon | RELL1 | 4 | - | C4orf19 | 4 | + |
| exon-exon | RAE1 | 20 | - | RAE1 | 20 | + |
| exon-exon | FAM234B | 12 | - | TALAM1 | 11 | - |
| exon-exon | C2CD2L | | - | C2CD2L | 11 | + |
| exon-exon | FAM91A1 | 8 | - | FAM91A1 | 8 | + |
| exon-exon | TM4SF1 | 3 | + | ND1 | MT | + |
| exon-intron | RPL23 | 17 | - | ZBTB44 | 11 | - |
| exon-exon | LOC729654 | | - | MTA1 | 14 | + |
| exon-exon | PSMG4 | 6 | + | DUSP22 | 6 | + |
| exon-intron | MAGEA2B | X | + | CSAG4 | X | + |
| exon-intron | CPNE1 | 20 | - | PREX1 | 20 | + |
| exon-exon | UNC93B1 | 11 | - | UNC93B5 | 11 | - |
| exon-intron | SERINC3 | 20 | - | DRG1 | 22 | - |
| exon-exon | SYNGR2 | 17 | + | GSTP1 | | + |
| exon-exon | CNIH1 | 14 | - | QARS1 | 3 | - |
| intron-exon | HIBCH | 2 | - | DHX33 | 17 | - |
| exon-intron | LOC107984273 | 10 | - | GFRA1 | 10 | - |
| exon-intron | GLE1 | 9 | + | PEX14 | 1 | - |
| exon-intron | CLPB | 11 | - | CCNH | 5 | - |
| intron-exon | AC099850.1 | 17 | + | VMP1 | 17 | + |
| exon-intron | ABCA11P | 4 | - | AC092574.2 | 4 | - |
| exon-exon | TIAL1 | 10 | - | NCLN | 19 | + |
| exon-intron | ACTR5 | 20 | + | TRIM33 | 1 | + |
| exon-exon | FEM1B | 15 | - | FEM1B | 15 | + |
| exon-exon | FH | 1 | + | FH | | - |
| exon-exon | ALG11 | 13 | - | ALG11 | 13 | + |
| exon-exon | ERCC6 | 10 | + | ERCC6 | 10 | - |
| exon-exon | ATP5F1D | 19 | - | RNA45SN1 | 21 | - |
| exon-exon | ARID1B | 6 | - | ARID1B | | + |
| exon-intron | LRRC6 | 8 | + | ZNF10 | 12 | - |
| exon-intron | ALDH3B1 | 11 | - | KIF26B | | - |
| exon-exon | SOS1 | 2 | + | SOS1 | 2 | - |
| intron-exon | CHPT1 | 12 | + | GNPTAB | 12 | - |
| exon-exon | MESD | 15 | + | MESD | 15 | - |
| exon-exon | NFKBIA | 14 | + | NFKBIA | 14 | - |
| exon-exon | PUS7L | | + | PUS7L | | - |
| intron-exon | RNR2 | MT | - | CADPS2 | 7 | - |
| intron-exon | LOC107984041 | | - | MAPK1IP1L | 14 | + |
| intron-exon | AQP4-AS1 | 18 | + | CHST9 | 18 | - |
| exon-exon | CTSS | 1 | + | STYX | 14 | - |
| exon-exon | CD82 | 11 | - | FTLP3 | 20 | - |
| intron-exon | RPL15P3 | 6 | - | MRPL9 | 1 | + |
| exon-exon | IL1RN | 2 | - | SLC35E2B | 1 | + |
| exon-exon | RPS17P16 | 22 | - | COL3A1 | 2 | + |
| exon-exon | CIAO2A | 15 | + | MRPL52 | 14 | + |
| exon-exon | SYNC | 1 | - | RBBP4 | 1 | - |
| exon-exon | PKM | 15 | - | PKM | 15 | + |
| exon-exon | DLEU2 | 13 | + | TRIM13 | 13 | + |
| exon-exon | INS-IGF2 | 11 | + | TTR | 18 | + |
| exon-exon | PGBD2 | 1 | + | RPL23AP82 | 22 | + |
| exon-exon | ST8SIA3 | 18 | - | ST8SIA3 | 18 | + |
| exon-intron | LOC101928274 | 12 | - | PBX3 | 9 | + |
| intron-exon | AC006547.1 | 22 | - | TANGO2 | 22 | - |
| exon-exon | APOBEC2 | 6 | - | STX12 | 1 | - |
| intron-exon | HMGN4 | | - | SPHK2 | 19 | - |
| exon-exon | DOCK7 | 1 | - | RPL35A | 3 | + |
| exon-exon | COX6B1 | 19 | - | B2M | 15 | - |
| exon-exon | LOC112268294 | 22 | + | NUMBL | 19 | - |
| intron-exon | VPS4A | 16 | + | COG8 | 16 | + |
| exon-exon | FRS3 | 6 | - | FRS3 | 6 | + |
| exon-intron | LATS1 | 6 | + | LRP11 | 6 | + |
| intron-exon | ST20-MTHFS | 15 | - | CIAO2A | 15 | - |
| exon-exon | TLCD5 | 11 | - | TLCD5 | 11 | + |
| intron-exon | PNISR | 6 | - | QRSL1 | 6 | + |
| exon-exon | LOC102724219 | | + | LOC107987309 | 21 | + |
| exon-intron | MDC1 | 6 | - | AHCYL1 | 1 | + |
| exon-exon | REG1A | 2 | - | REG1A | 2 | + |
| exon-exon | SERINC3 | 20 | + | SERINC3 | 20 | - |
| exon-exon | TRIO | 5 | + | TMOD1 | 9 | + |
| exon-exon | RPS6KA3 | X | - | ACTR3 | 2 | + |
| exon-exon | CSTF1 | 20 | - | CSTF1 | 20 | + |
| exon-exon | SAT1 | X | - | MPHOSPH8 | 13 | - |
| intron-exon | LINC01376 | 2 | - | LOC105373455 | | - |
| exon-intron | LIN7C | 11 | + | SLCO1A2 | 12 | - |
| exon-exon | DET1 | 15 | - | MRPL46 | | - |
| exon-exon | TALAM1 | 11 | - | MALAT1 | 11 | - |
| exon-exon | LOC114841035 | | - | ND4 | MT | - |
| exon-intron | NPIPB4 | 16 | - | NPIPB3 | 16 | - |
| exon-intron | CHN2 | | + | AC092338.3 | | - |
| exon-exon | NKX2-2 | | - | PRSS2 | | - |
| intron-exon | SLCO1A2 | 12 | - | EIF5A2 | | + |
| exon-exon | PGK1 | X | - | ND6 | MT | + |
| exon-exon | TNFRSF21 | | + | TNFRSF21 | 6 | - |
| intron-exon | ND6 | MT | - | CLDN1 | 3 | - |
| exon-exon | RPRD1A | 18 | + | RPRD1A | 18 | - |
| exon-exon | LYSMD4 | 15 | - | MEF2A | 15 | + |
| intron-exon | TP53TG1 | | + | DNAL1 | | + |
| exon-exon | TMEM125 | 1 | - | TMEM125 | 1 | + |
| exon-exon | RPL10P16 | 19 | + | SH3BP5-AS1 | 3 | + |
| exon-exon | HYOU1 | 11 | + | HYOU1 | 11 | - |
| exon-exon | CYB5D2 | 17 | - | CYB5D2 | 17 | + |
| exon-exon | TALAM1 | 11 | - | MALAT1 | 11 | + |
| exon-exon | LOC101926967 | 17 | - | LOC101926967 | | + |
| exon-exon | TRIM26 | 6 | + | TRIM26 | 6 | - |
| exon-exon | COX7B | X | - | COX7B | X | + |
| exon-exon | SLC1A5 | 19 | + | ND6 | MT | + |
| exon-exon | ZBTB7A | 19 | + | ZBTB7A | 19 | - |
| exon-exon | VEZF1 | 17 | + | VEZF1 | 17 | - |
| intron-exon | RNR2 | MT | - | PRPS2 | X | - |
| exon-exon | TRIP12 | 2 | + | TRIP12 | 2 | - |
| exon-exon | FAM210B | 20 | - | FAM210B | 20 | + |
| exon-exon | TMBIM6 | 12 | - | TMBIM6 | 12 | + |
| intron-exon | LRCH3 | 3 | + | RPL17 | 18 | - |
| exon-exon | EIF2B2 | 14 | - | EIF2B2 | 14 | + |
| exon-exon | ZNF618 | 9 | - | ZNF618 | 9 | + |
| exon-exon | FANCL | 2 | - | TSPAN12 | 7 | - |
| exon-intron | CYP51A1P2 | | + | TMEM192 | 4 | + |
| intron-exon | TRNE | MT | - | ND5 | MT | + |
| exon-exon | DCP2 | 5 | - | DCP2 | 5 | + |
| intron-exon | PHLPP1 | 18 | + | ND1 | MT | - |
| exon-exon | SST | 3 | + | NASP | 1 | - |
| intron-exon | TFRC | 3 | + | UBXN7 | 3 | + |
| intron-exon | ZNF350-AS1 | | - | ZNF350 | 19 | - |
| exon-exon | SACM1L | 3 | - | SACM1L | 3 | + |
| intron-exon | PLAT | | + | H3P6 | 2 | + |
| exon-exon | EIF5A2 | 3 | - | IAPP | 12 | + |
| intron-exon | LOC105374245 | | + | CSNK1G2 | 19 | - |
| exon-exon | RNA45SN2 | 21 | + | WASHC5 | 8 | - |
| intron-exon | INPP4B | 4 | + | GPX3 | 5 | + |
| exon-exon | HDAC5 | 17 | - | PTPN11 | 12 | + |
| exon-exon | CLTB | 5 | + | RNA45SN2 | 21 | - |
| exon-exon | NHLRC2 | 10 | + | CAVIN1 | 17 | - |
| exon-intron | FN1 | 2 | + | PDS5B | 13 | - |
| exon-intron | SMIM11B | 21 | + | OCM | 7 | + |
| exon-intron | CAMK2N1 | 1 | - | MTMR3 | 22 | - |
| exon-exon | ZNF646 | 16 | + | KRIT1 | 7 | - |
| exon-exon | GPI | 19 | + | FDPS | 1 | + |
| exon-exon | SOD2 | 6 | - | VPS41 | 7 | - |
| exon-intron | LMF1 | 16 | + | LOC105369351 | 11 | + |
| exon-exon | PDZK1 | 1 | - | MCCC2 | 5 | + |
| intron-exon | ATP5F1A | 18 | + | TLR7 | X | - |
| intron-exon | ANKDD1A | 15 | + | TALAM1 | 11 | - |
| exon-intron | PARP14 | 3 | + | AC005537.1 | 7 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-intron | CD83 | 6 | + | LOC105374940 | 6 | + |
| exon-exon | DNAH7 | 2 | - | SLC39A10 | 2 | - |
| intron-exon | AP002381.2 | 11 | + | STARD10 | 11 | - |
| intron-exon | AP005212.4 | 18 | + | PLD3 | 19 | + |
| exon-exon | TP53 | 17 | + | AGO3 | 1 | - |
| exon-exon | RNA45SN2 | 21 | + | MICOS10-NBL1 | 1 | + |
| intron-exon | COL5A2 | 2 | - | RFT1 | 3 | + |
| exon-exon | CADM4 | 19 | - | RAB11FIP2 | 10 | + |
| intron-exon | LOC100420006 | 2 | - | FAR2P4 | 2 | - |
| intron-exon | IGF1R | 15 | - | RNA45SN1 | 21 | - |
| exon-exon | RNA45SN1 | 21 | + | RPS9P4 | 19 | - |
| exon-intron | NISCH | 3 | - | NXN | 17 | + |
| intron-exon | PIGN | 18 | - | NKIRAS2 | 17 | + |
| intron-exon | MMEL1 | 1 | - | PRXL2B | 1 | + |
| exon-exon | NDE1 | 16 | + | RN7SK | 6 | - |
| intron-exon | PTPN13 | 4 | + | ZNF596 | 8 | - |
| exon-exon | PDE4C | 19 | - | LOC102725254 | 19 | - |
| exon-exon | RAB34 | 17 | - | EFCAB14 | 1 | - |
| intron-exon | MBD5 | 2 | - | DST | 6 | + |
| exon-exon | PLA2G2A | 1 | + | AFDN | 6 | - |
| intron-exon | ZNF93 | 19 | - | COX6A1 | 12 | + |
| exon-intron | TMSB4X | X | - | SKI | 1 | - |
| intron-exon | SIDT1 | 3 | - | HBS1L | 6 | + |
| exon-exon | GNS | 12 | - | PSPC1 | 13 | - |
| exon-intron | RNA45SN1 | 21 | - | LOC101448202 | 9 | - |
| exon-intron | SLU7 | 5 | + | NT5C2 | 10 | + |
| exon-exon | ELOVL5 | 6 | - | GCM1 | 6 | - |
| exon-exon | NOL3 | 16 | - | NOL3 | 16 | + |
| exon-intron | HNRNPA1L2 | 13 | - | MRPS31P4 | 13 | - |
| exon-exon | UBXN11 | 1 | + | CDS2 | 20 | - |
| exon-intron | CIAO1 | 2 | - | KLF17 | 1 | - |
| intron-exon | GYS1 | 19 | - | RASGRP3 | 2 | + |
| intron-exon | RNA28SP | 21 | + | ILF3 | 19 | + |
| exon-exon | SULF1 | 8 | + | RPS17 | 15 | - |
| intron-exon | KDELR2 | 7 | - | SNAP23 | 15 | + |
| exon-exon | RNA45SN1 | 21 | + | PTGER4 | 5 | + |
| intron-exon | EPC1 | 10 | + | BMPR2 | 2 | - |
| exon-exon | RNA45SN3 | 21 | + | PODN | 1 | + |
| exon-intron | AKAP1 | 17 | + | IGH | 14 | - |
| exon-intron | RPL7P9 | 1 | + | DYRK2 | 12 | - |
| exon-exon | NEAT1 | 11 | + | IGLL5 | 22 | + |
| exon-exon | RNA45SN3 | 21 | + | GPI | 19 | + |
| exon-exon | ERO1B | 1 | - | GPR137B | 1 | - |
| exon-exon | PLAAT1 | 3 | + | ATP13A5-AS1 | 3 | + |
| intron-exon | KLRG1 | 12 | + | A2M | 12 | - |
| exon-exon | RNA45SN3 | 21 | - | MBNL2 | 13 | - |
| intron-exon | LOC105371251 | 16 | - | ATP5MC1 | 17 | + |
| exon-exon | SCAMP4 | 19 | + | C7orf26 | 7 | + |
| intron-exon | RP11-499F3.2 | 15 | - | LOC102723985 | 15 | - |
| intron-exon | CTD-2015H3.2 | | + | LOC105371959 | | + |
| exon-exon | LINC02320 | 14 | - | LOC107984698 | 14 | - |
| intron-exon | SNHG16 | 17 | + | RTF2 | 20 | + |
| exon-exon | SNAP23 | 15 | + | SENP3-EIF4A1 | 17 | + |
| exon-exon | RN7SK | 6 | + | XRCC6 | 22 | + |
| intron-exon | LOC105370449 | 14 | - | TAF1A-AS1 | | + |
| intron-exon | KIF1B | 1 | + | STMN1 | 1 | - |
| exon-intron | ACTR8 | 3 | - | NDUFC2-KCTD14 | 11 | - |
| intron-exon | SCN2A | 2 | - | DEDD | 1 | - |
| exon-exon | ENC1 | 5 | - | GNAS | 20 | + |
| exon-exon | PRR14L | 22 | - | YWHAH | 22 | + |
| exon-exon | IFITM3 | 11 | + | RACK1 | 5 | - |
| exon-exon | FOSL1 | 11 | - | GIT1 | 17 | - |
| exon-exon | RPS5 | 19 | - | BPGM | 7 | + |
| exon-exon | SUB1 | 5 | + | PDHA1 | X | + |
| exon-exon | CCT3 | 1 | - | RAC1 | 7 | + |
| exon-exon | PTMA | 2 | - | HS1BP3 | 2 | - |
| exon-exon | TUBA1C | 12 | - | EIF5A | 17 | + |
| exon-exon | BCAS2 | | - | LOC105378913 | | - |
| exon-exon | EZH2 | 7 | + | STAP2 | 19 | - |
| intron-exon | LOC105375434 | 7 | + | PMPCB | 7 | + |
| exon-exon | SCARB1 | 12 | - | UBC | 12 | - |
| exon-exon | PLOD3 | 7 | + | MPV17 | 2 | - |
| exon-exon | EEF1A1P5 | 9 | - | EEF1A1 | 6 | - |
| exon-exon | DDX18 | 2 | + | RPS27 | 1 | + |
| exon-exon | TTF2 | 1 | - | BRD9 | 5 | - |
| exon-exon | UBB | 17 | - | SORD | 15 | + |
| intron-exon | COLEC10 | 8 | - | HACD3 | 15 | + |
| intron-exon | SNHG6 | 8 | - | NDUFV1 | 11 | + |
| exon-exon | MGAT5 | 2 | + | TRIM28 | 19 | + |
| exon-exon | LAMB1 | 7 | - | KPNA3 | 13 | - |
| exon-exon | BDP1 | 5 | + | KDM5A | 12 | - |
| exon-exon | CASKIN1 | 16 | - | SENP3-EIF4A1 | 17 | + |
| exon-exon | PKM | 15 | + | ACTB | 7 | - |
| exon-exon | TUBA1B | 12 | + | FTL | 19 | + |
| exon-intron | STX4 | 16 | - | KRT7 | 12 | + |
| exon-exon | ZNF692 | 1 | + | RPL7AP6 | | - |
| intron-exon | SMIM29 | 6 | + | RPL35P2 | 6 | + |
| exon-exon | ITGA3 | 17 | - | LAMB3 | 1 | - |
| intron-exon | CLK2 | 1 | - | TPT1 | 13 | - |
| exon-exon | ZFAND6 | 15 | + | PSMB1 | 6 | - |
| exon-exon | GLG1 | 16 | + | GLG1 | 16 | - |
| exon-exon | SLC7A6OS | 16 | + | SLC7A6OS | 16 | - |
| exon-exon | RNVU1-18 | 1 | - | PGD | 1 | + |
| intron-exon | TUBD1 | 17 | - | NDUFB8 | 10 | - |
| exon-exon | PGK1 | X | - | PGK1 | X | + |
| exon-exon | RPS28 | 19 | - | SPCS2P4 | | - |
| exon-exon | PIK3C3 | 18 | - | OLA1P1 | 22 | - |
| exon-exon | TMSB15B | X | + | INSIG1 | 7 | + |
| exon-intron | MAP7D3 | X | - | FP236383.3 | 21 | - |
| exon-exon | SNORD3A | 17 | + | EEF1A1P6 | 7 | - |
| intron-exon | RPS4XP2 | | + | PRNP | 20 | + |
| exon-exon | AJM1 | 9 | + | PHPT1 | 9 | + |
| exon-exon | AP3D1 | 19 | - | TOP2B | 3 | - |
| intron-exon | HAUS6 | 9 | - | SLC39A8 | 4 | - |
| exon-intron | TNFRSF10A | 8 | - | TNFRSF10A-AS1 | 8 | - |
| exon-exon | ENY2 | 8 | + | TSSK3 | 1 | - |
| exon-intron | RPL7A | 9 | - | SMOC1 | 14 | - |
| intron-exon | LOC105370449 | 14 | - | VIM | 10 | + |
| exon-exon | YWHAE | 17 | + | MAPKAPK5 | 12 | + |
| exon-exon | ANXA1 | 9 | - | ACTG1 | 17 | - |
| exon-exon | CELF1 | 11 | + | TMSB4XP8 | 4 | - |
| exon-intron | METTL16 | 17 | - | UBXN2A | 2 | - |
| exon-exon | ANXA1 | 9 | + | U2SURP | 3 | + |
| exon-exon | KATNBL1 | 15 | - | RPS6 | 9 | - |
| exon-exon | MRPL42 | 12 | - | SERF2-C15ORF63 | 15 | + |
| exon-exon | CMIP | 16 | - | TPT1 | 13 | - |
| exon-exon | CDK6 | 7 | + | ZNF791 | 19 | + |
| exon-exon | ZNF33B | | + | AMOTL2 | | - |
| exon-exon | LOC105378663 | 1 | + | LOC105378662 | 1 | + |
| exon-exon | RPL7A | 9 | - | ANXA1 | 9 | + |
| exon-exon | MALAT1 | 11 | + | HSP90AA1 | 14 | - |
| exon-exon | UQCRH | 1 | - | RPS15A | 16 | - |
| exon-exon | EIF3A | 10 | + | FAU | 11 | - |
| exon-exon | CPSF3 | 2 | - | CPSF3 | 2 | + |
| exon-exon | SSB | 2 | - | SSB | 2 | + |
| intron-exon | DIPK1A | 1 | - | DCXR | 17 | - |
| exon-exon | RPL6P27 | 18 | + | RPL6P19 | | + |
| intron-exon | LOC105371442 | | - | S100A10 | 1 | - |
| intron-exon | LRIG1 | 3 | - | PRODH | 22 | - |
| exon-exon | GAPDH | 12 | - | LDHA | 11 | + |
| exon-exon | SERPINA1 | 14 | + | RPL23 | 17 | - |
| exon-exon | TUFT1 | 1 | + | RNF115 | 1 | - |
| exon-exon | HMGB1 | 13 | - | RPL3 | 22 | - |
| exon-exon | TMEM263 | 12 | + | RPL15 | 3 | + |
| exon-exon | SPDL1 | 5 | + | CDKL2 | 4 | - |
| exon-intron | PTEN | | + | DCXR | 17 | - |
| exon-exon | TRABD2A | 2 | + | TRABD2A | 2 | - |
| exon-exon | RNU6-3P | X | - | PSMD1 | 2 | + |
| intron-exon | LEPR | 1 | + | LEPROT | 1 | + |
| exon-exon | KTN1 | 14 | + | SCD | 10 | + |
| exon-exon | SERBP1 | 1 | - | SPARC | 5 | - |
| exon-intron | ICE2P1 | | - | HCCS | | + |
| exon-exon | NCL | 2 | - | KRT18 | 12 | + |
| exon-exon | CHEK1 | 11 | + | PEX19 | 1 | - |
| exon-exon | ANLN | 7 | + | RPL19 | 17 | + |
| exon-exon | FTL | 19 | - | FTL | 19 | + |
| intron-exon | DGKI | 7 | + | LDHA | 11 | + |
| intron-exon | RPL36P14 | | - | VMP1 | 17 | + |
| intron-exon | DTWD2 | 5 | - | WBP2 | 17 | - |
| exon-exon | LDHA | 11 | - | ATP5MC3 | 2 | - |
| exon-exon | EEF1A1P6 | 7 | + | EEF1A1P5 | 9 | + |
| intron-exon | AC021660.3 | | - | GPR15 | | - |
| exon-exon | MALAT1 | 11 | + | OST4 | 2 | - |
| intron-exon | ZYG11B | 1 | + | VIM | 10 | + |
| exon-exon | RCC1 | 1 | + | PARL | 3 | - |
| exon-exon | HAPLN1 | 5 | + | RPS27A | 2 | + |
| intron-exon | GRM7 | | + | DDX3X | X | - |
| exon-exon | KDM5A | 12 | + | TUBB4A | 19 | - |
| exon-exon | RPSAP58 | 19 | - | RPSA | 3 | + |
| intron-exon | APOO | X | + | CKB | 14 | - |
| exon-exon | GAPDH | 12 | - | SERPINA1 | 14 | - |
| exon-intron | RNU6-3P | X | - | SETDB1 | 1 | + |
| exon-exon | KRT8 | 12 | + | PSMB5 | 14 | - |
| exon-exon | ZNF326 | 1 | - | UBA1 | X | + |
| exon-exon | ATP6V0A1 | 17 | + | IER3 | 6 | - |
| exon-exon | MALAT1 | 11 | + | DBN1 | 5 | - |
| exon-exon | HMGCL | 1 | - | GALE | | - |
| exon-intron | RNF2 | | + | LOC105379273 | | + |
| exon-exon | RBL2 | 16 | + | LCORL | 4 | - |
| exon-exon | HP1BP3 | 1 | - | HSPA5 | 9 | - |
| exon-exon | CFL1 | 11 | - | MTPN | 7 | - |
| exon-exon | CCZ1 | 7 | + | EIF3L | 22 | + |
| exon-exon | SEPTIN2 | 2 | + | TUBB | 6 | + |
| exon-intron | NAP1L1 | 12 | - | RPL13AP25 | 13 | - |
| exon-exon | LSM6 | | + | IFIT3 | 10 | + |
| intron-exon | NLGN1 | 3 | + | KCNC3 | 19 | - |
| exon-exon | MIR99AHG | 21 | + | KLHL7 | 7 | + |
| exon-exon | NIBAN1 | 1 | - | RPL10 | X | + |
| exon-intron | RNU6-3P | X | - | EVL | 14 | + |
| exon-exon | OAZ1 | 19 | + | FKBP8 | 19 | - |
| intron-exon | RPS6KC1 | | + | EEF1A1 | 6 | - |
| exon-exon | PTGDS | 9 | + | HIP1R | 12 | + |
| exon-intron | DGAT2 | 11 | - | DOCK4 | 7 | - |
| exon-exon | CPT1A | 11 | + | FGG | 4 | - |
| intron-exon | IPO11 | 5 | + | SAP30BP | 17 | + |
| exon-exon | PSMB2 | 1 | + | SLC25A35 | 17 | - |
| exon-exon | CACNB3 | 12 | - | CACNB3 | 12 | + |
| exon-exon | RNU6-13P | | + | PI4KA | 22 | - |
| exon-exon | RNU6-2 | 19 | + | CELF4 | 18 | - |
| exon-exon | CLASP1 | 2 | - | STUM | 1 | + |
| exon-exon | RPL13A | 19 | - | RPL13A | 19 | + |
| exon-exon | WDR75 | 2 | + | RNF212 | 4 | - |
| exon-exon | RPS11 | 19 | - | PEBP1 | 12 | + |
| exon-exon | SDHB | 1 | + | SDHB | 1 | - |
| exon-exon | ANPEP | 15 | + | ANPEP | 15 | - |
| intron-exon | LOC105373975 | 2 | - | SNRPB | 20 | - |
| intron-exon | SLC27A4 | 9 | - | CDCA4 | 14 | - |
| exon-exon | RSRC2 | 12 | + | RSRC2 | 12 | - |
| exon-exon | MAP2K2 | 19 | + | CSDE1 | 1 | - |
| exon-exon | MTA2 | 11 | + | MTA2 | 11 | - |
| exon-exon | TCHP | 12 | - | TCHP | 12 | + |
| intron-exon | RPL13AP5 | 10 | - | KLF6 | 10 | - |
| exon-exon | VDAC2 | | - | VDAC2P5 | | + |
| exon-intron | RCC1 | 1 | + | NFYC | 1 | + |
| exon-exon | PKM | 15 | + | PKM | 15 | - |
| exon-exon | ZYX | 7 | - | ZYX | 7 | + |
| exon-exon | LAMTOR5 | 1 | + | LAMTOR5 | 1 | - |
| exon-exon | EIF3F | 11 | - | EIF3F | 11 | + |
| exon-exon | PFDN1 | 5 | + | PFDN1 | 5 | - |
| intron-exon | ADA2 | 22 | + | MRPS2 | 9 | - |
| exon-exon | NQO1 | 16 | + | NQO1 | 16 | - |
| intron-exon | FAM32A | | - | EPB41L2 | 6 | + |
| intron-exon | LOC100507071 | | + | POLR3D | | + |
| exon-exon | RPL10P16 | 19 | + | COPS7A | 12 | + |
| exon-exon | AKR7L | 1 | - | CD55 | 1 | - |
| intron-exon | DIPK1A | 1 | - | TMEM245 | 9 | - |
| exon-exon | CD99 | Y | - | LGALS3BP | 17 | - |
| intron-exon | LOC643634 | | - | S100A11 | 1 | - |
| exon-exon | DDX21 | 10 | - | DDX21 | 10 | + |
| exon-exon | ALPK1 | | + | LOC107986304 | | + |
| exon-exon | CEMIP2 | 9 | - | NRDC | 1 | - |
| intron-exon | EMC1-AS1 | 1 | + | EMC1 | 1 | - |
| intron-exon | CD1B | 1 | + | CD1C | 1 | + |
| exon-exon | TMEM14C | 6 | - | TMEM14C | 6 | + |
| exon-exon | BAAT | | + | BAAT | | - |
| intron-exon | TXNL4B | 16 | - | SLC4A2 | 7 | + |
| exon-exon | ESRP2 | 16 | - | NDUFA1 | X | + |
| exon-exon | A1BG | 19 | + | A1BG | 19 | - |
| exon-exon | ACSM2B | 16 | + | CYP3A4 | 7 | - |
| intron-exon | DBT | 1 | - | ADH4 | 4 | - |
| exon-intron | CCAR1 | 10 | + | ONECUT1 | 15 | - |
| exon-exon | APLP2 | 11 | + | SERPING1 | 11 | + |
| exon-exon | ASGR2 | 17 | + | ASGR2 | 17 | - |
| exon-exon | DDIT4 | 10 | - | DDIT4 | 10 | + |
| exon-exon | AP1M2 | 19 | + | AP1M2 | 19 | - |
| exon-exon | PTMA | 2 | - | RPL32 | 3 | - |
| exon-exon | RPL36AP28 | 7 | + | ATP5PO | 21 | - |
| intron-exon | NELFA | | - | UBAP1 | 9 | + |
| exon-intron | MMACHC | 1 | + | CRLS1 | 20 | - |
| exon-exon | ARHGDIA | 17 | + | ARHGDIA | 17 | - |
| exon-exon | ETFA | 15 | + | ETFA | 15 | - |
| exon-exon | AR | X | - | MRPL16 | 11 | - |
| exon-intron | SRSF1 | 17 | - | RNASE4 | | + |
| exon-exon | FABP1 | 2 | + | FABP1 | 2 | - |
| exon-exon | C3 | 19 | + | FURIN | 15 | + |
| exon-intron | RAB27A | 15 | + | RAB27A | 15 | - |
| intron-exon | AGTRAP | 1 | - | ERP44 | 9 | - |
| intron-exon | GTF2H2 | 5 | + | BDP1 | | + |
| exon-intron | HPD | 12 | + | FKBP1A-SDCBP2 | 20 | - |
| exon-exon | HADH | 4 | - | HADH | 4 | + |
| exon-exon | VTN | 17 | + | VTN | 17 | - |
| exon-exon | TTC38 | | - | TTC38 | | + |
| exon-exon | LY6E | 8 | - | PRAP1 | 10 | + |
| exon-exon | STAU1 | 20 | + | CALM1 | 14 | + |
| intron-exon | MRPL23 | 11 | + | H19 | 11 | - |
| exon-exon | APCS | 1 | - | APCS | 1 | + |
| exon-exon | VTN | 17 | + | TFIP11 | 22 | - |
| exon-exon | ACSM2A | | - | ACSM2A | | + |
| intron-exon | CYB5A | 18 | - | DNASE1L1 | X | - |
| exon-exon | MPST | 22 | - | WAS | X | + |
| exon-exon | AIFM2 | 10 | + | AIFM2 | 10 | - |
| exon-exon | ARMC6 | 19 | - | ARMC6 | 19 | + |
| exon-intron | LOC105372317 | | - | ZNF826P | | - |
| intron-exon | ZNF235 | 19 | - | ZNF227 | 19 | - |
| exon-exon | ECT2 | 3 | + | LRRC39 | 1 | - |
| exon-exon | RBSN | 3 | - | TLCD5 | 11 | + |
| exon-exon | PSMD2 | 3 | + | RPS23 | 5 | - |
| exon-exon | CTTN | 11 | + | LASP1 | 17 | + |
| exon-intron | RPS6 | 9 | + | RPS6 | 9 | - |
| intron-exon | CTC-455F18.1 | 5 | - | LOC107986473 | 5 | - |
| intron-exon | PNKD | 2 | + | PAPSS1 | 4 | - |
| exon-exon | LOC107987172 | 12 | - | LOC728715 | 12 | - |
| exon-exon | PCNP | 3 | + | RNA45SN2 | 21 | - |
| exon-exon | DAZAP2 | 12 | + | TCF4 | 18 | + |
| exon-exon | NCAPH2 | 22 | - | USP39 | 2 | + |
| intron-exon | RPS23P8 | X | - | TUBGCP5 | 15 | - |
| exon-exon | CXCL14 | 5 | + | DCAF16 | 4 | + |
| exon-exon | DCAF16 | 4 | - | CXCL14 | 5 | - |
| exon-exon | AASS | 7 | + | AASS | 7 | - |
| exon-intron | RNA45SN1 | 21 | + | TCTE3 | 6 | + |
| exon-intron | TERF2IP | 16 | - | RNA45SN2 | 21 | - |
| exon-exon | GPR161 | 1 | + | ZNF462 | 9 | - |
| intron-exon | PPP2R2A | 8 | + | DPYSL2 | 8 | + |
| exon-intron | TFDP2 | 3 | + | CDC42BPA | 1 | - |
| exon-exon | SLC25A5 | X | - | RNA45SN2 | 21 | - |
| exon-exon | CD34 | 1 | - | GIMAP4 | 7 | + |
| exon-exon | SF3B1 | 2 | - | UQCC3 | 11 | + |
| exon-exon | RNA45SN2 | 21 | + | ACTG1 | 17 | - |
| exon-exon | TUBB | 6 | - | TUBB | 6 | + |
| exon-exon | ILF3 | 19 | + | C17orf80 | 17 | + |
| exon-exon | RNA45SN1 | 21 | + | EEF1A1P9 | 4 | + |
| exon-exon | HNRNPA2B1 | 7 | - | INS-IGF2 | 11 | - |
| exon-exon | PIR-FIGF | X | + | PIR-FIGF | X | - |
| exon-intron | MCM7 | 7 | + | FRMD4A | 10 | - |
| exon-exon | TP53INP2 | 20 | - | TP53INP2 | 20 | + |
| exon-exon | ANKRD19P | 9 | + | ZNF484 | 9 | + |
| exon-exon | NR3C1 | 5 | + | NR3C1 | 5 | - |
| exon-exon | RNA45SN2 | 21 | + | POLR1D | 13 | + |
| exon-exon | RANBP10 | 16 | + | SMG1P5 | 16 | - |
| exon-exon | VPS72 | 1 | + | VPS72 | 1 | - |
| exon-exon | ACTB | 7 | - | ACTB | 7 | + |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN3 | 21 | - |
| exon-intron | RNA45SN2 | 21 | - | RNR1 | MT | - |
| exon-intron | RNA45SN1 | 21 | - | RNA28SP | 21 | - |
| exon-intron | RNA45SN2 | 21 | + | RNA18SP5 | 21 | + |
| exon-exon | RNA45SN1 | 21 | - | RNA45SN3 | 21 | - |
| exon-exon | RNA45SN3 | 21 | - | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN3 | 21 | - | LOC112268284 | 21 | - |
| intron-exon | RNA28SP | 21 | - | RNA45SN2 | 21 | + |
| exon-intron | LOC105378179 | 14 | - | RNR1 | MT | + |
| exon-intron | RNA45SN3 | 21 | + | RNU1-27P | | - |
| exon-exon | RNA45SN2 | 21 | - | SAT1 | X | - |
| intron-exon | CCSER1 | 4 | + | TMSB4X | X | - |
| exon-exon | TMSB4X | X | - | SAT1 | X | - |
| exon-exon | RACK1 | 5 | + | TMSB4X | X | - |
| intron-exon | NBPF22P | | - | TMSB4X | X | + |
| exon-exon | CTSB | 8 | - | LOC112268284 | 21 | - |
| exon-exon | TMSB4X | X | - | CTSB | 8 | - |
| exon-exon | CTSB | 8 | - | TMSB4X | X | - |
| exon-exon | RNA45SN3 | 21 | + | TMSB4X | X | + |
| exon-exon | RNA45SN3 | 21 | - | HLA-DRA | 6 | - |
| exon-exon | RPS17 | 15 | - | PTPN7 | 1 | + |
| exon-exon | ANKRD36B | 2 | + | ANKRD36C | 2 | - |
| exon-exon | SDHB | 1 | + | SDHB | 1 | - |
| intron-exon | CSF1R | 5 | - | RPL7P15 | | - |
| exon-exon | BCL6 | 3 | + | BCL6 | 3 | - |
| exon-exon | MAP3K8 | 10 | - | MAP3K8 | 10 | + |
| exon-exon | ATP2A2 | 12 | - | ATP2A2 | 12 | + |
| exon-exon | RPL30 | 8 | + | RPL30 | 8 | - |
| exon-exon | SGPP2 | 2 | - | SGPP2 | 2 | + |
| exon-exon | S100A2 | 1 | + | ND3 | MT | + |
| exon-exon | CMIP | 16 | - | SSBP1 | 7 | + |
| exon-intron | LYRM2 | 6 | + | MTND1P23 | 1 | + |
| exon-exon | EIF4E | 4 | + | EIF4E | 4 | - |
| intron-exon | LOC107985034 | 17 | + | JPT1 | 17 | - |
| exon-exon | UQCRB | 8 | + | ND4 | MT | + |
| exon-exon | NARS1 | 18 | + | ATP6 | MT | + |
| exon-exon | LAMP2 | X | + | LAMP2 | X | - |
| exon-exon | TOPORS | 9 | + | TOPORS | 9 | - |
| exon-exon | RDX | | + | RDX | 11 | - |
| exon-exon | EIF1AY | Y | - | EIF1AY | Y | + |
| exon-exon | TEKT1 | | + | TEKT1 | | - |
| exon-exon | IER3IP1 | 18 | + | ATP8B1 | 18 | + |
| exon-exon | RAB31 | 18 | - | RAB31 | 18 | + |
| exon-exon | CCT6A | 7 | - | CCT6A | 7 | + |
| exon-intron | ND6 | MT | - | SAMD4A | 14 | + |
| exon-exon | FAM210B | 20 | - | FAM210B | 20 | + |
| intron-exon | SMC5-AS1 | 9 | - | MAMDC2 | 9 | + |
| exon-exon | MAEA | 4 | - | MAEA | 4 | + |
| exon-exon | TMEM127 | 2 | - | UPK1B | 3 | + |
| exon-intron | SNAPC5 | 15 | + | RNR2 | MT | + |
| exon-exon | NFKBIA | 14 | + | NFKBIA | 14 | - |
| exon-exon | EXOSC7 | 3 | - | EXOSC7 | 3 | + |
| exon-intron | NDUFB5 | 3 | - | CTBP1-DT | | + |
| intron-exon | ADNP-AS1 | 20 | + | DPM1 | 20 | - |
| exon-intron | TGS1 | 8 | - | SNTG2 | 2 | - |
| exon-exon | KCMF1 | 2 | - | KCMF1 | 2 | + |
| exon-exon | ATP2A2 | 12 | - | ATP2A2 | 12 | + |
| exon-exon | MAOA | X | - | MAOA | X | + |
| intron-exon | LINC00886 | | + | PA2G4 | 12 | + |
| exon-exon | HNRNPUL2-BSCL2 | 11 | + | ADM | 11 | + |
| exon-exon | GNG5 | 1 | + | NEAT1 | 11 | + |
| exon-exon | WDR78 | 1 | + | WDR78 | 1 | - |
| intron-exon | AC096540.1 | | - | FOXJ3 | 1 | - |
| exon-exon | CHD2 | 15 | - | CHD2 | 15 | + |
| exon-exon | ARPC2 | 2 | - | ARPC2 | 2 | + |
| exon-intron | NBPF3 | | - | NBPF2P | | - |
| intron-exon | LACTB2-AS1 | 8 | + | LACTB2 | 8 | - |
| exon-exon | NOLC1 | 10 | - | NOLC1 | 10 | + |
| exon-exon | TSPAN3 | 15 | + | TSPAN3 | 15 | - |
| intron-exon | TTTY14 | Y | + | CD24 | 6 | - |
| exon-exon | CEP43 | 6 | - | ATP6 | MT | + |
| exon-exon | PPP4R2 | 3 | - | PPP4R2 | 3 | + |
| exon-exon | SYK | 9 | - | SYK | 9 | + |
| exon-exon | GLIS3 | 9 | + | GLIS3 | 9 | - |
| intron-exon | ND6 | MT | - | SLC25A24 | | - |
| exon-exon | CTSL | 9 | - | CTSL | 9 | + |
| exon-exon | FN1 | 2 | + | FN1 | 2 | - |
| exon-intron | FAM133DP | 2 | + | ZSWIM6 | 5 | + |
| exon-exon | AP3B1 | 5 | + | AP3B1 | 5 | - |
| exon-exon | CANX | 5 | - | CANX | 5 | + |
| exon-exon | NPC2 | 14 | + | ND6 | MT | + |
| exon-exon | OPTN | 10 | - | OPTN | 10 | + |
| exon-exon | ZNF286A | 17 | - | ZNF286A | | + |
| exon-exon | UBXN4 | 2 | - | UBXN4 | 2 | + |
| intron-exon | HIVEP2 | 6 | - | RBM47 | 4 | - |
| exon-exon | RAB11A | 15 | - | RAB11A | 15 | + |
| exon-exon | RHOT1 | 17 | - | RHOT1 | 17 | + |
| intron-exon | EFCAB14-AS1 | 1 | + | EFCAB14 | 1 | - |
| exon-exon | COMMD6 | 13 | + | COMMD6 | 13 | - |
| intron-exon | ND6 | MT | - | TNKS2 | 10 | - |
| exon-exon | YWHAB | 20 | - | YWHAB | 20 | + |
| exon-exon | BBX | 3 | - | BBX | 3 | + |
| exon-exon | SLBP | 4 | + | SLBP | 4 | - |
| exon-exon | DDHD2 | 8 | - | DDHD2 | 8 | + |
| exon-exon | NDUFAF6 | 8 | - | NDUFAF6 | | + |
| exon-exon | PBX2 | 6 | + | RAN | 12 | + |
| exon-intron | TLCD2 | 17 | + | RPL10P16 | 19 | - |
| exon-exon | RMDN2 | 2 | + | CYP1B1 | 2 | - |
| intron-exon | ATP5MF-PTCD1 | 7 | - | UBE2G2 | | - |
| exon-exon | PUM1 | 1 | + | PUM1 | 1 | - |
| exon-exon | CCSAP | 1 | - | RAB4A | 1 | - |
| exon-exon | RPL21P93 | | + | RPL21P93 | | - |
| intron-exon | LOC107985360 | 1 | + | EGLN1 | 1 | - |
| exon-intron | LINC02345 | 15 | - | TMCO5A | 15 | - |
| exon-exon | TWF1 | 12 | + | TWF1 | | - |
| exon-exon | NDUFAF2 | | - | NDUFAF2 | 5 | + |
| exon-exon | ARMCX5-GPRASP2 | X | - | ARMCX5-GPRASP2 | X | + |
| exon-exon | TMEM39A | | + | ND2 | MT | + |
| exon-exon | PSME3IP1 | 16 | + | PSME3IP1 | 16 | - |
| exon-exon | SPATA17 | 1 | - | SPATA17 | 1 | + |
| exon-exon | CCT4 | 2 | + | CCT4 | 2 | - |
| exon-exon | KIN | 10 | + | KIN | 10 | - |
| exon-exon | USP47 | 11 | - | LOC100131747 | 1 | - |
| exon-exon | EIF5B | 2 | - | CCDC113 | 16 | + |
| intron-exon | THSD4 | 15 | + | KIF21A | 12 | + |
| intron-exon | GGA3 | 17 | - | NUP85 | 17 | + |
| exon-exon | VPS29 | 12 | + | VPS29 | 12 | - |
| exon-exon | FBXO32 | 8 | + | ATP6 | MT | + |
| exon-exon | NUCB2 | 11 | - | ND2 | MT | + |
| exon-exon | ARPC1B | 7 | - | ARPC1B | 7 | + |
| intron-exon | MTATP6P1 | 1 | - | PIM3 | | + |
| exon-exon | MTX3 | 5 | + | MTX3 | 5 | - |
| exon-exon | CCDC80 | 3 | + | ND3 | MT | + |
| exon-exon | RNF7 | 3 | - | RNF7 | 3 | + |
| exon-exon | SEL1L3 | 4 | + | ND4 | MT | + |
| exon-exon | PIM3 | 22 | - | PIM3 | | + |
| exon-exon | DDX17 | 22 | + | DDX17 | 22 | - |
| exon-exon | TRIM2 | 4 | - | TRIM2 | 4 | + |
| exon-exon | IPO9 | 1 | - | IPO9 | 1 | + |
| intron-exon | CIR1 | 2 | + | ARPP19 | 15 | + |
| exon-exon | FUNDC1 | | + | FUNDC1 | | - |
| exon-exon | CIAO2B | 16 | + | CIAO2B | 16 | - |
| exon-exon | CELF1 | 11 | + | CELF1 | 11 | - |
| exon-exon | TMEM167A | 5 | + | TMEM167A | 5 | - |
| exon-exon | ND6 | MT | - | HNRNPD | 4 | - |
| exon-exon | ST3GAL1 | 8 | + | ST3GAL1 | 8 | - |
| exon-exon | SRSF2 | 17 | + | SRSF2 | 17 | - |
| exon-exon | SYNPO | 5 | + | TRIOBP | 22 | + |
| intron-exon | SRGAP2C | 1 | + | CYRIA | 2 | - |
| exon-exon | VASN | 16 | + | AFDN-DT | 6 | - |
| exon-exon | RPS3AP6 | 15 | + | COX3 | MT | + |
| intron-exon | LINC02345 | 15 | - | TMCO5A | 15 | - |
| intron-exon | LPGAT1 | 1 | - | SIX1 | 14 | - |
| exon-exon | COX1 | MT | + | EHBP1L1 | 11 | + |
| exon-exon | LOC100506023 | 1 | - | TNFSF4 | 1 | - |
| exon-intron | PSIP1 | 9 | - | MAP3K7CL | 21 | - |
| exon-intron | GPRC5A | 12 | + | LOC101929372 | 22 | - |
| exon-intron | CD82 | 11 | + | MMADHC-DT | 2 | + |
| exon-exon | ATM | 11 | + | ASPH | 8 | - |
| exon-intron | COL1A2-AS1 | 7 | - | LOC112267858 | 7 | - |
| exon-intron | SIGMAR1 | 9 | + | PNPLA6 | 19 | - |
| intron-exon | LOC102723704 | 4 | + | UBE2D3 | 4 | - |
| intron-exon | CAMK1D | 10 | + | NMT1 | 17 | + |
| intron-exon | PLPP1 | 5 | - | CACYBP | 1 | + |
| exon-exon | LINCADL | 5 | + | FAF1 | 1 | - |
| exon-exon | STAG3L5P-PVRIG2P-PILRB | 7 | + | PILRA | 7 | + |
| intron-exon | CAMKMT | 2 | - | RPS2 | 16 | - |
| exon-exon | LOC107985263 | 1 | - | SMYD2 | 1 | - |
| exon-intron | CTSB | 8 | + | CAPZB | 1 | + |
| intron-exon | SFMBT1 | 3 | + | TMEM184C | 4 | - |
| exon-exon | FAM53C | 5 | - | FAM53C | 5 | + |
| exon-exon | CBX6 | 22 | + | CBX6 | 22 | - |
| exon-intron | MRPL9 | 1 | - | AL589765.7 | | - |
| intron-exon | NDUFA4P1 | 1 | - | NDUFA4 | 7 | - |
| exon-exon | ALCAM | 3 | - | ND6 | MT | + |
| exon-exon | CYP4B1 | 1 | - | ND6 | MT | + |
| exon-exon | ETNK1 | 12 | - | ETNK1 | 12 | + |
| exon-exon | CLPX | | + | CLPX | | - |
| exon-exon | IDS | X | + | IDS | X | - |
| exon-exon | BMP2 | 20 | - | BMP2 | 20 | + |
| exon-exon | HSPA9 | 5 | + | ISL1 | | - |
| exon-exon | USP10 | 16 | - | USP10 | 16 | + |
| exon-exon | DCAKD | 17 | - | DCAKD | | + |
| exon-exon | WBP1L | 10 | - | WBP1L | 10 | + |
| intron-exon | ZDHHC5 | | + | COPA | 1 | - |
| exon-exon | LIMS1 | 2 | - | LIMS1 | 2 | + |
| exon-exon | MTIF2 | 2 | + | GLUL | 1 | + |
| exon-exon | ZKSCAN8 | 6 | - | ZKSCAN8 | 6 | + |
| exon-exon | SF3B6 | 2 | + | SF3B6 | 2 | - |
| exon-intron | EEF2 | 19 | - | RBL1 | 20 | - |
| exon-intron | GAB2 | 11 | - | CLNS1A | 11 | + |
| exon-exon | ACTG1 | 17 | + | ACTG1 | 17 | - |
| exon-exon | RPL11 | 1 | + | NDUFB4 | 3 | + |
| exon-exon | UBLCP1 | 5 | - | PKNOX1 | 21 | + |
| exon-exon | SEPTIN3 | 22 | + | RALGAPA1 | 14 | - |
| exon-exon | DAGLA | 11 | - | DAGLA | 11 | + |
| exon-exon | TUBA1B | 12 | + | FAM98B | 15 | - |
| intron-exon | RNF185 | 22 | - | SNORD3A | 17 | - |
| exon-intron | RNA45SN1 | 21 | + | LOC105371574 | 17 | - |
| exon-exon | SULF2 | 20 | - | NCOA3 | 20 | - |
| intron-exon | PAXBP1-AS1 | 21 | + | TUT7 | 9 | - |
| exon-intron | RNA45SN3 | 21 | + | IGH | 14 | - |
| intron-exon | TTTY10 | Y | - | ARIH1 | 15 | - |
| exon-exon | GTF2E2 | 8 | + | EXOSC10 | 1 | + |
| intron-exon | MIR99AHG | 21 | + | SACM1L | 3 | - |
| exon-exon | DEF8 | 16 | - | APLP2 | 11 | - |
| exon-exon | PAFAH1B2 | 11 | - | ZFAND5 | 9 | + |
| exon-intron | CSNK1E | 22 | + | TPTEP2 | 22 | + |
| exon-exon | SAMM50 | 22 | - | UNC5B | 10 | - |
| exon-exon | CHKA | 11 | - | TCIRG1 | 11 | - |
| exon-exon | TSPAN4 | 11 | - | TSPAN4 | 11 | + |
| intron-exon | CCDC30 | 1 | + | MTMR14 | 3 | - |
| exon-exon | RPS16 | 19 | + | GABARAPL1 | 12 | - |
| exon-exon | MFSD12 | 19 | + | MFSD12 | 19 | - |
| exon-exon | LOC105374836 | 2 | - | TPM3 | 1 | + |
| exon-exon | LITAF | 16 | + | CD68 | 17 | - |
| exon-exon | COMT | 22 | - | NICN1 | 3 | + |
| exon-exon | AIF1 | 6 | - | COX2 | MT | - |
| exon-exon | IFITM2 | 11 | - | NMI | 2 | + |
| exon-intron | LOC101928042 | 15 | + | LOC106736481 | 15 | + |
| intron-exon | RP11-739N20.2 | 1 | + | CNNM2 | 10 | + |
| exon-exon | MSRA | 8 | - | SOAT1 | 1 | - |
| exon-exon | EPHA1 | 7 | - | EEF1A1 | 6 | + |
| exon-exon | RPLP2 | 11 | - | MNDA | 1 | - |
| exon-exon | STMP1 | 7 | - | AP2M1 | 3 | - |
| intron-exon | LOC101929031 | 16 | - | LRRC57 | 15 | + |
| exon-exon | SLC16A3 | 17 | - | SLC16A3 | 17 | + |
| exon-exon | CTSB | 8 | + | KPNA6 | 1 | - |
| exon-intron | IRAK1 | X | + | TECR | | - |
| exon-exon | RASAL2 | 1 | - | PPM1G | 2 | - |
| exon-exon | SYF2 | 1 | + | SYF2 | | - |
| exon-exon | DZIP1 | 13 | + | DZIP1 | 13 | - |
| exon-exon | KYNU | 2 | - | KYNU | 2 | + |
| exon-intron | DNAJC25-GNG10 | 9 | - | SBF2 | 11 | - |
| exon-exon | CAPZA1 | 1 | - | CAPZA1 | 1 | + |
| exon-exon | CYTB | MT | - | CYTB | MT | + |
| exon-exon | ARPC2 | 2 | - | ARPC2 | 2 | + |
| exon-exon | ATP6 | MT | - | RAN | 12 | + |
| intron-exon | TTC1 | 5 | + | ZCCHC17 | 1 | + |
| exon-intron | RAC1 | 7 | - | PTHLH | | + |
| exon-exon | ND5 | MT | - | ND5 | MT | + |
| exon-exon | SNTN | 3 | - | SNTN | 3 | + |
| exon-exon | RALA | 7 | - | RALA | 7 | + |
| exon-exon | KRT18P8 | | + | ATP6 | MT | + |
| exon-exon | NUCB2 | 11 | - | NUCB2 | 11 | + |
| exon-exon | APTR | 7 | + | APTR | | - |
| exon-exon | DYNC1LI2 | 16 | + | DYNC1LI2 | 16 | - |
| exon-intron | PDXK | 21 | - | ZNF749 | 19 | - |
| exon-exon | PTGES3 | 12 | + | PTGES3 | 12 | - |
| exon-exon | LINC01578 | 15 | - | LINC01578 | 15 | + |
| intron-exon | GOLGA4 | 3 | + | ZNF738 | 19 | + |
| exon-exon | PPP2R2A | 8 | - | PPP2R2A | 8 | + |
| exon-exon | RPS8 | 1 | - | RPS8P8 | 5 | + |
| exon-exon | UGT1A6 | 2 | + | ATP6 | MT | + |
| exon-exon | RPS20P10 | 2 | + | RPS20 | 8 | - |
| exon-exon | MXD4 | 4 | + | MXD4 | 4 | - |
| intron-exon | SLC4A4 | 4 | + | KPNA6 | 1 | + |
| intron-exon | LMTK2 | | + | ROCK2 | 2 | - |
| exon-exon | BICDL1 | 12 | - | SLC4A2 | 7 | + |
| exon-intron | TPT1 | 13 | + | TPT1P6 | | - |
| exon-exon | PLEKHA2 | 8 | - | ND3 | MT | + |
| exon-exon | CFAP69 | 7 | - | CFAP69 | 7 | + |
| exon-exon | PSMB4 | 1 | - | PSMB4 | 1 | + |
| exon-exon | TALAM1 | 11 | - | MALAT1 | 11 | + |
| intron-exon | PAXBP1-AS1 | 21 | + | PAXBP1 | 21 | - |
| exon-exon | LINC01410 | | + | VWA5A | | + |
| exon-intron | ATP6 | MT | - | BTBD9 | 6 | + |
| exon-exon | IGFBP5 | 2 | - | DDT | 22 | - |
| intron-exon | EEF1DP1 | 19 | - | EEF1A1 | 6 | + |
| exon-exon | RNA45SN3 | 21 | + | MYLPF | 16 | + |
| exon-exon | AKAP10 | 17 | + | RNA45SN2 | 21 | - |
| exon-exon | VRK3 | 19 | + | LGALS9 | 17 | - |
| exon-exon | USP39 | 2 | - | RPL35A | 3 | + |
| exon-exon | RPS6 | 9 | + | NACAD | 7 | + |
| intron-exon | GABRG3 | 15 | - | CALCOCO2 | 17 | + |
| exon-exon | PBX2 | 6 | + | PBX2 | 6 | - |
| exon-exon | RNA45SN2 | 21 | + | RPL18 | 19 | - |
| exon-exon | RNA45SN1 | 21 | + | HSPB1 | 7 | + |
| exon-exon | SIPA1L1 | 14 | + | TMEM200B | 1 | - |
| exon-intron | ARHGAP31 | 3 | + | TYW1 | 7 | - |
| exon-exon | YIPF3 | 6 | + | YIPF3 | 6 | - |
| exon-exon | COX7A1 | 19 | - | TOP2B | 3 | - |
| exon-exon | SMR3B | 4 | + | MUC7 | 4 | + |
| exon-intron | EEF1A1P5 | 9 | + | PRH1-PRR4 | 12 | - |
| intron-exon | LOC110467536 | | - | SLC35E2B | 1 | - |
| intron-exon | NELFCD | 20 | + | TMSB4X | X | + |
| exon-exon | DUXAP10 | | - | NBEAP6 | | - |
| intron-exon | IGK | 2 | + | IGKV1-39 | 2 | - |
| exon-intron | IGKV1D-39 | 2 | + | IGK | 2 | - |
| intron-exon | RNR1 | MT | + | STATH | 4 | + |
| exon-intron | AMY1C | | + | RNR2 | MT | + |
| intron-exon | IGHV3-23 | 14 | - | MLPH | 2 | + |
| exon-exon | STATH | 4 | + | HTN3 | 4 | + |
| exon-exon | AMY2B | 1 | + | AMYP1 | | + |
| exon-exon | AMY2B | 1 | + | AMY2A | 1 | + |
| exon-exon | HTN3 | 4 | + | STATH | 4 | + |
| exon-exon | AMY1A | | + | AMYP1 | | + |
| exon-exon | EEF1A1P43 | | + | RPL5 | 1 | + |
| exon-intron | IGKV2D-28 | 2 | + | IGK | 2 | - |
| exon-exon | SNHG32 | 6 | + | B2M | 15 | + |
| intron-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-exon | BMS1P20 | 22 | + | IGLL5 | 22 | + |
| exon-exon | KPNA6 | 1 | + | SUGP2 | 19 | - |
| intron-exon | MMP24-AS1-EDEM2 | 20 | - | RBM39 | 20 | - |
| intron-exon | CACNB2 | 10 | + | SPARCL1 | 4 | - |
| exon-exon | ATP8 | MT | + | ATP6 | MT | + |
| intron-exon | PDE3B | 11 | - | PCDH9 | 13 | - |
| exon-exon | HSPB8 | 12 | + | TAGLN | 11 | + |
| intron-exon | RAB3GAP2 | 1 | + | MORF4L1P1 | 1 | + |
| exon-intron | SDHAF2 | 11 | + | AP003108.2 | 11 | + |
| exon-intron | SMAD3 | 15 | + | RP11-146E13.4 | | + |
| exon-intron | TAPT1 | | - | MRTFA | 22 | + |
| intron-exon | CRYAB | 11 | - | FDXACB1 | 11 | - |
| exon-exon | NPIPB12 | 16 | - | NPIPB11 | 16 | - |
| exon-exon | ND2 | MT | - | FOSL2 | 2 | + |
| exon-exon | PTMA | 2 | + | CREM | 10 | + |
| exon-exon | RPL21P16 | 10 | - | LDHB | 12 | - |
| exon-exon | HTN3 | 4 | + | HTN1 | 4 | + |
| exon-intron | NAA20 | 20 | + | LINC00910 | 17 | - |
| exon-intron | HPS4 | 22 | - | FAM124B | | + |
| exon-exon | MALAT1 | 11 | + | RC3H2 | 9 | - |
| intron-exon | ERBB4 | 2 | + | EAF1 | | + |
| exon-exon | RPS14 | 5 | - | RPL14 | 3 | + |
| exon-exon | CD74 | 5 | - | BPIFA2 | 20 | + |
| exon-intron | IGLV1-40 | 22 | + | IGL | 22 | + |
| exon-intron | LYZ | 12 | + | TAF6 | 7 | + |
| exon-exon | UIMC1 | 5 | - | MALAT1 | 11 | + |
| exon-exon | IGHG1 | 14 | - | IGHG4 | 14 | - |
| exon-intron | RNA45SN3 | 21 | + | IGH | 14 | - |
| exon-intron | IGKV1-39 | 2 | - | IGK | 2 | - |
| exon-exon | IGKV2D-30 | 2 | + | LOC107985910 | | - |
| exon-intron | SLC19A3 | 2 | - | SLC4A10 | 2 | + |
| exon-exon | RSAD2 | 2 | + | WAC | 10 | + |
| exon-exon | PPP2R2A | 8 | + | PCMTD1 | 8 | - |
| exon-exon | HSD11B2 | 16 | + | SLC39A1 | 1 | - |
| exon-intron | FAM156A | | - | FAM156B | X | - |
| exon-exon | CLDN4 | 7 | + | IGF2BP3 | 7 | - |
| exon-exon | SNX4 | 3 | - | OSBPL11 | 3 | - |
| intron-exon | SPATA9 | 5 | + | RHOBTB3 | 5 | + |
| exon-exon | CSH1 | 17 | - | CSH2 | 17 | - |
| intron-exon | AC061975.4 | | + | LOC101926984 | | + |
| exon-intron | CASP4 | | - | FOXP1 | 3 | - |
| exon-exon | RFTN1 | 3 | - | MAPK9 | 5 | - |
| intron-exon | TIMMDC1 | 3 | + | KIF3A | 5 | - |
| intron-exon | IGH | 14 | - | IGHE | 14 | - |
| exon-exon | CSH1 | 17 | - | GH2 | 17 | - |
| intron-exon | AC010894.3 | | + | LOC105373750 | | + |
| intron-exon | AL445205.1 | | + | LOC105378773 | | + |
| exon-intron | IST1 | 16 | + | KIF5C-AS1 | | - |
| exon-exon | ADD3 | 10 | + | SYNPO2 | 4 | + |
| exon-exon | SNHG32 | 6 | + | SVIL | 10 | - |
| exon-exon | LARS1 | 5 | - | HSP90AA1 | 14 | - |
| exon-exon | AHNAK | 11 | - | DLC1 | 8 | - |
| exon-exon | IARS1 | 9 | - | TTR | 18 | + |
| intron-exon | FAM219A | 9 | - | ND1 | MT | + |
| exon-exon | NAA50 | 3 | - | STATH | 4 | + |
| exon-intron | COX3 | MT | + | EBF4 | | + |
| exon-exon | RNA45SN2 | 21 | + | TTR | 18 | + |
| intron-exon | NDST4 | 4 | + | BNC2 | 9 | + |
| intron-exon | ADH1C | | - | ADH1A | | - |
| exon-intron | LAMTOR4 | 7 | + | LINC01580 | | + |
| exon-intron | RPS18P5 | 3 | - | PCNP | 3 | - |
| exon-exon | DAZAP1 | 19 | + | MAD1L1 | 7 | - |
| exon-intron | RPL15P3 | 6 | + | DNAH3 | 16 | - |
| exon-exon | RPL37A | 2 | + | SENP3-EIF4A1 | 17 | + |
| exon-exon | RPLP0 | 12 | - | PMPCB | 7 | + |
| exon-exon | PANK1 | | + | LOC105378421 | | + |
| exon-exon | RPL11 | 1 | + | ATF4P1 | X | - |
| intron-exon | AC093627.1 | 7 | - | LOC105375113 | 7 | - |
| exon-exon | S100A11 | 1 | - | YWHAZ | 8 | - |
| exon-exon | ND4 | MT | + | HDGF | 1 | - |
| exon-intron | RPS14 | 5 | - | AFF4 | 5 | - |
| exon-intron | UBA52 | 19 | + | LOC100506474 | 2 | + |
| exon-intron | NOTCH2 | 1 | - | SLC44A1 | 9 | + |
| exon-intron | RPL36 | 19 | + | UNC5D | | - |
| exon-exon | RPS21 | 20 | + | RPL37 | 5 | - |
| exon-intron | RPS18P5 | 3 | - | PCNP | 3 | - |
| intron-exon | RNU6-3P | X | - | LOC105371686 | | + |
| exon-exon | CCNL2 | 1 | - | UBA2 | 19 | + |
| intron-exon | IL4I1 | 19 | - | KCTD2 | 17 | + |
| intron-exon | RERE | 1 | - | TTR | 18 | + |
| exon-intron | TTR | 18 | + | NCEH1 | 3 | - |
| intron-exon | MAGI2 | 7 | - | RPL34P6 | | + |
| exon-intron | EEF1A1P6 | 7 | - | PZP | | - |
| exon-exon | FRG1EP | | - | LOC105379477 | | - |
| intron-exon | FOXP1 | 3 | - | RPL5P34 | | - |
| intron-exon | PARD3 | 10 | - | FTH1 | 11 | - |
| intron-exon | TTC28 | 22 | - | ND4 | MT | + |
| exon-intron | NOP58 | 2 | + | RITA1 | | + |
| exon-intron | EFCAB6 | 22 | + | Z97055.2 | | + |
| exon-intron | SDHC | 1 | + | RPA1 | 17 | - |
| exon-intron | RND2 | | + | SLC29A4 | | - |
| exon-intron | RCN1 | 11 | + | ENOX1 | 13 | - |
| exon-exon | CHCHD2 | 7 | + | CHCHD2 | 7 | - |
| exon-intron | TPT1 | 13 | - | PARN | 16 | + |
| exon-intron | ATP6V0B | 1 | + | ABCG5 | | - |
| exon-intron | GH1 | 17 | - | GH-LCR | 17 | - |
| exon-intron | PHF1 | 6 | + | LOC100420547 | | - |
| exon-exon | AMPD3 | 11 | + | IER3 | 6 | - |
| intron-exon | CLNS1A | 11 | + | LOC646029 | 11 | + |
| intron-exon | ZFC3H1 | 12 | + | THAP2 | | + |
| exon-exon | RNA45SN3 | 21 | + | RAB21 | 12 | + |
| exon-exon | HSD11B2 | 16 | + | SLC39A1 | 1 | - |
| exon-intron | MRGPRE | | + | AC109309.1 | | + |
| exon-intron | FXYD1 | 19 | + | FXYD7 | 19 | + |
| intron-exon | ACOT1 | 14 | + | FNBP1 | 9 | - |
| exon-exon | CSPG4 | 15 | - | SON | 21 | + |
| exon-exon | COX7C | 5 | + | TESPA1 | | - |
| exon-intron | STMP1 | 7 | + | RP11-290F24.3 | | + |
| intron-exon | LOC101928034 | 1 | - | S100A4 | 1 | - |
| exon-intron | EIF4G2 | 11 | - | RPS15AP1 | | - |
| exon-intron | ATP8 | MT | + | ATP6 | MT | + |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-exon | ATP8 | MT | + | ATP6 | MT | + |
| intron-exon | RNR1 | MT | + | PHF19 | 9 | - |
| exon-intron | ARPC5L | | + | LOC105370328 | | - |
| exon-exon | RPS13 | 11 | - | RPS13 | 11 | + |
| exon-exon | RPL27AP6 | 6 | - | RPL27A | 11 | - |
| intron-exon | RNF157 | 17 | - | DDX59-AS1 | 1 | + |
| exon-exon | COX3 | MT | + | RPL13AP5 | 10 | + |
| exon-exon | SRP9 | 1 | + | SRP9 | 1 | - |
| exon-exon | SPTSSA | 14 | - | SPTSSA | 14 | + |
| exon-exon | TMSB4XP8 | 4 | - | TMSB4X | X | - |
| exon-exon | NAA35 | 9 | + | NAA35 | 9 | - |
| exon-exon | SLBP | 4 | - | SLBP | 4 | + |
| exon-exon | PCM1 | 8 | + | PCM1 | 8 | - |
| exon-exon | BTG2 | 1 | + | BTG2 | 1 | - |
| exon-exon | SF1 | 11 | + | ATP8 | MT | - |
| exon-exon | ACTG1 | 17 | - | ACTG1 | 17 | + |
| exon-exon | MR1 | 1 | + | MR1 | 1 | - |
| exon-exon | IL1B | 2 | - | IL1B | 2 | + |
| exon-exon | SNX3 | 6 | - | SNX3 | 6 | + |
| intron-exon | STARD13 | 13 | - | MAP1B | 5 | + |
| exon-intron | MSI2 | 17 | + | RPL7P9 | 1 | - |
| exon-intron | PRORP | | + | PSMA6 | 14 | + |
| exon-exon | CDC42EP3 | 2 | - | CASTOR3 | 7 | - |
| exon-intron | CLDND1 | 3 | - | ZFYVE9 | 1 | - |
| intron-exon | TTC17 | | - | API5 | 11 | - |
| exon-exon | VIRMA | 8 | - | ZNF148 | 3 | - |
| exon-exon | PRPSAP2 | 17 | + | MR1 | 1 | + |
| exon-exon | CFAP53 | 18 | - | UPF3A | 13 | + |
| intron-exon | AC183088.3 | | + | LINC02203 | | + |
| intron-exon | ZNF883 | 9 | - | LMNA | 1 | + |
| exon-exon | AHR | 7 | + | CCDC144CP | 17 | + |
| intron-exon | LINC02021 | 3 | + | FAM120B | | + |
| intron-exon | NMNAT3 | | + | LOC101928032 | Y | - |
| exon-intron | RPS5 | 19 | + | LINC00856 | 10 | + |
| intron-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-intron | RPL13 | 16 | + | DYNC1I1 | 7 | - |
| exon-intron | RPL10A | 6 | + | PTPRG | 3 | - |
| exon-intron | RPS20 | 8 | - | CAMK1D | 10 | + |
| exon-intron | IFITM2 | 11 | + | DLGAP1-AS3 | | + |
| exon-intron | NDUFA2 | 5 | - | MTMR3 | 22 | + |
| exon-exon | POMC | 2 | - | RPL14P1 | 12 | + |
| exon-exon | SARAF | 8 | - | FBXO31 | 16 | - |
| intron-exon | CCNG1 | | + | NUDCD2 | 5 | + |
| intron-exon | UNC79 | | + | CYTB | MT | + |
| intron-exon | TSNAX-DISC1 | 1 | + | HECA | 6 | + |
| exon-intron | LOC105374121 | | - | MRPL33 | 2 | + |
| exon-exon | ND5 | MT | + | ND6 | MT | + |
| exon-intron | ATRX | X | - | DEUP1 | | - |
| exon-intron | ZMAT3 | 3 | - | KCNMB2-AS1 | | - |
| intron-exon | SMIM2-AS1 | | - | LOC107984601 | | - |
| exon-intron | LOC102723834 | | + | AC099066.2 | 1 | + |
| exon-exon | NDUFAF4 | 6 | - | CCDC47 | 17 | - |
| exon-intron | SPDYE17 | | + | SPDYE9 | 7 | + |
| exon-exon | SOD3 | | + | ND3 | MT | + |
| exon-intron | RNA45SN3 | 21 | + | PTPRN2 | 7 | - |
| intron-exon | PRORP | | - | CFL2 | 14 | - |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-intron | ABCD3 | 1 | + | RACK1 | 5 | - |
| exon-exon | AKIRIN1 | 1 | + | RAB21 | 12 | + |
| exon-intron | LOC105375322 | 7 | - | FAM222B | 17 | + |
| exon-exon | LOC107984578 | 13 | - | LCP1 | 13 | - |
| intron-exon | MAP3K13 | 3 | - | ZFP36L1 | 14 | - |
| exon-exon | LOC105375567 | 7 | + | AOC1 | 7 | + |
| exon-exon | WDR7 | 18 | + | WDR7-OT1 | | + |
| exon-exon | SMIM29 | 6 | + | H1-0 | 22 | - |
| exon-exon | ATP6V1C2 | 2 | + | PDIA6 | 2 | + |
| exon-exon | GNL2 | 1 | + | CXCL1 | 4 | - |
| exon-exon | RAC1 | 7 | - | PKM | 15 | + |
| exon-exon | S100A11 | 1 | + | RCC1L | 7 | + |
| intron-exon | RASSF3 | 12 | + | GNS | 12 | + |
| exon-exon | PRRC2A | 6 | - | SHISA5 | 3 | + |
| exon-exon | PLEC | 8 | + | EHBP1L1 | 11 | - |
| exon-exon | CCAR1 | 10 | - | STOM | 9 | + |
| exon-exon | NAA20 | 20 | - | SCD | 10 | - |
| exon-exon | RPL14 | 3 | - | HLA-DRB5 | 6 | + |
| exon-exon | DNAJA2 | 16 | + | SRP68 | 17 | + |
| exon-exon | RPL37A | 2 | - | HCK | 20 | - |
| intron-exon | RNR1 | MT | - | SOD2 | 6 | + |
| exon-exon | DENND3 | 8 | + | LOC105375785 | 8 | + |
| exon-exon | LITAF | 16 | + | HLA-DRA | 6 | - |
| exon-exon | CEBPA | 19 | + | COL27A1 | 9 | + |
| exon-exon | MAP1LC3B2 | 12 | - | TGOLN2 | 2 | + |
| exon-exon | GBA2 | 9 | + | SNRPA | 19 | - |
| exon-intron | RPL23P8 | 7 | - | LAMP2 | X | - |
| exon-exon | FAM166A | 9 | - | TUBB4B | 9 | - |
| exon-exon | CALM1 | 14 | - | RALA | 7 | - |
| exon-exon | UCP2 | 11 | + | TCF20 | 22 | + |
| exon-exon | COX3 | MT | - | CHCHD10 | 22 | + |
| intron-exon | RBL1 | 20 | - | C2 | 6 | - |
| exon-exon | ANXA2 | 15 | + | CREM | 10 | - |
| exon-intron | IL18 | 11 | + | GPBP1L1 | 1 | + |
| intron-exon | FGF7P3 | 9 | + | RNA45SN2 | 21 | - |
| exon-exon | TUBA1C | 12 | - | UBB | 17 | - |
| intron-exon | CCDC51 | 3 | - | MYD88 | 3 | - |
| intron-exon | MELTF | 3 | + | MELTF | 3 | - |
| exon-exon | RPL38 | 17 | - | RPL3 | 22 | + |
| exon-exon | CSNK1G2 | 19 | - | CSNK1G2 | 19 | + |
| exon-exon | GPR108 | 19 | + | GPR108 | 19 | - |
| exon-exon | RUSC2 | 9 | - | RUSC2 | 9 | + |
| intron-exon | APBB2 | 4 | + | GM2A | 5 | - |
| exon-exon | ATP5PO | 21 | + | TGFB1 | 19 | + |
| exon-exon | U2AF2 | 19 | - | ECSCR | 5 | + |
| exon-exon | NCF2 | 1 | + | TUBA1C | 12 | - |
| intron-exon | VPS53 | 17 | - | PARP14 | 3 | - |
| intron-exon | LOC105376299 | 9 | - | IDO1 | 8 | - |
| exon-intron | CTSS | 1 | + | PPFIA1 | 11 | + |
| intron-exon | COX2 | MT | - | RNA45SN2 | 21 | - |
| exon-exon | NMB | 15 | + | ZNF35 | 3 | - |
| exon-exon | SH3BGRL3 | 1 | - | APP | 21 | + |
| intron-exon | SRD5A3-AS1 | 4 | + | TMEM165 | 4 | + |
| exon-exon | C1QC | 1 | - | MYO1F | 19 | + |
| exon-exon | LOC107984088 | 20 | + | LOC102724545 | 20 | + |
| intron-exon | AF241726.2 | X | - | CYBB | X | - |
| exon-exon | PSAP | 10 | + | HLA-DPA1 | 6 | + |
| exon-exon | RPLP2 | 11 | - | RPN1 | 3 | + |
| exon-intron | TIMM10 | | - | KMT2C | 7 | + |
| exon-intron | ZNF280D | 15 | - | PLA2G4C | 19 | + |
| exon-intron | RPL23AP65 | | + | APOO | X | - |
| exon-intron | BANF1 | 11 | + | CAB39 | 2 | - |
| intron-exon | LOC105377043 | 3 | + | PDLIM1 | 10 | - |
| exon-intron | RPL27A | 11 | + | INPP5J | 22 | + |
| exon-intron | RPL10P16 | 19 | - | RASGRF1 | 15 | - |
| exon-intron | RPL10AP6 | 3 | - | PTPRG | 3 | - |
| exon-intron | SNRPF | 12 | + | EPHA10 | | + |
| exon-intron | NDUFA4 | 7 | - | ALDH16A1 | 19 | + |
| intron-exon | TSPAN9 | 12 | - | ATP6V1E1 | 22 | - |
| exon-exon | HSPB1 | 7 | + | UBE2M | 19 | - |
| exon-intron | GAPDH | 12 | + | UBQLN4P1 | 3 | - |
| exon-intron | MDK | 11 | + | LINC00856 | 10 | + |
| exon-intron | FDFT1 | 8 | + | LOC107985661 | | - |
| exon-exon | RNA45SN2 | 21 | + | SOX4 | 6 | + |
| exon-intron | SNHG29 | 17 | + | CSF1R | 5 | + |
| intron-exon | RPL11 | 1 | + | TKT | 3 | - |
| exon-intron | HNRNPA1 | 12 | + | LOC105374310 | | - |
| exon-exon | RPLP1 | 15 | + | EEF1A1P5 | 9 | + |
| exon-intron | RPL35 | 9 | - | ACSF2 | 17 | - |
| exon-intron | LOC105374313 | | + | AC117386.2 | | + |
| exon-exon | RPL10A | 6 | + | ZFHX3 | | - |
| exon-intron | RPL37 | 5 | - | LOC105374310 | | - |
| exon-intron | UBA52 | 19 | + | ANKHD1-EIF4EBP3 | 5 | - |
| exon-exon | RPL29 | 3 | - | FAM210B | 20 | + |
| intron-exon | HERC3 | 4 | + | ADAM33 | | - |
| exon-intron | POMC | 2 | - | CACNA1B | 9 | - |
| exon-exon | APCDD1L-DT | 20 | + | TSC22D1 | 13 | - |
| exon-exon | ZNF329 | 19 | - | SNHG14 | 15 | + |
| exon-intron | ARMCX5-GPRASP2 | X | + | LINC00630 | | + |
| exon-exon | MYO1C | 17 | - | IFT22 | 7 | - |
| exon-exon | LOC107984428 | | - | LOC107984429 | | - |
| exon-exon | RNA45SN1 | 21 | + | GNAS | 20 | + |
| intron-exon | MAS1 | | + | COX1 | MT | + |
| exon-intron | TXNL4B | 16 | - | NR4A1 | 12 | + |
| intron-exon | REXO4 | | - | RNH1 | 11 | - |
| intron-exon | BIRC6 | 2 | - | COX2 | MT | + |
| exon-exon | HLA-DRB1 | 6 | - | HLA-DRB6 | 6 | - |
| exon-intron | TAF15 | 17 | + | GPM6B | X | + |
| exon-intron | PRMT5 | 14 | - | ZNF331 | 19 | - |
| intron-exon | AC021660.3 | | - | GPR15 | | - |
| exon-intron | RPS13 | 11 | - | LOC105372275 | 19 | - |
| exon-intron | CCL2 | 17 | + | ANK2 | 4 | - |
| exon-exon | IL1RN | 2 | + | NUCKS1 | 1 | - |
| exon-exon | FTH1 | 11 | - | EGR3 | 8 | - |
| exon-intron | PCED1B-AS1 | 12 | - | PCED1B | 12 | - |
| exon-exon | TBCB | 19 | + | SERPINB2 | 18 | + |
| exon-exon | RETREG3 | 17 | - | ND1 | MT | + |
| exon-exon | WASL | 7 | - | RALBP1 | 18 | + |
| exon-intron | TRIM11 | | - | LOC284930 | | + |
| exon-exon | ATP6 | MT | - | COX3 | MT | + |
| intron-exon | TRNE | MT | - | COX1 | MT | + |
| exon-exon | RPL39P3 | 6 | - | GLULP3 | | + |
| exon-intron | LOC107985568 | | + | CHKB-DT | | + |
| exon-intron | LOC105373637 | 2 | - | AC114763.1 | 2 | - |
| intron-exon | DSCR9 | 21 | - | RAD21 | 8 | - |
| exon-exon | RWDD1 | 6 | + | DNAH12 | 3 | - |
| intron-exon | PRR23D1 | | + | ND2 | MT | + |
| exon-intron | FTH1 | 11 | - | MAST4 | 5 | - |
| exon-intron | IL12B | | + | LOC107986469 | | + |
| exon-intron | IL12B | | + | LOC107986469 | | + |
| exon-exon | RPL3 | 22 | - | RPL3P4 | 14 | - |
| exon-intron | RPS4X | X | - | LOC105375630 | 8 | - |
| exon-exon | OAZ1 | 19 | + | LYZ | 12 | - |
| exon-intron | RPL27AP6 | 6 | + | PIGF | | - |
| exon-exon | IGFBP7 | 4 | + | IGFBP7-AS1 | 4 | + |
| exon-exon | ADAM19 | 5 | + | HPD | 12 | - |
| exon-exon | SLC25A1 | 22 | - | JUN | 1 | - |
| intron-exon | LOC112268150 | 15 | - | MAPK6 | 15 | - |
| intron-exon | ABHD12 | 20 | - | PYGB | 20 | - |
| intron-exon | PDZD9 | 16 | - | UQCRC2 | 16 | - |
| exon-exon | ERH | 14 | + | HNRNPA0 | 5 | + |
| intron-exon | HSP90B1 | 12 | + | STAU1 | 20 | + |
| exon-exon | LRRC32 | | + | LOC107984360 | 11 | + |
| exon-intron | MAP3K5 | 6 | + | MAP3K5-AS1 | 6 | + |
| exon-exon | TUBA1B | 12 | + | NPTXR | 22 | + |
| exon-intron | SAP30BP | 17 | - | BEAN1 | 16 | + |
| exon-exon | ZNF646 | 16 | - | PSMD6 | 3 | - |
| exon-exon | LOC105370854 | | - | TLN2 | 15 | - |
| intron-exon | CSNK1G1 | 15 | + | PCLAF | 15 | + |
| exon-intron | HIPK2 | 7 | + | LOC105375530 | 7 | + |
| exon-exon | B4GALNT1 | | - | SLC26A10 | | - |
| intron-exon | LOC105374065 | 3 | + | GPR156 | 3 | - |
| intron-exon | LOC105374065 | 3 | + | GPR156 | 3 | - |
| exon-exon | EPB41L5 | | + | FOXN3 | 14 | + |
| exon-exon | FTH1 | 11 | - | ZFP36L2 | 2 | - |
| intron-exon | PBX3 | 9 | + | KDM5A | 12 | - |
| intron-exon | USP32 | 17 | - | UPF2 | 10 | - |
| exon-intron | ATP6 | MT | - | SEC23A | 14 | + |
| exon-intron | RPL30 | 8 | - | LOC105377937 | | + |
| exon-exon | RNA45SN2 | 21 | + | CRIPT | 2 | + |
| intron-exon | RAB3GAP2 | 1 | + | MORF4L1P1 | 1 | + |
| exon-intron | MYL6 | 12 | + | ZNF331 | 19 | - |
| exon-exon | GPR15 | | - | RPL38P4 | 3 | - |
| exon-exon | CCL4 | 17 | + | PRPF38A | 1 | + |
| exon-intron | PLAGL2 | 20 | - | AL445242.1 | 13 | + |
| intron-exon | RNR2 | MT | + | COX3 | MT | + |
| exon-intron | CDK2AP2 | 11 | - | GH-LCR | 17 | + |
| exon-exon | FTH1 | 11 | + | ARPC2 | 2 | + |
| intron-exon | RP11-290F24.3 | | - | OR56B4 | | - |
| exon-exon | BUB1B | 15 | - | BUB1B | 15 | + |
| exon-exon | ND1 | MT | + | IST1 | 16 | + |
| intron-exon | AC069277.1 | | + | LOC105376944 | | + |
| exon-exon | RNA45SN3 | 21 | + | METTL22 | 16 | + |
| exon-exon | HSP90AA1 | 14 | + | HSP90AA1 | 14 | - |
| exon-intron | CTNND1 | 11 | + | LINC00662 | 19 | + |
| exon-intron | HSP90AB1 | 6 | + | KCNMA1 | 10 | - |
| exon-intron | ZNF506 | 19 | - | LINC00663 | | - |
| exon-intron | HIF1A | 14 | + | OFD1 | X | + |
| intron-exon | LOC105376547 | 11 | - | LOC112268072 | 11 | - |
| exon-intron | RNA45SN3 | 21 | + | ADAMTS6 | 5 | - |
| exon-intron | ANTXR1 | 2 | + | AC011897.2 | 2 | + |
| exon-exon | USP2 | 11 | - | CEP63 | 3 | + |
| intron-exon | SDHD | 11 | + | EPDR1 | 7 | + |
| intron-exon | IGF1R | 15 | + | C12orf49 | | - |
| exon-intron | LOC107987063 | 9 | + | AL162231.2 | 9 | + |
| intron-exon | VPS26C | 21 | - | DSCR9 | 21 | - |
| exon-intron | SNX29 | 16 | - | SOX2-OT | 3 | - |
| intron-exon | LINC01224 | | - | LOC107985285 | | + |
| exon-exon | FBXL22 | 15 | - | USP3-AS1 | 15 | - |
| exon-intron | NSUN3 | 3 | + | ASPH | 8 | - |
| exon-intron | LOC101928626 | 1 | - | LOC107984841 | 1 | - |
| exon-intron | ZEB1-AS1 | | - | LINC02664 | | - |
| intron-exon | LINC02694 | 15 | - | LOC105370777 | 15 | - |
| exon-intron | ZNF562 | 19 | + | ZNF812P | | + |
| intron-exon | AC007220.1 | | + | LOC107984859 | | + |
| exon-exon | BORCS5 | 12 | + | LTO1 | 11 | - |
| exon-intron | LOC105369483 | | - | LINC02715 | | - |
| intron-exon | HSPG2 | 1 | - | MOV10 | 1 | + |
| intron-exon | ZNRF1 | 16 | + | VPS11 | | + |
| exon-intron | FAM126A | 7 | - | CCDC192 | 5 | - |
| exon-intron | TSPAN3 | 15 | - | IGF2R | 6 | - |
| exon-intron | SIK3 | 11 | - | TDH | | + |
| intron-exon | RNR2 | MT | + | WAC-AS1 | 10 | - |
| intron-exon | RNA18SP5 | 21 | + | ACTBP2 | | + |
| exon-exon | DDX5 | 17 | - | PRKCB | 16 | + |
| exon-exon | IGHV5-10-1 | | - | IGHG3 | 14 | - |
| exon-intron | RNA45SN3 | 21 | + | RNR2 | MT | + |
| intron-exon | LINC00869 | 1 | + | PSMB1 | 6 | - |
| intron-exon | RNR2 | MT | + | ND4L | MT | + |
| exon-intron | IGKV1D-39 | 2 | + | IGK | 2 | - |
| exon-intron | IGKV1-6 | | - | IGK | 2 | - |
| exon-exon | ND6 | MT | - | COX1 | MT | + |
| intron-exon | IGK | 2 | + | IGKV1-33 | 2 | - |
| exon-intron | TRAV4 | 14 | + | TRA | 14 | + |
| exon-exon | RPS18 | 6 | + | FERMT3 | | + |
| exon-exon | IGLV2-18 | | + | IGLV2-8 | | + |
| intron-exon | TRA | 14 | + | TRAC | 14 | + |
| exon-intron | IGKV4-1 | 2 | + | IGK | 2 | + |
| exon-exon | RNA45SN1 | 21 | + | IGHG1 | 14 | - |
| exon-intron | IGKV3-11 | | - | IGK | 2 | - |
| exon-exon | RNA45SN2 | 21 | + | PDCD4 | 10 | + |
| exon-exon | RNA45SN3 | 21 | + | ATP6V0E1 | 5 | + |
| exon-intron | IGLV1-36 | 22 | + | IGL | 22 | + |
| intron-exon | AC093821.1 | 4 | + | LINC02435 | 4 | + |
| exon-exon | IGLV2-14 | 22 | + | IGLC2 | 22 | + |
| intron-exon | TMCO5A | 15 | + | LINC02345 | 15 | + |
| intron-exon | DYM | 18 | - | TSPAN14 | 10 | + |
| exon-exon | LOC107984450 | 12 | - | PID1 | 2 | - |
| exon-exon | ST13 | 22 | - | KMT2E | 7 | + |
| exon-intron | IGLV2-14 | 22 | + | IGL | 22 | + |
| exon-exon | RNA45SN2 | 21 | + | GOLGA4 | 3 | + |
| exon-exon | RNA45SN2 | 21 | + | ABRAXAS2 | | + |
| exon-intron | LOC105377633 | 2 | + | XPO1 | 2 | + |
| exon-intron | IGKV3-11 | | - | IGK | 2 | - |
| exon-exon | LOC102723759 | 3 | - | LOC107986129 | | - |
| intron-exon | LOC105378878 | | - | AMY1B | 1 | - |
| exon-exon | TRAV23DV6 | 14 | + | TRAJ24 | | + |
| exon-exon | CCDC134 | 22 | + | ZNF75A | 16 | + |
| exon-exon | RNA45SN3 | 21 | + | HNRNPK | 9 | - |
| exon-exon | MALAT1 | 11 | + | LDAH | 2 | - |
| exon-intron | RNA45SN3 | 21 | + | RPL23AP42 | 3 | - |
| exon-exon | IGHJ2 | 14 | - | IGHG1 | 14 | - |
| exon-exon | TGOLN2 | 2 | - | COPA | 1 | - |
| intron-exon | LOC105378878 | | - | AMY1B | 1 | - |
| exon-exon | LOC107985997 | | + | SP110 | 2 | + |
| exon-exon | IGLV2-11 | 22 | + | IGLC2 | 22 | + |
| exon-exon | RNA45SN3 | 21 | + | TMEM192 | 4 | - |
| intron-exon | TRA | 14 | + | TRAC | 14 | + |
| intron-exon | IGK | 2 | + | IGKV1-39 | 2 | - |
| exon-intron | IGKV1-9 | 2 | - | IGK | 2 | - |
| exon-intron | IGLV3-1 | 22 | + | IGL | 22 | + |
| exon-exon | NEDD8-MDP1 | 14 | - | NDRG1 | 8 | - |
| exon-exon | IGLV2-14 | 22 | + | IGLL5 | 22 | + |
| exon-intron | IGLV1-47 | 22 | + | IGL | 22 | + |
| exon-exon | IGLV2-23 | 22 | + | IGLL5 | 22 | + |
| exon-exon | IGLV2-18 | | + | IGLL5 | 22 | + |
| exon-exon | TMED10 | 14 | - | HSPA8 | 11 | - |
| intron-exon | IGK | 2 | + | IGKV2-28 | 2 | - |
| exon-exon | MYL12A | 18 | + | PRMT5 | 14 | - |
| exon-exon | TRAV26-2 | 14 | + | TRAJ52 | 14 | + |
| exon-exon | TRAJ12 | | + | TRAC | 14 | + |
| exon-intron | IGKV3D-15 | 2 | + | IGK | 2 | - |
| exon-intron | IGKV1-33 | 2 | - | IGKC | 2 | - |
| exon-intron | FAM151B | | - | AC008771.1 | 5 | - |
| exon-exon | RNA45SN1 | 21 | + | SFXN1 | 5 | + |
| exon-intron | RNA45SN2 | 21 | + | RNR2 | MT | + |
| intron-exon | RNR2 | MT | + | IGKC | 2 | - |
| exon-exon | LPAR5 | 12 | - | RPL3 | 22 | - |
| exon-exon | IGLV1-36 | 22 | + | IGLC2 | 22 | + |
| exon-exon | IGLV3-10 | | + | IGLC2 | 22 | + |
| exon-exon | LOC101929657 | 13 | - | NEK5 | 13 | - |
| exon-intron | IGHV3-15 | | - | IGH | 14 | - |
| exon-intron | RNA45SN3 | 21 | + | LOC112267872 | 19 | - |
| exon-intron | IGKV2D-40 | | + | IGK | 2 | + |
| exon-exon | TADA1 | 1 | - | EBF1 | 5 | - |
| exon-exon | RNA45SN1 | 21 | + | SLC4A8 | | + |
| exon-exon | RNA45SN2 | 21 | + | COX3 | MT | + |
| exon-intron | TRAV39 | | + | TRA | 14 | + |
| exon-exon | RNA45SN2 | 21 | + | HHEX | 10 | + |
| exon-exon | IGKV1-5 | 2 | - | IGKC | 2 | - |
| exon-exon | IGHG3 | 14 | - | IGHG1 | 14 | - |
| intron-exon | RNA28SP | 21 | + | HSP90AB1 | 6 | + |
| intron-exon | FAM111A | | - | FAM111A-DT | | - |
| intron-exon | PSMD14 | 2 | + | MAPK6 | 15 | + |
| intron-exon | LOC105378878 | | - | AMY1B | 1 | - |
| exon-exon | LOC105378878 | | - | AMY1B | 1 | - |
| exon-intron | MTCH2 | 11 | - | LLGL2 | 17 | + |
| exon-exon | FCRL1 | 1 | - | ILF2 | 1 | - |
| exon-intron | IGKV3D-15 | 2 | + | IGK | 2 | - |
| intron-exon | IGH | 14 | - | IGHV1-3 | 14 | - |
| exon-exon | IGLV2-11 | 22 | + | IGLL5 | 22 | + |
| intron-exon | LOC105378878 | | - | AMY1B | 1 | - |
| exon-exon | RNA45SN3 | 21 | + | HERPUD1 | 16 | + |
| exon-exon | IGHV3-64D | 14 | - | IGHG1 | 14 | - |
| exon-intron | IGKV1-39 | 2 | - | IGK | 2 | - |
| exon-exon | RNA45SN3 | 21 | + | BCAS2 | 1 | - |
| exon-intron | IGKV3D-15 | 2 | + | IGK | 2 | - |
| exon-exon | IGHV3-13 | 14 | - | IGHG1 | 14 | - |
| intron-exon | COX10-AS1 | 17 | - | LOC100506974 | | - |
| exon-intron | RN7SK | 6 | + | NHS | X | + |
| intron-exon | IGK | 2 | + | IGKV1-27 | 2 | - |
| exon-exon | IGLV2-14 | 22 | + | IGLL5 | 22 | + |
| exon-exon | LINC01507 | | + | LOC107987084 | | + |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| exon-exon | TRAV4 | 14 | + | TRAV5 | 14 | + |
| exon-intron | FAM66B | 8 | - | FAM90A20P | 8 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGK | 2 | + | IGKV3-15 | 2 | - |
| exon-exon | C1GALT1C1 | | - | MCTS1 | | - |
| exon-exon | RNA45SN1 | 21 | + | LOC730098 | | - |
| exon-intron | AMZ2 | 17 | - | AMZ2 | 17 | + |
| intron-exon | LOC105373456 | | + | ERICH1 | 8 | - |
| exon-exon | RNA45SN3 | 21 | + | EIF1 | 17 | + |
| intron-exon | MECOM | 3 | - | SHISA5 | 3 | - |
| exon-exon | SLC40A1 | 2 | + | SLC40A1 | 2 | - |
| exon-exon | SMR3A | | + | SMR3B | | + |
| exon-exon | RASA4 | 7 | - | RASA4B | 7 | - |
| exon-exon | PPP2CA | 5 | + | PPP2CA | 5 | - |
| exon-exon | PARL | 3 | - | PARL | 3 | + |
| exon-exon | MALAT1 | 11 | + | LINC02009 | | - |
| intron-exon | GNB4 | 3 | - | RPP38 | 10 | + |
| exon-exon | R3HDM2 | 12 | - | SMARCE1 | | - |
| exon-exon | LCN1 | 9 | + | HECA | 6 | + |
| exon-exon | RNA45SN2 | 21 | + | IGHA1 | 14 | - |
| intron-exon | LOC101927293 | | + | LYZ | 12 | + |
| intron-exon | 7SK | | + | DDX17 | 22 | - |
| exon-exon | LACRT | 12 | - | PINK1 | 1 | + |
| intron-exon | LOC107987206 | 14 | + | ERBB3 | 12 | + |
| exon-exon | ATP8 | MT | - | ARHGAP45 | 19 | + |
| exon-exon | BACE1 | 11 | - | RNF214 | 11 | - |
| intron-exon | IDI2-AS1 | 10 | + | STK40 | 1 | + |
| exon-exon | PRDX1 | 1 | + | TNFAIP3 | 6 | - |
| exon-exon | SRM | 1 | + | RPS9 | 19 | - |
| intron-exon | SYN1 | X | - | DUSP3 | 17 | + |
| exon-exon | MAPK1 | 22 | - | PACS1 | 11 | + |
| intron-exon | SMUG1 | | + | NCKAP1L | 12 | + |
| exon-exon | GIT2 | 12 | - | GOLGA8B | 15 | - |
| intron-exon | MIGA2 | | - | MIGA2 | 9 | + |
| exon-exon | PLEC | 8 | + | PLEC | 8 | - |
| exon-intron | RPL37A | 2 | + | NARS2 | 11 | + |
| exon-intron | CDC7 | 1 | + | ZNF529 | 19 | - |
| exon-exon | COX3 | MT | + | ATP6 | MT | + |
| exon-intron | SKA2 | 17 | - | SPRY4-AS1 | 5 | + |
| exon-intron | RPL34 | 4 | + | TRND | MT | + |
| exon-exon | QSOX1 | 1 | - | QSOX1 | 1 | + |
| exon-exon | RPN2 | 20 | + | MED15 | 22 | + |
| exon-exon | ZNF207 | 17 | + | IL4R | 16 | + |
| exon-exon | PICALM | 11 | - | CPQ | 8 | + |
| exon-exon | TMED2 | 12 | + | WLS | 1 | - |
| exon-exon | PLOD3 | 7 | + | PLOD3 | 7 | - |
| exon-exon | QSOX1 | 1 | - | QSOX1 | 1 | + |
| intron-exon | EREG | 4 | - | LOC105377276 | 4 | - |
| exon-exon | ANXA1 | 9 | + | ARPC3 | 12 | - |
| intron-exon | IGFBP7-AS1 | 4 | + | IGFBP7 | 4 | - |
| exon-exon | ADPGK | 15 | + | ADPGK | 15 | - |
| exon-exon | SLC25A3 | 12 | - | SLC25A3 | 12 | + |
| intron-exon | LOC643711 | 12 | + | ANXA5 | 4 | - |
| exon-exon | AKR1C3 | 10 | + | AKR1C4 | 10 | + |
| intron-exon | ZBTB38 | 3 | - | ZBTB38 | 3 | + |
| exon-exon | SFT2D1 | 6 | + | SFT2D1 | 6 | - |
| intron-exon | IGH | 14 | + | RPS8P8 | 5 | + |
| exon-exon | COL3A1 | 2 | + | CHST12 | 7 | + |
| exon-exon | PPP6R2 | 22 | + | SQSTM1 | 5 | + |
| exon-exon | FTH1 | 11 | - | CAPNS1 | 19 | + |
| exon-exon | CD63 | 12 | - | RPS5 | 19 | + |
| exon-exon | HINT1 | 5 | + | RPL10A | 6 | + |
| exon-exon | S100A6 | 1 | + | RPL17 | 18 | - |
| exon-intron | TMSB4X | X | - | SLC27A4 | 9 | + |
| intron-exon | FTLP3 | 20 | - | FTL | 19 | + |
| exon-exon | GREM1 | 15 | + | TP53RK | 20 | - |
| exon-exon | MIR12136 | 1 | - | RPL13A | 19 | + |
| intron-exon | PTPRG | 3 | + | RPL10A | 6 | + |
| exon-intron | MXRA7P1 | 2 | - | PSMD14 | 2 | - |
| exon-exon | KCNK2 | 1 | + | TMBIM6 | 12 | + |
| exon-intron | RPL41P1 | 20 | - | LOC643339 | 12 | - |
| exon-intron | ND3 | MT | - | PLEKHA7 | 11 | - |
| exon-intron | RPS24 | 10 | - | LINC02067 | 3 | - |
| exon-exon | MIR4435-2HG | 2 | + | TRIOBP | 22 | + |
| exon-exon | CENPU | 4 | - | PRIMPOL | 4 | + |
| exon-exon | ND3 | MT | - | SLMO2-ATP5E | 20 | - |
| intron-exon | LOC102724948 | 2 | + | NDUFAF2 | 5 | + |
| intron-exon | GOLGA3 | 12 | - | RPS11 | 19 | + |
| exon-exon | NDUFC2-KCTD14 | 11 | + | FAU | 11 | - |
| exon-exon | LOC107985802 | 2 | + | COX7B | X | + |
| exon-exon | IFITM2 | 11 | - | IFITM3 | 11 | - |
| exon-exon | RPL23 | 17 | + | RPL23 | 17 | - |
| exon-exon | MRPL40 | 22 | + | FSTL1 | 3 | - |
| exon-exon | TP53INP1 | 8 | - | PKM | 15 | - |
| exon-exon | MXD4 | 4 | + | MXD4 | 4 | - |
| exon-exon | MLKL | 16 | - | QSOX1 | 1 | + |
| exon-exon | AP2M1 | 3 | + | NPEPPSP1 | 17 | - |
| exon-exon | CALU | 7 | - | TRIAP1 | 12 | - |
| intron-exon | EPHB4 | 7 | + | SLC12A9 | 7 | + |
| exon-exon | ND5 | MT | + | ND1 | MT | + |
| exon-exon | ZNF551 | 19 | - | ZNF551 | 19 | + |
| exon-exon | CECR7 | 22 | + | IL17RA | 22 | + |
| exon-exon | DAAM1 | 14 | + | MFHAS1 | 8 | - |
| intron-exon | LOC105371050 | 16 | - | CCNF | 16 | + |
| exon-exon | PRPF8 | 17 | + | PRPF8 | 17 | - |
| exon-exon | NFATC3 | 16 | - | NFATC3 | 16 | + |
| exon-exon | FOXP1 | 3 | + | FOXP1 | 3 | - |
| exon-exon | DAAM1 | 14 | - | DAAM1 | 14 | + |
| exon-exon | ASAP1 | 8 | + | ASAP1 | 8 | - |
| exon-exon | TNPO2 | 19 | + | TNPO2 | 19 | - |
| exon-exon | TRPS1 | 8 | - | WWC3 | X | + |
| exon-intron | TMEM249 | 8 | + | FBXL6 | 8 | + |
| intron-exon | C5orf66 | 5 | + | MACROH2A1 | 5 | - |
| exon-exon | PTBP3 | 9 | + | PTBP3 | 9 | - |
| exon-exon | PPP1CB | 2 | - | PPP1CB | 2 | + |
| exon-intron | NAP1L1 | 12 | + | ARL10 | 5 | + |
| exon-exon | PURA | 5 | - | ARPC5L | 9 | + |
| intron-exon | C5orf66 | 5 | + | MACROH2A1 | 5 | - |
| exon-exon | FAM120AOS | 9 | + | FAM120AOS | 9 | - |
| intron-exon | MEG3 | 14 | + | MEG8 | 14 | + |
| exon-exon | CDIPT | 16 | + | CDIPT | 16 | - |
| exon-exon | ACTN4 | 19 | - | ACTN4 | 19 | + |
| exon-intron | LOC100421518 | 6 | - | TTLL2 | 6 | - |
| intron-exon | RAB3GAP2 | 1 | + | MORF4L1P1 | 1 | + |
| intron-exon | TMEM140 | 7 | + | CYREN | 7 | + |
| exon-exon | NPIPB4 | 16 | - | NPIPB3 | 16 | - |
| exon-intron | SEPTIN7 | 7 | + | SEPTIN7P3 | 7 | + |
| intron-exon | AC008750.3 | | - | VSIG10L | | - |
| exon-intron | VSIG10L | | + | AC008750.3 | | + |
| exon-exon | KIF13B | 8 | - | COX1 | MT | + |
| exon-exon | ND1 | MT | + | BAIAP2 | 17 | + |
| intron-exon | PMS2P4 | 7 | - | ND4 | MT | + |
| exon-exon | SLC19A3 | 2 | - | SFPQ | 1 | - |
| intron-exon | AC010754.1 | | - | LOC107985181 | | - |
| exon-intron | ND4 | MT | + | LOC102724843 | 21 | + |
| exon-exon | ND4L | MT | + | ND4 | MT | + |
| exon-exon | COX1 | MT | + | PLP1 | X | + |
| exon-intron | COX1 | MT | + | ABCC4 | | + |
| exon-exon | ND4 | MT | + | RHOB | 2 | + |
| exon-intron | ATP6 | MT | - | MTATP6P1 | 1 | + |
| exon-intron | LYPLA2 | | + | LGR5 | 12 | + |
| exon-intron | TNFRSF10A | 8 | - | TNFRSF10A-AS1 | 8 | - |
| exon-intron | ND6 | MT | + | CYTB | MT | + |
| intron-exon | SMU1 | 9 | - | FAHD1 | 16 | + |
| intron-exon | AC004784.1 | 19 | + | PSG2 | 19 | + |
| exon-exon | CGA | 6 | + | ZNF397 | 18 | - |
| intron-exon | LINC01829 | 2 | - | LINC01828 | 2 | - |
| exon-exon | GGACT | 13 | - | PCCA | 13 | - |
| intron-exon | RNASEH2B-AS1 | 13 | + | RNASEH2B | 13 | + |
| exon-exon | GUK1 | 1 | - | CGA | 6 | - |
| exon-exon | UQCR11 | 19 | + | SUGP2 | 19 | + |
| exon-intron | LOC100131868 | | + | AC024560.2 | 3 | + |
| exon-exon | PTMS | 12 | - | RNA45SN2 | 21 | - |
| exon-exon | ND1 | MT | - | CCNK | 14 | - |
| intron-exon | CFAP92 | 3 | + | EFCC1 | 3 | + |
| exon-exon | ALDOA | 16 | + | ACTA1 | 1 | - |
| intron-exon | SLC14A2 | 18 | + | ANXA6 | 5 | - |
| exon-exon | PKM | 15 | - | BASP1 | 5 | + |
| exon-exon | MFAP3L | 4 | - | AADAT | 4 | - |
| exon-exon | RASL11B | 4 | + | VIM | 10 | + |
| intron-exon | RBKS | 2 | + | BABAM2 | 2 | + |
| intron-exon | LOC108167315 | | - | POMC | | - |
| exon-intron | LINC00222 | | + | ZNF259P1 | | + |
| exon-intron | CORO2A | 9 | - | IPPK | 9 | + |
| intron-exon | FAT3 | 11 | + | ND4 | MT | + |
| exon-intron | STOM | 9 | - | PRRC2C | 1 | + |
| exon-exon | LOC101927829 | | + | LOC105376987 | | + |
| intron-exon | FAM172A | 5 | + | ND2 | MT | + |
| exon-exon | RACK1 | 5 | - | RACK1 | 5 | + |
| exon-exon | RPS21 | 20 | - | AUP1 | 2 | - |
| exon-intron | FBXO31 | 16 | - | AC010531.1 | | - |
| exon-exon | MFSD9 | 2 | + | MFSD9 | 2 | - |
| exon-intron | KDM5C | X | - | KANTR | X | - |
| exon-intron | ATP6 | MT | - | RAPGEF2 | | + |
| exon-intron | ZNF44 | 19 | + | LOC105372859 | | - |
| exon-intron | CALM1 | 14 | - | ABI2 | 2 | - |
| exon-intron | CRYZL1 | 21 | - | DMC1 | | + |
| intron-exon | AL050404.1 | | + | KCNG1 | | + |
| exon-intron | LOC105371356 | | + | LINC01229 | 16 | + |
| exon-intron | TEKT4P2 | 21 | - | CR381670.1 | 21 | - |
| intron-exon | LARP7 | 4 | - | ZGRF1 | | - |
| exon-intron | EXPH5 | 11 | - | TMEM189-UBE2V1 | 20 | - |
| exon-intron | DDX21 | 10 | + | GAPDHP1 | X | - |
| exon-exon | LOC100287489 | | - | CGB8 | | - |
| exon-exon | MYH9 | 22 | + | MYH9 | 22 | - |
| exon-intron | LOC105378798 | | - | AL583808.1 | | - |
| exon-exon | TUBA1A | 12 | - | TUBA1B | 12 | - |
| exon-exon | ABCA2 | 9 | - | LOC729218 | 4 | + |
| exon-exon | TMBIM6 | 12 | + | INPP1 | 2 | + |
| intron-exon | SERHL2 | 22 | - | ND1 | MT | + |
| exon-exon | CYTB | MT | + | SECISBP2L | 15 | - |
| exon-exon | YWHAZ | 8 | - | ENTR1 | 9 | - |
| exon-exon | MDH1 | 2 | + | CTNNA1 | 5 | + |
| exon-exon | SQSTM1 | 5 | - | SQSTM1 | 5 | + |
| exon-exon | NDRG2 | 14 | - | RPL38 | 17 | + |
| intron-exon | TRNE | MT | - | RPS3P3 | 3 | + |
| intron-exon | KRIT1 | | - | TMEM59 | 1 | - |
| intron-exon | ARPIN-AP3S2 | 15 | - | ND4 | MT | + |
| intron-exon | MTCO1P12 | 1 | + | DDX27 | 20 | + |
| exon-exon | LONRF2 | 2 | - | ATP5MD | 10 | - |
| exon-exon | ECT2L | 6 | + | ZEB1 | 10 | + |
| exon-exon | CAST | 5 | + | UQCRQ | 5 | + |
| exon-exon | IQSEC1 | 3 | - | UCHL1 | 4 | + |
| exon-exon | PEBP1 | 12 | + | AMIGO1 | 1 | - |
| exon-intron | CHKA | 11 | - | INCA1 | 17 | + |
| exon-exon | CACNA1F | X | + | CACNA1F | X | - |
| exon-exon | LOC729086 | 1 | - | CDC42BPB | 14 | + |
| exon-exon | EPHA1 | 7 | - | BUD23 | 7 | - |
| exon-intron | HP1BP3 | 1 | + | RORA | 15 | + |
| intron-exon | LRIG2-DT | | - | SLC16A1-AS1 | | - |
| exon-exon | GTF2H5 | | - | GTF2H5 | 6 | + |
| exon-exon | ZNF280D | 15 | + | ZNF280D | 15 | - |
| exon-exon | LCN1 | 9 | + | LYZ | 12 | + |
| exon-exon | PLIN5 | | + | PLIN5 | | - |
| intron-exon | RNF31 | 14 | + | LYZ | 12 | + |
| exon-exon | SMARCA1 | X | - | SMARCA1 | X | + |
| intron-exon | DPM1 | 20 | - | UBE2G2 | | - |
| exon-exon | EXOSC7 | 3 | + | PRH1-PRR4 | 12 | - |
| exon-exon | RNA45SN3 | 21 | - | RAB3GAP2 | 1 | - |
| intron-exon | AUTS2 | 7 | + | RRAGA | 9 | + |
| intron-exon | IGH | 14 | - | IGHA1 | 14 | - |
| exon-exon | PLCG1 | 20 | - | FRMD8 | 11 | - |
| intron-exon | INHBA-AS1 | 7 | + | INHBA | 7 | + |
| intron-exon | NMNAT2 | 1 | - | LAMC2 | 1 | - |
| exon-exon | RPLP2 | 11 | - | RNA45SN1 | 21 | - |
| exon-exon | PSMC5 | 17 | - | PSD3 | 8 | + |
| exon-intron | GNAI2 | 3 | - | DDN-AS1 | 12 | + |
| exon-exon | ETS2 | 21 | - | ETS2 | 21 | + |
| intron-exon | LASTR | 10 | - | TRAF3IP1 | 2 | + |
| exon-exon | LASP1 | 17 | + | LASP1 | 17 | - |
| exon-exon | SLC38A5 | X | + | MRPS34 | 16 | + |
| exon-exon | TINAGL1 | 1 | - | TACC2 | 10 | - |
| exon-intron | COG8 | 16 | - | VPS4A | 16 | - |
| intron-exon | TRIM33 | 1 | - | PPM1K | 4 | - |
| exon-exon | HMGN3 | 6 | - | RXYLT1 | 12 | + |
| intron-exon | MLLT6 | 17 | - | LOC105371763 | | - |
| exon-exon | GAPDH | 12 | - | SNX6 | 14 | - |
| exon-intron | BAD | 11 | - | PHACTR4 | 1 | - |
| exon-exon | RPL34P33 | | - | RPL34P34 | 19 | - |
| intron-exon | LOC105371114 | 16 | - | SYT17 | 16 | - |
| exon-intron | FITM2 | 20 | - | IFT52 | 20 | - |
| exon-exon | BPNT1 | 1 | + | RCAN2 | 6 | - |
| exon-exon | SENP1 | 12 | - | MSRB3 | 12 | + |
| exon-exon | TNRC6C | 17 | - | NOTCH2 | 1 | + |
| intron-exon | USP2 | 11 | + | USP2-AS1 | 11 | + |
| exon-exon | TOB2 | 22 | + | TOB2 | 22 | - |
| intron-exon | AC007637.1 | | + | ACACB | | + |
| exon-exon | ADI1 | 2 | + | ADI1 | 2 | - |
| exon-exon | LOC107986131 | | + | LINC02021 | 3 | + |
| exon-exon | UBR4 | 1 | - | ZMYM2 | 13 | + |
| exon-exon | INS-IGF2 | 11 | + | RPS13 | 11 | - |
| exon-exon | CMIP | 16 | - | CMIP | 16 | + |
| exon-exon | CHD1L | 1 | + | XPOT | 12 | + |
| exon-exon | C7orf26 | | - | KLK14 | | - |
| exon-exon | HSP90AA1 | 14 | - | PCDHB5 | 5 | + |
| intron-exon | HGSNAT | 8 | - | HGSNAT | 8 | + |
| exon-exon | ACTG1 | 17 | + | COL5A1 | 9 | + |
| exon-exon | TRA2B | 3 | - | KIFC1 | 6 | + |
| intron-exon | TRB | 7 | + | TRBC2 | 7 | + |
| exon-exon | TRBJ2-1 | 7 | + | TRBC1 | 7 | + |
| exon-exon | PDCL | 9 | - | ADH5 | 4 | - |
| exon-exon | ALAS1 | 3 | - | ALAS1 | 3 | + |
| exon-exon | DBIL5P | | + | PRR36 | | - |
| exon-exon | TRIM39-RPP21 | 6 | - | METTL2B | | + |
| exon-exon | RNA45SN2 | 21 | + | ARF6 | 14 | + |
| exon-exon | DDX21 | 10 | + | CUTA | 6 | - |
| exon-exon | AIMP1 | 4 | + | ZC3H13 | 13 | - |
| exon-exon | HNRNPU | 1 | + | HNRNPU | 1 | - |
| exon-exon | NPIPB3 | 16 | + | HNRNPU | 1 | - |
| exon-intron | RRBP1 | 20 | - | NPTN | 15 | + |
| exon-exon | HNRNPA2B1 | 7 | - | AUTS2 | 7 | + |
| exon-exon | MYADM | 19 | - | APOBEC3F | | - |
| intron-exon | RNF24 | 20 | + | LRRC58 | 3 | + |
| exon-exon | HNRNPA1P48 | 16 | + | GATA3 | | + |
| exon-exon | RNA45SN2 | 21 | + | GATA3 | | + |
| exon-exon | RNA45SN1 | 21 | + | TSSK6 | 19 | - |
| exon-exon | SNX9 | 6 | - | SNX9 | 6 | + |
| exon-exon | ABCA2 | 9 | + | ABCA2 | | - |
| exon-exon | TPM2 | 9 | - | FAH | 15 | + |
| exon-exon | EEF2 | 19 | + | EEF2 | 19 | - |
| exon-exon | DCAKD | 17 | - | GTF2H4 | 6 | + |
| intron-exon | AHCY | 20 | - | MSMO1 | 4 | + |
| exon-exon | APIP | 11 | + | APIP | | - |
| exon-intron | HK1 | 10 | + | SPDYE10P | 7 | + |
| exon-exon | RABGGTB | 1 | - | RABGGTB | 1 | + |
| intron-exon | DHRSX | Y | - | POLE3 | 9 | - |
| exon-intron | CA14 | | - | AC242988.1 | | - |
| exon-exon | JUNB | 19 | - | HOOK2 | 19 | - |
| exon-intron | RNU6-3P | X | - | TEX9 | 15 | + |
| exon-intron | RPARP-AS1 | 10 | + | MFSD13A | 10 | + |
| exon-exon | NOMO3 | | - | NOMO1 | 16 | + |
| intron-exon | AL162411.1 | 9 | + | RNF2P1 | 9 | + |
| intron-exon | ADAMTSL2 | | + | LOXL2 | 8 | - |
| intron-exon | MAP3K20 | 2 | + | TMEM129 | | - |
| exon-exon | ZNF207 | 17 | - | ZNF207 | 17 | + |
| exon-intron | LOC283335 | 12 | - | EIF4B | 12 | - |
| exon-intron | LOC105375567 | 7 | - | TMEM176B | 7 | - |
| exon-exon | M6PR | 12 | - | PHC1 | 12 | + |
| exon-exon | COL4A5 | X | + | MDK | 11 | + |
| exon-exon | DFFA | 1 | - | FLJ30901 | 22 | - |
| intron-exon | YJEFN3 | 19 | + | SRRM2 | 16 | + |
| exon-exon | NASP | 1 | + | LUC7L3 | 17 | + |
| exon-exon | NDUFB11 | X | - | NASP | 1 | + |
| exon-exon | NASP | 1 | + | NOP56 | 20 | + |
| exon-exon | ANKRD12 | 18 | + | SMCHD1 | 18 | + |
| exon-exon | EIF3B | 7 | - | EIF3B | 7 | + |
| intron-exon | LOC101927080 | | + | PHKB | 16 | + |
| intron-exon | TP53I11 | 11 | - | PGM3 | 6 | - |
| exon-exon | LOC646762 | 7 | - | LOC105375213 | | - |
| exon-exon | PRDX1 | 1 | + | PRDX1 | 1 | - |
| intron-exon | ZBTB45 | 19 | - | ZBTB45 | 19 | + |
| exon-intron | EMILIN1 | 2 | + | RPL3P9 | 8 | - |
| exon-exon | MYO18A | 17 | + | MYO18A | 17 | - |
| exon-exon | SMIM11A | 21 | + | COX11 | 17 | - |
| exon-exon | SPARC | 5 | + | SPARC | 5 | - |
| intron-exon | PCF11 | 11 | + | KIAA1958 | 9 | + |
| exon-intron | LOC101928948 | | + | AC105916.1 | | + |
| exon-exon | COX1 | MT | + | ACTR1B | | - |
| exon-exon | RPL11 | 1 | + | TMCO6 | 5 | + |
| exon-exon | RPL18 | 19 | - | LGMN | 14 | - |
| intron-exon | RANBP2 | 2 | + | TUBB | 6 | + |
| intron-exon | PBX1 | 1 | + | RPL17 | 18 | - |
| exon-exon | IVNS1ABP | 1 | - | RPL19P4 | | + |
| exon-exon | PUS7 | | - | PTMA | 2 | + |
| exon-exon | RPL7P9 | 1 | - | MSX2 | 5 | + |
| exon-exon | RPS17 | 15 | + | RPS17 | 15 | - |
| exon-exon | RPS28P7 | 11 | - | CAMTA1 | 1 | + |
| intron-exon | FAM135A | 6 | + | NACA | 12 | - |
| exon-exon | RPS5 | 19 | - | RPS5 | 19 | + |
| exon-exon | GOLGA5 | 14 | - | GOLGA5 | 14 | + |
| intron-exon | RNR1 | MT | + | YIPF3 | 6 | - |
| intron-exon | METTL4 | 18 | - | RPS14 | 5 | - |
| intron-exon | HNRNPH3 | 10 | + | RPL31P49 | | + |
| exon-exon | PTMA | 2 | - | ATP6V0B | 1 | + |
| exon-exon | SLC12A2 | 5 | + | LINC01184 | 5 | - |
| exon-exon | RNA45SN3 | 21 | + | ACTB | 7 | - |
| intron-exon | RP11-120D5.1 | X | - | MID1 | X | - |
| intron-exon | DLGAP1 | 18 | - | PDPR | 16 | + |
| exon-exon | RNA45SN2 | 21 | + | MRPS26 | | + |
| exon-exon | EIF3E | 8 | + | EIF3E | 8 | - |
| exon-exon | CAP1 | 1 | - | CAP1 | 1 | + |
| exon-exon | H2AZ1 | 4 | - | RBPMS2 | 15 | - |
| exon-exon | RNA45SN3 | 21 | + | JMJD7-PLA2G4B | 15 | + |
| exon-exon | RNA45SN3 | 21 | + | WBP11 | | - |
| exon-exon | FREM2 | 13 | - | FREM2 | | + |
| exon-exon | PABPC1 | 8 | + | COX1 | MT | + |
| exon-exon | TAGLN | 11 | + | FKBPL | 6 | - |
| exon-intron | DPY30 | 2 | - | CORIN | 4 | - |
| intron-exon | TNKS2-AS1 | | + | TNKS2 | 10 | + |
| exon-exon | TDGF1P3 | X | + | TDGF1 | 3 | + |
| exon-exon | RNA45SN2 | 21 | + | HIVEP1 | 6 | + |
| exon-intron | RNA45SN3 | 21 | + | HPN-AS1 | | - |
| intron-exon | MTCO3P12 | 1 | - | COX3 | MT | + |
| exon-exon | TPM1 | 15 | - | TPM1 | 15 | + |
| intron-exon | RNR2 | MT | + | CPNE1 | 20 | - |
| intron-exon | LOC108178983 | | - | SLC5A12 | | - |
| intron-exon | LOC107985165 | 18 | + | LOC105371953 | 18 | + |
| exon-intron | KIAA1841 | 2 | + | DDX58 | 9 | - |
| exon-exon | TMEM158 | 3 | + | TMEM158 | 3 | - |
| exon-exon | RNF126 | 19 | - | TSPAN4 | 11 | + |
| exon-exon | STAU2 | 8 | + | STAU2 | 8 | - |
| exon-exon | TPM4 | 19 | + | INAFM1 | 19 | + |
| exon-exon | RNA45SN3 | 21 | + | CYTB | MT | + |
| intron-exon | RN7SL5P | | + | SH3PXD2B | 5 | - |
| exon-exon | TUBG1 | 17 | - | TUBG1 | 17 | + |
| exon-exon | CYTB | MT | + | MFSD10 | | - |
| exon-exon | ANKRD11 | 16 | - | FAU | 11 | - |
| exon-exon | COX1 | MT | + | TPM4 | 19 | + |
| exon-exon | UQCRC1 | 3 | - | RPL13AP25 | 13 | - |
| exon-exon | USP5 | 12 | - | CDCA3 | | - |
| intron-exon | RNR2 | MT | + | RPL21P16 | 10 | - |
| exon-exon | YWHAB | 20 | - | YWHAB | 20 | + |
| exon-exon | FGFR1 | 8 | - | RAD23A | 19 | + |
| exon-exon | RNA45SN2 | 21 | + | SLC25A29 | 14 | - |
| exon-intron | YY1 | 14 | - | AL133523.1 | | - |
| intron-exon | RNR1 | MT | + | COX3 | MT | + |
| exon-exon | RNA45SN2 | 21 | + | EPRS1 | 1 | - |
| intron-exon | MOSPD3 | 7 | + | COX3 | MT | + |
| exon-exon | RPL7L1 | 6 | + | MXRA7 | 17 | - |
| exon-exon | ATP6V0C | 16 | + | CHD4 | 12 | - |
| exon-exon | SDCBP | 8 | - | SDCBP | 8 | + |
| intron-exon | RNR2 | MT | + | COX1 | MT | + |
| exon-exon | SRSF10 | 1 | - | HDAC2 | 6 | - |
| exon-exon | KDELR1 | 19 | - | AK7 | 14 | + |
| exon-exon | SNRNP200 | 2 | + | SNRNP200 | 2 | - |
| intron-exon | RNR2 | MT | + | COX3 | MT | + |
| exon-exon | TRIM32 | 9 | + | DDX21 | 10 | + |
| exon-intron | COL2A1 | 12 | - | CTA-204B4.2 | 8 | - |
| intron-exon | TRNC | MT | + | AMZ2 | 17 | + |
| exon-intron | FECH | 18 | - | AC016727.1 | 2 | + |
| exon-exon | PTBP3 | 9 | + | PTBP3 | 9 | - |
| exon-intron | CHD4 | 12 | - | LOC102724960 | | - |
| exon-exon | OPLAH | | - | OPLAH | 8 | + |
| exon-intron | LOC729291 | | - | CCDC91 | 12 | - |
| exon-exon | RNA45SN3 | 21 | + | PHGDH | 1 | + |
| exon-exon | CAPN12 | 19 | - | ACTN4 | 19 | + |
| intron-exon | STT3A-AS1 | 11 | - | EI24 | 11 | + |
| exon-exon | SNX2 | 5 | + | B4GALT5 | 20 | - |
| exon-exon | S100A13 | 1 | + | S100A13 | 1 | - |
| exon-exon | ZDBF2 | | + | SEPTIN2 | 2 | + |
| exon-exon | SEPTIN2 | 2 | - | SEPTIN2 | 2 | + |
| exon-exon | STK17A | 7 | + | TMEM123 | 11 | - |
| exon-exon | MAN2A1 | 5 | - | MAN2A1 | 5 | + |
| intron-exon | SLC12A9 | 7 | - | EPHB4 | 7 | - |
| exon-intron | FABP3 | 1 | - | ZCCHC17 | 1 | - |
| intron-exon | SAMD11 | 1 | + | FADS2 | 11 | + |
| exon-intron | TPTEP2-CSNK1E | 22 | + | TPTEP2-CSNK1E | 22 | - |
| intron-exon | MIR924HG | 18 | - | SLC7A11 | 4 | - |
| exon-exon | SSR4 | X | - | IDH3G | X | - |
| exon-exon | PHACTR2 | 6 | + | PHACTR2 | 6 | - |
| exon-exon | ZNF423 | 16 | + | ZNF423 | 16 | - |
| exon-exon | HNRNPA0 | 5 | - | SF1 | 11 | - |
| exon-exon | FUS | 16 | + | NMNAT2 | 1 | - |
| intron-exon | MTCL1 | 18 | + | RBM25 | 14 | + |
| exon-intron | RNA45SN3 | 21 | + | ATP5F1C | 10 | + |
| exon-exon | PODXL | 7 | - | C5orf38 | 5 | + |
| intron-exon | ARPC5 | 1 | + | RGL1 | 1 | + |
| intron-exon | RNA18SP5 | 21 | + | NDUFA11 | 19 | - |
| exon-exon | CFL1 | 11 | - | EED | 11 | + |
| exon-exon | HSPE1-MOB4 | 2 | + | HSF1 | 8 | + |
| exon-intron | RNA45SN2 | 21 | + | LOC100505501 | | + |
| exon-exon | CDC42EP3 | 2 | + | CDC42EP3 | 2 | - |
| exon-exon | POM121 | 7 | - | EPRS1 | 1 | - |
| exon-exon | SLC25A1 | 22 | + | SLC25A1 | 22 | - |
| exon-exon | RPL28 | 19 | + | RNA45SN2 | 21 | + |
| exon-exon | MALAT1 | 11 | + | HSP90B1 | 12 | + |
| exon-intron | HNRNPA1P10 | 19 | + | AC008543.1 | | + |
| exon-exon | H2BC9 | 6 | + | HNRNPA1 | 12 | + |
| exon-exon | RNA45SN2 | 21 | + | NBEAL2 | 3 | + |
| exon-intron | CDK4 | 12 | - | ARV1 | 1 | - |
| intron-exon | LOC105371371 | 16 | + | SLC38A1 | 12 | - |
| exon-exon | WIZ | 19 | + | WIZ | 19 | - |
| exon-exon | RPL39P3 | 6 | + | RAB15 | | - |
| exon-exon | RNA45SN2 | 21 | + | RPL15 | 3 | + |
| exon-exon | LOC100287653 | 12 | + | FRA10AC1 | 10 | - |
| exon-exon | GAN | 16 | - | GAN | 16 | + |
| exon-exon | PHIP | 6 | + | PHIP | 6 | - |
| exon-exon | HDLBP | 2 | - | UNC13A | 19 | - |
| exon-exon | RNA45SN2 | 21 | + | RPLP1P4 | | - |
| exon-exon | RNA45SN1 | 21 | + | ACTB | 7 | - |
| exon-exon | EIF5A | 17 | + | BNIP3P1 | | + |
| exon-exon | KDELR1 | 19 | + | KDELR1 | 19 | - |
| exon-exon | RPLP0 | 12 | - | NME1-NME2 | 17 | + |
| exon-exon | SRSF1 | 17 | - | LMO4 | 1 | + |
| intron-exon | LINC00910 | | + | RPS7P1 | 17 | + |
| exon-exon | S100A11 | 1 | - | KCTD15 | 19 | + |
| exon-exon | CKAP4 | 12 | + | COL1A1 | 17 | - |
| exon-exon | RNA45SN2 | 21 | + | CKAP4 | 12 | - |
| exon-exon | NOL11 | 17 | + | RRP9 | 3 | - |
| exon-exon | C2orf68 | | - | EEF2 | 19 | - |
| exon-exon | C1orf198 | 1 | - | LZTS3 | 20 | - |
| intron-exon | RNR2 | MT | - | RPS27 | 1 | + |
| exon-exon | RNA45SN1 | 21 | + | PPP2R3B | | - |
| exon-intron | ZNF214 | 11 | - | ZNF215 | 11 | - |
| exon-intron | SELENON | 1 | - | FTSJ1 | X | + |
| exon-exon | PPP1R15A | 19 | + | ATP1A1 | 1 | + |
| exon-exon | MRPL14 | 6 | + | CNPY2 | 12 | - |
| exon-exon | TUBB | 6 | + | MTCH1 | 6 | - |
| exon-exon | MOSPD2 | X | + | SND1 | 7 | + |
| intron-exon | TPTE2P5 | 13 | - | SLC25A15 | | + |
| exon-exon | HTATSF1 | X | + | PTMA | 2 | + |
| exon-exon | SEPTIN10 | | - | NEGR1 | 1 | - |
| exon-intron | RRP36 | 6 | + | CUL7 | 6 | + |
| exon-exon | USP10 | 16 | + | NUP93 | 16 | + |
| exon-exon | PJA2 | 5 | + | PJA2 | 5 | - |
| exon-exon | PCED1A | 20 | - | CPXM1 | 20 | - |
| exon-exon | PKM | 15 | - | PPM1A | 14 | + |
| exon-exon | NSFP1 | 17 | + | VAT1L | 16 | + |
| intron-exon | LOC102724780 | | - | RNF25 | | - |
| exon-exon | COPS7B | 2 | + | RAB13 | 1 | - |
| intron-exon | MICOS10 | 1 | + | NPDC1 | 9 | - |
| exon-exon | SETD1B | | - | LINC01089 | 12 | - |
| exon-exon | POLR2D | | - | WDR33 | 2 | - |
| exon-exon | MAT2A | 2 | - | MAT2A | 2 | + |
| intron-exon | PRB2 | 12 | + | LINC01252 | | + |
| exon-exon | BORA | 13 | + | VCP | 9 | - |
| exon-exon | FANCG | | - | VCP | 9 | - |
| exon-exon | TTC26 | 7 | + | ZFP36L1 | 14 | - |
| exon-exon | HNRNPA3 | 2 | + | ZFP36L1 | 14 | - |
| exon-exon | CD46 | 1 | - | CD46 | 1 | + |
| exon-intron | SH3BP2 | 4 | + | NPIPB9 | 16 | + |
| exon-exon | EIF4A1P4 | | - | SENP3-EIF4A1 | 17 | + |
| exon-exon | PRKAR2A | 3 | + | PRKAR2A | 3 | - |
| exon-intron | IRF3 | 19 | - | GNAS | 20 | + |
| exon-exon | YBEY | 21 | + | RPL7P23 | | + |
| exon-exon | SECISBP2L | | + | SECISBP2L | 15 | - |
| exon-exon | INPP5E | 9 | + | INPP5E | 9 | - |
| exon-exon | PRNP | 20 | + | PKM | 15 | - |
| exon-exon | FLNA | X | - | UHMK1 | 1 | + |
| exon-exon | RNA45SN3 | 21 | + | LOC729218 | 4 | + |
| intron-exon | RNR1 | MT | + | COPE | 19 | - |
| intron-exon | RNR1 | MT | + | PI4KAP2 | 22 | - |
| intron-exon | RNR1 | MT | + | ND6 | MT | + |
| intron-exon | RNR1 | MT | + | TMSB10 | 2 | + |
| intron-exon | RNR1 | MT | + | RAD51D | 17 | - |
| exon-exon | TMEM30A | 6 | - | INS-IGF2 | 11 | - |
| intron-exon | RNA18SP5 | 21 | + | KMT2C | 7 | - |
| exon-exon | MAD2L2 | 1 | - | RNA45SN1 | 21 | + |
| exon-exon | RNA45SN1 | 21 | + | PPP1R13L | 19 | - |
| exon-exon | RNA45SN1 | 21 | + | TMEM126B | | + |
| intron-exon | RNA18SP5 | 21 | + | CDC20 | | + |
| exon-exon | RNA45SN1 | 21 | + | RBMX | X | - |
| exon-exon | RNA45SN2 | 21 | + | RPL8 | 8 | - |
| exon-exon | MINDY2 | 15 | + | MIDEAS | 14 | - |
| intron-exon | RAPGEFL1 | 17 | + | NCL | 2 | - |
| exon-exon | NCL | 2 | - | DCTN1 | 2 | - |
| exon-exon | CXorf38 | X | - | NUDT4 | 12 | + |
| intron-exon | MRPL33 | 2 | + | MFGE8 | 15 | - |
| exon-exon | EIF5A | 17 | + | SGSM3 | 22 | + |
| exon-exon | SNHG1 | 11 | + | TRMT10B | 9 | + |
| exon-exon | RNA45SN3 | 21 | + | PABPC1 | 8 | - |
| intron-exon | RNR1 | MT | + | PABPC1 | 8 | - |
| exon-exon | DCAF8 | 1 | - | NORAD | 20 | - |
| intron-exon | SMPD4 | 2 | + | MZT2B | 2 | + |
| exon-exon | NCAPG2 | 7 | - | LYAR | 4 | - |
| exon-intron | SRP14 | 15 | - | EME2 | 16 | + |
| exon-exon | CCDC47 | 17 | - | HSPA8 | 11 | - |
| intron-exon | ZNF532 | 18 | + | RPL3 | 22 | - |
| exon-exon | RPL3P4 | 14 | + | RPL3 | 22 | - |
| exon-exon | ARHGEF11 | 1 | - | LPP | 3 | + |
| exon-exon | MSH2 | 2 | - | MSH2 | 2 | + |
| exon-exon | EIF5A | 17 | + | DNAJC24 | 11 | + |
| intron-exon | AC007656.2 | | + | ZMYND11 | 10 | + |
| exon-exon | H19 | 11 | - | LYPLA2 | 1 | + |
| exon-exon | FYTTD1 | 3 | - | COL1A1 | 17 | - |
| exon-exon | COL1A1 | 17 | - | EMILIN1 | 2 | + |
| intron-exon | ENAH | 1 | - | COL1A1 | 17 | - |
| exon-intron | DENR | 12 | + | TAF15 | 17 | + |
| intron-exon | DHX37 | | - | NCOR2 | 12 | - |
| exon-intron | RPS2 | 16 | - | SEC61A1 | 3 | + |
| exon-intron | DANCR | 4 | + | RNF31 | 14 | + |
| exon-exon | RNA45SN1 | 21 | + | SYNRG | | - |
| exon-exon | KDM2B | 12 | + | KDM2B | 12 | - |
| exon-exon | MFSD4B | 6 | + | REV3L | 6 | + |
| exon-exon | P4HB | 17 | - | MAP4K4 | 2 | + |
| exon-intron | KRAS | 12 | + | RPL26P6 | | - |
| exon-intron | MIEF2 | | + | SLC4A8 | | - |
| intron-exon | TMEM189-UBE2V1 | 20 | + | SPPL2B | 19 | + |
| exon-exon | TSR1 | 17 | - | ROMO1 | 20 | + |
| exon-exon | SMARCA4 | 19 | + | PTMA | 2 | + |
| exon-intron | EEF1A1 | 6 | - | GOLGA3 | 12 | + |
| exon-exon | EEF1A1P5 | 9 | + | STK25 | | - |
| intron-exon | PDE3A | 12 | + | PLOD3 | 7 | - |
| exon-exon | PDIA6 | 2 | - | CYTB | MT | + |
| exon-exon | ABR | 17 | + | ABR | 17 | - |
| exon-exon | NUCKS1 | 1 | + | NUCKS1 | 1 | - |
| exon-exon | PTOV1 | 19 | + | NUCKS1 | 1 | - |
| exon-exon | RPL14 | 3 | + | EDC4 | 16 | + |
| exon-exon | ZRSR2 | X | + | AP1S2 | X | + |
| exon-exon | NBPF1 | 1 | - | DDX46 | 5 | + |
| exon-intron | TTC3 | 21 | - | LOC107985664 | X | - |
| exon-exon | RNA45SN2 | 21 | + | HMGA1 | 6 | + |
| exon-exon | RNA45SN2 | 21 | + | KIAA1522 | 1 | + |
| exon-exon | H3C7 | 6 | - | HNRNPM | 19 | + |
| exon-exon | YTHDC1 | 4 | - | RBM25 | 14 | + |
| exon-exon | MOB1B | 4 | + | RABL3 | | - |
| exon-exon | LOC145694 | 15 | - | DSE | 6 | + |
| exon-exon | CAPN6 | X | - | COL6A2 | 21 | + |
| exon-exon | CNOT1 | 16 | - | SMARCAD1 | 4 | + |
| exon-exon | IPO5 | 13 | - | IPO5 | 13 | + |
| exon-exon | PSMC1P1 | 3 | + | RPL11 | 1 | + |
| exon-exon | RNASEK-C17orf49 | 17 | + | ACTB | 7 | - |
| exon-intron | BAG6 | 6 | - | GAREM1 | 18 | - |
| exon-exon | YWHAH | 22 | + | YWHAH | 22 | - |
| exon-exon | ITPRID2 | 2 | - | ITPRID2 | 2 | + |
| exon-exon | IPO5 | 13 | - | RPL10 | X | + |
| exon-exon | RPLP0 | 12 | - | KHSRP | 19 | - |
| exon-exon | HSP90AB1 | 6 | - | SLMO2-ATP5E | 20 | - |
| exon-intron | UTP23 | 8 | + | HNRNPUL1 | 19 | + |
| intron-exon | BRD2 | 6 | - | HNRNPUL1 | 19 | + |
| exon-exon | TBL3 | 16 | - | SLC1A5 | 19 | - |
| intron-exon | NDUFAF7 | 2 | + | PRKD3 | 2 | - |
| intron-exon | CCDC200 | 17 | - | ARL4D | 17 | + |
| exon-exon | RPL13AP5 | 10 | + | RPS8P8 | 5 | + |
| exon-intron | TTBK2 | 15 | - | RPL13AP25 | 13 | - |
| intron-exon | ADAMTSL2 | | + | RPL13A | 19 | + |
| exon-exon | RPL13AP5 | 10 | + | SRP19 | 5 | + |
| exon-intron | GFM2 | 5 | - | SPAG6 | 10 | + |
| exon-exon | TMEM141 | | + | SEPHS1 | 10 | - |
| exon-exon | DIABLO | 12 | + | LRRC47 | 1 | - |
| exon-intron | LOC100506023 | 1 | - | TNFSF4 | 1 | - |
| exon-exon | RNA45SN2 | 21 | + | ST13P6 | | + |
| intron-exon | COPG2 | 7 | + | SRGAP1 | 12 | + |
| exon-exon | HUWE1 | X | + | KRT8 | 12 | - |
| exon-exon | SETX | 9 | + | SETX | 9 | - |
| exon-exon | IGDCC4 | 15 | + | ARHGEF40 | 14 | + |
| exon-exon | ZNF814 | 19 | - | ZNF587 | 19 | - |
| exon-exon | JPT2 | 16 | - | JPT2 | 16 | + |
| exon-exon | YWHAG | 7 | - | RPL24 | 3 | - |
| exon-exon | RNA45SN3 | 21 | + | ARSB | 5 | - |
| exon-exon | SERPINB6 | 6 | - | BASP1 | 5 | + |
| exon-exon | FUS | 16 | + | ADNP2 | 18 | + |
| exon-exon | MEN1 | 11 | - | RNF44 | 5 | - |
| intron-exon | RNA28SP | 21 | - | COPB1 | 11 | - |
| exon-exon | NSUN2 | 5 | + | SLC25A39 | 17 | - |
| exon-intron | RALY | 20 | + | PIGZ | | + |
| exon-exon | SNHG32 | 6 | + | AURKAIP1 | | - |
| exon-exon | H2AC14 | 6 | - | BEX3 | X | + |
| intron-exon | CYTB | MT | - | EIF2AK1 | 7 | - |
| exon-exon | ENTPD7 | 10 | + | CYTB | MT | + |
| exon-exon | PLEKHJ1 | 19 | - | RPL3P2 | 6 | + |
| exon-exon | CDKN2A | 9 | + | CDKN2A | 9 | - |
| exon-exon | CECR2 | 22 | + | METAP2 | 12 | + |
| exon-exon | NDUFAB1 | 16 | - | ROMO1 | 20 | + |
| intron-exon | ADAMTSL2 | | + | TM4SF1 | 3 | - |
| exon-exon | USP30 | 12 | + | ZFAND5 | 9 | - |
| exon-exon | COL3A1 | 2 | - | COL3A1 | 2 | + |
| exon-exon | COL3A1 | 2 | - | CCNI | 4 | - |
| exon-exon | COL3A1 | 2 | - | COL3A1 | 2 | + |
| exon-exon | COL3A1 | 2 | - | COL3A1 | 2 | + |
| exon-exon | GNL3 | 3 | + | COL3A1 | 2 | + |
| exon-exon | COL3A1 | 2 | + | CLU | 8 | - |
| exon-exon | COL9A3 | | - | COL9A3 | 20 | + |
| exon-exon | NXPE3 | 3 | - | NXPE3 | 3 | + |
| intron-exon | LOC105373024 | 22 | - | CS | 12 | - |
| exon-intron | MRPS6 | 21 | + | AP000317.1 | | + |
| exon-exon | RPS24 | 10 | + | BNIP3 | | - |
| exon-exon | RNPEPL1 | 2 | + | CTSV | 9 | - |
| exon-exon | AARS1 | 16 | - | EIF2S2 | 20 | - |
| intron-exon | CD99P1 | Y | - | TWNK | 10 | + |
| exon-exon | SNRNP40 | 1 | - | PRDX1 | 1 | - |
| intron-exon | GPSM3 | | - | SLC27A6 | 5 | + |
| exon-intron | ANKRD17 | 4 | - | PTBP1 | 19 | + |
| exon-exon | LIG3 | 17 | + | ESYT2 | 7 | - |
| exon-exon | CPNE1 | 20 | - | KBTBD2 | 7 | - |
| intron-exon | INS-IGF2 | 11 | + | HYOU1 | 11 | + |
| exon-exon | RNU6-17P | 15 | - | TJP1 | 15 | - |
| exon-exon | OGT | X | + | SAMD4B | 19 | + |
| exon-intron | ARPP19 | | - | AC011509.2 | | + |
| intron-exon | LOC399975 | 11 | - | ARHGAP32 | 11 | - |
| intron-exon | HOXB-AS1 | 17 | + | PTK2 | 8 | - |
| exon-exon | MALAT1 | 11 | + | ZNF429 | 19 | + |
| exon-exon | RNA45SN2 | 21 | - | TPT1 | 13 | - |
| exon-intron | SNHG1 | 11 | - | SVOPL | | - |
| exon-exon | BTBD3 | 20 | + | SASH1 | 6 | + |
| intron-exon | STRAP | 12 | + | TUT1 | 11 | - |
| exon-exon | KIF2C | 1 | - | CHTF8 | 16 | - |
| exon-exon | RPS3P3 | 3 | + | LY6E | 8 | + |
| exon-intron | FBXO5 | | + | AL080276.2 | 6 | + |
| exon-exon | EEF1A1P6 | 7 | - | EEF1A1P5 | 9 | + |
| exon-exon | ZNF587B | 19 | + | ZNF587 | 19 | + |
| exon-exon | COL1A2 | 7 | - | COL1A2 | 7 | + |
| exon-exon | H19 | 11 | - | LAMA5 | 20 | - |
| exon-exon | SMC3 | 10 | + | FN1 | 2 | - |
| intron-exon | LOC107303339 | 3 | + | VHL | 3 | + |
| intron-exon | SUMF2 | 7 | + | SCD | 10 | + |
| exon-exon | RNA45SN1 | 21 | + | DHRS1 | 14 | - |
| intron-exon | AGK | | + | SLC44A1 | 9 | + |
| intron-exon | RNA18SP5 | 21 | + | TPP1 | 11 | - |
| exon-exon | RPL35 | 9 | + | C1orf43 | 1 | - |
| exon-exon | INS-IGF2 | 11 | - | ATP11A | 13 | + |
| exon-exon | PTPN12 | 7 | + | HSP90AA1 | 14 | - |
| exon-exon | MAP4 | 3 | - | KANK4 | 1 | - |
| exon-exon | AP3D1 | 19 | - | RPL19 | 17 | + |
| exon-exon | AP3D1 | 19 | + | WWTR1 | 3 | - |
| intron-exon | CCDC200 | 17 | - | ZNF667 | 19 | - |
| intron-exon | CCDC200 | 17 | - | MCM4 | 8 | + |
| intron-exon | ANKDD1A | 15 | + | HDGF | 1 | - |
| exon-exon | TRIM33 | 1 | - | COLEC12 | 18 | - |
| intron-exon | IRF6 | 1 | - | C1orf74 | 1 | - |
| exon-exon | H19 | 11 | - | USB1 | 16 | + |
| exon-exon | SMIM14 | 4 | - | MARCHF5 | 10 | + |
| exon-intron | SNX29P1 | | + | LOC105371131 | 16 | - |
| exon-exon | AMD1 | 6 | + | ECHDC1 | 6 | - |
| exon-intron | ADAM9 | 8 | + | ISCA1 | 9 | - |
| intron-exon | PHF12 | 17 | - | RBMS1 | 2 | - |
| exon-exon | PDZRN3 | 3 | + | PDZRN3 | 3 | - |
| exon-exon | RNA45SN3 | 21 | + | OTUB1 | 11 | + |
| intron-exon | MYH9 | 22 | - | CD81 | 11 | + |
| exon-exon | DRAXIN | 1 | - | MAD2L2 | 1 | - |
| exon-exon | ALOX12-AS1 | 17 | - | MYO10 | 5 | - |
| exon-exon | CEP95 | 17 | + | XRCC5 | 2 | + |
| exon-exon | DENND10P1 | | - | DENND10P1 | | + |
| intron-exon | REPS1 | 6 | - | RBM33 | 7 | + |
| exon-exon | LDHA | 11 | + | SET | 9 | - |
| exon-exon | HAPLN1 | 5 | - | GNAS | 20 | + |
| exon-exon | RNA45SN3 | 21 | + | GNAS | 20 | + |
| intron-exon | CCDC200 | 17 | - | GNAS | 20 | + |
| exon-exon | RNA45SN1 | 21 | + | NACC1 | 19 | + |
| exon-exon | CMTM3 | 16 | + | NCSTN | 1 | + |
| exon-intron | RASAL2 | 1 | + | FAM153CP | 5 | + |
| intron-exon | STT3A | 11 | + | LRRC47 | 1 | - |
| exon-exon | AXL | 19 | + | INS-IGF2 | 11 | - |
| exon-exon | TMA7 | 3 | + | INS-IGF2 | 11 | - |
| exon-exon | INS-IGF2 | 11 | - | SSBP3 | 1 | - |
| exon-exon | CRKL | 22 | + | EIF1 | 17 | + |
| exon-exon | COL2A1 | 12 | + | COL2A1 | 12 | - |
| exon-exon | ENO1 | 1 | + | ENO1 | 1 | - |
| exon-exon | RNA45SN1 | 21 | + | ILVBL | 19 | - |
| exon-exon | UPF1 | 19 | - | UPF1 | 19 | + |
| exon-intron | SSR2 | 1 | - | PACSIN3 | | - |
| intron-exon | GLCCI1 | 7 | + | PARP4 | 13 | - |
| exon-exon | RNA45SN1 | 21 | + | ANXA2 | 15 | - |
| intron-exon | RNR1 | MT | + | HNRNPA0 | 5 | - |
| exon-exon | DYRK1B | 19 | + | SENP3-EIF4A1 | 17 | + |
| exon-exon | ZNF3 | 7 | - | FZD2 | 17 | + |
| exon-exon | RPL35 | 9 | + | HSP90AB1 | 6 | + |
| exon-exon | RNA45SN2 | 21 | + | PCYOX1 | 2 | + |
| exon-exon | F2R | 5 | + | CCDC134 | 22 | + |
| exon-exon | SLC25A3 | 12 | + | LAMB1 | 7 | - |
| exon-exon | TES | 7 | - | UNG | 12 | + |
| exon-exon | RNA45SN3 | 21 | + | SNRPD2 | 19 | - |
| exon-intron | POLR2A | 17 | + | LOC100505555 | | - |
| exon-exon | BST2 | 19 | - | POU2F1 | 1 | + |
| exon-exon | ERGIC1 | 5 | - | ERGIC1 | 5 | + |
| exon-exon | TCF7 | 5 | + | MTPAP | 10 | - |
| exon-exon | CDK19 | 6 | + | CDK19 | 6 | - |
| exon-exon | PPP1R10 | 6 | - | PCED1A | 20 | - |
| exon-intron | BCL7A | 12 | - | KXD1 | 19 | + |
| exon-exon | NRIP1 | 21 | - | BTBD1 | 15 | - |
| exon-exon | PRKCI | 3 | + | CCDC88B | 11 | + |
| exon-exon | MALAT1 | 11 | + | MNT | 17 | - |
| intron-exon | SND1 | 7 | + | PRKD1 | 14 | - |
| exon-exon | NDUFA7 | 19 | - | PRKCSH | 19 | + |
| exon-intron | FTO | 16 | + | MCHR2 | 6 | - |
| exon-intron | FLT1 | 13 | - | DENND3 | 8 | + |
| exon-exon | PSMC5 | 17 | + | DCTN1 | 2 | - |
| intron-exon | AC004160.1 | 7 | + | LOC105375153 | 7 | + |
| exon-intron | OTULIN | | + | IWS1 | 2 | - |
| exon-exon | LSM10 | 1 | - | STK40 | 1 | - |
| exon-exon | TCF3 | 19 | - | VTI1A | 10 | + |
| exon-exon | ABHD17B | 9 | + | ABHD17B | 9 | - |
| exon-exon | NCDN | 1 | + | PROX2 | 14 | + |
| intron-exon | IRF2 | 4 | - | DBT | 1 | - |
| intron-exon | AL392023.2 | 14 | - | LOC105370456 | 14 | - |
| exon-exon | KLHL38 | | + | CANX | 5 | + |
| intron-exon | CCDC144NL | 17 | + | LOC339260 | | + |
| intron-exon | SOX2-OT | 3 | + | TMEM144 | 4 | + |
| exon-exon | RNA45SN1 | 21 | + | RUVBL2 | 19 | + |
| exon-exon | RNA45SN3 | 21 | + | TRAF4 | 17 | + |
| exon-exon | NR1D1 | 17 | - | USP5 | 12 | + |
| exon-exon | ZNF638 | 2 | + | RAX | 18 | - |
| exon-exon | CLTC | 17 | - | CLTC | 17 | + |
| exon-exon | LIN28B | 6 | + | RPS8 | 1 | + |
| intron-exon | PIBF1 | 13 | - | ITGB1BP1 | 2 | - |
| exon-exon | MXI1 | 10 | + | PEPD | 19 | - |
| exon-exon | STOM | 9 | + | STOM | 9 | - |
| exon-exon | PRRC1 | 5 | - | PRRC1 | 5 | + |
| exon-exon | ANP32E | 1 | - | ATP6 | MT | + |
| exon-exon | RNA45SN1 | 21 | + | TAZ | X | + |
| exon-exon | KLF5 | 13 | + | TMC4 | 19 | - |
| exon-exon | ATPAF1 | 1 | - | PLIN3 | 19 | - |
| intron-exon | LOC101928688 | | + | SSBP3 | 1 | - |
| intron-exon | SEMA3E | | - | HNRNPH3 | 10 | + |
| intron-exon | LANCL2 | | + | PSPHP1 | | + |
| exon-intron | CSGALNACT2 | 10 | + | PKD1P6 | 16 | - |
| intron-exon | GLYCTK-AS1 | | - | GLYCTK | | - |
| exon-intron | LOC105379220 | | + | ENPP7P1 | | + |
| exon-exon | KDM5A | 12 | - | TPT1P4 | | - |
| exon-exon | FN1 | 2 | - | LYN | 8 | + |
| exon-exon | RNA45SN3 | 21 | + | BTF3 | 5 | + |
| exon-exon | RCC1 | 1 | + | STK3 | 8 | - |
| exon-intron | RSL1D1 | 16 | - | EIF4H | 7 | + |
| exon-exon | BMS1P10 | 9 | - | NKAP | X | - |
| exon-exon | LOC100130950 | 17 | + | ARPP19 | 15 | - |
| exon-exon | VRK2 | 2 | + | FANCL | 2 | - |
| exon-exon | EDRF1 | 10 | + | MVB12A | 19 | + |
| exon-exon | SAR1B | 5 | - | KLF12 | 13 | - |
| exon-intron | PDXK | 21 | + | AGPAT3 | 21 | + |
| exon-exon | CD151 | | + | EXOG | | + |
| exon-intron | ZDHHC8P1 | 22 | - | TANGO6 | 16 | + |
| exon-exon | RNA45SN3 | 21 | + | RBM8A | 1 | - |
| exon-exon | RCN2 | 15 | - | RCN2 | 15 | + |
| intron-exon | ADGRL4 | | + | PSAT1 | 9 | + |
| exon-exon | TUBB | 6 | + | JPT1 | 17 | - |
| intron-exon | LINC00428 | | - | PTMA | 2 | + |
| exon-exon | TPM1 | 15 | + | EEF1A1P17 | | + |
| exon-exon | IDH1 | 2 | - | NCL | 2 | - |
| exon-exon | RNA45SN2 | 21 | + | RPL8 | 8 | - |
| exon-exon | H19 | 11 | - | PTMA | 2 | + |
| intron-exon | LOC100420869 | | - | RPL4 | 15 | - |
| exon-exon | MIDEAS | 14 | + | MIDEAS | 14 | - |
| exon-intron | RBM6 | 3 | + | BCR | 22 | + |
| exon-exon | EEF1G | 11 | - | TUBBP1 | | + |
| exon-exon | TUBA1B | 12 | - | ISCU | 12 | + |
| exon-exon | TUBA1B | 12 | - | ZSCAN29 | 15 | - |
| exon-exon | FTH1 | 11 | - | SEPTIN11 | 4 | + |
| intron-exon | CDYL | 6 | + | EXOC2 | 6 | - |
| intron-exon | LOC101927978 | 16 | + | TXLNG | X | + |
| exon-exon | SELENOS | 15 | + | SELENOS | 15 | - |
| exon-intron | PSENEN | 19 | + | CTDP1 | 18 | - |
| exon-exon | MAEA | 4 | - | MAEA | 4 | + |
| exon-exon | MIS18A | 21 | - | HSP90AB1 | 6 | + |
| exon-exon | RNU6-1 | 15 | - | FLRT3 | | - |
| exon-exon | CDC42BPG | 11 | - | NATD1 | 17 | - |
| exon-exon | SLC7A5 | 16 | + | SLC7A5 | 16 | - |
| exon-exon | HOXB3 | 17 | - | PSMD4 | 1 | + |
| exon-exon | THAP12 | 11 | - | ZNF638 | 2 | + |
| intron-exon | C12orf60 | 12 | - | ESRG | | - |
| exon-exon | IGF2BP1 | 17 | - | IGF2BP1 | 17 | + |
| exon-exon | NECTIN3-AS1 | 3 | - | LOC151760 | | - |
| exon-intron | LOC100288798 | 12 | + | AC008014.1 | | + |
| exon-exon | PSMB6 | 17 | + | ANKRD27 | 19 | - |
| exon-intron | LOC107985661 | X | + | PLP1 | X | + |
| exon-exon | FAM120A | 9 | + | SENP3-EIF4A1 | 17 | + |
| exon-exon | RIMKLB | 12 | - | DNAJC27-AS1 | 2 | + |
| intron-exon | CACNA2D3 | | + | H3-3B | 17 | - |
| exon-exon | SFRP2 | 4 | + | SFRP2 | 4 | - |
| exon-exon | HMGA2 | 12 | + | CCT2 | 12 | + |
| exon-intron | ATF7IP | 12 | + | ZIM2 | 19 | - |
| exon-exon | PRR12 | 19 | - | NAA10 | X | - |
| exon-exon | IL18BP | | + | HNRNPA1P25 | | - |
| exon-exon | IFITM2 | 11 | + | HNRNPM | 19 | + |
| intron-exon | NRDC | 1 | + | MUC17 | 7 | - |
| exon-exon | KCMF1 | 2 | - | KCMF1 | 2 | + |
| exon-exon | YWHAZ | 8 | + | YWHAZ | 8 | - |
| exon-exon | MLLT1 | 19 | + | MLLT1 | 19 | - |
| exon-exon | GMNN | 6 | - | GMNN | 6 | + |
| exon-exon | CES2 | 16 | - | CES2 | 16 | + |
| exon-exon | NOP58 | 2 | - | NOP58 | 2 | + |
| intron-exon | IL6ST | 5 | - | LOC107984974 | | - |
| exon-exon | FAM20A | 17 | - | PRKAR1A | 17 | + |
| exon-exon | VANGL1 | 1 | - | VANGL1 | 1 | + |
| exon-exon | RABL3 | | + | HSP90AA1 | 14 | - |
| intron-exon | PAXBP1-AS1 | 21 | + | PAXBP1 | 21 | - |
| exon-exon | BTG1 | 12 | + | BTG1 | 12 | - |
| exon-exon | PSMA7 | 20 | + | ND2 | MT | + |
| intron-exon | RBM27 | 5 | - | RBM27 | 5 | + |
| exon-exon | RAB11FIP2 | 10 | + | HMGXB4 | 22 | - |
| exon-exon | HSP90AB1 | 6 | - | HSP90AB1 | 6 | + |
| exon-exon | CIRBP | 19 | - | CIRBP | 19 | + |
| exon-exon | AHI1 | 6 | + | AHI1 | 6 | - |
| intron-exon | LOC107985664 | X | + | TTC3 | 21 | + |
| exon-exon | ALCAM | 3 | - | ALCAM | 3 | + |
| exon-exon | HADHA | 2 | + | HADHAP1 | | - |
| exon-exon | JOSD1 | 22 | - | TOMM22 | 22 | - |
| exon-exon | HSPB1P1 | 9 | + | HSPB1P2 | | - |
| exon-exon | SLC16A9 | | + | SLC16A9 | 10 | - |
| intron-exon | HIGD1AP1 | 12 | - | HIGD1A | 3 | - |
| exon-exon | LOC105370413 | | - | LOC105370413 | 14 | + |
| exon-exon | FDFT1 | 8 | - | ND2 | MT | + |
| exon-exon | LRRC58 | 3 | + | LRRC58 | 3 | - |
| exon-exon | TCOF1 | 5 | - | ARMCX4 | X | - |
| intron-exon | LOC107984532 | 12 | - | ETFBKMT | 12 | - |
| intron-exon | BTRC | 10 | - | SFXN3 | 10 | - |
| exon-exon | RPL6P27 | 18 | + | RPL6P10 | 4 | + |
| exon-intron | SKA2 | 17 | + | SIAH1 | 16 | - |
| exon-exon | SH3BGRL3 | 1 | - | DYNC1H1 | 14 | - |
| exon-intron | RTN3 | 11 | - | HELLS | 10 | + |
| exon-exon | ATP5MC3 | 2 | + | SPATA13 | 13 | - |
| exon-intron | PLA2G15 | 16 | - | CD82 | 11 | - |
| exon-exon | RNA45SN2 | 21 | + | WFS1 | 4 | + |
| exon-exon | RNA45SN2 | 21 | + | ACTB | 7 | - |
| exon-intron | RNA45SN2 | 21 | + | GRINA | 8 | + |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN1 | 21 | + |
| exon-exon | RNA45SN3 | 21 | + | SRCAP | 16 | + |
| exon-intron | RNA45SN1 | 21 | + | PPFIA1 | 11 | + |
| exon-exon | RNA45SN2 | 21 | + | VASN | 16 | + |
| exon-intron | RNA45SN1 | 21 | + | AL133367.1 | | - |
| exon-exon | RNA45SN3 | 21 | + | PCOLCE | 7 | + |
| exon-exon | COL3A1 | 2 | - | COL3A1 | 2 | + |
| exon-exon | RNA45SN3 | 21 | + | IER2 | 19 | + |
| exon-exon | SLC25A32 | 8 | - | LOC105369147 | 8 | - |
| exon-exon | NBEAL2 | 3 | - | NBEAL2 | 3 | + |
| exon-exon | RNA45SN3 | 21 | + | SLC44A2 | 19 | + |
| exon-exon | RNA45SN3 | 21 | + | COL1A2 | 7 | + |
| intron-exon | TOR1AIP1 | | - | TOR1AIP2 | 1 | - |
| exon-exon | KLHDC4 | 16 | - | CCN2 | 6 | - |
| exon-exon | RNA45SN3 | 21 | + | ANXA11 | 10 | - |
| intron-exon | RNA18SP5 | 21 | + | ERRFI1 | 1 | - |
| intron-exon | RNA28SP | 21 | + | RNA45SN3 | 21 | + |
| exon-exon | RNA45SN1 | 21 | + | TUFM | 16 | - |
| exon-exon | RNA45SN3 | 21 | + | FN1 | 2 | - |
| exon-exon | RNA45SN2 | 21 | + | CCN2 | 6 | - |
| exon-intron | RNA45SN3 | 21 | + | HYDIN2 | 1 | + |
| exon-intron | WASH9P | 1 | - | LOC102724250 | 1 | - |
| exon-exon | DDX50 | 10 | - | CDK13 | 7 | - |
| exon-exon | ATP6 | MT | - | COX2 | MT | - |
| exon-exon | LAMA4 | 6 | - | IGFBP4 | 17 | + |
| exon-exon | SPHK2 | 19 | - | SPHK2 | 19 | + |
| exon-exon | NORAD | 20 | - | GMIP | 19 | - |
| exon-exon | FBXW4 | 10 | - | TMEM8B | 9 | + |
| exon-intron | PEX6 | 6 | - | CNPY3-GNMT | 6 | - |
| exon-exon | ZNF263 | 16 | - | ZNF263 | 16 | + |
| exon-exon | ZNF425 | 7 | - | ZNF786 | 7 | - |
| exon-exon | LOC107984945 | 1 | + | SMAP2 | 1 | + |
| intron-exon | SEC22B4P | 1 | + | FLII | 17 | - |
| exon-exon | UHMK1 | 1 | + | CAP1 | 1 | + |
| exon-exon | PAPOLA | 14 | + | COL6A2 | 21 | + |
| intron-exon | CDK4 | 12 | - | ADORA1 | 1 | - |
| exon-intron | IFT22 | 7 | - | FBXO32 | 8 | - |
| exon-exon | RPSA | 3 | + | S100A4 | 1 | + |
| exon-intron | NFKBIA | 14 | + | RNR2 | MT | - |
| intron-exon | PSORS1C3 | 6 | + | SLC38A2 | 12 | + |
| exon-exon | UFC1 | 1 | + | UTP11 | 1 | + |
| exon-exon | FTL | 19 | - | IFIT3 | 10 | + |
| exon-exon | METTL14 | 4 | + | LAMTOR2 | 1 | + |
| exon-exon | APEX1 | 14 | + | OAS2 | 12 | + |
| exon-exon | ZFAND5 | 9 | + | ZFAND5 | 9 | - |
| exon-exon | GNG12 | 1 | + | PFDN5 | 12 | + |
| intron-exon | CATSPER3 | 5 | - | PCBD2 | 5 | - |
| exon-exon | SLC30A9 | 4 | + | MCM7 | 7 | - |
| exon-exon | UGT8 | 4 | + | HP | 16 | + |
| intron-exon | MAT2B | 5 | - | EPCAM | 2 | - |
| intron-exon | ARRDC3 | 5 | - | CERT1 | 5 | + |
| exon-intron | RPL30 | 8 | + | SGPP2 | 2 | + |
| exon-intron | KLK7 | 19 | - | LINC00621 | 13 | - |
| exon-intron | INTS2 | 17 | - | ACSS1 | 20 | - |
| exon-intron | MAP3K7CL | 21 | - | ABCB4 | 7 | - |
| intron-exon | NDUFA12 | 12 | - | TSPAN1 | 1 | + |
| exon-intron | ERO1A | 14 | - | LOC728755 | 14 | - |
| exon-exon | SFT2D1 | 6 | - | CDV3 | 3 | - |
| intron-exon | CLDN16 | 3 | - | RBM47 | 4 | + |
| exon-exon | KPNB1 | 17 | - | ATP1B1 | 1 | - |
| exon-exon | SRP9 | 1 | + | TNFRSF11B | 8 | + |
| intron-exon | CCSER1 | 4 | + | RNF227 | 17 | + |
| exon-exon | STMN1 | 1 | - | PPM1H | 12 | + |
| exon-intron | DDX3X | X | - | IGFBP1 | 7 | - |
| exon-intron | LAMP2 | X | + | CHIC1 | X | - |
| intron-exon | LOC105370109 | 13 | + | B2M | 15 | + |
| exon-exon | TALAM1 | 11 | - | CYP1B1 | 2 | - |
| exon-exon | NORAD | 20 | + | REG4 | 1 | + |
| intron-exon | LINC02511 | 4 | - | CEACAM6 | 19 | - |
| exon-exon | RPS27AP16 | 16 | - | SINHCAFP2 | 18 | - |
| exon-exon | APOBEC1 | 12 | + | MALAT1 | 11 | + |
| exon-exon | RNA45SN3 | 21 | + | LTBR | 12 | + |
| exon-exon | UBE2V2 | 8 | - | ANXA2P2 | 9 | - |
| exon-exon | BBOX1-AS1 | 11 | - | IFIT2 | 10 | + |
| exon-exon | RPL37AP5 | 7 | + | RPL39P3 | 6 | + |
| exon-exon | RNF181 | 2 | - | RPS6 | 9 | - |
| exon-exon | CEACAM5 | 19 | + | PTGES3 | 12 | + |
| intron-exon | HAUS4 | 14 | - | RPL30 | 8 | - |
| exon-intron | RBM47 | 4 | + | FBXL2 | 3 | + |
| exon-exon | ND4 | MT | + | CYTB | MT | - |
| exon-intron | ND5 | MT | + | ANKRD34B | 5 | - |
| exon-exon | RPL39P3 | 6 | - | CFTR | 7 | - |
| exon-exon | TMED10 | 14 | - | SMC5 | 9 | + |
| exon-exon | DYNLT3 | X | - | SLC18B1 | 6 | - |
| exon-exon | TALAM1 | 11 | - | RBM47 | 4 | - |
| intron-exon | MREG | 2 | + | PECR | 2 | + |
| exon-exon | CDC42EP3 | 2 | + | CDC42EP3 | 2 | - |
| exon-exon | MPZL2 | 11 | - | APEX1 | 14 | - |
| intron-exon | IL16 | 15 | - | GNAS | 20 | + |
| exon-exon | SIPA1L3 | 19 | - | QTRT2 | 3 | + |
| exon-exon | RINT1 | 7 | + | FBXO3 | 11 | - |
| exon-exon | SAMD9L | 7 | - | RICTOR | 5 | - |
| exon-exon | VEZT | 12 | + | NRAV | 12 | - |
| exon-exon | SOD1 | 21 | - | PIGR | 1 | - |
| exon-exon | B2M | 15 | + | CNDP2 | 18 | + |
| intron-exon | UBOX5-AS1 | 20 | + | SNRPD1 | 18 | + |
| exon-exon | PPP1R2 | 3 | - | SDCBP | 8 | + |
| exon-exon | HSPA8 | 11 | + | EIF4EP2 | 17 | - |
| exon-exon | B2M | 15 | - | CLDN18 | 3 | + |
| exon-intron | SAR1A | 10 | + | CCSER1 | 4 | + |
| intron-exon | LOC105370109 | 13 | + | NEAT1 | 11 | + |
| intron-exon | GBP3 | 1 | + | LOC105378841 | 1 | + |
| exon-intron | GNPNAT1 | 14 | - | BAIAP2L1 | 7 | - |
| exon-exon | IDO1 | 8 | - | EEF1A1 | 6 | - |
| exon-exon | TFG | 3 | - | S100A4 | 1 | + |
| exon-exon | CXCL10 | 4 | - | MALAT1 | 11 | + |
| exon-exon | GOLPH3L | 1 | - | EEF1A1 | 6 | - |
| exon-exon | RPSA | 3 | + | CEACAM6 | 19 | + |
| exon-exon | TUBA1B | 12 | - | IFIT2 | 10 | + |
| exon-exon | OAS1 | 12 | + | ANXA2 | 15 | + |
| exon-intron | PI3 | 20 | + | HYKK | 15 | + |
| exon-exon | SMAD5 | 5 | + | YES1 | 18 | - |
| exon-exon | UBE2V2 | 8 | - | ANXA2P2 | 9 | - |
| exon-exon | GCH1 | 14 | - | IFIT2 | 10 | - |
| exon-exon | B2M | 15 | - | NFIA | 1 | - |
| exon-exon | RPL4 | 15 | + | CP | 3 | + |
| exon-exon | RPL10 | X | + | PLSCR1 | 3 | - |
| exon-exon | CD46 | 1 | - | S100A4 | 1 | + |
| exon-exon | RNF181 | 2 | - | RPS6 | 9 | - |
| exon-exon | TOB1 | 17 | + | HSP90AA1 | 14 | - |
| exon-exon | APMAP | 20 | - | KPNB1 | 17 | + |
| exon-exon | MINDY1 | 1 | - | CXCL10 | 4 | - |
| exon-exon | SDAD1 | 4 | - | HSPA8 | 11 | - |
| exon-exon | SLC25A5P3 | 7 | - | SBNO1 | 12 | + |
| exon-exon | EIF2S3 | X | - | KIF3B | 20 | + |
| exon-exon | THSD4 | 15 | - | ACSL4 | X | - |
| intron-exon | EXOC6 | 10 | + | TM4SF4 | 3 | + |
| exon-intron | CFB | 6 | - | EEFSEC | 3 | - |
| exon-intron | OLFM1 | 9 | - | SRGAP3 | 3 | - |
| exon-intron | TAF8 | 6 | + | CAP1 | 1 | + |
| intron-exon | LOC110120717 | 9 | - | AMIGO2 | 12 | - |
| exon-exon | ATP6AP2 | X | + | GAGE12F | X | + |
| intron-exon | CCDC91 | 12 | - | H3P16 | 4 | - |
| exon-exon | ANKRD10 | 13 | + | SINHCAF | 12 | - |
| exon-exon | PPP2R1A | 19 | + | PSMB5 | 14 | - |
| exon-exon | ND4 | MT | + | CYTB | MT | - |
| intron-exon | LIMCH1 | 4 | + | LAPTM4A | 2 | + |
| intron-exon | LINC00621 | 13 | - | UBE2V2 | 8 | - |
| exon-exon | HOOK1 | 1 | + | CP | 3 | - |
| intron-exon | LINC01818 | 2 | + | CYP2C18 | 10 | + |
| exon-intron | REG4 | 1 | - | MOSPD1 | X | + |
| exon-exon | EEF1D | 8 | + | EEF1D | 8 | - |
| exon-intron | UBE2H | 7 | - | ZNF850 | 19 | - |
| intron-exon | PSMD10 | X | + | PECR | 2 | + |
| exon-exon | SLC34A2 | 4 | - | GEMIN8P4 | 1 | - |
| exon-exon | KPNB1 | 17 | - | ATP1B1 | 1 | - |
| exon-exon | UPF2 | 10 | - | ZDHHC2 | 8 | + |
| exon-exon | NACA | 12 | + | HMGB1P1 | 20 | + |
| exon-exon | C20orf85 | 20 | - | TGFBR1 | 9 | - |
| exon-exon | RPS17 | 15 | - | SPEN | 1 | - |
| exon-exon | DHX15 | 4 | - | HAS2 | 8 | - |
| exon-intron | PLEKHS1 | 10 | + | AC093831.1 | 4 | - |
| exon-intron | LZTS3 | 20 | + | MYO1D | 17 | - |
| exon-exon | CDC42EP3 | 2 | + | CDC42EP3 | 2 | - |
| exon-exon | DDX1 | 2 | + | FLNB | 3 | + |
| exon-exon | EEF1D | 8 | - | PEX19 | 1 | - |
| intron-exon | LINC00621 | 13 | - | THOC3 | 5 | - |
| intron-exon | RNR2 | MT | - | COPA | 1 | - |
| exon-exon | ERO1A | 14 | + | STC1 | 8 | - |
| exon-exon | SHISA5 | 3 | + | RXFP1 | 4 | + |
| exon-intron | TMA7 | 3 | + | XACT | X | - |
| exon-exon | CUL5 | 11 | + | NT5C2 | 10 | - |
| intron-exon | FAM153CP | 5 | - | SENP2 | 3 | - |
| exon-exon | IMPDH2 | 3 | - | RXFP1 | 4 | + |
| exon-exon | RBM23 | 14 | + | EZH2 | 7 | + |
| exon-exon | RPL36 | 19 | - | POLR2C | 16 | + |
| intron-exon | SNX18 | 5 | + | HNRNPA2B1 | 7 | - |
| exon-intron | EEF1E1-BLOC1S5 | 6 | - | AF121898.1 | 8 | - |
| exon-exon | NDRG1 | 8 | - | ANXA4 | 2 | - |
| exon-intron | LOC105373239 | X | + | DOCK4 | 7 | + |
| exon-exon | H3-3B | 17 | + | REG4 | 1 | + |
| exon-exon | B2M | 15 | + | DYNLT1 | 6 | + |
| exon-exon | TM4SF1 | 3 | + | CEACAM6 | 19 | - |
| exon-exon | EEF1G | 11 | - | CTSE | 1 | + |
| intron-exon | FARS2 | 6 | - | LOC93622 | 4 | - |
| exon-exon | TNS3 | 7 | - | EPYC | 12 | - |
| exon-exon | FBXL7 | 5 | + | ATP6V1G2-DDX39B | 6 | - |
| intron-exon | AL583722.1 | 14 | + | INF2 | 14 | + |
| exon-exon | LOC100996842 | 17 | + | MPDU1 | 17 | + |
| exon-exon | LIFR | 5 | + | LIFR | 5 | - |
| exon-intron | PABPC1L | 20 | + | TOMM34 | 20 | + |
| exon-intron | NUS1 | 6 | - | NUS1P1 | X | - |
| exon-exon | RESF1 | 12 | + | SERINC1 | 6 | - |
| exon-exon | CLU | 8 | + | CLU | 8 | - |
| exon-exon | ADM | 11 | + | SLTM | 15 | - |
| intron-exon | ZPBP | 7 | - | MARVELD1 | 10 | - |
| exon-intron | KIAA1522 | 1 | - | RYR3 | 15 | - |
| exon-exon | KARS1 | 16 | - | CXCL10 | 4 | - |
| exon-exon | WARS1 | 14 | - | WARS1 | 14 | + |
| exon-exon | GLCCI1 | 7 | + | OLFM4 | 13 | + |
| exon-intron | NSUN6 | 10 | - | LINC02672 | 10 | + |
| exon-exon | CLIC5 | 6 | + | CLIC5 | 6 | - |
| exon-exon | TRIB1 | 8 | + | TCHP | 12 | + |
| exon-exon | FLVCR1 | 1 | + | RESF1 | 12 | + |
| exon-exon | PXDC1 | 6 | - | ODR4 | 1 | - |
| exon-exon | RNA45SN1 | 21 | + | TGFBI | 5 | + |
| exon-exon | KMT2C | 7 | - | COL4A2 | 13 | + |
| exon-exon | RNA45SN1 | 21 | + | RHBDF1 | 16 | - |
| exon-exon | GPAM | 10 | + | GPAM | 10 | - |
| exon-intron | ARFRP1 | 20 | - | OSBP2 | 22 | - |
| exon-exon | HMGA1P3 | 12 | - | HMGA1 | 6 | - |
| intron-exon | DLGAP4 | 20 | + | LINC00938 | 12 | - |
| exon-intron | NCR3LG1 | 11 | + | LOC107984316 | 11 | + |
| exon-exon | BROX | 1 | + | SERPINE1 | 7 | + |
| exon-exon | RNU6-1 | 15 | - | BANP | 16 | + |
| exon-exon | LTBP2 | 14 | - | ISCA2 | 14 | - |
| exon-exon | TPM1 | 15 | + | TPM1 | 15 | - |
| intron-exon | TSC22D1 | 13 | - | IGF2BP2 | 3 | - |
| exon-exon | LUM | 12 | + | LUM | 12 | - |
| exon-exon | NUDT3 | 6 | - | NUDT3 | 6 | + |
| exon-exon | ATP5MDP1 | X | + | IFIT2 | 10 | - |
| exon-exon | CEACAM6 | 19 | + | SEC31A | 4 | + |
| exon-exon | COPZ1 | 12 | + | EHF | 11 | - |
| exon-exon | ITGB8 | 7 | + | ITGB8 | 7 | - |
| exon-exon | CANX | 5 | + | TGM2 | 20 | - |
| exon-intron | SSPN | 12 | + | RP11-513G19.1 | 12 | + |
| exon-exon | FAHD2A | 2 | - | RPS11 | 19 | + |
| exon-exon | MAP3K13 | 3 | + | PRRC2C | 1 | - |
| exon-intron | SARNP | 12 | + | SARNP | 12 | - |
| intron-exon | HMCN1 | 1 | + | EGR1 | 5 | + |
| intron-exon | ARID5B | 10 | + | PXYLP1 | 3 | + |
| intron-exon | KLF5 | 13 | + | DNAJB12 | 10 | - |
| intron-exon | TMEM41B | 11 | + | UBN2 | 7 | + |
| exon-exon | VPS13C | 15 | + | VPS13C | 15 | - |
| exon-exon | CLU | 8 | - | CEACAM6 | 19 | + |
| exon-exon | CFB | 6 | + | AASDHPPT | 11 | + |
| exon-exon | SEC22B4P | 1 | + | SEC22B | 1 | - |
| exon-exon | BCAS3 | 17 | + | ADAM10 | 15 | - |
| exon-exon | KAT6B | 10 | - | KAT6B | 10 | + |
| exon-intron | ZNF395 | 8 | + | MIR570HG | 3 | + |
| intron-exon | BRAF | 7 | - | CALM1 | 14 | + |
| exon-intron | ERBIN | 5 | + | AC025442.2 | 5 | + |
| exon-intron | ARHGAP19-SLIT1 | 10 | - | TRNY | MT | + |
| exon-exon | BTG1 | 12 | - | FKBP9 | 7 | - |
| exon-exon | FAM200B | 4 | - | H3P6 | 2 | + |
| intron-exon | BCL11B | 14 | + | AMY2A | 1 | + |
| exon-intron | HNMT | 2 | + | HPS3 | 3 | - |
| exon-intron | ADIPOR1 | 1 | - | BICC1 | 10 | - |
| exon-intron | EXOSC7 | 3 | + | LOC107986324 | 4 | - |
| exon-exon | TMED10 | 14 | - | SMC5 | 9 | + |
| exon-exon | ASS1 | 9 | + | PABPC1 | 8 | + |
| exon-exon | PPIL3 | 2 | - | DYNLL1 | 12 | + |
| exon-exon | LARP4 | 12 | - | RPL6 | 12 | - |
| exon-exon | RHEX | 1 | + | FNBP4 | 11 | - |
| exon-intron | KNTC1 | 12 | - | KNTC1 | 12 | + |
| exon-exon | DNAJC25-GNG10 | 9 | + | GAPDH | 12 | - |
| exon-intron | ACBD6 | 1 | - | LHX4 | 1 | - |
| exon-intron | ATG13 | 11 | + | MAGT1 | X | + |
| exon-intron | PTP4A1 | 6 | + | AC093307.1 | 5 | - |
| exon-intron | ASS1 | 9 | + | CSMD1 | 8 | - |
| exon-intron | TBL1XR1 | 3 | + | RNR2 | MT | - |
| exon-intron | ZNF649 | 19 | - | PLOD2 | 3 | - |
| exon-exon | EEF1D | 8 | - | PEX19 | 1 | - |
| exon-exon | PPA2 | 4 | - | PDGFC | 4 | - |
| intron-exon | LOC107985179 | 18 | + | BAZ2B | 2 | - |
| exon-intron | ADGRG2 | X | - | PTPRG | 3 | + |
| exon-exon | SHROOM3 | 4 | + | CCNI | 4 | - |
| intron-exon | YTHDC2 | 5 | - | PLA2G15 | 16 | + |
| exon-intron | PDCL | 9 | - | C3orf70 | 3 | - |
| exon-exon | GLUL | 1 | + | CALN1 | 7 | + |
| exon-exon | CAMTA1 | 1 | + | RBM23 | 14 | - |
| exon-intron | LOC105371887 | 17 | + | RPL30 | 8 | - |
| exon-exon | CAV1 | 7 | + | CAV1 | 7 | - |
| intron-exon | PLEKHA6 | 1 | + | MDM4 | 1 | + |
| intron-exon | FAM27E4 | 9 | - | TOMM20 | 1 | - |
| exon-exon | THG1L | 5 | + | DCN | 12 | - |
| exon-exon | SDCBP | 8 | + | SDCBP | 8 | - |
| exon-intron | PIGR | 1 | - | RASSF5 | 1 | - |
| exon-exon | TALAM1 | 11 | - | MALAT1 | 11 | + |
| exon-intron | ITGB1 | 10 | - | LOC105376486 | 10 | - |
| exon-exon | SMG1 | 16 | + | SMG1 | 16 | - |
| exon-intron | BHLHE40 | 3 | + | MAGT1 | X | + |
| exon-exon | PDCD4 | 10 | + | B3GALNT1 | 3 | - |
| exon-exon | APLP2 | 11 | + | TUT7 | 9 | - |
| exon-exon | PUM1 | 1 | - | CEACAM6 | 19 | + |
| exon-intron | CDH17 | 8 | - | IL15 | 4 | - |
| exon-exon | CTSE | 1 | - | POLR2H | 3 | - |
| intron-exon | ANOS1 | X | + | IVNS1ABP | 1 | - |
| exon-exon | RPL30 | 8 | - | AP1M2 | 19 | - |
| exon-exon | WWC3 | X | - | SKIL | 3 | + |
| exon-exon | PTER | 10 | - | ANXA10 | 4 | + |
| exon-intron | SORBS2 | 4 | - | LOC101927978 | 16 | + |
| exon-exon | IL6R | 1 | + | IL6ST | 5 | - |
| exon-intron | CLLU1 | 12 | + | LINC02397 | 12 | + |
| intron-exon | AL512328.1 | 1 | - | AGT | 1 | - |
| intron-exon | AL512328.1 | 1 | - | AGT | 1 | - |
| exon-exon | CAPN9 | 1 | - | AGT | 1 | - |
| exon-exon | CAPN9 | 1 | - | AGT | 1 | - |
| intron-exon | LINC01427 | 20 | - | LOC105372561 | 20 | - |
| exon-exon | XIRP2 | 2 | + | ZBTB16 | 11 | + |
| intron-exon | LEPR | 1 | + | CYTB | MT | + |
| exon-exon | CEP112 | 17 | - | LRBA | 4 | - |
| exon-exon | HSD3B2 | 1 | + | HSD3BP2 | 1 | + |
| intron-exon | DNAH17 | 17 | + | DNAH17-AS1 | 17 | + |
| exon-intron | AARS1 | 16 | - | HYDIN2 | 1 | + |
| intron-exon | TRB | 7 | + | TRBC1 | 7 | + |
| intron-exon | NCOA1 | 2 | + | SKIDA1 | 10 | - |
| exon-intron | H3-3A | 1 | - | AL512343.2 | 1 | - |
| intron-exon | RIC1 | 9 | - | PLGRKT | 9 | - |
| exon-exon | RBM8A | 1 | - | DYNLRB1 | 20 | + |
| intron-exon | RNU6-45P | 11 | + | PLA2R1 | 2 | - |
| exon-intron | TPM4 | 19 | + | WHAMM | 15 | + |
| exon-exon | EXOC7 | 17 | - | MTDH | 8 | + |
| exon-exon | INTS6-AS1 | 13 | + | CEP44 | 4 | + |
| exon-exon | NIP7 | 16 | + | SLU7 | 5 | - |
| exon-intron | LOC339666 | 22 | + | AL021937.4 | 22 | + |
| exon-exon | MIR497HG | 17 | - | ALOX12-AS1 | 17 | - |
| intron-exon | WDR76 | 15 | + | ERG28 | 14 | - |
| exon-exon | QRICH2 | 17 | - | ADAM28 | 8 | + |
| exon-exon | TTBK2 | 15 | - | LIN7C | 11 | - |
| exon-exon | LOC100506258 | 11 | - | SYT9 | 11 | - |
| intron-exon | LINC01900 | 18 | - | LOC107984499 | 12 | - |
| exon-intron | KLC1 | 14 | + | LOC100996723 | 1 | + |
| exon-exon | RANBP2 | 2 | + | INPP5B | 1 | - |
| intron-exon | CADPS | 3 | + | LINC00698 | 3 | + |
| exon-exon | RPL22 | 1 | - | DLC1 | 8 | - |
| intron-exon | UFM1 | 13 | - | LINC00571 | 13 | - |
| intron-exon | PPFIA1 | 11 | + | ND6 | MT | + |
| exon-exon | COASY | 17 | + | PPAN-P2RY11 | 19 | + |
| exon-exon | PRPF38A | 1 | + | ZSCAN5A | 19 | - |
| exon-exon | AXL | 19 | + | LTBP1 | 2 | + |
| intron-exon | SLC25A33 | 1 | + | ERO1B | 1 | + |
| intron-exon | RAB9B | X | - | PLP1 | X | + |
| exon-exon | C1orf35 | 1 | - | TGFBR3L | 19 | + |
| intron-exon | CACYBP | 1 | - | LOC105371622 | 1 | - |
| exon-exon | LOC105374163 | 3 | - | MBNL1 | 3 | - |
| exon-exon | TEX36-AS1 | 10 | + | LOC102724793 | 10 | + |
| exon-exon | COX1 | MT | + | DENND3 | 8 | - |
| exon-exon | LOC107985792 | 2 | - | LOC101929251 | 2 | - |
| exon-intron | LNPK | 2 | - | AC016751.1 | 2 | - |
| intron-exon | NPHP3-ACAD11 | 3 | - | GNS | 12 | - |
| exon-intron | COX3 | MT | + | ACAP2 | 3 | - |
| exon-exon | LINC00964 | 8 | - | LOC105375742 | 8 | - |
| exon-exon | LINC02851 | 9 | + | CDKL2 | 4 | - |
| intron-exon | SCN11A | 3 | - | KCNA1 | 12 | + |
| exon-intron | ASTN2 | 9 | - | PAPPA | 9 | - |
| exon-intron | LINC01405 | 12 | + | LOC105369980 | 12 | + |
| intron-exon | LINC01297-DUXAP10-NBEAP6 | 14 | - | COL17A1 | 10 | - |
| exon-intron | SEPTIN6 | X | - | AIDA | 1 | - |
| exon-intron | ZNF732 | 4 | - | ZNF876P | 4 | - |
| intron-exon | AL354707.1 | 9 | + | KDM4C | 9 | + |
| exon-exon | FNBP1 | 9 | - | GPT2 | 16 | + |
| intron-exon | MGST2 | 4 | - | LOC101927490 | 4 | - |
| exon-exon | LOC107984116 | 5 | - | LOC105379014 | 5 | - |
| exon-intron | ATP6 | MT | - | BLCAP | 20 | - |
| exon-intron | SGCB | 4 | - | LRRC66 | 4 | - |
| intron-exon | LOC101929710 | 5 | + | HSPA14 | 10 | + |
| intron-exon | RP11-278H7.4 | 1 | - | LOC112268257 | 1 | - |
| intron-exon | H2BC17 | 6 | + | OR2B6 | 6 | + |
| exon-exon | LINC00908 | 18 | + | LINC00683 | 18 | + |
| intron-exon | LINC00299 | 2 | - | LINC00298 | 2 | - |
| exon-intron | ND1 | MT | + | SGMS1 | 10 | - |
| exon-intron | ELK3 | 12 | + | BRINP1 | 9 | - |
| intron-exon | UNC5C | 4 | - | LIN7C | 11 | - |
| intron-exon | AC004471.2 | 22 | - | TSSK1A | 22 | - |
| exon-exon | SURF6 | 9 | + | RPL38 | 17 | + |
| exon-exon | ZNF587 | 19 | + | ZNF814 | 19 | + |
| exon-exon | RNA45SN2 | 21 | + | KRTAP3-1 | 17 | - |
| intron-exon | IGH | 14 | - | IGHM | 14 | - |
| intron-exon | AC025470.2 | 5 | + | LOC102724122 | 5 | + |
| intron-exon | UNKL | 16 | - | PANX2 | 22 | + |
| intron-exon | AC003986.1 | 7 | + | FERD3L | 7 | + |
| exon-exon | SMKR1 | 7 | + | LOC642943 | 9 | + |
| exon-exon | MDM2 | 12 | + | CWC25 | 17 | - |
| intron-exon | RYR3 | 15 | + | SLC12A6 | 15 | + |
| exon-intron | RBFOX3 | 17 | - | RYR2 | 1 | - |
| intron-exon | AC010273.2 | 5 | - | SLC30A5 | 5 | - |
| exon-intron | LYZ | 12 | + | WDFY3 | 4 | - |
| exon-exon | RNU6-17P | 15 | - | TJP1 | 15 | - |
| exon-intron | DUT | 15 | - | AC023355.1 | 15 | - |
| exon-intron | MDM4 | 1 | + | LOC105371692 | | + |
| exon-exon | PRB2 | 12 | - | C1S | 12 | + |
| exon-intron | MAP4 | 3 | - | EVA1C | 21 | + |
| exon-intron | TAGLN | 11 | + | EIF3L | 22 | + |
| exon-exon | ZNF148 | 3 | - | SLC12A8 | | - |
| exon-intron | MYOCOS | | + | TCF4 | 18 | - |
| intron-exon | LOC112268240 | | + | HRNR | | + |
| exon-intron | CLK3 | 15 | + | EDC3 | 15 | + |
| exon-exon | ANLN | 7 | - | ANLN | 7 | + |
| exon-exon | SIPA1L1 | 14 | - | SIPA1L1 | 14 | + |
| exon-exon | SUMF2 | 7 | + | RILPL1 | 12 | - |
| exon-exon | LOC105379039 | | - | FAM169A | 5 | - |
| exon-exon | TRAJ21 | 14 | + | TRAC | 14 | + |
| exon-intron | EGR1 | 5 | + | DAXX | 6 | - |
| exon-exon | ND4 | MT | + | PRPF40B | 12 | + |
| exon-exon | TICAM1 | 19 | + | TICAM1 | 19 | - |
| exon-intron | RPS8 | 1 | - | IGH | 14 | - |
| exon-exon | LOC112268284 | 21 | - | RNA45SN3 | 21 | + |
| exon-exon | USP19 | 3 | - | POMT1 | 9 | + |
| exon-exon | COX1 | MT | + | ZYX | 7 | + |
| exon-exon | PUF60 | 8 | + | PUF60 | 8 | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN3 | 21 | + |
| exon-intron | DDX31 | 9 | - | CFAP77 | 9 | - |
| exon-exon | PNPLA7 | 9 | + | PGAP6 | 16 | - |
| exon-exon | ZNF767P | 7 | - | FAAH2 | X | + |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | JUN | 1 | - | MPV17 | 2 | - |
| exon-exon | TMEM175 | 4 | + | DGKQ | 4 | + |
| exon-intron | RNF168 | 3 | - | UBXN7 | 3 | - |
| exon-exon | RPL13 | 16 | - | RPL13 | 16 | + |
| exon-exon | ABCA1 | 9 | - | HNRNPK | 9 | - |
| exon-exon | CEP295 | 11 | + | ARRB2 | 17 | + |
| exon-exon | NUP42 | 7 | + | TMC8 | 17 | + |
| exon-exon | PKD1P1 | 16 | + | PKD1P2 | 16 | + |
| exon-exon | CDCA4 | 14 | + | CDCA4 | 14 | - |
| intron-exon | FP236383.3 | 21 | + | NCL | 2 | + |
| exon-exon | INPP5A | 10 | + | INPP5A | 10 | - |
| exon-exon | WAS | X | + | MRPL40 | 22 | + |
| exon-intron | SNRPD3 | 22 | + | GGT1 | 22 | + |
| exon-exon | TAF15 | 17 | + | HNRNPA2B1 | 7 | - |
| exon-intron | WDR73 | 15 | - | METTL17 | 14 | + |
| exon-intron | TRBC2 | 7 | + | TRB | 7 | + |
| exon-intron | STAG3L2 | 7 | - | GTF2IRD2 | 7 | - |
| exon-exon | RABGEF1 | 7 | + | UBC | 12 | - |
| exon-intron | CD28 | 2 | + | KANSL2 | 12 | - |
| exon-exon | ND4 | MT | + | WDR24 | 16 | - |
| exon-exon | ST3GAL1 | 8 | - | ANP32B | 9 | + |
| exon-exon | IRF3 | 19 | - | SF3A2 | 19 | + |
| intron-exon | KSR2 | 12 | - | KIAA0319L | 1 | - |
| intron-exon | RNA28SP | 21 | + | TUBB4B | 9 | + |
| exon-exon | CCSER2 | 10 | + | RNA45SN1 | 21 | + |
| exon-exon | MYH9 | 22 | + | MYH9 | 22 | - |
| exon-exon | AMD1 | 6 | + | TNFAIP3 | 6 | + |
| exon-intron | TOX4 | 14 | + | METTL3 | 14 | + |
| exon-exon | ARHGEF18 | 19 | + | HSCB | 22 | + |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | PIK3CD | 1 | + | PIK3CD | 1 | - |
| exon-exon | ADAM8 | 10 | - | ADAM8 | 10 | + |
| exon-exon | POLR3K | 16 | - | IL9RP3 | 16 | - |
| exon-exon | LINC00528 | 22 | - | LINC00528 | 22 | + |
| exon-exon | TRAJ53 | 14 | + | TRAC | 14 | + |
| exon-intron | DAZAP2 | 12 | + | SMAGP | 12 | + |
| exon-exon | SNX9 | 6 | - | SNX9 | 6 | + |
| intron-exon | DYNLT1 | 6 | + | SYTL3 | 6 | + |
| exon-exon | PARP6 | 15 | - | PARP6 | 15 | + |
| exon-exon | RAP1A | 1 | + | EIF4A3 | 17 | - |
| intron-exon | SH3PXD2A | 10 | - | NEURL1 | 10 | - |
| intron-exon | ZNF862 | 7 | - | ZNF862 | 7 | + |
| exon-exon | JTB | 1 | + | JTB | 1 | - |
| exon-exon | BICDL1 | 12 | + | BICDL1 | 12 | - |
| exon-exon | APTR | 7 | + | RSBN1L | 7 | + |
| exon-exon | XIST | X | - | SNHG14 | 15 | + |
| intron-exon | MFSD2A | 1 | + | GOLGA8B | 15 | - |
| intron-exon | HELLS | 10 | - | RPL10P16 | 19 | - |
| exon-exon | HSP90AA1 | 14 | + | PNPT1 | 2 | - |
| exon-exon | SLTM | 15 | - | RPL10 | X | - |
| exon-exon | ITGA6 | 2 | + | COX7B | X | + |
| intron-exon | MCM7 | 7 | + | MAP7D3 | X | + |
| exon-exon | HNRNPA2B1 | 7 | + | CPSF2 | 14 | - |
| exon-exon | IQGAP2 | 5 | - | SHH | 7 | + |
| exon-exon | SMAP1 | 6 | + | AFF4 | 5 | + |
| exon-exon | TPT1 | 13 | - | EEF1A1 | 6 | + |
| exon-exon | SNRNP200 | 2 | + | SPINT2 | 19 | + |
| exon-exon | TUFM | 16 | - | USP4 | 3 | - |
| exon-exon | HSP90AA1 | 14 | + | HSP90AA1 | 14 | - |
| exon-intron | MRPL10 | 17 | + | PDSS2 | 6 | + |
| exon-exon | COX1 | MT | + | DDX52 | 17 | - |
| exon-exon | SEPTIN2 | 2 | - | HSP90AA1 | 14 | - |
| intron-exon | GPHN | 14 | - | ACTG1 | 17 | + |
| exon-intron | RANGAP1 | 22 | + | MID1IP1-AS1 | X | - |
| exon-exon | KRT6C | 12 | + | TSN | 2 | + |
| exon-exon | UBA1 | X | + | CYTB | MT | - |
| exon-exon | CAP1 | 1 | + | CHEK1 | 11 | + |
| exon-intron | LINC01978 | 17 | + | LINC01979 | 17 | + |
| exon-exon | RPS28P7 | 11 | + | PFKL | 21 | + |
| exon-exon | TOE1 | 1 | - | TOE1 | 1 | + |
| exon-exon | RBM25 | 14 | + | SRRT | 7 | + |
| exon-exon | PAFAH1B2 | 11 | + | ARID5A | 2 | + |
| exon-exon | CYTH1 | 17 | - | ZC3H7A | 16 | - |
| exon-exon | PIK3R5 | 17 | - | RNF135 | 17 | + |
| exon-intron | CYP2D7 | 22 | - | AC254562.2 | 22 | - |
| intron-exon | ARHGAP27P1 | 17 | - | BPTFP1 | 17 | - |
| exon-exon | CXCR4 | 2 | - | TSC22D3 | X | - |
| exon-exon | ZFPM1 | 16 | + | KLF6 | 10 | - |
| intron-exon | TMEM99 | 17 | + | KRT10 | 17 | - |
| exon-exon | BECN1 | 17 | - | BECN1 | 17 | + |
| exon-intron | SYNGR1 | 22 | + | SYNGR1 | 22 | - |
| exon-exon | KRT1 | 12 | - | ND4 | MT | + |
| exon-exon | LY6G6C | 6 | + | LY6G6C | 6 | - |
| exon-exon | EZR | 6 | + | EZR | 6 | - |
| exon-exon | PTMA | 2 | - | PTMA | 2 | + |
| exon-exon | RPN2 | 20 | - | RPN2 | 20 | + |
| exon-intron | PIGQ | 16 | + | LOC102723945 | 16 | - |
| exon-intron | ANXA2 | 15 | - | VKORC1L1 | 7 | - |
| exon-exon | ABLIM1 | 10 | + | ABLIM1 | 10 | - |
| exon-exon | TRIM29 | 11 | + | TRIM29 | 11 | - |
| exon-exon | BECN1 | 17 | - | BECN1 | 17 | + |
| exon-intron | LCE1F | 1 | - | LCE1F | 1 | + |
| intron-exon | TMEM99 | 17 | + | KRT10 | 17 | - |
| intron-exon | PDXDC1 | 16 | + | PKD1P6-NPIPP1 | 16 | - |
| exon-intron | LOC107987222 | 15 | + | WHAMMP1 | 15 | + |
| exon-exon | PKP1 | 1 | + | PKP1 | 1 | - |
| exon-exon | PPL | 16 | + | PPL | 16 | - |
| exon-exon | LCE2C | 1 | - | LCE2C | 1 | + |
| exon-intron | COX3 | MT | + | MTATP6P1 | 1 | + |
| exon-exon | RNA45SN1 | 21 | - | JUP | 17 | + |
| intron-exon | DNAJB6P1 | 11 | + | DNAJB6 | 7 | - |
| exon-exon | EZR | 6 | + | EZR | 6 | - |
| exon-exon | KLK7 | 19 | + | KLK7 | 19 | - |
| exon-exon | VKORC1 | 16 | + | VKORC1 | 16 | - |
| intron-exon | PSORS1C1 | 6 | + | PSORS1C2 | 6 | - |
| exon-exon | HNRNPUL2-BSCL2 | 11 | + | HNRNPUL2-BSCL2 | 11 | - |
| exon-intron | RNA45SN1 | 21 | - | AAMDC | 11 | + |
| exon-exon | CYB5R3 | 22 | + | CYB5R3 | 22 | - |
| exon-exon | LAT | 16 | - | LAT | 16 | + |
| exon-exon | PTMA | 2 | - | PTMA | 2 | + |
| exon-exon | KRT5 | 12 | + | KRT5 | 12 | - |
| exon-exon | LORICRIN | 1 | - | KRT1 | 12 | + |
| exon-intron | PTMAP8 | 3 | - | DTWD2 | 5 | - |
| exon-exon | CASZ1 | 1 | + | CASZ1 | 1 | - |
| exon-exon | DSP | 6 | + | DSP | 6 | - |
| intron-exon | TMEM99 | 17 | + | KRT10 | 17 | - |
| exon-exon | SLC35E4 | 22 | + | DUSP18 | 22 | - |
| intron-exon | DNAJC14 | 12 | - | SARNP | 12 | - |
| exon-intron | ZNF44 | 19 | - | TIMP2 | 17 | - |
| exon-exon | RNA45SN1 | 21 | - | PRDX1 | 1 | - |
| exon-exon | RNA45SN3 | 21 | + | SCAP | 3 | - |
| exon-exon | HNRNPD | 4 | + | ND5 | MT | - |
| exon-intron | COX3 | MT | - | SORL1 | 11 | - |
| exon-intron | UBE2V2 | 8 | - | RNA28SP | 21 | + |
| exon-intron | ATP6 | MT | - | RNA18SP5 | 21 | - |
| exon-exon | RNA45SN1 | 21 | - | RPL37 | 5 | - |
| exon-exon | ND2 | MT | - | SERINC5 | 5 | - |
| intron-exon | HIVEP3 | 1 | + | ERAP2 | 5 | + |
| exon-exon | ND1 | MT | - | CLK3 | 15 | - |
| exon-exon | HUWE1 | X | + | ND4 | MT | - |
| intron-exon | NBAS | 2 | + | VPS13B | 8 | + |
| exon-intron | LINC00456 | 13 | - | LINC00456 | 13 | + |
| exon-intron | CTBP1-AS | 4 | + | RNA28SP | 21 | + |
| exon-exon | ATP6V1C2 | 2 | + | PRDX3 | 10 | + |
| exon-exon | DPEP1 | 16 | + | ND2 | MT | - |
| exon-exon | COX1 | MT | - | SPRR2A | 1 | + |
| exon-intron | GLUD2 | X | - | PAX8 | 2 | + |
| exon-exon | CYTB | MT | - | ND5 | MT | - |
| exon-exon | SRRM1 | 1 | - | ND5 | MT | - |
| exon-exon | ATP6 | MT | - | COX2 | MT | - |
| exon-exon | ND2 | MT | - | ND4 | MT | - |
| exon-exon | ND1 | MT | - | ABHD4 | 14 | + |
| exon-intron | FAM174B | 15 | - | LOC101926994 | 15 | - |
| intron-exon | SKP1 | 5 | + | GAPDH | 12 | + |
| exon-exon | H6PD | 1 | - | ND4 | MT | - |
| intron-exon | ABAT | 16 | - | TEX37 | 2 | + |
| exon-exon | CYTB | MT | - | COX1 | MT | - |
| exon-exon | ATP6 | MT | - | LINC00442 | 13 | - |
| exon-intron | ND5 | MT | - | PTMA | 2 | + |
| exon-intron | FKBP3 | 14 | + | FKBP3 | 14 | - |
| exon-exon | RPL3P4 | 14 | + | RNA45SN2 | 21 | + |
| exon-exon | ND1 | MT | - | ND4 | MT | - |
| exon-exon | ND3 | MT | - | RNA45SN1 | 21 | + |
| exon-intron | ATP6 | MT | - | PRIM2 | 6 | - |
| exon-exon | ND4 | MT | - | COX1 | MT | - |
| exon-exon | ARID1A | 1 | - | ARID1A | 1 | + |
| exon-exon | COX2 | MT | - | TIMP2 | 17 | + |
| intron-exon | DAB1 | 1 | - | C1QTNF6 | 22 | + |
| exon-exon | CYTB | MT | - | PSAP | 10 | - |
| intron-exon | KRT13 | 17 | + | KRT13 | 17 | - |
| exon-intron | COX3 | MT | - | LINC02476 | 7 | + |
| exon-exon | CYTB | MT | - | TIPARP | 3 | + |
| exon-exon | COX1 | MT | - | NACA3P | 4 | + |
| exon-exon | ND6 | MT | - | HLA-DRA | 6 | - |
| exon-exon | RNA45SN1 | 21 | - | LINC01000 | 7 | + |
| exon-exon | ND4 | MT | - | CD24 | 6 | - |
| exon-intron | RNA45SN2 | 21 | + | RNA28SP | 21 | + |
| exon-exon | COX3 | MT | - | CD82 | 11 | + |
| exon-exon | COX3 | MT | - | ADNP | 20 | - |
| exon-exon | RNA45SN2 | 21 | - | ZNRF3 | 22 | + |
| exon-exon | ND6 | MT | - | ND5 | MT | - |
| exon-intron | POLE3 | 9 | + | SLC39A11 | 17 | - |
| exon-exon | DCAF7 | 17 | - | COX1 | MT | - |
| intron-exon | WAKMAR2 | 6 | + | ND3 | MT | - |
| exon-exon | ATP6 | MT | - | AMT | 3 | - |
| exon-intron | ND2 | MT | - | RPA2 | 1 | - |
| intron-exon | OSGEP | 14 | + | ATP6 | MT | - |
| exon-exon | ND5 | MT | - | KIF1C | 17 | - |
| exon-exon | KRT13 | 17 | + | KRT13 | 17 | - |
| exon-exon | ATP6 | MT | - | MYH9 | 22 | + |
| exon-exon | RNA45SN2 | 21 | - | IGHG1 | 14 | + |
| intron-exon | ZNF106 | 15 | - | COX1 | MT | - |
| intron-exon | FOXK1 | 7 | - | RNA45SN3 | 21 | + |
| intron-exon | VAV1 | 19 | + | NEK6 | 9 | - |
| exon-exon | RNA45SN3 | 21 | - | BGN | X | - |
| exon-exon | CLNS1A | 11 | + | RNA45SN1 | 21 | + |
| exon-exon | LOC101928236 | 3 | - | KRT18P34 | 3 | - |
| exon-exon | LDHB | 12 | + | COX2 | MT | - |
| exon-exon | RNA45SN2 | 21 | - | OGDH | 7 | - |
| exon-exon | WASL | 7 | + | COX1 | MT | - |
| exon-intron | RNA45SN1 | 21 | - | GEM | 8 | + |
| exon-exon | ND4 | MT | - | NACA | 12 | - |
| exon-exon | LENG8 | 19 | - | LOC105376731 | 15 | + |
| exon-exon | PPP4C | 16 | + | PPP4C | 16 | - |
| exon-intron | ATP6 | MT | - | TALDO1 | 11 | + |
| exon-exon | ND5 | MT | - | NDUFA1 | X | + |
| exon-intron | KRT5 | 12 | + | RBBP8NL | 20 | + |
| exon-intron | COX1 | MT | - | DDX60 | 4 | + |
| exon-exon | SFXN5 | 2 | - | GTPBP1 | 22 | - |
| exon-exon | ATP6 | MT | - | MAPK10 | 4 | + |
| intron-exon | RNA18SP5 | 21 | - | HSPA12A | 10 | - |
| intron-exon | RNR1 | MT | - | PTMA | 2 | + |
| intron-exon | RNR1 | MT | - | PABPC1 | 8 | - |
| intron-exon | C16orf72 | 16 | - | HSPA8 | 11 | + |
| exon-exon | ND4 | MT | - | COX3 | MT | - |
| exon-exon | KRT18 | 12 | - | TPT1 | 13 | + |
| exon-exon | TCF20 | 22 | - | KRT8 | 12 | - |
| exon-exon | CCT7 | 2 | - | CCT7 | 2 | + |
| exon-exon | KMT2D | 12 | + | RNA45SN1 | 21 | - |
| exon-intron | UBE2H | 7 | - | PALLD | 4 | - |
| exon-exon | COX3 | MT | - | ZG16B | 16 | + |
| exon-exon | COX1 | MT | - | GPX3 | 5 | + |
| exon-exon | GAPDH | 12 | + | GAPDH | 12 | - |
| exon-exon | CYTB | MT | - | RHOQ | 2 | + |
| exon-intron | ND1 | MT | - | AC025627.4 | 17 | - |
| intron-exon | RNA28SP | 21 | + | PFN1 | 17 | - |
| exon-exon | LOC107987003 | 9 | - | RPSA | 3 | - |
| exon-exon | APOBR | 16 | - | EEF1A1 | 6 | - |
| exon-exon | GFAP | 17 | + | GFAP | 17 | - |
| intron-exon | MTND2P28 | 1 | - | ND2 | MT | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN1 | 21 | + |
| exon-exon | RPL27 | 17 | - | RASIP1 | 19 | + |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN1 | 21 | + |
| exon-intron | SLC35A4 | 5 | - | RNA28SP | 21 | + |
| exon-exon | RNA45SN1 | 21 | - | COX3 | MT | - |
| exon-exon | RNA45SN3 | 21 | - | RPL23AP42 | 3 | - |
| exon-exon | ND4 | MT | - | RPLP0 | 12 | - |
| exon-exon | COX1 | MT | - | BPTF | 17 | + |
| exon-exon | COX1 | MT | - | BPTF | 17 | + |
| exon-intron | ND4 | MT | - | FAM120A | 9 | + |
| exon-exon | RNA45SN2 | 21 | - | SIPA1L1 | 14 | + |
| intron-exon | ND5 | MT | - | RPL13AP5 | 10 | + |
| exon-intron | COX1 | MT | - | DNM2 | 19 | + |
| exon-exon | COX1 | MT | - | MRPL58 | 17 | - |
| exon-exon | ND1 | MT | - | SLC12A2 | 5 | + |
| exon-intron | USP9X | X | + | LOC100630923 | 7 | + |
| exon-exon | ATP1A2 | 1 | - | ATP1A2 | 1 | + |
| intron-exon | VIM | 10 | + | IQCG | 3 | - |
| exon-exon | GPX7 | 1 | + | CCN2 | 6 | - |
| exon-exon | ATP6 | MT | - | COX1 | MT | - |
| exon-exon | HLA-G | 6 | + | ND2 | MT | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN3 | 21 | + |
| exon-intron | STAU2 | 8 | + | RNA28SP | 21 | + |
| exon-exon | CYTB | MT | - | C1S | 12 | - |
| exon-exon | RNA45SN2 | 21 | + | PRRC2B | 9 | + |
| exon-exon | RNA45SN3 | 21 | - | RPL6 | 12 | - |
| exon-exon | ND1 | MT | - | ZNF451 | 6 | + |
| exon-intron | COX1 | MT | - | MTCO1P12 | 1 | - |
| exon-exon | COX3 | MT | - | ND4 | MT | - |
| exon-intron | ND1 | MT | - | ABL2 | 1 | + |
| exon-intron | ND5 | MT | - | PPARG | 3 | + |
| intron-exon | MTCO1P12 | 1 | - | COX1 | MT | - |
| exon-intron | RNA45SN2 | 21 | - | TMEM165 | 4 | - |
| exon-exon | COX1 | MT | - | ND1 | MT | - |
| exon-exon | ND1 | MT | - | COX1 | MT | - |
| intron-exon | CRTC3-AS1 | 15 | - | ND4 | MT | - |
| intron-exon | ND5 | MT | - | LENG8 | 19 | + |
| exon-intron | CYTB | MT | - | NAV2 | 11 | + |
| exon-intron | ND4 | MT | - | PCBD2 | 5 | + |
| exon-exon | NPNT | 4 | + | COX1 | MT | - |
| exon-intron | ZBED3 | 5 | - | AL021408.1 | 6 | - |
| exon-exon | ND4 | MT | - | PPP1CC | 12 | - |
| exon-exon | RNA45SN3 | 21 | + | ND5 | MT | - |
| intron-exon | MTND2P28 | 1 | - | FN1 | 2 | + |
| exon-exon | EEF1A1P6 | 7 | + | POLE | 12 | + |
| exon-exon | NOP14-AS1 | 4 | - | KRT6A | 12 | + |
| intron-exon | TASOR | 3 | + | PTGR2 | 14 | - |
| exon-exon | ABCA5 | 17 | + | APOL3 | 22 | - |
| exon-intron | RNA45SN1 | 21 | - | DOT1L | 19 | + |
| exon-exon | KRT6C | 12 | + | KRT5 | 12 | + |
| intron-exon | KRT8 | 12 | - | KRT5 | 12 | - |
| exon-exon | CYTB | MT | - | HSPA5 | 9 | - |
| exon-intron | CYTB | MT | - | CASC3 | 17 | + |
| exon-intron | ATP6 | MT | - | ASH1L | 1 | - |
| exon-exon | COX1 | MT | - | COX3 | MT | - |
| exon-exon | COX2 | MT | - | RPL15 | 3 | - |
| exon-exon | ZFAS1 | 20 | - | RNA45SN3 | 21 | - |
| exon-intron | ND2 | MT | - | MTCO2P12 | 1 | - |
| exon-exon | EIF3CL | 16 | + | LDHB | 12 | - |
| exon-exon | STAT2 | 12 | - | HSPA5 | 9 | + |
| exon-intron | ATP6 | MT | - | OLMALINC | 10 | - |
| exon-exon | COX2 | MT | - | ND4 | MT | - |
| intron-exon | ND5 | MT | - | NAAA | 4 | - |
| exon-exon | BAP1 | 3 | - | RNA45SN3 | 21 | + |
| exon-exon | RPSAP58 | 19 | - | RPSAP19 | 1 | + |
| exon-intron | RNA45SN3 | 21 | - | NINJ1 | 9 | - |
| exon-exon | ND6 | MT | - | ATP6 | MT | - |
| intron-exon | LOC105373611 | 2 | - | ND2 | MT | - |
| exon-intron | ND4 | MT | - | CYRIA | 2 | - |
| exon-exon | KRT16 | 17 | - | ECHS1 | 10 | - |
| exon-exon | SCYL1 | 11 | + | COL1A1 | 17 | - |
| exon-exon | COL1A1 | 17 | - | COL1A1 | 17 | + |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN1 | 21 | + |
| exon-exon | EEF1A1P6 | 7 | + | EEF1A1 | 6 | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN3 | 21 | + |
| intron-exon | ACACA | 17 | - | GPATCH8 | 17 | - |
| exon-exon | PSMA6P2 | X | + | PSMA6 | 14 | - |
| exon-intron | HLA-B | 6 | - | SHB | 9 | + |
| intron-exon | LOC112268150 | 15 | - | RPS13 | 11 | - |
| exon-exon | RNA45SN1 | 21 | - | CRABP2 | 1 | + |
| exon-exon | COX1 | MT | - | SPIRE1 | 18 | + |
| exon-exon | E2F7 | 12 | - | MDC1 | 6 | - |
| exon-exon | ERBB2 | 17 | + | NOMO1 | 16 | + |
| exon-exon | ATP6 | MT | - | ATP8 | MT | - |
| exon-intron | RNA45SN1 | 21 | - | FP236383.3 | 21 | - |
| exon-intron | FAM204A | 10 | + | ARMH3 | 10 | + |
| exon-intron | AURKA | 20 | + | NBAS | 2 | - |
| exon-exon | COX3 | MT | - | RNA45SN3 | 21 | - |
| exon-exon | ND6 | MT | - | BEST1 | 11 | + |
| exon-exon | CYTB | MT | - | PHF14 | 7 | + |
| exon-exon | COX3 | MT | - | KRT4 | 12 | - |
| exon-exon | ND4 | MT | - | HNRNPK | 9 | + |
| exon-intron | ND4 | MT | - | CADPS2 | 7 | + |
| exon-intron | ND4 | MT | - | EIF2B3 | 1 | + |
| exon-intron | ND4 | MT | - | TAOK3 | 12 | - |
| exon-exon | ND2 | MT | - | ND5 | MT | - |
| exon-exon | RTN3 | 11 | - | ND4 | MT | - |
| exon-intron | COX1 | MT | - | NSMCE2 | 8 | + |
| exon-exon | ND4 | MT | - | LOC105378179 | 14 | - |
| intron-exon | FBXO30-DT | 6 | + | HECTD4 | 12 | - |
| exon-exon | KCNQ5 | 6 | - | KCNQ5 | 6 | + |
| exon-exon | ND6 | MT | - | ND5 | MT | - |
| exon-exon | COX1 | MT | - | MAMLD1 | X | - |
| exon-exon | ND2 | MT | - | GABARAP | 17 | - |
| exon-intron | ND5 | MT | - | DAP3 | 1 | + |
| exon-exon | RUVBL1 | 3 | - | TRIM14 | 9 | + |
| intron-exon | FERMT1 | 20 | + | ND4 | MT | - |
| intron-exon | LOC105370120 | 13 | + | ND4 | MT | - |
| intron-exon | ROBO1 | 3 | + | ITPRID2 | 2 | + |
| intron-exon | RNR1 | MT | - | PSG4 | 19 | + |
| exon-intron | LZIC | 1 | + | BBOX1-AS1 | 11 | - |
| exon-exon | ATP5F1B | 12 | - | PTMA | 2 | - |
| intron-exon | CEP192 | 18 | - | ND4 | MT | - |
| exon-exon | MAVS | 20 | - | PGK1 | X | + |
| exon-intron | COX1 | MT | - | EXT1 | 8 | + |
| exon-exon | NCL | 2 | + | HSPA8 | 11 | - |
| exon-exon | EEF1A1 | 6 | + | EEF1A1 | 6 | - |
| exon-exon | ATP6 | MT | - | MALAT1 | 11 | + |
| exon-intron | RNA45SN2 | 21 | + | RNA28SP | 21 | + |
| intron-exon | ZBTB25 | 14 | - | MTHFD1 | 14 | - |
| exon-intron | SLCO4A1 | 20 | - | HECA | 6 | + |
| exon-exon | ND4 | MT | - | ND4L | MT | - |
| exon-intron | NBPF18P | 1 | + | S100A11 | 1 | + |
| exon-exon | ND1 | MT | - | ND2 | MT | - |
| intron-exon | LINC01278 | X | + | CHKB-CPT1B | 22 | - |
| intron-exon | MCM6 | 2 | - | ATP6 | MT | - |
| exon-exon | DNMBP | 10 | - | ND5 | MT | - |
| exon-intron | COX2 | MT | - | ASH1L | 1 | - |
| exon-exon | RPLP1P4 | 2 | + | RNA45SN2 | 21 | + |
| exon-exon | KRT18 | 12 | - | STRN4 | 19 | + |
| exon-exon | COX1 | MT | - | MRPL22 | 5 | + |
| exon-exon | EEF1G | 11 | - | RNA45SN3 | 21 | + |
| exon-intron | ND2 | MT | - | MACROD2 | 20 | - |
| intron-exon | TMPRSS2 | 21 | - | ND5 | MT | - |
| exon-exon | DDX5 | 17 | - | PIK3CA | 3 | + |
| intron-exon | SHB | 9 | + | RNA45SN1 | 21 | + |
| intron-exon | RNA18SP5 | 21 | - | EIF4EBP2 | 10 | + |
| intron-exon | IKBKB | 8 | - | DLD | 7 | - |
| exon-intron | KRT14 | 17 | + | CHD9 | 16 | - |
| intron-exon | BABAM1 | 19 | - | ND4 | MT | - |
| exon-exon | ND6 | MT | - | ND4 | MT | - |
| exon-exon | DDOST | 1 | - | GAPDH | 12 | - |
| exon-intron | KRT18 | 12 | + | MPPE1 | 18 | + |
| exon-intron | ND4 | MT | - | LOC105375431 | 7 | - |
| exon-exon | RNA45SN1 | 21 | - | RPL7A | 9 | + |
| exon-exon | COX2 | MT | - | HNRNPU | 1 | - |
| intron-exon | RNR1 | MT | - | RHBDD2 | 7 | + |
| exon-exon | ND2 | MT | - | AP2M1 | 3 | + |
| exon-exon | RPL3P7 | 6 | + | DYNLL1 | 12 | + |
| intron-exon | RNR1 | MT | - | ITPRIPL2 | 16 | + |
| exon-intron | ND4 | MT | - | ZMYM6 | 1 | - |
| exon-exon | SOD2 | 6 | + | COL1A2 | 7 | + |
| intron-exon | ATP6V1G1 | 9 | - | HSPD1 | 2 | - |
| intron-exon | GPRC5A | 12 | - | HELB | 12 | - |
| intron-exon | RNA18SP5 | 21 | - | BTF3 | 5 | + |
| exon-intron | PKM | 15 | + | BCR | 22 | + |
| exon-exon | ND5 | MT | - | LCOR | 10 | - |
| exon-intron | TALAM1 | 11 | - | COX3 | MT | - |
| exon-intron | ATP6 | MT | - | ND2 | MT | - |
| intron-exon | RGPD2 | 2 | - | ATP6 | MT | - |
| exon-intron | RBM39 | 20 | - | DTNB | 2 | - |
| intron-exon | SH3BP4 | 2 | - | RNA45SN3 | 21 | + |
| exon-exon | ND5 | MT | - | ND1 | MT | - |
| exon-exon | SNRNP70 | 19 | + | GALT | 9 | + |
| exon-exon | RHOB | 2 | - | COX3 | MT | - |
| exon-exon | ND2 | MT | - | ATP6 | MT | - |
| exon-exon | RPL10P16 | 19 | + | RNA45SN3 | 21 | + |
| exon-exon | MUC12 | 7 | - | RNA45SN2 | 21 | + |
| exon-exon | ND1 | MT | - | RNA45SN3 | 21 | + |
| exon-intron | MYO1C | 17 | - | RNA18SP5 | 21 | - |
| exon-exon | RNA45SN1 | 21 | - | KRT7 | 12 | - |
| exon-exon | RNA45SN1 | 21 | - | KRT7 | 12 | - |
| exon-exon | RASGRF1 | 15 | + | EEF1A1P5 | 9 | - |
| exon-exon | CDK20 | 9 | + | POLR3H | 22 | - |
| intron-exon | AFAP1L2 | 10 | - | COX1 | MT | - |
| exon-exon | EEF1A1P6 | 7 | - | RPL32 | 3 | - |
| exon-exon | IFITM3 | 11 | - | VIM | 10 | + |
| exon-intron | ND1 | MT | - | RNR2 | MT | - |
| exon-exon | GAPDH | 12 | - | GAPDH | 12 | + |
| intron-exon | SAXO1 | 9 | - | PSMC3 | 11 | - |
| exon-exon | ND4 | MT | - | CEACAM5 | 19 | - |
| exon-exon | CZ1P-ASNS | 7 | - | ATP6 | MT | - |
| intron-exon | RFC2 | 7 | - | HSP90AA1 | 14 | + |
| intron-exon | MIPEPP3 | 13 | + | IGHG2 | 14 | + |
| exon-exon | RSRP1 | 1 | + | RNA45SN1 | 21 | - |
| exon-intron | ATP6 | MT | - | MSRA | 8 | + |
| exon-intron | ATP6 | MT | - | ATP8 | MT | - |
| exon-exon | GABRE | X | + | KRT16 | 17 | + |
| exon-exon | KRT8 | 12 | - | RPS3 | 11 | + |
| exon-exon | RNA45SN2 | 21 | - | HUWE1 | X | - |
| exon-exon | RNA45SN2 | 21 | - | PSMA4 | 15 | + |
| exon-exon | RNA45SN1 | 21 | - | FN1 | 2 | - |
| exon-exon | UBE2G1 | 17 | + | RNA45SN3 | 21 | + |
| exon-intron | ATP2A2 | 12 | - | LOC107986768 | 7 | - |
| exon-exon | SNRNP200 | 2 | + | COX1 | MT | - |
| exon-exon | ND6 | MT | - | COX1 | MT | - |
| exon-exon | ATP5F1A | 18 | + | ST13 | 22 | + |
| exon-intron | ND4 | MT | - | MGAT4A | 2 | - |
| intron-exon | MTATP6P1 | 1 | - | AP1B1 | 22 | - |
| exon-exon | RNA45SN2 | 21 | - | DAAM2 | 6 | + |
| exon-exon | COX3 | MT | - | ENO2 | 12 | + |
| exon-exon | RNA45SN1 | 21 | - | PEX6 | 6 | - |
| exon-exon | COX3 | MT | - | C1orf61 | 1 | - |
| exon-exon | RNA45SN1 | 21 | - | RPL10P16 | 19 | - |
| exon-exon | BAALC | 8 | - | RNA45SN1 | 21 | + |
| exon-exon | BRAF | 7 | - | ND4 | MT | - |
| exon-exon | AK1 | 9 | + | LAP3 | 4 | + |
| exon-exon | RPL8 | 8 | + | CEP131 | 17 | - |
| exon-exon | GAPDH | 12 | - | EEF2 | 19 | - |
| intron-exon | EP400 | 12 | - | RNA45SN3 | 21 | + |
| exon-exon | SMO | 7 | - | RPL19 | 17 | + |
| exon-intron | COX1 | MT | - | COTL1 | 16 | + |
| exon-exon | ND4 | MT | - | C2CD3 | 11 | - |
| exon-exon | PABPC1 | 8 | - | RNA45SN3 | 21 | - |
| exon-exon | ND5 | MT | - | TPM2 | 9 | - |
| exon-intron | ND4 | MT | - | RNR2 | MT | - |
| intron-exon | ND1 | MT | - | SRSF6 | 20 | + |
| exon-exon | SSR3 | 3 | + | ATP6 | MT | - |
| exon-intron | ATP6 | MT | - | ATP8 | MT | - |
| exon-exon | CEACAM5 | 19 | - | RNA45SN3 | 21 | - |
| exon-exon | ATP1A1 | 1 | - | ATP1A1 | 1 | + |
| exon-exon | RNA45SN2 | 21 | - | HSPA5 | 9 | - |
| exon-exon | KRT6C | 12 | + | KRT6A | 12 | + |
| intron-exon | CYP19A1 | 15 | - | EFTUD2 | 17 | + |
| exon-exon | RPLP0 | 12 | - | GCN1 | 12 | - |
| exon-exon | GABRE | X | - | CYTB | MT | - |
| exon-exon | ND5 | MT | - | ND1 | MT | - |
| exon-intron | COX1 | MT | - | LY75-CD302 | 2 | - |
| intron-exon | MTND2P28 | 1 | - | ND2 | MT | - |
| exon-exon | MAP3K12 | 12 | - | RNA45SN1 | 21 | - |
| exon-exon | COX1 | MT | - | HSP90AA1 | 14 | - |
| exon-exon | ND4 | MT | - | LOC101927325 | 7 | + |
| exon-exon | PSMC4 | 19 | - | PSMC4 | 19 | + |
| exon-exon | SIRT2 | 19 | + | CYTB | MT | - |
| exon-intron | WNK1 | 12 | - | SCAP | 3 | - |
| intron-exon | CHP1 | 15 | - | YWHAZ | 8 | - |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN1 | 21 | + |
| exon-intron | ND5 | MT | - | RNR1 | MT | - |
| exon-exon | SMPD2 | 6 | + | FTH1 | 11 | - |
| exon-exon | MTR | 1 | - | MTR | 1 | + |
| intron-exon | ND5 | MT | - | APP | 21 | - |
| intron-exon | ND5 | MT | - | YBX1 | 1 | + |
| intron-exon | RNA18SP5 | 21 | - | RNA45SN2 | 21 | - |
| exon-exon | DHPS | 19 | + | DHPS | 19 | - |
| exon-intron | CYTB | MT | - | GIMAP5 | 7 | - |
| intron-exon | PITPNC1 | 17 | + | PEX26 | 22 | + |
| exon-intron | SGPL1 | 10 | + | ND4 | MT | - |
| exon-exon | COX2 | MT | - | TMA7 | 3 | + |
| exon-exon | KRT6B | 12 | - | GAPDH | 12 | + |
| intron-exon | SCAMP4 | 19 | - | AXIN1 | 16 | - |
| intron-exon | PAX5 | 9 | - | RNA45SN3 | 21 | + |
| exon-exon | GAPDH | 12 | - | ATP6 | MT | - |
| exon-intron | ND5 | MT | - | RNR2 | MT | - |
| exon-exon | RPL8 | 8 | - | TM9SF4 | 20 | + |
| exon-intron | RNF26 | 11 | + | LINC00391 | 13 | + |
| exon-exon | TUBB2B | 6 | + | ND5 | MT | - |
| exon-exon | ND5 | MT | - | COX3 | MT | - |
| exon-exon | MTHFD1 | 14 | - | NPIPB4 | 16 | - |
| intron-exon | RNA28SP | 21 | + | GFOD2 | 16 | - |
| exon-exon | SNRNP200 | 2 | + | RNA45SN1 | 21 | + |
| exon-intron | ND4L | MT | - | ND4 | MT | - |
| exon-exon | COX1 | MT | - | PCDH1 | 5 | - |
| exon-intron | ND1 | MT | - | RNR2 | MT | - |
| exon-exon | MALAT1 | 11 | + | ND5 | MT | - |
| intron-exon | MTCO3P12 | 1 | - | COX3 | MT | - |
| exon-exon | LOC105371553 | 17 | + | KRT6B | 12 | + |
| exon-exon | KRT14 | 17 | + | KRT6B | 12 | + |
| exon-exon | ND4 | MT | - | COX2 | MT | - |
| exon-exon | ND4 | MT | - | ND4L | MT | - |
| exon-intron | CMTM3 | 16 | + | ARHGAP22 | 10 | + |
| exon-exon | COX1 | MT | - | AXL | 19 | - |
| exon-exon | TJP2 | 9 | - | ATP2C1 | 3 | - |
| exon-exon | KRT5 | 12 | + | KRT5 | 12 | - |
| exon-exon | LRP1 | 12 | - | RNA45SN2 | 21 | - |
| exon-intron | NEAT1 | 11 | + | C4orf19 | 4 | + |
| exon-exon | COX1 | MT | - | LTBP4 | 19 | + |
| exon-exon | CACUL1 | 10 | - | CACUL1 | 10 | + |
| intron-exon | ACSM1 | 16 | - | COX1 | MT | - |
| exon-exon | ATP6 | MT | - | PTPRF | 1 | + |
| exon-exon | OGDH | 7 | - | LMNA | 1 | - |
| exon-intron | AMBRA1 | 11 | + | PROSER2-AS1 | 10 | + |
| exon-exon | ABCF1 | 6 | + | LINC00641 | 14 | - |
| exon-intron | DNAH1 | 3 | - | DNAH1 | 3 | + |
| exon-exon | COX1 | MT | - | ATP6 | MT | - |
| exon-intron | C16orf86 | 16 | - | SLC16A10 | 6 | + |
| exon-intron | CDC42P6 | 4 | - | GBA3 | 4 | - |
| exon-intron | ND1 | MT | - | LOC107984245 | 10 | + |
| exon-exon | KRT16 | 17 | - | KRT14 | 17 | - |
| exon-exon | CYTB | MT | - | TUBA1A | 12 | - |
| exon-intron | ND5 | MT | - | ZNF841 | 19 | - |
| exon-exon | TALDO1 | 11 | - | TALDO1 | 11 | + |
| exon-exon | CYTB | MT | - | ATP6 | MT | - |
| exon-intron | CYP20A1 | 2 | - | ZNF251 | 8 | - |
| exon-exon | ILF3 | 19 | - | ILF3 | 19 | + |
| exon-exon | ATP6 | MT | - | ATP8 | MT | - |
| intron-exon | RNR1 | MT | - | FKBP1C | 6 | + |
| exon-intron | ND2 | MT | - | LHFPL2 | 5 | + |
| exon-exon | MYH9 | 22 | + | RNA45SN3 | 21 | + |
| exon-exon | FTLP2 | X | - | RNA45SN1 | 21 | + |
| exon-exon | TNFRSF1B | 1 | - | HSP90B1 | 12 | + |
| exon-intron | CYTB | MT | - | ND6 | MT | - |
| intron-exon | SORCS2 | 4 | + | ND4 | MT | - |
| exon-exon | KRT80 | 12 | + | OTUD7B | 1 | - |
| intron-exon | PCCA-DT | 13 | + | ND4 | MT | - |
| intron-exon | MMP1 | 11 | - | CREM | 10 | + |
| exon-exon | PTPN6 | 12 | - | CHD3 | 17 | - |
| exon-intron | RNA45SN1 | 21 | - | MON2 | 12 | + |
| intron-exon | OCIAD1 | 4 | - | SHISA5 | 3 | - |
| intron-exon | RNA18SP5 | 21 | - | RNA45SN2 | 21 | - |
| exon-intron | ND4 | MT | - | BAZ1B | 7 | + |
| exon-intron | MATR3 | 5 | + | PRKCH | 14 | - |
| exon-intron | ND1 | MT | - | AC005482.1 | 7 | - |
| exon-intron | CYTB | MT | - | SULF1 | 8 | - |
| exon-exon | COX1 | MT | - | ZBTB7A | 19 | - |
| exon-exon | ND4 | MT | - | ND4L | MT | - |
| exon-exon | COX3 | MT | - | ATP6 | MT | - |
| intron-exon | RGS7 | 1 | + | COX3 | MT | - |
| exon-exon | CYTB | MT | - | ND4 | MT | - |
| exon-exon | COX3 | MT | - | ATP6 | MT | - |
| exon-intron | ATP6 | MT | - | SHANK2 | 11 | - |
| exon-intron | ATP6 | MT | - | TCF7L2 | 10 | + |
| exon-intron | ND4 | MT | - | LOC100128340 | 5 | + |
| exon-intron | COX1 | MT | - | KRT7 | 12 | + |
| exon-exon | ND2 | MT | - | COX3 | MT | - |
| exon-exon | IFITM3 | 11 | - | RNA45SN1 | 21 | + |
| intron-exon | RNA18SP5 | 21 | - | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN3 | 21 | - | CLDN3 | 7 | + |
| exon-intron | COX1 | MT | - | SPON1-AS1 | 11 | + |
| exon-exon | RNA45SN3 | 21 | - | KRT5 | 12 | - |
| exon-intron | DPYD | 1 | - | DPYD-AS1 | 1 | + |
| exon-exon | PRKCZ | 1 | - | KRT18 | 12 | + |
| intron-exon | RNR1 | MT | - | MOCS3 | 20 | + |
| exon-exon | ND2 | MT | - | ND1 | MT | - |
| exon-exon | ND6 | MT | - | ND5 | MT | - |
| exon-exon | MMP11 | 22 | - | COX1 | MT | - |
| intron-exon | RNR2 | MT | - | MUC6 | 11 | + |
| intron-exon | P4HA2-AS1 | 5 | + | RNA45SN2 | 21 | + |
| intron-exon | TPCN1 | 12 | + | ND6 | MT | - |
| intron-exon | MAP4K4 | 2 | - | DELE1 | 5 | - |
| exon-exon | ND2 | MT | - | CALM1 | 14 | + |
| exon-intron | EEF2 | 19 | + | SPTBN1 | 2 | - |
| exon-intron | ATP6 | MT | - | RBFOX1 | 16 | + |
| exon-exon | ATP6 | MT | - | ND5 | MT | - |
| exon-exon | TMOD3 | 15 | - | ATP6 | MT | - |
| intron-exon | NGLY1 | 3 | + | ATP6 | MT | - |
| exon-exon | ND1 | MT | - | ATP6 | MT | - |
| intron-exon | APC | 5 | - | COX2 | MT | - |
| intron-exon | APC | 5 | - | COX2 | MT | - |
| exon-exon | COX3 | MT | - | LOC105378179 | 14 | - |
| exon-exon | ITPKC | 19 | - | RNA45SN1 | 21 | + |
| exon-exon | TKT | 3 | - | RNA45SN1 | 21 | + |
| exon-exon | MYO7B | 2 | - | MYO7B | 2 | + |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN3 | 21 | + |
| exon-exon | RNA45SN2 | 21 | - | RNA45SN2 | 21 | + |
| intron-exon | RNR1 | MT | - | RPL10 | X | + |
| exon-intron | PA2G4 | 12 | - | JAK1 | 1 | - |
| exon-exon | RNA45SN3 | 21 | - | GSK3A | 19 | + |
| exon-exon | ATP6 | MT | - | TUBB4A | 19 | + |
| exon-exon | ND1 | MT | - | ATP6 | MT | - |
| intron-exon | ECE1 | 1 | - | ECE1 | 1 | + |
| exon-intron | ND1 | MT | - | RNR2 | MT | - |
| exon-exon | ND5 | MT | - | ND6 | MT | - |
| exon-exon | ATP6 | MT | - | ND4 | MT | - |
| exon-exon | ND4 | MT | - | UBB | 17 | + |
| exon-exon | CYTB | MT | - | UPF2 | 10 | - |
| exon-intron | COX2 | MT | - | SGMS2 | 4 | + |
| exon-exon | COX2 | MT | - | EEF1B2 | 2 | + |
| exon-intron | ND4 | MT | - | SELENOO | 22 | - |
| intron-exon | RNR1 | MT | - | CSH2 | 17 | - |
| exon-intron | ND5 | MT | - | MEG8 | 14 | + |
| exon-exon | ND4 | MT | - | CSH1 | 17 | - |
| exon-exon | RNA45SN2 | 21 | - | RNA45SN3 | 21 | + |
| exon-intron | DYNC1H1 | 14 | + | MKLN1 | 7 | + |
| exon-intron | CEACAM4 | 19 | + | EPS15L1 | 19 | + |
| exon-exon | ND5 | MT | - | NEAT1 | 11 | + |
| exon-exon | ATP1B1 | 1 | - | SHISA5 | 3 | - |
| exon-exon | FDFT1 | 8 | - | COX1 | MT | - |
| intron-exon | PMM2 | 16 | - | ZNF24 | 18 | - |
| exon-exon | RNA45SN1 | 21 | - | PLCB3 | 11 | + |
| exon-intron | RNA45SN1 | 21 | - | EFCAB11 | 14 | + |
| exon-intron | LOC107984992 | 17 | - | AC002064.1 | 7 | - |
| intron-exon | GAS7 | 17 | + | GABRE | X | - |
| exon-intron | ECHDC2 | 1 | + | FMR1 | X | - |
| exon-intron | ND5 | MT | - | ZNRF3 | 22 | + |
| exon-intron | RNA45SN3 | 21 | - | LRCH1 | 13 | + |
| exon-intron | RNA45SN1 | 21 | - | LRCH1 | 13 | + |
| intron-exon | XXYLT1 | 3 | - | ZNF142 | 2 | - |
| exon-exon | RANBP3 | 19 | + | RNA45SN2 | 21 | + |
| intron-exon | LOC110467535 | 20 | - | RNA45SN3 | 21 | - |
| exon-intron | LOC105376358 | 10 | - | AC023034.1 | 15 | - |
| exon-exon | RNA45SN1 | 21 | - | CD99 | Y | - |
| exon-exon | ND4 | MT | - | FTH1P12 | 9 | + |
| exon-intron | SAFB2 | 19 | - | ANTXR2 | 4 | - |
| exon-intron | C12orf50 | 12 | - | ATP9B | 18 | - |
| exon-exon | ND2 | MT | - | ATP6 | MT | - |
| exon-intron | ATP6 | MT | - | SMG7 | 1 | - |
| intron-exon | ASMTL-AS1 | Y | + | COX1 | MT | - |
| exon-exon | KRT17 | 17 | + | NIN | 14 | - |
| exon-exon | ND4 | MT | - | MDH2 | 7 | + |
| exon-intron | COX1 | MT | - | RNR1 | MT | - |
| exon-exon | ATP6 | MT | - | CYTB | MT | - |
| exon-intron | CYTB | MT | - | PATL1 | 11 | + |
| exon-intron | ND5 | MT | - | LOC105378641 | 1 | + |
| exon-exon | RNA45SN2 | 21 | - | RNA45SN3 | 21 | - |
| exon-exon | APTX | 9 | + | RNA45SN3 | 21 | + |
| intron-exon | GRIP1 | 12 | - | DPY19L2 | 12 | - |
| exon-exon | RNA45SN2 | 21 | - | CSH2 | 17 | - |
| exon-intron | COX2 | MT | - | TMCC1 | 3 | - |
| intron-exon | MCTS1 | X | - | CUL4B | X | - |
| exon-exon | COX2 | MT | - | CGNL1 | 15 | + |
| exon-exon | ND6 | MT | - | COX1 | MT | - |
| exon-exon | ND4 | MT | - | COX2 | MT | - |
| exon-intron | PMS2P2 | 7 | - | AC211476.5 | 7 | + |
| exon-exon | ATP8 | MT | - | ATP6 | MT | - |
| exon-intron | ATP6 | MT | - | ARPIN-AP3S2 | 15 | + |
| intron-exon | RNR1 | MT | - | HNRNPU | 1 | - |
| intron-exon | RNR1 | MT | - | TOMM6 | 6 | + |
| intron-exon | RNR1 | MT | - | ZNF316 | 7 | - |
| exon-intron | RNA45SN3 | 21 | - | SYT1 | 12 | - |
| exon-exon | ATAD5 | 17 | - | TEFM | 17 | - |
| intron-exon | RBM10 | X | - | RNA45SN3 | 21 | - |
| exon-exon | RNA45SN2 | 21 | - | SPSB3 | 16 | - |
| exon-exon | ND1 | MT | - | PRKAR2A | 3 | - |
| exon-exon | SQSTM1 | 5 | - | RNA45SN1 | 21 | + |
| exon-exon | FAAH2 | X | + | LNPEP | 5 | + |
| exon-exon | ND6 | MT | - | ND5 | MT | - |
| intron-exon | TPT1-AS1 | 13 | + | CYTB | MT | - |
| exon-exon | ND4 | MT | - | COX2 | MT | - |
| exon-exon | FBLN7 | 2 | + | COX2 | MT | - |
| intron-exon | UGGT2 | 13 | + | SLC26A2 | 5 | - |
| exon-exon | ANXA7 | 10 | - | RNA45SN3 | 21 | + |
| intron-exon | TMEM217 | 6 | - | TMLHE-AS1 | X | + |
| exon-exon | COX2 | MT | - | KRT5 | 12 | + |
| exon-exon | RNA45SN3 | 21 | - | RNA45SN2 | 21 | - |
| intron-exon | RNA18SP5 | 21 | - | RNA45SN1 | 21 | + |
| intron-exon | HNRNPH3 | 10 | + | CYTB | MT | - |
| exon-exon | RPL27P6 | 2 | + | ND2 | MT | - |
| exon-exon | ND6 | MT | - | GANAB | 11 | - |
| intron-exon | RNR2 | MT | - | RNA45SN3 | 21 | + |
| intron-exon | MGAT5 | 2 | - | CYTB | MT | - |
| exon-intron | ND4 | MT | - | DNAJB12 | 10 | - |
| exon-exon | ATP6 | MT | - | ND4 | MT | - |
| intron-exon | CDC5L | 6 | + | ND4 | MT | - |
| exon-exon | ND4 | MT | - | EIF4G2 | 11 | - |
| intron-exon | MIR100HG | 11 | + | INS-IGF2 | 11 | - |
| exon-intron | SPDYE11 | 7 | - | ZNF664 | 12 | + |
| exon-exon | ATP6 | MT | - | ING1 | 13 | + |
| exon-exon | RNA45SN3 | 21 | - | RNA45SN2 | 21 | - |
| exon-exon | ATP6 | MT | - | ATP8 | MT | - |
| exon-exon | ATP6 | MT | - | DHX9 | 1 | - |
| exon-exon | RPL37A-DT | 2 | + | KRT5 | 12 | + |
| exon-exon | RPL36 | 19 | - | RNA45SN3 | 21 | + |
| exon-exon | CYTB | MT | - | ATP6V1G2-DDX39B | 6 | - |
| exon-exon | ATP8 | MT | - | BPTF | 17 | + |
| exon-exon | ATP6 | MT | - | RNF11 | 1 | + |
| exon-exon | COX1 | MT | - | PPP1CB | 2 | + |
| exon-exon | ND4 | MT | - | JADE1 | 4 | + |
| exon-intron | CYTB | MT | - | AC105036.3 | 15 | - |
| intron-exon | ZNF551 | 19 | - | ZNF154 | 19 | + |
| intron-exon | COMMD1 | 2 | - | TENT2 | 5 | + |
| exon-intron | NUP43 | 6 | - | LINC01895 | 18 | + |
| intron-exon | NFIA | 1 | + | ATP6 | MT | - |
| exon-intron | RNA45SN2 | 21 | - | LOC110467536 | 20 | + |
| exon-exon | ADH5 | 4 | + | ADH5 | 4 | - |
| exon-intron | ND4 | MT | - | ZNF473 | 19 | + |
| exon-intron | KIAA1109 | 4 | + | L3MBTL2 | 22 | + |
| exon-exon | COX2 | MT | - | TSPYL2 | X | + |
| exon-intron | GPX3 | 5 | - | NSMCE1 | 16 | - |
| exon-exon | ND5 | MT | - | TG | 8 | - |
| exon-exon | ND4 | MT | - | BRPF3 | 6 | - |
| exon-intron | LOC105372898 | 1 | - | BDKRB2 | 14 | - |
| exon-exon | MPZL3 | 11 | - | RPL8 | 8 | + |
| exon-exon | PSMC5 | 17 | + | PSMC5 | 17 | - |
| exon-intron | MTMR4 | 17 | + | PPP2R2B | 5 | + |
| exon-exon | ND4 | MT | - | ND5 | MT | - |
| exon-exon | RPL10 | X | - | RNA45SN3 | 21 | + |
| intron-exon | RPH3AL | 17 | - | COX1 | MT | - |
| exon-intron | SPEN | 1 | - | HFM1 | 1 | - |
| exon-exon | GAPDH | 12 | - | GAPDH | 12 | + |
| exon-exon | EEF1A1 | 6 | + | CYTB | MT | - |
| exon-intron | FSCN1 | 7 | + | RNA28SP | 21 | + |
| exon-exon | ND4 | MT | - | BAZ1A | 14 | - |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN1 | 21 | + |
| exon-exon | ND1 | MT | - | ND6 | MT | - |
| exon-exon | RPL18A | 19 | + | COX2 | MT | - |
| exon-exon | ND4 | MT | - | TALAM1 | 11 | - |
| exon-exon | EEF1A1 | 6 | - | HERPUD1 | 16 | + |
| intron-exon | DESI1 | 22 | + | GFAP | 17 | - |
| exon-exon | CLU | 8 | + | RNA45SN2 | 21 | + |
| exon-exon | ND5 | MT | - | ND6 | MT | - |
| exon-exon | CANX | 5 | + | ATP6 | MT | - |
| intron-exon | MTCO3P12 | 1 | - | APOL1 | 22 | + |
| intron-exon | RP11-507B12.2 | 15 | + | LOC107984782 | 15 | + |
| exon-intron | CYTB | MT | - | C2CD3 | 11 | - |
| exon-intron | ZBED4 | 22 | + | FAHD2A | 2 | - |
| exon-intron | CALR | 19 | - | CALD1 | 7 | + |
| exon-intron | PCNX2 | 1 | - | TANGO6 | 16 | - |
| intron-exon | RNR2 | MT | - | VPS9D1 | 16 | + |
| exon-intron | DAZAP2 | 12 | - | RNR1 | MT | - |
| exon-intron | SDK1 | 7 | + | JPH2 | 20 | + |
| intron-exon | LRP12 | 8 | + | COX1 | MT | - |
| exon-intron | TAGLN2 | 1 | + | AC129926.2 | 17 | + |
| exon-exon | ND4 | MT | - | LAD1 | 1 | - |
| exon-intron | ND4 | MT | - | POM121C | 7 | - |
| intron-exon | PDE4D | 5 | + | ND4 | MT | - |
| exon-intron | KPNA4 | 3 | + | PLXNC1 | 12 | + |
| intron-exon | KRT17 | 17 | - | KRT16 | 17 | - |
| exon-intron | LOC105378179 | 14 | - | PTPRN2 | 7 | - |
| intron-exon | RNA28SP | 21 | + | BEX3 | X | + |
| exon-exon | ND5 | MT | - | ND6 | MT | - |
| exon-exon | FRYL | 4 | - | PRRX1 | 1 | + |
| exon-exon | DCN | 12 | - | CRIPAK | 4 | + |
| intron-exon | NECTIN1 | 11 | - | ZFP36L1 | 14 | - |
| exon-exon | MICOS10-NBL1 | 1 | - | MICOS10-NBL1 | 1 | + |
| exon-intron | LOC107987063 | 9 | + | AL162231.2 | 9 | + |
| exon-exon | LOC645086 | | + | C11orf58 | 11 | + |
| exon-exon | ADI1 | 2 | + | ADI1 | 2 | - |
| exon-intron | SRSF7 | 2 | - | ARHGEF28 | 5 | + |
| intron-exon | ARHGEF28 | | + | CAPNS1 | 19 | + |
| exon-exon | RNA45SN1 | 21 | + | SCYL1 | 11 | + |
| exon-exon | EDEM3 | 1 | + | EDEM3 | 1 | - |
| exon-intron | GSN | 9 | - | LOC112268260 | 1 | + |
| exon-exon | CORO2A | 9 | + | CORO2A | 9 | - |
| exon-intron | EIF4EBP2 | 10 | + | SPDYE10P | 7 | + |
| exon-exon | DCTN6 | 8 | + | GTF2E2 | 8 | + |
| exon-exon | FAM193A | 4 | + | SGSM2 | 17 | + |
| exon-exon | TM9SF4 | 20 | - | TM9SF4 | 20 | + |
| exon-exon | SNUPN | 15 | - | PTPN9 | 15 | - |
| exon-exon | RNA45SN2 | 21 | + | EMP1 | 12 | + |
| exon-exon | MSI2 | 17 | + | ALDH3A1 | 17 | - |
| intron-exon | ENO1-AS1 | 1 | - | EDARADD | 1 | + |
| exon-exon | CYBRD1 | 2 | - | CYBRD1 | 2 | + |
| exon-exon | ERAP1 | 5 | - | CAST | 5 | + |
| exon-exon | RNA45SN2 | 21 | + | CD81 | 11 | + |
| exon-exon | RYK | | + | RYK | | - |
| exon-exon | CIPC | 14 | + | CPM | 12 | - |
| exon-exon | RNA45SN2 | 21 | + | KERA | | - |
| exon-exon | PPL | 16 | - | UBN1 | 16 | - |
| exon-exon | PPP1R15B | 1 | + | PPP1R15B | 1 | - |
| exon-intron | DHX36 | | - | MIR924HG | | - |
| exon-exon | HNRNPH1 | 5 | + | HNRNPH1 | 5 | - |
| exon-exon | SFPQ | 1 | - | MFSD4A | | + |
| exon-intron | HNRNPK | 9 | - | ZSWIM7 | 17 | - |
| exon-exon | RNA45SN3 | 21 | + | TACC3 | 4 | + |
| exon-exon | NR6A1 | 9 | + | NR6A1 | 9 | - |
| intron-exon | RNA18SP5 | 21 | + | IFT172 | | - |
| exon-exon | CIZ1 | 9 | + | CIZ1 | 9 | - |
| exon-intron | CCNB1 | 5 | + | DPY30 | 2 | - |
| exon-exon | ZNF521 | 18 | - | RPSA | 3 | + |
| exon-exon | ANKRD39 | 2 | - | ANKRD23 | 2 | - |
| exon-exon | NUTM2A-AS1 | 10 | - | GNAS | 20 | + |
| exon-intron | PRPSAP2 | 17 | + | TMEM268 | | - |
| exon-exon | ZNF337-AS1 | 20 | - | NANP | | - |
| exon-exon | PGD | 1 | + | ZNF335 | 20 | - |
| exon-intron | TSPAN3 | 15 | - | SLC35F3 | 1 | - |
| exon-intron | UBE2CP5 | 19 | - | ZNF814 | 19 | - |
| exon-intron | MED15P1 | 14 | + | MED15P1 | 14 | - |
| intron-exon | DET1 | 15 | + | RAD52 | 12 | - |
| exon-intron | TMSB15B | X | + | H2BW4P | | + |
| exon-exon | MAFG | 17 | - | SETD1B | 12 | + |
| exon-exon | B4GALT5 | 20 | - | CKB | 14 | - |
| exon-exon | TUBB | 6 | - | UBL4A | X | - |
| exon-exon | LOC107985263 | 1 | - | SMYD2 | 1 | - |
| intron-exon | C5orf38 | | - | IRX2 | 5 | - |
| exon-exon | RPLP1 | 15 | + | ASH2L | 8 | + |
| exon-exon | ATP8 | MT | - | GRHPR | 9 | + |
| intron-exon | CPSF4L | 17 | - | MYCN | 2 | + |
| exon-exon | ND1 | MT | - | FLII | 17 | - |
| exon-exon | KDM2B | 12 | + | DDX46 | 5 | + |
| exon-exon | ITFG1 | 16 | - | NETO2 | 16 | - |
| exon-exon | RPL8 | 8 | - | ACIN1 | 14 | - |
| exon-exon | SNAPC4 | 9 | - | CYP27A1 | 2 | + |
| exon-exon | SLC25A29 | 14 | - | YY1 | 14 | - |
| exon-exon | ZNF566 | 19 | - | EFTUD2 | 17 | - |
| intron-exon | RPS18P3 | 1 | - | YLPM1 | 14 | + |
| intron-exon | AC064802.1 | | + | LOC105375710 | | + |
| exon-intron | HS3ST4 | 16 | + | ATP5MC2 | 12 | - |
| exon-intron | OGFOD3 | | - | SMARCA4 | 19 | + |
| exon-exon | CLN8 | 8 | + | NMT1 | 17 | + |
| exon-exon | RNU6-2 | 19 | + | NXF1 | 11 | - |
| exon-exon | GPLD1 | 6 | - | MRS2 | | - |
| exon-exon | NPM1 | 5 | + | NCK2 | | + |
| exon-intron | LINC02301 | | + | LINC02211 | | - |
| exon-intron | LOC105379506 | 21 | + | LOC107986666 | 6 | + |
| exon-intron | RPL7A | 9 | + | SMOC1 | 14 | - |
| exon-exon | PDIA5 | 3 | + | SLC25A5 | X | + |
| exon-intron | OIP5-AS1 | 15 | + | OIP5 | | + |
| exon-intron | INO80B | 2 | + | WBP1 | 2 | + |
| exon-intron | GBX2 | | + | ASB18 | | + |
| exon-exon | UBE2S | 19 | - | IDI1 | 10 | - |
| exon-exon | LOC101927572 | 19 | + | WARS1 | 14 | - |
| exon-exon | FBXO5 | | + | MTRF1L | 6 | + |
| exon-exon | CDC42 | 1 | + | ABCF2 | 7 | - |
| exon-intron | LOC107984737 | | - | AC100830.1 | | - |
| exon-exon | NOP9 | | + | LTB4R | 14 | + |
| exon-intron | ZNF207 | 17 | + | PHC1 | 12 | + |
| exon-exon | RPL3 | 22 | - | BCL2L2-PABPN1 | 14 | + |
| exon-exon | SSRP1 | 11 | - | FADS2 | 11 | + |
| exon-exon | MCM4 | 8 | + | AP2M1 | 3 | + |
| intron-exon | LINC00458 | | + | GNAS | 20 | + |
| exon-exon | H1-3 | 6 | - | HSPA8 | 11 | - |
| exon-exon | RAD21 | 8 | - | ZC4H2 | X | - |
| exon-exon | LOC107986638 | 6 | + | HDAC2-AS2 | 6 | + |
| exon-exon | SMAD3 | 15 | + | AAGAB | 15 | - |
| exon-exon | CPSF4 | | + | FAM50A | X | + |
| exon-exon | CAPN10 | 2 | - | CAPN10 | 2 | + |
| exon-exon | KANSL1 | 17 | - | ARL17A | 17 | - |
| exon-exon | LOC105378819 | | - | CTBS | 1 | - |
| intron-exon | TSEN54 | 17 | + | CHCHD7 | 8 | + |
| exon-exon | FUS | 16 | + | MAEA | 4 | + |
| exon-exon | PRNP | 20 | - | PRNP | 20 | + |
| exon-intron | ATP1A1 | 1 | + | PHIP | 6 | + |
| exon-exon | RPS20 | 8 | - | RPS24 | 10 | + |
| exon-exon | MRPS30 | 5 | - | MRPS30 | 5 | + |
| exon-intron | DNAJC3-DT | 13 | + | APOO | X | - |
| exon-exon | HSP90AA1 | 14 | + | ITIH2 | 10 | + |
| exon-exon | HNRNPU | 1 | - | RPL24 | 3 | - |
| exon-exon | ZEB1 | 10 | + | SIK1 | 21 | - |
| exon-exon | ADCYAP1R1 | 7 | - | ADCYAP1R1 | 7 | + |
| intron-exon | ARL10 | 5 | - | MASP1 | | - |
| exon-exon | TRAV1-1 | 14 | + | TRAJ29 | | + |
| exon-intron | RNF187 | 1 | - | AC024230.1 | 4 | - |
| intron-exon | ESF1 | 20 | + | RNASE1 | 14 | - |
| intron-exon | MEF2A | 15 | - | PCSK6 | 15 | - |
| exon-exon | LOC105373102 | Y | + | LINC00106 | X | + |
| intron-exon | PLPP3 | 1 | - | PRRC2C | 1 | - |
| exon-exon | THPO | 3 | + | THPO | 3 | - |
| exon-intron | PMS2P4 | 7 | - | TYW1 | 7 | - |
| intron-exon | PMS2P1 | 7 | - | GABRA2 | | - |
| exon-intron | SYT11 | 1 | + | HMGB1 | 13 | - |
| exon-exon | ONECUT1 | 15 | - | ITIH4 | 3 | - |
| intron-exon | LSAMP | 3 | - | CRHR2 | 7 | + |
| exon-intron | SLC35E2B | 1 | + | ADD1 | 4 | - |
| intron-exon | ANKRD11 | 16 | - | RNF11 | 1 | - |
| exon-exon | G3BP1 | 5 | - | B3GAT1 | 11 | - |
| exon-intron | FAM107A | 3 | - | SRD5A2 | 2 | + |
| intron-exon | STAG2 | X | + | SNRNP200 | 2 | + |
| exon-intron | NUCKS1 | 1 | + | MICAL3 | 22 | + |
| exon-intron | SLA | 8 | - | LOC112267988 | 7 | + |
| exon-intron | ZFP3 | 17 | - | SVIL | 10 | - |
| exon-exon | PFN2 | 3 | - | PFN2 | 3 | + |
| intron-exon | KLHL7 | 7 | - | CRKL | 22 | + |
| exon-intron | DHX34 | | + | PTPRT | | + |
| exon-exon | PLXNA1 | 3 | - | UQCRH | 1 | + |
| intron-exon | PANX3 | 11 | - | MAX | 14 | - |
| exon-exon | RPL37P2 | 11 | + | MAPK1 | 22 | - |
| exon-intron | NNAT | 20 | + | CNPY3-GNMT | 6 | - |
| exon-exon | GPR27 | 3 | + | H3-3A | 1 | + |
| exon-exon | MALAT1 | 11 | + | ZNF292 | 6 | + |
| exon-exon | MYO1D | 17 | + | SCAF8 | 6 | + |
| exon-exon | PAM | 5 | - | ND3 | MT | + |
| exon-exon | PCDHB12 | 5 | + | MYOZ2 | 4 | + |
| intron-exon | TMSB4X | X | - | PPIA | 7 | + |
| exon-exon | RPS17P16 | 22 | - | ZSCAN25 | 7 | + |
| exon-exon | PCBP1 | 2 | - | CCDC6 | 10 | - |
| exon-exon | TPT1 | 13 | + | NDEL1 | 17 | + |
| exon-exon | RPL18 | 19 | + | EGR3 | 8 | - |
| exon-exon | ST13 | 22 | + | BLZF1 | 1 | + |
| intron-exon | LOC112268416 | 2 | + | HSPA1A | 6 | + |
| exon-exon | ZNF320 | 19 | + | RGS5 | 1 | - |
| exon-exon | IGFBP7 | 4 | + | RPS13P2 | 1 | - |
| exon-intron | SERINC1 | 6 | + | ADAMTSL1 | 9 | + |
| exon-exon | JUNB | 19 | - | RGS5 | 1 | - |
| exon-exon | C1QBP | 17 | - | LYSMD3 | 5 | - |
| exon-exon | LATS2 | 13 | - | TXN | 9 | - |
| exon-exon | RPL26 | 17 | + | LAPTM4A | 2 | - |
| exon-intron | TGM2 | 20 | - | LOC105376080 | 9 | - |
| intron-exon | POC1B | 12 | - | SERPINE1 | 7 | + |
| exon-exon | LOC101928307 | 6 | + | PCLO | 7 | + |
| exon-exon | LOC107987135 | 9 | - | CAAP1 | 9 | - |
| exon-exon | PCSK1N | X | + | SKA2 | 17 | - |
| exon-exon | FEM1B | 15 | - | SATB2 | 2 | + |
| exon-intron | DHFR | 5 | + | MSH3 | 5 | + |
| exon-exon | ZNF71-SMIM17 | 19 | - | ZNF71-SMIM17 | 19 | + |
| exon-exon | FAF1 | 1 | + | LACTB | 15 | + |
| exon-exon | OXR1 | 8 | - | CAV1 | 7 | + |
| exon-exon | ANTXR1 | 2 | - | CALHM5 | 6 | + |
| exon-exon | RAD18 | 3 | + | LSM3 | 3 | + |
| exon-exon | PRDM16-DT | 1 | + | PBX1 | 1 | + |
| intron-exon | THAP12 | 11 | - | THAP12 | 11 | + |
| intron-exon | COL4A1 | 13 | - | SUPT7L | 2 | - |
| exon-exon | COL8A1 | 3 | - | TNS1 | 2 | - |
| exon-exon | DIP2A | 21 | + | MOB1A | 2 | - |
| exon-intron | LATS1 | 6 | + | DANT2 | X | - |
| exon-exon | GUCY1B1 | 4 | - | PEG10 | 7 | + |
| intron-exon | SOX5 | 12 | - | EPC1 | 10 | - |
| exon-intron | ARPC5 | 1 | + | MSRA | 8 | + |
| exon-exon | TRAPPC1 | 17 | - | PRKCE | 2 | + |
| exon-exon | SRRM1 | 1 | + | P2RY12 | 3 | - |
| intron-exon | TVP23C | 17 | - | CDRT4 | 17 | - |
| exon-exon | UTRN | 6 | + | UTRN | 6 | - |
| exon-exon | ATP6V0C | 16 | - | ATP6V0C | 16 | + |
| exon-exon | RHCE | 1 | - | TMEM50A | 1 | + |
| exon-exon | SEC23A | 14 | - | SEC23A | 14 | + |
| exon-exon | CTTNBP2NL | 1 | - | CTTNBP2NL | 1 | + |
| exon-exon | GPRC5C | 17 | - | GPRC5C | 17 | + |
| exon-exon | GPRC5C | 17 | - | GPRC5C | 17 | + |
| intron-exon | RAB3GAP2 | 1 | - | MORF4L1P1 | 1 | + |
| exon-exon | TRAPPC8 | 18 | + | TRAPPC8 | 18 | - |
| exon-exon | LOC101927550 | 7 | + | PPARG | 3 | + |
| exon-exon | CALR | 19 | - | CALR | 19 | + |
| intron-exon | CCSER1 | 4 | + | SC5D | 11 | + |
| intron-exon | ERG | 21 | - | SETD4 | 21 | - |
| exon-intron | RIPPLY3 | 21 | + | HLCS | 21 | - |
| exon-exon | MALAT1 | 11 | + | HSP90AA1 | 14 | - |
| exon-exon | ITGA9-AS1 | 3 | + | CTDSPL | 3 | + |
| exon-exon | EIF4E3 | 3 | + | FCN3 | 1 | - |
| exon-exon | LOC100506358 | 14 | - | PFDN5 | 12 | + |
| exon-exon | FSTL1 | 3 | - | ARL8B | 3 | - |
| exon-exon | CCDC6 | 10 | - | RET | 10 | + |
| exon-exon | EIF3E | 8 | - | GTSE1 | 22 | + |
| exon-exon | HNRNPD | 4 | - | ND4L | MT | + |
| intron-exon | AC114316.2 | 5 | + | LOC105379080 | 5 | + |
| exon-exon | NONO | X | + | EXOSC2 | 9 | + |
| exon-exon | SIRT4 | 12 | - | RSL1D1 | 16 | - |
| exon-exon | RNVU1-18 | 1 | - | TMBIM6 | 12 | + |
| exon-exon | SYBU | 8 | - | ND4 | MT | + |
| exon-exon | RNA45SN3 | 21 | + | AVPI1 | 10 | - |
| intron-exon | RNR2 | MT | + | MRM2 | 7 | - |
| exon-exon | RNA45SN2 | 21 | + | HYAL2 | 3 | - |
| intron-exon | STAT5B | 17 | + | TBX19 | 1 | + |
| exon-exon | GLIDR | 9 | - | NOL11 | 17 | + |
| intron-exon | LOC106799834 | 8 | - | CYP11B1 | 8 | - |
| exon-intron | CHGB | 20 | + | CYP17A1 | 10 | - |
| exon-intron | WNT8B | 10 | - | OLMALINC | 10 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CBWD3 | 9 | + | CNTLN | 9 | + |
| exon-exon | VPS50 | 7 | + | MATR3 | 5 | + |
| exon-intron | RNA45SN2 | 21 | + | KCNC4 | 1 | + |
| exon-exon | SORBS2 | 4 | - | PLAGL1 | 6 | - |
| exon-exon | RNA45SN1 | 21 | + | LAP3 | 4 | + |
| exon-exon | DAZAP2 | 12 | + | CDIPT | 16 | - |
| exon-exon | SRC | 20 | + | REPIN1 | 7 | + |
| exon-exon | ABI1 | 10 | - | YME1L1 | 10 | - |
| exon-intron | EID1 | 15 | + | RNR2 | MT | + |
| intron-exon | AC115618.1 | X | + | RBM3 | X | + |
| exon-exon | COBLL1 | 2 | - | SMAD4 | 18 | + |
| exon-exon | IDE | 10 | + | KIF11 | 10 | + |
| exon-exon | RNA45SN1 | 21 | + | VIM | 10 | + |
| exon-exon | BLMH | 17 | - | LRRC37A16P | 17 | - |
| exon-exon | LMCD1 | 3 | + | PBX3 | 9 | + |
| exon-exon | IGFBP3 | 7 | - | DPP7 | 9 | - |
| exon-exon | PSMA4 | 15 | + | NEXN | 1 | + |
| exon-intron | SPG21 | 15 | - | NFE2L2 | 2 | - |
| exon-exon | RNU6-1 | 15 | - | ARFGAP3 | 22 | - |
| exon-exon | RNU6-3P | X | - | HIPK3 | 11 | + |
| exon-exon | EIF4A2 | 3 | + | TGFBI | 5 | + |
| exon-exon | ZFAND1 | 8 | - | IMPA1 | 8 | - |
| exon-intron | WI2-87327B8.2 | 20 | - | BX640514.2 | 20 | - |
| intron-exon | RNU6-9 | 19 | + | ENC1 | 5 | - |
| exon-exon | VPS26A | 10 | + | ATAD1 | 10 | - |
| exon-intron | KNSTRN | 15 | + | EIF3C | 16 | + |
| exon-exon | RNU6-9 | 19 | + | SPON1 | 11 | - |
| exon-exon | TSN | 2 | + | ALKBH5 | 17 | + |
| exon-exon | RNA45SN2 | 21 | + | UBC | 12 | - |
| intron-exon | RNR2 | MT | + | NTNG1 | 1 | + |
| exon-exon | LOC105375001 | 6 | + | FSCN1 | 7 | + |
| exon-exon | RNA5S1 | 1 | - | CRTAP | 3 | + |
| exon-exon | SLX4IP | 20 | + | GNAS | 20 | + |
| exon-exon | UBAP2 | 9 | - | MLH1 | 3 | + |
| exon-exon | EIF3L | 22 | + | MTUS1 | 8 | - |
| intron-exon | LOC107985942 | 2 | + | HSD17B11 | 4 | - |
| intron-exon | LOC105370449 | 14 | - | EEF1A1P5 | 9 | + |
| exon-exon | EHF | 11 | + | GDI2 | 10 | - |
| intron-exon | LOC113839540 | 9 | - | CARD9 | 9 | - |
| exon-intron | ABHD18 | 4 | + | LARP1B | 4 | + |
| intron-exon | LOC107984778 | 15 | + | CRAT37 | 15 | + |
| exon-exon | CLASP1 | 2 | - | NFYC | 1 | + |
| exon-exon | SNORD3A | 17 | + | ENO1 | 1 | - |
| exon-exon | LIMA1 | 12 | - | SLC35F5 | 2 | - |
| exon-exon | ZNF271P | 18 | + | LOC107985139 | 18 | + |
| intron-exon | LOC643711 | 12 | + | RNF20 | 9 | + |
| exon-exon | RNA45SN3 | 21 | + | SERPINA3 | 14 | + |
| exon-exon | RPS25 | 11 | - | CPA1 | 7 | + |
| intron-exon | SEC22B4P | 1 | + | MYH14 | 19 | + |
| intron-exon | LOC105370449 | 14 | - | PARP14 | 3 | + |
| intron-exon | LOC112529894 | 17 | + | LOC107985004 | 17 | + |
| intron-exon | ALDH16A1 | 19 | - | PIH1D1 | 19 | - |
| exon-exon | H3-3B | 17 | - | ND4L | MT | + |
| exon-exon | RNA45SN1 | 21 | + | BGN | X | + |
| exon-exon | ENTPD6 | 20 | + | CGNL1 | 15 | + |
| exon-intron | LOC105370781 | 15 | - | LINC02694 | 15 | - |
| exon-exon | RPL14 | 3 | + | MED15 | 22 | + |
| intron-exon | LOC107984778 | 15 | + | CRAT37 | 15 | + |
| exon-exon | OTULINL | 5 | + | DHCR24 | 1 | - |
| exon-exon | LOC105378929 | 1 | - | GABRE | X | - |
| exon-exon | RNA5S14 | 1 | - | IGFBP5 | 2 | - |
| exon-intron | RNA45SN2 | 21 | + | CRTAP | 3 | + |
| exon-exon | RNA45SN1 | 21 | + | EIF4G2 | 11 | - |
| exon-intron | LOC105375170 | 7 | + | AHR | 7 | + |
| exon-exon | SLC25A44 | 1 | + | SLC20A2 | 8 | - |
| intron-exon | RNA5-8SP10 | 21 | + | HSP90AB1 | 6 | + |
| exon-exon | FBXO38 | 5 | + | RNF216 | 7 | - |
| exon-exon | RNA45SN3 | 21 | + | LUC7L2 | 7 | + |
| exon-exon | RNU4-2 | 12 | - | CADPS2 | 7 | - |
| exon-intron | SLC7A4 | 22 | + | P2RX6P | 22 | + |
| exon-exon | PYGB | 20 | + | ACAA1 | 3 | - |
| exon-exon | SNORD3A | 17 | + | AGAP3 | 7 | + |
| exon-intron | ITPR2 | 12 | - | GAREM1 | 18 | - |
| exon-exon | CAMLG | 5 | + | CPLANE1 | 5 | - |
| intron-exon | SELENOW | 19 | + | RBM14 | 11 | + |
| exon-exon | POT1-AS1 | 7 | + | LINC02830 | 7 | + |
| exon-intron | SYS1-DBNDD2 | 20 | + | DPP6 | 7 | + |
| exon-exon | PARD6A | 16 | + | RNA45SN2 | 21 | + |
| exon-exon | SAFB2 | 19 | - | TINCR | 19 | - |
| exon-exon | MAP4 | 3 | - | EEF1A1P5 | 9 | + |
| exon-exon | LINC00345 | 13 | + | HNRNPA1L2 | 13 | + |
| exon-exon | CYP4V2 | 4 | + | KLKB1 | 4 | + |
| intron-exon | CA9 | 9 | - | ARHGEF39 | 9 | - |
| exon-exon | RNA45SN3 | 21 | + | CIRBP | 19 | + |
| exon-exon | OLFM3 | 1 | - | RIMS1 | 6 | + |
| intron-exon | CCNT2-AS1 | 2 | - | TMEM163 | 2 | - |
| exon-exon | ZNF566 | 19 | - | NFIA | 1 | + |
| exon-exon | KCNJ10 | 1 | - | DCTN1 | 2 | - |
| intron-exon | PIK3R3 | 1 | + | TSPAN1 | 1 | + |
| exon-exon | NAP1L5 | 4 | - | STRAP | 12 | + |
| exon-exon | POLN | 4 | - | C1orf159 | 1 | - |
| exon-exon | SVIL-AS1 | 10 | + | GDI2 | 10 | - |
| exon-intron | MRFAP1 | 4 | + | RNA28SP | 21 | + |
| exon-intron | FAM131C | 1 | - | LOC440568 | 1 | - |
| intron-exon | SHC4 | 15 | + | EID1 | 15 | + |
| exon-exon | SUMO1 | 2 | - | CDR1 | X | + |
| exon-exon | ZNF550 | 19 | - | ZNF549 | 19 | - |
| intron-exon | LOC100129917 | 4 | - | LOC107986211 | 4 | - |
| exon-exon | RNA45SN1 | 21 | + | AMPD2 | 1 | + |
| exon-exon | CA8 | 8 | - | CORO2B | 15 | + |
| intron-exon | TTLL5 | 14 | - | ERG28 | 14 | - |
| exon-exon | MOG | 6 | + | TTYH2 | 17 | + |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| exon-exon | RNA45SN1 | 21 | + | ATP6V0E2 | 7 | + |
| exon-exon | MALAT1 | 11 | + | TUBB4A | 19 | - |
| intron-exon | LOC105369350 | 11 | + | TSGA10IP | 11 | + |
| exon-exon | FUT9 | 6 | + | LEMD2 | 6 | - |
| intron-exon | AC009949.1 | 2 | + | SP100 | 2 | + |
| exon-exon | ZNF251 | 8 | - | CTSF | 11 | - |
| intron-exon | CDYL2 | 16 | - | PSMB1 | 6 | - |
| intron-exon | RBMX | X | - | BRF2 | 8 | - |
| exon-exon | TUBA1B | 12 | - | PFKM | 12 | + |
| exon-exon | RNA45SN2 | 21 | + | STAT1 | 2 | - |
| exon-exon | ZNF670-ZNF695 | 1 | - | SCCPDH | 1 | + |
| exon-intron | LINC02473 | 4 | + | SOD3 | 4 | + |
| exon-exon | PSMB1 | 6 | - | LOC105378157 | 6 | - |
| exon-exon | GAD1 | 2 | + | ALDOC | 17 | - |
| intron-exon | TMC7 | 16 | + | PARK7 | 1 | + |
| exon-intron | EEF1A1P5 | 9 | + | UBAC2 | 13 | + |
| exon-exon | SNHG29 | 17 | + | APEX1 | 14 | + |
| exon-exon | GPR75-ASB3 | 2 | - | ASB3 | 2 | - |
| exon-exon | SLC8A2 | 19 | - | DHX34 | 19 | + |
| exon-intron | CPE | 4 | + | GDI1 | X | + |
| exon-exon | KDM4C | 9 | + | MEIS1 | 2 | + |
| intron-exon | MTRNR2L12 | 3 | - | RPL15 | 3 | + |
| exon-exon | ZNF418 | 19 | - | PRKCZ | 1 | + |
| exon-intron | LOC100419920 | 2 | + | OR7E102P | 2 | + |
| exon-exon | LIMA1 | 12 | - | ANKRD40 | 17 | - |
| exon-exon | POLR2A | 17 | + | TUBA1B | 12 | - |
| intron-exon | SLC16A2 | X | + | ZNF16 | 8 | - |
| exon-exon | RNA45SN3 | 21 | + | MAP1LC3B | 16 | + |
| intron-exon | PPP1CC | 12 | - | TACC1 | 8 | + |
| exon-exon | RNA45SN2 | 21 | + | ENO1 | 1 | - |
| exon-intron | RNA45SN2 | 21 | + | CRYBB2P1 | 22 | + |
| exon-exon | RNA45SN2 | 21 | + | FAM13B | 5 | - |
| exon-exon | COX1 | MT | + | MLLT11 | 1 | + |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| intron-exon | KIAA1549L | 11 | + | SELPLG | 12 | - |
| exon-exon | LOC100996318 | 1 | + | MICAL3 | 22 | - |
| intron-exon | SEC22B4P | 1 | + | GDI1 | X | + |
| exon-exon | WNK1 | 12 | + | ALDOC | 17 | - |
| exon-exon | ZNF204P | 6 | - | THEM6 | 8 | + |
| intron-exon | CEP85L | 6 | - | EEF1A1P5 | 9 | + |
| exon-exon | TCEANC | X | + | LOC107985656 | X | + |
| exon-exon | KCNA1 | 12 | + | NELL2 | 12 | - |
| intron-exon | AC124944.3 | 3 | - | TNK2 | 3 | - |
| exon-exon | CDH18 | 5 | - | PHF14 | 7 | + |
| intron-exon | UBE2E3 | 2 | + | SREBF1 | 17 | - |
| exon-intron | LINC01465 | 12 | + | AC048341.1 | 12 | + |
| exon-exon | CHL1 | 3 | + | ELAC1 | 18 | + |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| exon-exon | ALDH1L1 | 3 | - | SLC25A29 | 14 | - |
| exon-exon | ZMYND8 | 20 | - | SLC39A14 | 8 | + |
| exon-exon | RNU6-8 | 14 | - | TRIM9 | 14 | - |
| exon-exon | RNA45SN1 | 21 | + | ENO2 | 12 | + |
| exon-exon | CHAMP1 | 13 | + | ZSCAN18 | 19 | - |
| exon-intron | LPP | 3 | + | EML5 | 14 | - |
| intron-exon | ZNF671 | 19 | - | NDRG4 | 16 | + |
| intron-exon | PSMA1 | 11 | + | PKP4 | 2 | + |
| exon-intron | EOLA1 | X | - | LINC00893 | X | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | MYT1 | 20 | + | ABCA11P | 4 | - |
| exon-exon | SCN2B | 11 | - | SRPK3 | X | + |
| exon-intron | RNA45SN2 | 21 | + | NAPB | 20 | - |
| exon-exon | ZSCAN1 | 19 | - | ZBTB1 | 14 | + |
| exon-exon | RFX3 | 9 | - | PTCH1 | 9 | - |
| exon-exon | RGP1 | 9 | - | GBA2 | 9 | - |
| intron-exon | AC116353.5 | 5 | - | SLC35A4 | 5 | - |
| intron-exon | AUTS2 | 7 | + | TRIM3 | 11 | - |
| intron-exon | KCND2 | 7 | + | SYT1 | 12 | + |
| exon-exon | PHC3 | 3 | - | NOVA1 | 14 | - |
| exon-exon | RUNX1T1 | 8 | - | TRIQK | 8 | - |
| exon-intron | TOMM5 | 9 | - | FBXO10 | 9 | - |
| exon-exon | LMCD1-AS1 | 3 | - | LOC101927394 | 3 | - |
| intron-exon | CCDC102B | 18 | + | CNOT1 | 16 | - |
| intron-exon | STAMBPL1 | 10 | + | LOC105379869 | 10 | + |
| exon-intron | GAPDH | 12 | - | CCDC93 | 2 | + |
| intron-exon | LOC105370449 | 14 | - | DNMT1 | 19 | - |
| exon-exon | CTNNBIP1 | 1 | - | CLSTN1 | 1 | - |
| intron-exon | RBM14 | 11 | + | RBM4 | 11 | + |
| exon-exon | RNA45SN2 | 21 | + | SLC30A9 | 4 | + |
| exon-exon | RPRD1A | 18 | - | WDR7 | 18 | + |
| exon-exon | GPM6A | 4 | - | POLR2A | 17 | + |
| intron-exon | RALGDS | 9 | - | MAMLD1 | X | + |
| exon-exon | SURF2 | 9 | + | STKLD1 | 9 | + |
| exon-exon | SYT7 | 11 | + | WIPF2 | 17 | + |
| exon-intron | SUGT1P1 | 9 | - | LOC107987061 | 9 | - |
| exon-intron | SMG1P5 | 16 | - | NPIPB12 | 16 | - |
| intron-exon | RNU6-9 | 19 | + | MCM3AP | 21 | - |
| exon-exon | LINC00242 | 6 | + | LINC00574 | 6 | + |
| intron-exon | RNR1 | MT | + | RACK1 | 5 | - |
| exon-intron | RETREG2 | 2 | + | RUNX1T1 | 8 | - |
| intron-exon | ZNF608 | 5 | - | PMPCB | 7 | + |
| exon-exon | SLC1A3 | 5 | + | DCLRE1A | 10 | - |
| exon-exon | LINC00537 | 9 | + | LOC105379251 | 9 | + |
| intron-exon | DPP6 | 7 | + | PLAGL2 | 20 | - |
| exon-exon | PPIL3 | 2 | - | RPH3A | 12 | + |
| exon-exon | RNA45SN1 | 21 | + | POMT1 | 9 | + |
| exon-exon | SMIM11B | 21 | + | TIAM1 | 21 | - |
| intron-exon | SOX2-OT | 3 | + | SLMAP | 3 | + |
| exon-intron | LOC101930100 | 21 | + | AC084198.2 | 3 | + |
| intron-exon | RNU6-6P | 10 | + | CNKSR2 | X | + |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| exon-intron | MAST1 | 19 | + | ASIC2 | 17 | - |
| exon-exon | FUBP1 | 1 | - | GPM6A | 4 | - |
| intron-exon | LOC112694768 | 22 | - | TOP3B | 22 | - |
| exon-intron | LOC112267972 | 6 | - | AL356534.1 | 6 | - |
| intron-exon | RNR2 | MT | + | SUV39H2 | 10 | + |
| exon-intron | LOC100128340 | 5 | + | AC106795.3 | 5 | + |
| exon-exon | LRRC23 | 12 | + | CAMKK2 | 12 | - |
| intron-exon | LOC101926913 | 2 | + | GAD1 | 2 | + |
| exon-exon | USF1 | 1 | - | MLLT6 | 17 | + |
| exon-exon | LAMA5 | 20 | - | ADRM1 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| exon-exon | RNA45SN3 | 21 | + | TMBIM6 | 12 | + |
| exon-intron | LOC101929963 | 2 | - | LINC01117 | 2 | - |
| exon-exon | NEK10 | 3 | - | DCUN1D4 | 4 | + |
| intron-exon | AC008543.1 | 19 | + | ZNF887P | 19 | + |
| exon-exon | PKIB | 6 | + | LOC112267966 | 6 | + |
| intron-exon | LOC112543475 | 19 | - | PAPOLA | 14 | + |
| intron-exon | LAMTOR4 | 7 | + | SH3D19 | 4 | - |
| exon-exon | ND3 | MT | + | PRAF2 | X | - |
| exon-exon | MPHOSPH8 | 13 | + | UBL3 | 13 | - |
| exon-exon | VPS13C | 15 | - | RAPGEF1 | 9 | - |
| exon-exon | FGF12 | 3 | - | OPA1 | 3 | + |
| exon-intron | RNVU1-18 | 1 | - | GABRA6 | 5 | + |
| exon-exon | NAGLU | 17 | + | COASY | 17 | + |
| exon-exon | ARHGAP26 | 5 | + | FGF1 | 5 | - |
| exon-exon | TUBA1B | 12 | - | GRM4 | 6 | - |
| intron-exon | ABCA8 | 17 | + | ABCA9-AS1 | 17 | + |
| intron-exon | RNU6-6P | 10 | + | PALM2AKAP2 | 9 | + |
| exon-intron | GLIDR | 9 | - | CNTNAP3P6 | 9 | - |
| exon-intron | TAFA5 | 22 | - | KLC1 | 14 | - |
| exon-exon | CASTOR3 | 7 | - | GTF2F1 | 19 | - |
| exon-exon | CCSER2 | 10 | + | R3HCC1L | 10 | + |
| exon-exon | HNRNPDL | 4 | + | ENOPH1 | 4 | + |
| exon-exon | SNORD3A | 17 | + | TUBA1A | 12 | - |
| intron-exon | AC008571.2 | 5 | + | MBP | 18 | - |
| intron-exon | ARHGAP15 | 2 | - | BBS2 | 16 | - |
| intron-exon | CCDC200 | 17 | - | RPA2 | 1 | - |
| exon-exon | RNU6-3P | X | - | INTS11 | 1 | - |
| exon-exon | GUK1 | 1 | + | ARF1 | 1 | + |
| intron-exon | FEZ2 | 2 | - | MBP | 18 | - |
| intron-exon | CCDC18 | 1 | + | MBP | 18 | - |
| exon-exon | TRE-CTC1-6 | 6 | + | IGBP1 | X | + |
| exon-exon | FRMPD4 | X | + | KCNMA1 | 10 | - |
| exon-exon | RNU2-1 | 17 | - | CNTN2 | 1 | + |
| intron-exon | RNR2 | MT | + | ND4 | MT | + |
| exon-exon | RNU12 | 22 | + | RNPS1 | 16 | - |
| intron-exon | CCDC200 | 17 | - | TSC1 | 9 | - |
| exon-exon | ZMYM2 | 13 | + | RAB1A | 2 | - |
| exon-intron | SNX1 | 15 | + | HNRNPC | 14 | - |
| exon-exon | RNU1-2 | 1 | + | PON2 | 7 | - |
| exon-intron | LINC02821 | 12 | + | PRANCR | 12 | + |
| exon-exon | RNA45SN1 | 21 | + | ATF4 | 22 | + |
| exon-exon | HPCAL4 | 1 | - | UBC | 12 | - |
| exon-exon | ADD3-AS1 | 10 | - | XPNPEP1 | 10 | - |
| intron-exon | MARCHF7 | 2 | + | ERMARD | 6 | + |
| intron-exon | CCDC200 | 17 | - | RTN4 | 2 | - |
| exon-exon | RNU6-9 | 19 | + | ITFG1 | 16 | - |
| intron-exon | PSMG4 | 6 | - | TUBB2B | 6 | - |
| exon-intron | RNA28SN3 | 21 | + | ZNF710-AS1 | 15 | - |
| exon-exon | ZNF586 | 19 | + | PARN | 16 | - |
| exon-intron | GPR63 | 6 | - | LOC105377908 | 6 | - |
| exon-exon | ZNF800 | 7 | - | UBA2 | 19 | + |
| exon-intron | TIMM10B | 11 | + | AC084337.2 | 11 | + |
| intron-exon | UFL1 | 6 | - | UFL1-AS1 | 6 | - |
| exon-exon | CCNI | 4 | + | CCNI | 4 | - |
| exon-exon | GABBR2 | 9 | - | AGT | 1 | - |
| exon-intron | WDR74 | 11 | - | PRKAR2B | 7 | + |
| intron-exon | AC011287.1 | 7 | + | LOC107986770 | 7 | + |
| intron-exon | SLC2A14 | 12 | + | GDI2 | 10 | - |
| exon-intron | APP | 21 | + | AP000229.1 | 21 | + |
| exon-exon | MINDY1 | 1 | - | ANXA9 | 1 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-exon | SIRT4 | 12 | - | PPP2CA | 5 | - |
| intron-exon | SEC22B4P | 1 | + | SNAP25 | 20 | + |
| exon-exon | NDUFA4 | 7 | - | RTN3 | 11 | + |
| exon-exon | TMEM107 | 17 | - | CHN1 | 2 | - |
| exon-exon | COX7C | 5 | + | CALM3 | 19 | + |
| exon-exon | ATP5F1A | 18 | - | NEFL | 8 | - |
| exon-exon | GOT2 | 16 | + | LOC107984867 | 16 | + |
| exon-exon | SIRT4 | 12 | - | SPARCL1 | 4 | - |
| exon-exon | LINC01414 | 8 | - | LOC105375876 | 8 | - |
| exon-exon | RNA45SN1 | 21 | + | NEFL | 8 | - |
| exon-exon | SGCE | 7 | - | SCAPER | 15 | - |
| exon-exon | LOC107984251 | 10 | - | LIPA | 10 | - |
| intron-exon | LRRC37A2 | 17 | + | LRRC37A17P | 17 | + |
| exon-exon | RNU5A-1 | 15 | + | TARDBP | 1 | + |
| exon-exon | RNVU1-7 | 1 | - | RAN | 12 | + |
| intron-exon | LOC105370249 | 13 | - | LOC105370248 | 13 | - |
| exon-exon | ZFR | 5 | - | PRKAR1B | 7 | - |
| exon-exon | ARL15 | 5 | - | ASCC3 | 6 | - |
| exon-exon | SIRT4 | 12 | - | EWSR1 | 22 | + |
| exon-intron | LYPD8 | 1 | - | CR589904.2 | 1 | - |
| exon-exon | WDR74 | 11 | - | SRGAP2 | 1 | + |
| exon-exon | ASMTL | Y | - | NSF | 17 | + |
| intron-exon | RNA28SP | 21 | + | SNAP25 | 20 | + |
| exon-exon | RNA45SN3 | 21 | + | NDRG2 | 14 | - |
| exon-exon | RNA45SN3 | 21 | + | DUSP6 | 12 | - |
| intron-exon | SEC22B4P | 1 | + | YWHAB | 20 | + |
| exon-exon | LINC01106 | 2 | - | ATRNL1 | 10 | + |
| intron-exon | SOX2-OT | 3 | + | DMPK | 19 | - |
| exon-exon | C21orf62-AS1 | 21 | + | LOC105377136 | 21 | + |
| intron-exon | AC005562.1 | 17 | + | LOC105371723 | 17 | + |
| intron-exon | OSMR-AS1 | 5 | + | LOC107986414 | 5 | + |
| intron-exon | LINC00508 | 12 | + | LINC00507 | 12 | + |
| intron-exon | SEC22B4P | 1 | + | PPP2R1A | 19 | + |
| intron-exon | AC018637.1 | 7 | - | PDE1C | 7 | - |
| exon-intron | LOC107986824 | 7 | + | AC002451.1 | 7 | + |
| intron-exon | RNR2 | MT | + | GRN | 17 | + |
| exon-exon | RNA45SN2 | 21 | + | CYB561 | 17 | - |
| intron-exon | CUL2 | 10 | + | SCAPER | 15 | - |
| intron-exon | TAF1D | 11 | - | XIST | X | - |
| exon-exon | LOC105378419 | 10 | - | LIPA | 10 | - |
| intron-exon | LINC02144 | 5 | - | MAPK10 | 4 | - |
| intron-exon | LOC100419238 | X | - | LOC105373204 | X | - |
| exon-exon | DTD2 | 14 | - | HECTD1 | 14 | - |
| exon-exon | RNVU1-7 | 1 | - | ELMO1 | 7 | - |
| exon-exon | RNVU1-7 | 1 | - | SRCAP | 16 | + |
| exon-exon | MYO1E | 15 | + | FAM81A | 15 | + |
| exon-exon | LOC107987000 | 9 | + | LOC107987008 | 9 | + |
| intron-exon | TRY-GTA2-1 | 2 | + | PMPCB | 7 | + |
| intron-exon | RNR2 | MT | + | CAMK4 | 5 | + |
| exon-exon | LOC112268203 | 17 | - | HEXIM1 | 17 | - |
| exon-exon | CLDN11 | 3 | + | TSTD2 | 9 | - |
| intron-exon | NF1 | 17 | - | SUPT6H | 17 | + |
| intron-exon | FRMD4B | 3 | - | NUP88 | 17 | - |
| intron-exon | AC087386.1 | 15 | - | LOC105379203 | 15 | - |
| intron-exon | NMT2 | 10 | - | LOC105376431 | 10 | - |
| exon-exon | LINC00476 | 9 | - | PIK3IP1 | 22 | - |
| exon-exon | UQCRH | 1 | + | WASF1 | 6 | - |
| exon-exon | UMAD1 | 7 | + | ME3 | 11 | - |
| exon-exon | HRAT92 | 7 | + | PRKAR1B | 7 | - |
| intron-exon | LOC107985736 | 1 | - | BGN | X | + |
| exon-exon | IMPDH1P7 | 2 | + | LOC105373786 | 2 | + |
| exon-exon | SLC36A1 | 5 | + | RIPOR2 | 6 | - |
| exon-exon | RNA45SN3 | 21 | + | SDHA | 5 | + |
| exon-exon | RNA45SN1 | 21 | + | PEA15 | 1 | + |
| exon-exon | RNA45SN1 | 21 | + | RFC5 | 12 | + |
| exon-exon | RGPD6 | 2 | - | MBP | 18 | - |
| exon-exon | RNU1-1 | 1 | - | TMEM198B | 12 | + |
| exon-exon | GAS5 | 1 | - | CENPL | 1 | - |
| intron-exon | AL121906.1 | 20 | - | NECAB3 | 20 | - |
| exon-intron | LOC103908605 | 9 | - | CNTNAP3P8 | 9 | - |
| exon-exon | PLP1 | X | + | GNPAT | 1 | + |
| intron-exon | DNAI1 | 9 | - | FAM219A | 9 | - |
| intron-exon | RNA5-8SP10 | 21 | + | SEPTIN2 | 2 | + |
| intron-exon | DUSP8 | 11 | + | KRTAP5-AS1 | 11 | + |
| intron-exon | IGH | 14 | - | IGHG4 | 14 | - |
| exon-intron | OIP5-AS1 | 15 | + | S100PBP | 1 | + |
| exon-exon | LOC105372473 | 19 | + | ZIM2-AS1 | 19 | + |
| exon-intron | SLC7A5P2 | 16 | - | SMG1P3 | 16 | - |
| exon-exon | SEC24C | 10 | - | BMS1P4-AGAP5 | 10 | - |
| exon-exon | RNU6-3P | X | - | CHRD | 3 | + |
| intron-exon | LINC02458 | 12 | - | ZADH2 | 18 | - |
| intron-exon | SLC39A11 | 17 | - | GALNT17 | 7 | + |
| intron-exon | RNA5-8SP10 | 21 | + | CD34 | 1 | - |
| intron-exon | SOX2-OT | 3 | + | LRRC4C | 11 | - |
| exon-exon | TMSB4X | X | + | MEF2C | 5 | - |
| exon-exon | MAP7D2 | X | - | SDC3 | 1 | - |
| exon-intron | LOC105378850 | 1 | - | LOC107985088 | 1 | - |
| intron-exon | ENPP2 | 8 | - | RAB3IP | 12 | + |
| exon-exon | RNU1-4 | 1 | + | PRNP | 20 | + |
| exon-exon | LOC105374240 | 3 | - | LOC101928882 | 3 | - |
| exon-exon | MRPL18 | 6 | + | CERCAM | 9 | + |
| intron-exon | WDR43 | 2 | + | MBP | 18 | - |
| intron-exon | NPHP4 | 1 | - | MTFR1L | 1 | + |
| intron-exon | RNR2 | MT | + | CD59 | 11 | - |
| exon-intron | EGR3 | 8 | + | PEBP4 | 8 | + |
| intron-exon | CT45A10 | X | + | SAGE1 | X | + |
| intron-exon | C2orf76 | 2 | - | LOC105373581 | 2 | - |
| exon-exon | LOC105369201 | 15 | + | ALDH1A3 | 15 | + |
| exon-exon | RNU5B-1 | 15 | + | COPZ2 | 17 | - |
| exon-exon | APOC1 | 19 | + | LAMA1 | 18 | - |
| exon-exon | SIRT4 | 12 | - | JPH4 | 14 | - |
| exon-exon | RNA45SN2 | 21 | + | PHAX | 5 | + |
| exon-exon | RNU1-1 | 1 | - | RPL37A | 2 | + |
| intron-exon | CTC1 | 17 | - | CORO6 | 17 | - |
| exon-intron | OR1J2 | 9 | + | OR1B1 | 9 | + |
| exon-exon | ACTB | 7 | - | CBX5 | 12 | - |
| exon-intron | LOC101928387 | 12 | + | AEBP2 | 12 | + |
| exon-exon | LOC101926887 | 10 | - | LIPA | 10 | - |
| intron-exon | NQO2-AS1 | 6 | + | NQO2 | 6 | + |
| exon-exon | ZNF559 | 19 | + | ZNF177 | 19 | + |
| intron-exon | AP003108.1 | 11 | + | LOC105369329 | 11 | + |
| exon-intron | RNU6-2 | 19 | + | MYRF | 11 | + |
| intron-exon | LOC107832851 | 10 | + | SIRT1 | 10 | + |
| exon-intron | GLIDR | 9 | - | CNTNAP3P6 | 9 | - |
| intron-exon | LRRC39 | 1 | + | DBT | 1 | + |
| exon-exon | RNU1-4 | 1 | + | SLC38A2 | 12 | - |
| exon-exon | LOC105374690 | 2 | + | CCDC85A | 2 | + |
| exon-exon | CAPRIN1 | 11 | + | NAT10 | 11 | + |
| intron-exon | RNU1-27P | 14 | + | GAD1 | 2 | + |
| exon-exon | SSH2 | 17 | - | NPIPB12 | 16 | - |
| exon-exon | RNU1-2 | 1 | + | SERTM1 | 13 | + |
| exon-intron | PRICKLE2 | 3 | - | CADPS | 3 | - |
| exon-exon | LOC107986298 | 4 | - | NEGR1 | 1 | - |
| intron-exon | RNR1 | MT | + | RTN4 | 2 | - |
| intron-exon | CLDN12 | 7 | + | LOC102723899 | 7 | + |
| exon-intron | LINC00856 | 10 | + | LOC110121470 | 10 | + |
| exon-exon | RNU5A-1 | 15 | + | CIRBP | 19 | + |
| exon-exon | RNA45SN3 | 21 | + | SDC3 | 1 | - |
| exon-exon | IRS2 | 13 | + | LOC105370360 | 13 | + |
| exon-exon | LOC105378375 | 10 | + | LINC00856 | 10 | + |
| intron-exon | FLJ31356 | 2 | + | FOSL2 | 2 | + |
| intron-exon | RNR1 | MT | + | UGP2 | 2 | + |
| exon-exon | MRPL42 | 12 | + | MKRN2 | 3 | + |
| exon-exon | MBP | 18 | - | OSBPL1A | 18 | - |
| exon-exon | GGPS1 | 1 | + | TBCE | 1 | + |
| exon-exon | RNA45SN3 | 21 | + | RELA | 11 | - |
| exon-exon | RNA45SN2 | 21 | + | H2BC21 | 1 | - |
| exon-exon | LOC107984567 | 13 | + | DLEU7-AS1 | 13 | + |
| exon-exon | RNA45SN1 | 21 | + | MAP1LC3B | 16 | + |
| intron-exon | SFXN3 | 10 | - | PDZD7 | 10 | - |
| exon-exon | RNA45SN2 | 21 | + | MBP | 18 | - |
| intron-exon | TXLNB | 6 | + | LOC107986651 | 6 | + |
| exon-exon | XKR7 | 20 | - | PDRG1 | 20 | - |
| exon-exon | RNF19A | 8 | - | STAU2 | 8 | - |
| exon-exon | ANKS1B | 12 | - | ANO4 | 12 | + |
| exon-exon | PXMP4 | 20 | - | NECAB3 | 20 | - |
| exon-exon | LOC101928037 | 8 | + | PTP4A3 | 8 | + |
| exon-exon | RPSA | 3 | + | MOBP | 3 | + |
| intron-exon | ALKBH7 | 19 | + | NEFM | 8 | + |
| exon-intron | RNU6ATAC | 9 | - | RRP12 | 10 | - |
| exon-exon | COL19A1 | 6 | - | LMBRD1 | 6 | - |
| exon-exon | LOC101927234 | 9 | - | ZFAND5 | 9 | - |
| exon-exon | FGF1 | 5 | - | VPS35L | 16 | + |
| exon-exon | RNU6-2 | 19 | + | PARGP1-AGAP4 | 10 | - |
| intron-exon | ZNF184 | 6 | - | ZNF204P | 6 | - |
| intron-exon | RNR2 | MT | + | MBP | 18 | - |
| exon-exon | AHCY | 20 | - | SRRM2 | 16 | + |
| intron-exon | WDR47 | 1 | + | SARS1 | 1 | + |
| exon-exon | THAP6 | 4 | + | PCDH9 | 13 | - |
| exon-intron | FKRP | 19 | + | SLC1A5 | 19 | + |
| exon-exon | LOC101926887 | 10 | - | LIPA | 10 | - |
| exon-exon | GPM6A | 4 | - | BRWD1 | 21 | - |
| exon-exon | LYPD8 | 1 | - | LOC105373277 | 1 | - |
| exon-exon | H2AC21 | 1 | - | H2BC21 | 1 | - |
| exon-exon | LOC105376159 | 9 | - | LINC00092 | 9 | - |
| exon-exon | BSG | 19 | + | SLC1A3 | 5 | + |
| exon-exon | NUTM2A-AS1 | 10 | - | DIXDC1 | 11 | + |
| exon-exon | RNA45SN3 | 21 | + | GRB2 | 17 | - |
| exon-exon | RBM8A | 1 | - | SOS1 | 2 | - |
| exon-intron | LOC107985839 | 2 | - | AC018685.2 | 2 | - |
| exon-exon | RNA45SN3 | 21 | + | PCGF3 | 4 | + |
| exon-exon | FAM136A | 2 | - | ATP2B4 | 1 | + |
| exon-exon | CCK | 3 | - | EXOC6B | 2 | - |
| exon-exon | RPL13AP5 | 10 | + | CDK19 | 6 | - |
| exon-exon | MIR100HG | 11 | - | UPF2 | 10 | - |
| intron-exon | HPCAL1 | 2 | - | SEMA6D | 15 | + |
| exon-exon | RNU6-9 | 19 | + | BRWD1 | 21 | - |
| intron-exon | FKBP9 | 7 | + | MBTPS2 | X | + |
| exon-intron | LOC102725227 | 18 | + | AQP4-AS1 | 18 | + |
| exon-exon | TMEM246-AS1 | 9 | + | RNF20 | 9 | + |
| exon-exon | MMP16 | 8 | + | LOC105375630 | 8 | + |
| exon-exon | CTNNB1 | 3 | + | FAR1 | 11 | + |
| exon-exon | LOC105371689 | 1 | + | SOX13 | 1 | + |
| intron-exon | LOC101929937 | 20 | - | NRSN2-AS1 | 20 | - |
| exon-exon | TRAPPC2 | X | - | RIC1 | 9 | + |
| exon-intron | LOC105374392 | 4 | + | LOC101928622 | 4 | + |
| intron-exon | LOC107986991 | 9 | - | FGF7P3 | 9 | - |
| exon-exon | RNU6-9 | 19 | + | HNRNPDL | 4 | - |
| exon-intron | ZNF211 | 19 | + | EPHB1 | 3 | + |
| exon-exon | OTOA | 16 | + | LOC112268174 | 16 | + |
| exon-exon | CDC25B | 20 | + | CRY2 | 11 | + |
| exon-exon | VPS50 | 7 | + | GLS | 2 | + |
| exon-exon | L2HGDH | 14 | - | FIP1L1 | 4 | + |
| exon-exon | CELF2 | 10 | + | DGKB | 7 | - |
| exon-exon | ASAP2 | 2 | + | USP11 | X | + |
| exon-exon | SERINC1 | 6 | - | SLC39A10 | 2 | + |
| exon-exon | ATXN1 | 6 | - | GAPVD1 | 9 | + |
| exon-exon | PPM1K-DT | 4 | + | HERC6 | 4 | + |
| exon-exon | LINC00537 | 9 | + | PPP6R2 | 22 | + |
| exon-exon | SLC25A44 | 1 | + | PRKACB | 1 | + |
| exon-intron | LINC01184 | 5 | - | CCDC192 | 5 | - |
| exon-exon | POLR2J3 | 7 | - | ESYT2 | 7 | - |
| exon-exon | SIKE1 | 1 | - | CSDE1 | 1 | - |
| exon-intron | RNA45SN1 | 21 | + | PPP1R16B | 20 | + |
| exon-exon | TMX2-CTNND1 | 11 | + | PICALM | 11 | - |
| exon-exon | SCN2A | 2 | - | KDM2B | 12 | - |
| intron-exon | NANOGP1 | 12 | - | SLC2A14 | 12 | - |
| exon-exon | ROCK2 | 2 | - | NIPAL2 | 8 | - |
| exon-intron | RPL31 | 2 | + | DNM1L | 12 | + |
| exon-exon | RNA45SN1 | 21 | + | PLP1 | X | + |
| exon-exon | PRNP | 20 | + | SLC20A1 | 2 | + |
| intron-exon | CHRFAM7A | 15 | - | ADCY2 | 5 | + |
| intron-exon | TPTE2P1 | 13 | - | CENPJ | 13 | - |
| exon-intron | LOC107985808 | 2 | + | AC012593.1 | 2 | + |
| exon-exon | RNA45SN1 | 21 | + | CHP1 | 15 | + |
| intron-exon | AL353748.3 | 9 | + | SPIN1 | 9 | + |
| exon-intron | LOC105370404 | 14 | - | OR6E1P | 14 | - |
| exon-exon | POLR2I | 19 | - | LAMP2 | X | - |
| intron-exon | RNR2 | MT | + | LRIG1 | 3 | - |
| exon-exon | ZNF562 | 19 | - | ZNF561 | 19 | - |
| intron-exon | AL353748.3 | 9 | + | SPIN1 | 9 | + |
| exon-exon | LOC107985400 | 20 | + | LOC105372582 | 20 | + |
| intron-exon | AC008667.1 | 5 | + | PSD2 | 5 | + |
| exon-exon | SETD2 | 3 | - | NASP | 1 | + |
| exon-intron | APIP | 11 | - | LOC102723568 | 11 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| exon-intron | LOC107985688 | X | - | NLGN3 | X | - |
| intron-exon | ATXN7L1 | 7 | - | LOC100132062 | 5 | + |
| exon-intron | DDX50 | 10 | + | DDX21 | 10 | + |
| exon-intron | NPIPA2 | 16 | - | LOC105371095 | 16 | - |
| exon-exon | RBP5 | 12 | + | CLSTN3 | 12 | + |
| exon-intron | PLP1 | X | + | LOC100133091 | 7 | + |
| exon-intron | SPARCL1 | 4 | - | NIPSNAP2 | 7 | + |
| exon-intron | ARHGAP32 | 11 | - | EPB41L2 | 6 | - |
| exon-exon | CGNL1 | 15 | + | GPR173 | X | + |
| exon-exon | TBCB | 19 | + | B3GALNT1 | 3 | - |
| exon-exon | SERP1 | 3 | - | EIF2A | 3 | - |
| exon-intron | LOC107987323 | 22 | + | CR381670.1 | 21 | - |
| exon-exon | LOC105373467 | 1 | + | SNAP91 | 6 | - |
| exon-exon | ZNF736 | 7 | + | LOC105375321 | 7 | + |
| exon-exon | PRR18 | 6 | + | LOC107986669 | 6 | + |
| exon-intron | IKZF5 | 10 | - | PSTK | 10 | - |
| exon-intron | NRGN | 11 | + | TOM1 | 22 | + |
| exon-exon | LOC100996740 | 1 | - | LINC01145 | 1 | - |
| exon-exon | MAPRE2 | 18 | + | GAB1 | 4 | + |
| intron-exon | C1RL | 12 | + | C1RL-AS1 | 12 | + |
| exon-exon | RNA45SN3 | 21 | + | MRPS14 | 1 | - |
| exon-exon | SNAP25 | 20 | + | MIGA2 | 9 | + |
| exon-exon | RNA45SN1 | 21 | + | TWNK | 10 | + |
| exon-exon | PCDH10 | 4 | + | SLC11A2 | 12 | - |
| exon-intron | TESPA1 | 12 | - | FAM13B | 5 | - |
| exon-exon | GABPA | 21 | + | APP | 21 | - |
| exon-intron | RPSAP58 | 19 | + | TMEM131 | 2 | - |
| exon-intron | LINC00906 | 19 | + | LOC107985335 | 19 | + |
| exon-exon | ZBTB26 | 9 | - | ZBTB6 | 9 | - |
| exon-intron | RNU2-1 | 17 | - | MIR100HG | 11 | - |
| intron-exon | RNR2 | MT | + | XRN2 | 20 | + |
| exon-exon | RNA45SN2 | 21 | + | WDTC1 | 1 | + |
| exon-exon | ADGRV1 | 5 | + | ATG14 | 14 | - |
| exon-exon | NOL4 | 18 | - | TOX4 | 14 | + |
| exon-exon | LINC02055 | 8 | + | LOC107986979 | 8 | + |
| intron-exon | LOC107985902 | 2 | + | CTNNA2 | 2 | + |
| intron-exon | EIPR1 | 2 | - | ADGRB3 | 6 | + |
| exon-exon | ABCF1-DT | 6 | - | GNL1 | 6 | - |
| exon-intron | OR1J2 | 9 | + | OR1B1 | 9 | + |
| exon-exon | NPM2 | 8 | + | CDC16 | 13 | + |
| intron-exon | MIR31HG | 9 | - | IFNWP2 | 9 | - |
| exon-exon | LOC107985902 | 2 | + | CTNNA2 | 2 | + |
| exon-intron | PCYT1B | X | - | PDK3 | X | - |
| exon-intron | LINC02418 | 12 | - | AC055717.2 | 12 | - |
| exon-intron | CYTB | MT | + | ACAT2 | 6 | + |
| exon-exon | ZEB1 | 10 | + | ARHGAP12 | 10 | - |
| intron-exon | FTLP16 | X | - | LOC392442 | X | - |
| exon-exon | RNA45SN1 | 21 | + | ZBTB14 | 18 | - |
| exon-intron | RBFOX1 | 16 | + | LOC110467536 | 20 | - |
| exon-exon | ZSCAN23 | 6 | - | SV2B | 15 | + |
| intron-exon | SNHG14 | 15 | + | DTNA | 18 | + |
| exon-intron | ZNF772 | 19 | + | AC003005.2 | 19 | + |
| exon-exon | RNA45SN1 | 21 | + | TECPR1 | 7 | - |
| intron-exon | LINC00548 | 13 | - | LINC00598 | 13 | - |
| exon-exon | TMEM94 | 17 | + | ZFP90 | 16 | + |
| exon-intron | PCDHB14 | 5 | + | TAF7 | 5 | + |
| exon-intron | CFAP20 | 16 | - | IGSF21 | 1 | + |
| exon-exon | AP5M1 | 14 | + | MAPRE1 | 20 | + |
| exon-exon | FAM66B | 8 | - | LOC105377800 | 8 | + |
| exon-exon | LOC101926887 | 10 | - | LIPA | 10 | - |
| exon-exon | RNU1-1 | 1 | - | HNRNPA2B1 | 7 | - |
| intron-exon | RRP7BP | 22 | + | POLDIP3 | 22 | + |
| exon-exon | JMJD1C | 10 | - | ANKH | 5 | - |
| exon-exon | STX4 | 16 | + | LOC101928762 | 16 | + |
| exon-exon | LINC01715 | 1 | + | SHISA5 | 3 | - |
| exon-intron | LOC100128079 | 16 | - | KATNIP | 16 | - |
| exon-exon | LOC101926887 | 10 | - | LIPA | 10 | - |
| exon-exon | CCDC58 | 3 | - | CLIP1 | 12 | - |
| exon-exon | TANK | 2 | + | IFIH1 | 2 | - |
| intron-exon | RNU1-27P | 14 | + | SH3BGRL | X | + |
| intron-exon | DDO | 6 | - | METTL24 | 6 | - |
| intron-exon | ADD3-AS1 | 10 | + | ADD3 | 10 | + |
| exon-intron | LOC102724900 | 22 | + | AL020994.2 | 22 | + |
| exon-exon | RNU5B-1 | 15 | + | PLP1 | X | + |
| intron-exon | MAN1A1 | 6 | + | LOC105377975 | 6 | + |
| exon-intron | LOC107984035 | 9 | + | LOC105376065 | 9 | + |
| exon-exon | RNU1-1 | 1 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | COX14 | 12 | + | CERS5 | 12 | + |
| exon-exon | RNU1-2 | 1 | + | UBC | 12 | - |
| exon-exon | ZDHHC17 | 12 | + | UBC | 12 | - |
| exon-exon | VPS13C | 15 | - | MBP | 18 | - |
| exon-exon | RNA45SN3 | 21 | + | CTSK | 1 | - |
| exon-exon | SNHG1 | 11 | - | GHITM | 10 | + |
| intron-exon | LOC107984088 | 20 | - | LOC107984104 | 20 | - |
| exon-exon | PTGDS | 9 | + | PRR26 | 10 | + |
| exon-exon | RNU4-2 | 12 | - | ADGRV1 | 5 | + |
| exon-exon | CCDC167 | 6 | - | CMTR1 | 6 | - |
| exon-exon | RNU1-2 | 1 | + | MBP | 18 | - |
| exon-exon | RNU5B-1 | 15 | + | TF | 3 | + |
| intron-exon | NAP1L4 | 11 | - | MBP | 18 | - |
| intron-exon | LOC105378782 | 1 | - | WLS | 1 | - |
| exon-exon | EDRF1 | 10 | - | EDRF1-DT | 10 | - |
| exon-exon | DDX41 | 5 | - | MBP | 18 | - |
| intron-exon | LOC107985736 | 1 | - | RPL37 | 5 | - |
| intron-exon | EPB41 | 1 | + | ITM2B | 13 | + |
| intron-exon | AL391832.4 | 1 | - | LOC107985365 | 1 | - |
| exon-exon | RNA45SN2 | 21 | + | EIF2A | 3 | + |
| exon-exon | RNA45SN2 | 21 | + | GABARAPL1 | 12 | + |
| exon-exon | PLA2G12A | 4 | - | SCAPER | 15 | - |
| exon-exon | LINC00680 | 6 | - | GUSBP4 | 6 | - |
| exon-exon | UMAD1 | 7 | + | GLCCI1 | 7 | + |
| exon-exon | SLC50A1 | 1 | + | SLC1A2 | 11 | - |
| exon-exon | FAM172A | 5 | - | GSDME | 7 | - |
| intron-exon | RNU6-6P | 10 | + | YARS1 | 1 | - |
| intron-exon | ATG13 | 11 | - | HARBI1 | 11 | - |
| exon-exon | HAPLN2 | 1 | + | MBP | 18 | - |
| intron-exon | AL356534.1 | 6 | - | RSPO3 | 6 | + |
| intron-exon | ATP6V1G2-DDX39B | 6 | - | PLEKHB1 | 11 | + |
| intron-exon | LOC107985736 | 1 | - | PDE4B | 1 | + |
| exon-exon | TMTC2 | 12 | + | WLS | 1 | - |
| intron-exon | AC131237.1 | 3 | + | LOC105374027 | 3 | + |
| exon-exon | CYP17A1-AS1 | 10 | + | CYP17A1 | 10 | + |
| intron-exon | CDON | 11 | - | MBP | 18 | - |
| intron-exon | RNR2 | MT | + | EEF1A1P5 | 9 | + |
| exon-exon | ABLIM1 | 10 | - | MAPRE1 | 20 | + |
| intron-exon | CCDC200 | 17 | - | ACTB | 7 | - |
| exon-exon | ZFYVE1 | 14 | - | MBP | 18 | - |
| intron-exon | DHRS4L2 | 14 | - | DHRS4-AS1 | 14 | - |
| intron-exon | RNR2 | MT | + | ARF1 | 1 | + |
| exon-exon | LINC01877 | 2 | + | FTCDNL1 | 2 | + |
| exon-exon | LOC101927636 | 4 | + | LOC105377459 | 4 | + |
| exon-exon | LOC105378631 | 1 | + | HPCA | 1 | + |
| exon-exon | RNVU1-18 | 1 | - | TCEA1 | 8 | - |
| intron-exon | LOC102723334 | 7 | - | MCF2 | X | - |
| exon-exon | RNA45SN2 | 21 | + | PRKDC | 8 | - |
| exon-exon | DTNA | 18 | + | GABARAPL1 | 12 | + |
| exon-exon | RNU2-1 | 17 | - | GLUL | 1 | - |
| exon-exon | RNA45SN2 | 21 | + | CCT8 | 21 | - |
| exon-exon | WDR74 | 11 | - | RALGDS | 9 | - |
| intron-exon | FAM178B | 2 | - | SRP68 | 17 | - |
| intron-exon | CFAP20DC | 3 | + | CFAP20DC-AS1 | 3 | + |
| exon-exon | RNVU1-7 | 1 | - | SERP1 | 3 | - |
| exon-exon | PNKD | 2 | + | EPB41L4A-AS1 | 5 | + |
| exon-exon | ZNF366 | 5 | - | MRPS27 | 5 | - |
| intron-exon | HERC3 | 4 | - | ATP13A1 | 19 | - |
| exon-exon | LOC112268170 | 16 | + | PRRT2 | 16 | + |
| exon-exon | LOC105372984 | 1 | - | BROX | 1 | - |
| exon-exon | RNVU1-18 | 1 | - | TJAP1 | 6 | + |
| intron-exon | SNHG1 | 11 | - | SRPRA | 11 | - |
| exon-exon | RNVU1-6 | 1 | - | TXNIP | 1 | - |
| exon-exon | MTIF3 | 13 | - | SSBP1 | 7 | + |
| exon-exon | SLC35D2 | 9 | - | HSD17B3 | 9 | - |
| exon-exon | RNA45SN1 | 21 | + | SGK1 | 6 | - |
| exon-intron | ZHX1 | 8 | - | ZHX1-C8orf76 | 8 | - |
| exon-exon | LOC101926887 | 10 | - | LIPA | 10 | - |
| intron-exon | TNRC18 | 7 | + | ADAP1 | 7 | - |
| intron-exon | PDE4D | 5 | - | AGPAT4 | 6 | - |
| intron-exon | PPP4R3B | 2 | - | UBC | 12 | - |
| exon-exon | OSTM1 | 6 | - | CXCL16 | 17 | - |
| exon-exon | TRIP12 | 2 | - | ATP6V1H | 8 | - |
| exon-exon | HSPB1 | 7 | + | RAPGEF5 | 7 | - |
| exon-intron | TRIL | 7 | + | AC005013.1 | 7 | + |
| intron-exon | RPSAP59 | X | - | NXF3 | X | - |
| intron-exon | AL161893.1 | 13 | - | LINC00426 | 13 | - |
| intron-exon | SNHG1 | 11 | - | GDI1 | X | + |
| exon-exon | SMIM5 | 17 | + | IVNS1ABP | 1 | - |
| exon-exon | TMSB4X | X | + | TSPAN7 | X | + |
| exon-exon | CNTNAP2 | 7 | + | SPOCK3 | 4 | - |
| exon-exon | WDR74 | 11 | - | CHN1 | 2 | - |
| exon-exon | ARL2BP | 16 | + | PAXBP1 | 21 | - |
| exon-exon | SNORD3A | 17 | + | CCP110 | 16 | + |
| exon-exon | RNU1-1 | 1 | - | H3-3B | 17 | - |
| exon-intron | RNA45SN1 | 21 | + | MBP | 18 | - |
| intron-exon | EPS8 | 12 | - | DERA | 12 | + |
| intron-exon | LOC107986991 | 9 | - | FGF7P3 | 9 | - |
| exon-exon | TRE-CTC1-1 | 1 | + | MBP | 18 | - |
| exon-exon | NDUFS4 | 5 | + | RTN3 | 11 | + |
| exon-exon | RNU6-2 | 19 | + | LAMA5 | 20 | - |
| exon-exon | GUCY1A1 | 4 | + | GPM6A | 4 | - |
| intron-exon | OR52N2 | 11 | - | TRIM5 | 11 | - |
| intron-exon | AL589843.1 | 9 | + | GNAL | 18 | + |
| intron-exon | CCDC200 | 17 | - | CLN6 | 15 | - |
| exon-exon | RNU5A-1 | 15 | + | SNX4 | 3 | - |
| exon-exon | RNA45SN1 | 21 | + | MBP | 18 | - |
| exon-exon | PPP1R35-AS1 | 7 | + | EEF1DP2 | 9 | - |
| intron-exon | LINC00461 | 5 | - | STX1A | 7 | - |
| exon-exon | MALAT1 | 11 | + | ZKSCAN1 | 7 | + |
| intron-exon | FHIT | 3 | - | MYLK | 3 | - |
| exon-intron | ZNF252P-AS1 | 8 | + | BTBD9 | 6 | + |
| exon-intron | RUNDC3A-AS1 | 17 | + | RUNDC3A | 17 | + |
| exon-exon | WDR74 | 11 | - | SEPTIN8 | 5 | - |
| exon-exon | HDAC2-AS2 | 6 | + | LOC107986638 | 6 | + |
| intron-exon | SNHG1 | 11 | - | HESX1 | 3 | - |
| exon-exon | FTH1P10 | 5 | - | ZNF668 | 16 | - |
| exon-exon | SIRT4 | 12 | - | ADORA1 | 1 | + |
| intron-exon | VTI1B | 14 | - | ZKSCAN1 | 7 | + |
| exon-exon | TPTE2P5 | 13 | - | ERBIN | 5 | + |
| exon-exon | RNU5B-1 | 15 | + | ZFAND1 | 8 | - |
| exon-exon | PRDX5 | 11 | + | MLC1 | 22 | - |
| exon-exon | TEKT4P2 | 21 | - | GNPAT | 1 | + |
| exon-intron | SIRT4 | 12 | - | ASPA | 17 | + |
| exon-intron | RNU5A-1 | 15 | + | RABEP1 | 17 | + |
| exon-exon | CD74 | 5 | - | JMJD7-PLA2G4B | 15 | + |
| intron-exon | RNR2 | MT | + | PMP2 | 8 | - |
| intron-exon | RNR2 | MT | + | MBP | 18 | - |
| exon-exon | RNU4-2 | 12 | - | RPE | 2 | + |
| exon-exon | RNA45SN3 | 21 | + | MBP | 18 | - |
| intron-exon | RPL4 | 15 | - | TMEM140 | 7 | + |
| exon-exon | IRS4 | X | + | LOC101928358 | X | + |
| exon-exon | LOC648987 | 5 | - | SNHG14 | 15 | + |
| exon-exon | RNA45SN1 | 21 | + | RNF14 | 5 | + |
| intron-exon | CELF1 | 11 | + | PTPMT1 | 11 | + |
| exon-exon | MRPL33 | 2 | + | ZNF649 | 19 | - |
| exon-exon | RAPGEF5 | 7 | - | LUC7L2 | 7 | + |
| exon-intron | GLTP | 12 | - | GAS8 | 16 | + |
| exon-exon | JAZF1 | 7 | - | CDCA7L | 7 | - |
| exon-exon | RPS6KB1 | 17 | + | PCNX2 | 1 | - |
| exon-exon | ND4 | MT | + | TF | 3 | + |
| intron-exon | CCDC200 | 17 | - | RGS4 | 1 | + |
| intron-exon | CCDC200 | 17 | - | LAMP2 | X | - |
| exon-exon | RNA45SN1 | 21 | + | DDHD2 | 8 | + |
| exon-exon | LINC01535 | 19 | + | GFPT1 | 2 | - |
| exon-exon | RNA45SN1 | 21 | + | CCT5 | 5 | + |
| exon-exon | SIRT4 | 12 | - | UBE2L1 | 14 | + |
| exon-intron | AKR7A3 | 1 | + | AKR7A2 | 1 | + |
| exon-exon | RNA45SN1 | 21 | + | RAB6B | 3 | - |
| exon-exon | RNU5B-1 | 15 | + | CAP1 | 1 | + |
| exon-intron | PPP1R9A-AS1 | 7 | - | PPP1R9A | 7 | - |
| exon-exon | ZBTB43 | 9 | + | MVB12B | 9 | + |
| exon-exon | RNU6-5P | 2 | - | ZFYVE16 | 5 | + |
| intron-exon | MB21D2 | 3 | - | RTN3P1 | 4 | + |
| exon-exon | RNU5B-1 | 15 | + | C11orf71 | 11 | - |
| intron-exon | RNR2 | MT | + | SEC14L1 | 17 | + |
| exon-intron | CYP1B1 | 2 | + | LOC105374466 | 2 | + |
| intron-exon | RNR2 | MT | + | LIMK2 | 22 | + |
| intron-exon | LOC105370449 | 14 | - | CNPY2 | 12 | - |
| intron-exon | LIPA | 10 | - | PRELP | 1 | + |
| exon-exon | RTN4 | 2 | - | ENTPD1 | 10 | + |
| exon-exon | GSDME | 7 | - | SCRN1 | 7 | - |
| exon-exon | LOC105372902 | 1 | + | RCOR3 | 1 | + |
| exon-exon | RPL10A | 6 | + | DPP9 | 19 | - |
| intron-exon | UBTD1 | 10 | - | MMS19 | 10 | - |
| exon-exon | RNA45SN1 | 21 | + | SH3TC2 | 5 | - |
| exon-intron | DAAM2-AS1 | 6 | - | DAAM2 | 6 | - |
| exon-exon | SPAG9 | 17 | - | RHBDD1 | 2 | + |
| intron-exon | RNR1 | MT | + | CANX | 5 | + |
| exon-exon | RNU6-1 | 15 | - | VWA8 | 13 | - |
| intron-exon | SPIN1 | 9 | - | PTMA | 2 | + |
| exon-exon | RNF13 | 3 | + | LIMCH1 | 4 | + |
| exon-exon | NPHP4 | 1 | + | KCNAB2 | 1 | + |
| exon-exon | LOC107987178 | 12 | - | LINC02882 | 12 | - |
| intron-exon | RNR1 | MT | + | IPO13 | 1 | + |
| exon-exon | MAPKBP1 | 15 | + | DLGAP1 | 18 | - |
| exon-exon | FGFR1OP2 | 12 | + | MVB12B | 9 | + |
| intron-exon | CCND3 | 6 | - | CNTNAP4 | 16 | + |
| exon-exon | MYLK-AS1 | 3 | + | LOC105369194 | 3 | + |
| exon-exon | CHCHD3 | 7 | - | EXOC4 | 7 | + |
| exon-exon | FAM220A | 7 | - | CYTH3 | 7 | - |
| exon-intron | LOC105376136 | 9 | - | SHC3 | 9 | - |
| intron-exon | LOC107985736 | 1 | - | DPYD | 1 | - |
| exon-intron | TYMSOS | 18 | - | CLUL1 | 18 | - |
| exon-intron | LOC105369464 | 11 | - | AP002989.1 | 11 | - |
| exon-exon | EIF3FP3 | 2 | + | ADNP | 20 | - |
| exon-exon | C21orf62-AS1 | 21 | + | LOC105377136 | 21 | + |
| exon-intron | EID2B | 19 | + | AC011500.3 | 19 | + |
| exon-intron | RNVU1-18 | 1 | - | ABI2 | 2 | + |
| exon-exon | RNU4-1 | 12 | - | ZFYVE16 | 5 | + |
| exon-exon | LDLRAD3 | 11 | + | PRR5L | 11 | + |
| exon-exon | PPP6C | 9 | - | PPM1E | 17 | + |
| exon-intron | RNA45SN1 | 21 | + | LOC112268024 | 8 | - |
| exon-exon | ADCK5 | 8 | + | SPIRE1 | 18 | - |
| exon-exon | SIRT4 | 12 | - | MPP2 | 17 | - |
| exon-intron | LYPD8 | 1 | - | CR589904.2 | 1 | - |
| intron-exon | RNR2 | MT | + | DDX3X | X | + |
| exon-exon | MAPKBP1 | 15 | + | STX6 | 1 | - |
| exon-exon | LINC02055 | 8 | + | LOC107986979 | 8 | + |
| exon-intron | LINC01792 | 2 | - | AOX1 | 2 | - |
| exon-exon | GDPGP1 | 15 | + | STXBP1 | 9 | + |
| exon-exon | RNU1-1 | 1 | - | CLPTM1 | 19 | + |
| exon-exon | RNU1-4 | 1 | + | SCN3B | 11 | - |
| exon-exon | NDUFB8 | 10 | - | SEC31B | 10 | - |
| exon-exon | PSMC2 | 7 | + | APC | 5 | + |
| exon-exon | UBA5 | 3 | + | CBFA2T2 | 20 | - |
| exon-exon | DUBR | 3 | + | NALCN | 13 | - |
| exon-exon | RNU6-3P | X | - | PCDH9 | 13 | - |
| exon-exon | OAZ1 | 19 | + | PLP1 | X | + |
| exon-exon | NDRG1 | 8 | - | LPAR1 | 9 | - |
| exon-exon | MBP | 18 | - | PAXIP1 | 7 | - |
| intron-exon | RBM33 | 7 | - | LOC100506302 | 7 | - |
| exon-exon | COX1 | MT | + | ATP1A2 | 1 | + |
| intron-exon | CLINT1 | 5 | - | MED24 | 17 | - |
| exon-exon | SIRT4 | 12 | - | EPB41L2 | 6 | - |
| exon-intron | MRPL20 | 1 | - | MRPL20-AS1 | 1 | - |
| exon-intron | SLC7A5P2 | 16 | - | SMG1P3 | 16 | - |
| exon-exon | RNA45SN2 | 21 | + | DNAJC6 | 1 | + |
| exon-exon | RNY1 | 7 | - | EPS8 | 12 | - |
| exon-exon | RNA45SN3 | 21 | + | SLC1A3 | 5 | + |
| exon-exon | PPP1R3E | 14 | - | FBXO34 | 14 | + |
| intron-exon | FAM106A | 17 | - | USP32P2 | 17 | - |
| exon-exon | FAM114A2 | 5 | - | MRPL22 | 5 | + |
| exon-exon | RNVU1-18 | 1 | - | DENND5A | 11 | - |
| intron-exon | XPR1 | 1 | + | TYK2 | 19 | - |
| exon-exon | RNU6-2 | 19 | + | LINC-PINT | 7 | - |
| intron-exon | SMAD2 | 18 | - | EEF1A1 | 6 | - |
| exon-intron | RNU5A-1 | 15 | + | MAGEE1 | X | + |
| exon-exon | PRKAR1A | 17 | + | RIPOR3 | 20 | - |
| exon-exon | RNVU1-18 | 1 | - | CD99L2 | X | - |
| exon-exon | SIRT4 | 12 | - | SEPTIN2 | 2 | + |
| exon-exon | WDR74 | 11 | - | SUGP2 | 19 | - |
| exon-intron | ACIN1 | 14 | - | RIN3 | 14 | + |
| exon-exon | NTM | 11 | + | JAM3 | 11 | + |
| intron-exon | CRYBG1 | 6 | + | ALCAM | 3 | + |
| intron-exon | ZNF135 | 19 | - | ZNF606 | 19 | - |
| intron-exon | RPL6 | 12 | + | PTPN11 | 12 | + |
| intron-exon | LOC105370449 | 14 | - | SUPT5H | 19 | + |
| exon-exon | RNA45SN2 | 21 | + | LAMP2 | X | - |
| exon-exon | RNA45SN2 | 21 | + | AIF1L | 9 | + |
| intron-exon | LOC107987061 | 9 | - | NOL6 | 9 | - |
| exon-exon | IRAK1BP1 | 6 | + | PHIP | 6 | + |
| exon-exon | RNA45SN3 | 21 | + | NDFIP1 | 5 | + |
| exon-exon | WDR74 | 11 | - | EDRF1 | 10 | + |
| intron-exon | AC008771.1 | 5 | - | ZFYVE16 | 5 | - |
| intron-exon | MCHR1 | 22 | - | MRTFA | 22 | - |
| intron-exon | IL2RB | 22 | + | C1QTNF6 | 22 | + |
| intron-exon | AC132803.1 | 5 | + | TPP1 | 11 | - |
| intron-exon | ZFAS1 | 20 | + | TF | 3 | + |
| exon-exon | NDUFB8 | 10 | - | SEC31B | 10 | - |
| exon-intron | LAMA5 | 20 | - | ADRM1 | 20 | - |
| exon-intron | LINC01715 | 1 | + | ZNF26 | 12 | + |
| exon-exon | LOC105376313 | 9 | - | LOC105376314 | 9 | - |
| intron-exon | ATP8B4 | 15 | - | MCM3 | 6 | - |
| exon-exon | IFT81 | 12 | + | PRKAA1 | 5 | - |
| exon-exon | RNA45SN3 | 21 | + | DHCR24 | 1 | - |
| intron-exon | TSEN15 | 1 | - | COLGALT2 | 1 | - |
| exon-exon | PFN1 | 17 | - | DNM3 | 1 | + |
| intron-exon | TAF1D | 11 | - | ERMN | 2 | - |
| intron-exon | AL157834.2 | 10 | - | LOC107984257 | 10 | - |
| intron-exon | AC137630.1 | 3 | - | ARIH2 | 3 | - |
| exon-exon | RNA5S3 | 1 | - | MBP | 18 | - |
| intron-exon | RNA5-8SP10 | 21 | + | CLPTM1 | 19 | + |
| exon-exon | ZNF584 | 19 | - | MBP | 18 | - |
| intron-exon | LOC643711 | 12 | + | PTPN13 | 4 | + |
| exon-intron | LOC107985442 | 20 | - | AL135936.1 | 20 | - |
| exon-intron | APP | 21 | + | AP000229.1 | 21 | + |
| exon-exon | RNU5A-1 | 15 | + | ABHD6 | 3 | + |
| exon-exon | KIF21A | 12 | - | CADPS | 3 | - |
| exon-exon | RNA45SN3 | 21 | + | ELOVL1 | 1 | - |
| exon-exon | RNVU1-18 | 1 | - | ADAR | 1 | - |
| intron-exon | RNU2-2P | 11 | - | TRMT12 | 8 | + |
| exon-exon | LOC107985861 | 2 | - | GALNT14 | 2 | - |
| exon-exon | NNAT | 20 | + | PTPRN2 | 7 | - |
| exon-exon | TXNL4B | 16 | - | DHODH | 16 | - |
| intron-exon | LOC105370108 | 13 | + | LINC00540 | 13 | + |
| intron-exon | RNR2 | MT | + | SRSF5 | 14 | + |
| intron-exon | AL354809.1 | 13 | + | LOC105370169 | 13 | + |
| intron-exon | SLC49A4 | 3 | + | BTBD10 | 11 | - |
| intron-exon | RNR2 | MT | + | ALDH1A1 | 9 | - |
| exon-intron | RNU6-2 | 19 | + | ERGIC1 | 5 | + |
| exon-intron | KIAA1958 | 9 | + | MPZL1 | 1 | + |
| intron-exon | CDV3 | 3 | + | MBP | 18 | - |
| exon-intron | PRANCR | 12 | - | MYRFL | 12 | - |
| intron-exon | AC109439.2 | 5 | + | CTB-1I21.1 | 5 | + |
| exon-exon | ZSCAN31 | 6 | - | DUSP22 | 6 | + |
| exon-exon | MGAT1 | 5 | - | DCAF8 | 1 | - |
| intron-exon | SOX2-OT | 3 | + | GTF3A | 13 | + |
| intron-exon | CCDC200 | 17 | - | SART3 | 12 | - |
| exon-exon | APLP2 | 11 | + | NSG2 | 5 | + |
| intron-exon | CAMK2D | 4 | - | COPS7B | 2 | + |
| intron-exon | CCDC200 | 17 | - | RHOA | 3 | - |
| exon-exon | RNA45SN3 | 21 | + | ND4L | MT | + |
| exon-exon | RNA45SN1 | 21 | + | IGFBP7 | 4 | - |
| exon-exon | RNU6-3P | X | - | RBM8A | 1 | - |
| exon-exon | RNA45SN3 | 21 | + | TCTE3 | 6 | - |
| exon-exon | RNU5B-1 | 15 | + | MBP | 18 | - |
| exon-exon | ZNF684 | 1 | + | LOC105378673 | 1 | + |
| exon-exon | RNU5B-1 | 15 | + | FKBP8 | 19 | - |
| exon-intron | RNA45SN3 | 21 | + | CHCHD3 | 7 | - |
| intron-exon | HCFC2 | 12 | + | MLLT6 | 17 | + |
| exon-exon | TCEAL2 | X | + | TCEAL6 | X | + |
| exon-exon | RNU5B-1 | 15 | + | EEF1A1P5 | 9 | + |
| intron-exon | POSTN | 13 | - | NCAM1 | 11 | + |
| exon-intron | TIMM13 | 19 | - | TMPRSS9 | 19 | - |
| intron-exon | LOC112543454 | 19 | - | FARSA | 19 | - |
| intron-exon | XXYLT1 | 3 | + | NAP1L4 | 11 | - |
| exon-exon | RN7SK | 6 | + | DCTN2 | 12 | - |
| intron-exon | RNA18SP5 | 21 | + | TMEM65 | 8 | - |
| exon-intron | RNU4-1 | 12 | - | LOC101927572 | 19 | - |
| intron-exon | GYG2P1 | Y | - | ARSFP1 | Y | - |
| intron-exon | FOXL1 | 16 | + | IL11RA | 9 | + |
| intron-exon | TLE4 | 9 | + | UBC | 12 | - |
| exon-intron | ZNF630 | X | + | AC244636.3 | X | + |
| intron-exon | ERP29 | 12 | - | TMEM116 | 12 | - |
| exon-intron | RNU1-4 | 1 | + | AFF1 | 4 | + |
| intron-exon | CCDC200 | 17 | - | GNAI3 | 1 | + |
| exon-exon | RNA45SN3 | 21 | + | HSPA2 | 14 | + |
| exon-exon | POLL | 10 | + | DPCD | 10 | + |
| exon-intron | LOC105376074 | 9 | + | APBA1 | 9 | + |
| exon-exon | RNU1-1 | 1 | - | CDS2 | 20 | + |
| intron-exon | EIF2AK4 | 15 | + | PTMA | 2 | + |
| intron-exon | FAM214A | 15 | - | CCNDBP1 | 15 | + |
| exon-intron | XRCC1 | 19 | + | PINLYP | 19 | + |
| exon-exon | RNA45SN1 | 21 | + | MBP | 18 | - |
| exon-exon | COX2 | MT | + | GNAI1 | 7 | + |
| intron-exon | RNU6-9 | 19 | + | DNAAF1 | 16 | + |
| intron-exon | PHLDA3 | 1 | - | PFKM | 12 | + |
| intron-exon | SNHG14 | 15 | + | TUBA1B | 12 | - |
| exon-intron | SEC22B3P | 1 | - | SMARCA2 | 9 | + |
| exon-exon | MRPL22 | 5 | + | FAM156B | X | + |
| exon-exon | BRWD3 | X | + | LOC105373283 | X | + |
| intron-exon | SNHG14 | 15 | + | MBP | 18 | - |
| exon-exon | GIPC1 | 19 | - | ANKZF1 | 2 | + |
| exon-exon | RNA45SN3 | 21 | + | SEPTIN8 | 5 | - |
| exon-exon | SNORD3A | 17 | + | UQCRC2 | 16 | + |
| exon-exon | POLR2J3 | 7 | - | RASSF2 | 20 | - |
| exon-intron | LOC105370941 | 15 | + | GALK2 | 15 | + |
| intron-exon | SNHG29 | 17 | + | LRRC59 | 17 | - |
| exon-exon | ATXN1 | 6 | - | TBC1D12 | 10 | + |
| exon-exon | SNORD13 | 8 | + | ANXA4 | 2 | + |
| exon-exon | RNA45SN1 | 21 | + | MAP1S | 19 | + |
| exon-intron | SLITRK2 | X | - | AL109653.3 | X | - |
| exon-exon | TTC21B | 2 | - | FKBP8 | 19 | - |
| intron-exon | PSTPIP1 | 15 | + | RHBDD3 | 22 | - |
| exon-exon | RNU1-1 | 1 | - | SHISA5 | 3 | - |
| exon-exon | RNA45SN3 | 21 | + | SDHA | 5 | + |
| exon-exon | RNU1-4 | 1 | + | PEF1 | 1 | - |
| exon-exon | RNA45SN1 | 21 | + | ACTB | 7 | - |
| exon-exon | KIAA0825 | 5 | - | IFI44L | 1 | + |
| exon-intron | RRP7A | 22 | - | ZNF395 | 8 | - |
| intron-exon | AC025048.1 | 17 | - | LOC100996660 | 17 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | PLCE1 | 10 | + | NEBL | 10 | - |
| intron-exon | WDR43 | 2 | + | XRCC6 | 22 | + |
| intron-exon | CCDC200 | 17 | - | HSPA1B | 6 | + |
| intron-exon | LOC105370202 | 13 | - | LINC00462 | 13 | - |
| exon-exon | PGGT1B | 5 | - | ALDH1A1 | 9 | - |
| exon-exon | CEPT1 | 1 | + | DENND2D | 1 | + |
| exon-exon | RNU5B-1 | 15 | + | BGN | X | + |
| intron-exon | NCK2 | 2 | + | A4GALT | 22 | - |
| exon-exon | RNU5A-1 | 15 | + | CTSB | 8 | - |
| intron-exon | LOC107985736 | 1 | - | SNX11 | 17 | + |
| exon-exon | RNU12 | 22 | + | ZNF239 | 10 | - |
| intron-exon | YWHAG | 7 | - | RBM6 | 3 | + |
| exon-exon | FNDC3B | 3 | + | GORASP2 | 2 | + |
| intron-exon | FASTKD2 | 2 | + | NVL | 1 | - |
| intron-exon | LOC105369705 | 12 | - | SSPN | 12 | - |
| exon-exon | RNU12 | 22 | + | HSPA8 | 11 | - |
| intron-exon | LOC106799848 | 14 | + | ARRDC3 | 5 | - |
| intron-exon | GAS5 | 1 | - | FOSL2 | 2 | + |
| exon-intron | HNRNPH1 | 5 | - | TRAP1 | 16 | - |
| exon-exon | RNA45SN1 | 21 | + | TCTE3 | 6 | - |
| exon-intron | LINC01980 | 3 | + | LINC01967 | 3 | + |
| exon-exon | PTPRK | 6 | - | PKP2 | 12 | - |
| exon-exon | STAG3L5P | 7 | + | PILRB | 7 | + |
| exon-exon | LOC107986309 | 4 | + | LOC105377401 | 4 | + |
| exon-intron | LOC105377633 | 2 | + | XPO1 | 2 | + |
| exon-exon | CSGALNACT2 | 10 | + | ACKR3 | 2 | + |
| exon-exon | RNASE1 | 14 | - | FOXRED1 | 11 | + |
| intron-exon | GAS5 | 1 | - | RAB29 | 1 | - |
| exon-exon | PDXDC1 | 16 | + | AHCYL1 | 1 | + |
| exon-exon | LOC105375070 | 6 | + | LOC107986598 | 6 | + |
| exon-intron | EP300 | 22 | + | SPPL3 | 12 | - |
| exon-intron | S100A6 | 1 | - | BX470102.3 | 1 | - |
| exon-exon | ND2 | MT | + | TMX3 | 18 | - |
| exon-exon | SPP1 | 4 | + | WASH3P | 15 | + |
| exon-exon | RNVU1-18 | 1 | - | PIK3IP1 | 22 | - |
| exon-intron | WDR73 | 15 | - | NCAPH2 | 22 | + |
| exon-intron | OSMR-AS1 | 5 | - | H2AC6 | 6 | + |
| intron-exon | LRMDA | 10 | + | DCAF8 | 1 | - |
| exon-exon | RNU12 | 22 | + | PLP1 | X | + |
| exon-exon | RELL1 | 4 | - | LGALS8 | 1 | + |
| exon-exon | WDR74 | 11 | - | PITRM1 | 10 | - |
| exon-exon | BMPR1A | 10 | + | UBE2J1 | 6 | - |
| exon-intron | RNA45SN3 | 21 | + | MBP | 18 | - |
| exon-exon | EPAS1 | 2 | + | PLP1 | X | + |
| intron-exon | KANSL1 | 17 | - | DDX24 | 14 | - |
| exon-exon | SGMS1-AS1 | 10 | - | SGMS1 | 10 | - |
| exon-exon | ACTB | 7 | - | NEMF | 14 | - |
| intron-exon | RBFOX1 | 16 | + | SPART | 13 | - |
| intron-exon | CDR1 | X | + | AIF1L | 9 | + |
| exon-exon | LOC102724238 | 9 | - | LOC105379263 | 9 | - |
| intron-exon | KCNA2 | 1 | + | LOC107985174 | 1 | + |
| exon-exon | SYT4 | 18 | - | ATP2A2 | 12 | + |
| exon-exon | RNA45SN2 | 21 | + | PLP1 | X | + |
| exon-exon | RPSAP58 | 19 | + | ABCF3 | 3 | + |
| exon-exon | LOC105373334 | X | - | APLN | X | - |
| exon-intron | WDR74 | 11 | - | GTF3C5 | 9 | + |
| exon-intron | RN7SK | 6 | + | TCF7L2 | 10 | + |
| intron-exon | MIR31HG | 9 | - | IFNWP2 | 9 | - |
| intron-exon | MED13L | 12 | - | NAP1L3 | X | - |
| exon-exon | LOC101926887 | 10 | - | LIPA | 10 | - |
| exon-exon | STK3 | 8 | - | OXR1 | 8 | + |
| exon-intron | RNU4-1 | 12 | - | TCF12 | 15 | + |
| exon-exon | NLGN4X | X | - | DCTN4 | 5 | - |
| exon-exon | LOC107986859 | 7 | + | LOC728743 | 7 | + |
| intron-exon | RNR2 | MT | + | CDH13 | 16 | + |
| exon-exon | LOC101926887 | 10 | - | LIPA | 10 | - |
| intron-exon | MIR31HG | 9 | - | IFNWP2 | 9 | - |
| intron-exon | RNR2 | MT | + | SCG2 | 2 | - |
| exon-exon | ATP6 | MT | + | GLIDR | 9 | - |
| intron-exon | SEPTIN7-DT | 7 | + | SEPTIN7 | 7 | + |
| exon-intron | MEIS2 | 15 | - | PANTR1 | 2 | - |
| exon-exon | ME3 | 11 | + | PRSS23 | 11 | + |
| exon-exon | RNU5B-1 | 15 | + | SPARCL1 | 4 | - |
| exon-exon | WDR74 | 11 | - | TMEM25 | 11 | + |
| exon-exon | SIRT4 | 12 | - | TARDBP | 1 | + |
| intron-exon | ZNF804A | 2 | + | MICU3 | 8 | + |
| exon-exon | SNORD13 | 8 | + | STMN3 | 20 | - |
| exon-exon | RNA45SN1 | 21 | + | SLC13A4 | 7 | - |
| exon-exon | RAB30-DT | 11 | + | CAPRIN1 | 11 | + |
| intron-exon | CD226 | 18 | - | PHB | 17 | - |
| intron-exon | TAFA5 | 22 | + | ND1 | MT | + |
| exon-exon | LOC105370348 | 13 | + | LINC00443 | 13 | + |
| exon-exon | LOC105378375 | 10 | + | LINC00856 | 10 | + |
| exon-exon | HPD | 12 | - | ZNF717 | 3 | - |
| exon-exon | AHI1 | 6 | - | GLS | 2 | + |
| intron-exon | CPM | 12 | - | RBM48 | 7 | + |
| intron-exon | MRTO4 | 1 | - | EMC1 | 1 | - |
| exon-exon | LOC105371308 | 16 | - | LOC105371307 | 16 | - |
| exon-intron | LOC102723636 | 20 | + | LOC107987280 | 20 | + |
| exon-exon | FXR1 | 3 | + | KLHL24 | 3 | + |
| exon-exon | PPP6R3 | 11 | + | PREPL | 2 | - |
| exon-exon | ARL16 | 17 | - | LPIN1 | 2 | + |
| intron-exon | SEC22B4P | 1 | + | DGKZ | 11 | + |
| exon-intron | RN7SL712P | X | - | L3MBTL4 | 18 | - |
| exon-exon | RNA45SN1 | 21 | + | MPHOSPH9 | 12 | - |
| exon-exon | ATP5MF | 7 | - | PTCD1 | 7 | - |
| intron-exon | PDCL | 9 | - | OR1B1 | 9 | - |
| intron-exon | VPS13B | 8 | + | CUL4B | X | - |
| exon-intron | RNU5B-1 | 15 | + | SYCP2 | 20 | + |
| exon-intron | UBXN2B | 8 | + | WDR7 | 18 | + |
| exon-intron | CHRNA2 | 8 | - | CAPN3 | 15 | + |
| intron-exon | HERC1 | 15 | - | CLIC4 | 1 | + |
| intron-exon | PACS2 | 14 | - | APLP2 | 11 | + |
| exon-exon | RNA45SN3 | 21 | + | ARIH2 | 3 | + |
| intron-exon | RNR2 | MT | + | TUT1 | 11 | - |
| exon-intron | MRPS6 | 21 | + | AP000317.2 | 21 | + |
| intron-exon | SERINC1 | 6 | - | TOMM20 | 1 | - |
| exon-exon | HCG18 | 6 | - | TRIM26 | 6 | - |
| exon-exon | MACIR | 5 | + | PAM | 5 | + |
| exon-intron | LOC388780 | 20 | + | AL121899.2 | 20 | + |
| exon-exon | RNA5S6 | 1 | - | SENP2 | 3 | + |
| intron-exon | LOC111875821 | 10 | - | STN1 | 10 | - |
| intron-exon | RANBP2 | 2 | + | PPP1R16B | 20 | + |
| exon-exon | LOC101928832 | X | + | CD99L2 | X | - |
| exon-exon | CDKN1B | 12 | + | ADGRG1 | 16 | + |
| exon-exon | TRK-CTT1-1 | 14 | - | PLAGL2 | 20 | - |
| exon-exon | PRKCQ | 10 | - | RSU1 | 10 | - |
| exon-exon | ITPRID1 | 7 | + | BBS9 | 7 | + |
| intron-exon | AC113607.1 | 2 | - | LOC105373481 | 2 | - |
| exon-exon | RNU1-1 | 1 | - | ATP6V1B2 | 8 | + |
| exon-exon | LOC112267857 | 6 | + | SH3BGRL2 | 6 | + |
| exon-exon | DTNA | 18 | + | RPRD1A | 18 | - |
| intron-exon | TASP1 | 20 | - | AZIN1 | 8 | - |
| exon-exon | LOC101927646 | 13 | - | LOC112268112 | 13 | - |
| exon-exon | RNA45SN3 | 21 | + | FAM107B | 10 | - |
| exon-intron | TCF25 | 16 | + | MC1R | 16 | + |
| exon-exon | AASDH | 4 | - | CRACD | 4 | + |
| intron-exon | CLIC5 | 6 | + | ENPP4 | 6 | + |
| exon-exon | RNF11 | 1 | + | NLRP2 | 19 | + |
| exon-intron | LOC105372442 | 19 | + | AC011483.1 | 19 | + |
| intron-exon | SEC22B4P | 1 | + | CLIP3 | 19 | - |
| exon-intron | KCNAB1 | 3 | + | HNRNPUL2-BSCL2 | 11 | - |
| exon-exon | LOC105378230 | 5 | - | CCDC69 | 5 | - |
| exon-intron | RNA45SN2 | 21 | + | FAM171A1 | 10 | - |
| exon-exon | RNA45SN3 | 21 | + | ZNF74 | 22 | + |
| exon-exon | S100A1 | 1 | + | AEBP2 | 12 | + |
| exon-intron | CYLD | 16 | + | TENT4B | 16 | + |
| intron-exon | CCDC200 | 17 | - | PYGM | 11 | - |
| exon-exon | RNU6-2 | 19 | + | SLC15A2 | 3 | + |
| exon-exon | SIRT4 | 12 | - | ATP6V1B2 | 8 | + |
| exon-exon | RNU4-2 | 12 | - | EGR3 | 8 | - |
| exon-exon | ZNF736 | 7 | + | RHBDD1 | 2 | + |
| intron-exon | PTTG1IP | 21 | - | PLP1 | X | + |
| exon-intron | ISCA1 | 9 | - | TRAP1 | 16 | - |
| intron-exon | AC022182.1 | 8 | + | CLVS1 | 8 | + |
| exon-exon | RNA45SN3 | 21 | + | TMEM185B | 2 | - |
| intron-exon | RP11-739N20.2 | 1 | + | MDM4 | 1 | + |
| exon-exon | SRP9 | 1 | + | EPHX1 | 1 | + |
| exon-exon | HS3ST1 | 4 | - | EXD2 | 14 | + |
| intron-exon | CCDC200 | 17 | - | ELMO1 | 7 | - |
| intron-exon | XXYLT1 | 3 | + | DDX23 | 12 | - |
| exon-exon | MUSK | 9 | + | NUP133 | 1 | - |
| intron-exon | LOC105377921 | 6 | - | PREP | 6 | - |
| exon-exon | RNA45SN1 | 21 | + | SDCBP | 8 | + |
| exon-exon | RNA45SN3 | 21 | + | ZFP36L1 | 14 | - |
| exon-exon | RBPJ | 4 | + | SNX9 | 6 | + |
| exon-exon | H2BC21 | 1 | - | CAPZA1 | 1 | + |
| exon-exon | BLCAP | 20 | - | PIGT | 20 | + |
| exon-exon | RNA45SN3 | 21 | + | KRT6A | 12 | - |
| exon-intron | ZNF781 | 19 | - | ZFP30 | 19 | - |
| exon-exon | NAP1L1 | 12 | - | UBC | 12 | - |
| exon-exon | WDR74 | 11 | - | HLA-A | 6 | + |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | LOC107986355 | 5 | + | GUSBP16 | 5 | + |
| intron-exon | RNA5-8SP10 | 21 | + | BGN | X | + |
| exon-intron | TSC22D3 | X | - | IGH | 14 | + |
| exon-exon | SIRT4 | 12 | - | NXPE4 | 11 | - |
| exon-intron | LOC105373785 | 2 | - | LINC01473 | 2 | - |
| intron-exon | SLC44A4 | 6 | + | EHMT2 | 6 | + |
| intron-exon | LOC101928626 | 1 | - | PKM | 15 | - |
| exon-exon | ND2 | MT | + | C9orf78 | 9 | - |
| intron-exon | LOC107985736 | 1 | - | IDH3B | 20 | - |
| exon-exon | PAGR1 | 16 | - | HADHB | 2 | + |
| exon-exon | CHP1 | 15 | + | CHP1 | 15 | - |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| exon-intron | LOC112268458 | 3 | - | AC024560.2 | 3 | - |
| exon-intron | NAT8 | 2 | + | ALMS1P1 | 2 | + |
| exon-exon | PAGR1 | 16 | - | LOC112268170 | 16 | - |
| intron-exon | TRS-GCT5-1 | 6 | + | ZSCAN9 | 6 | + |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-72 | 14 | - |
| exon-exon | RSPRY1 | 16 | + | LOC107983990 | 16 | + |
| intron-exon | LOC113174982 | 6 | - | TDP2 | 6 | - |
| intron-exon | IGH | 14 | - | IGHV3-74 | 14 | - |
| exon-exon | REPIN1 | 7 | - | LOC105375563 | 7 | - |
| intron-exon | IGH | 14 | - | IGHA1 | 14 | - |
| exon-exon | RNU6-1 | 15 | - | HLA-C | 6 | - |
| exon-intron | OGA | 10 | - | SLC36A1 | 5 | + |
| intron-exon | FAM107B | 10 | - | SLC25A25-AS1 | 9 | - |
| exon-intron | RNA45SN1 | 21 | + | ELF3-AS1 | 1 | + |
| exon-exon | RNA45SN2 | 21 | + | CYP2S1 | 19 | + |
| intron-exon | CNOT1 | 16 | - | ELF3 | 1 | + |
| exon-exon | RN7SK | 6 | + | KIF16B | 20 | - |
| exon-exon | RNA45SN1 | 21 | + | STRA6 | 15 | - |
| exon-exon | RN7SK | 6 | + | TAF2 | 8 | - |
| exon-exon | RN7SK | 6 | + | TIMM44 | 19 | - |
| intron-exon | AC091214.1 | 12 | + | TMTC2 | 12 | + |
| exon-exon | FOXQ1 | 6 | - | LOC107986554 | 6 | - |
| exon-intron | UBA6-AS1 | 4 | + | GNRHR | 4 | + |
| intron-exon | PRKCH | 14 | - | PRKCH | 14 | + |
| intron-exon | MYH9 | 22 | + | CA12 | 15 | - |
| exon-exon | ADM | 11 | + | ATF4 | 22 | + |
| intron-exon | SEPTIN9-DT | 17 | + | SEPTIN9 | 17 | + |
| exon-exon | FTH1 | 11 | - | LOC107984334 | 11 | - |
| intron-exon | RPS12 | 6 | + | SERINC1 | 6 | - |
| intron-exon | AC004691.2 | 7 | + | AQP1 | 7 | + |
| intron-exon | RP11-104E19.1 | 14 | + | LOC105370413 | 14 | + |
| exon-intron | LY6D | 8 | + | RP11-706C16.8 | 8 | + |
| exon-exon | STK38 | 6 | - | RBM5 | 3 | + |
| exon-exon | WWTR1 | 3 | - | TTC27 | 2 | + |
| intron-exon | LSAMP | 3 | + | MTA3 | 2 | + |
| exon-exon | TMEM44 | 3 | + | LSG1 | 3 | + |
| exon-exon | RPL23 | 17 | - | CD164 | 6 | - |
| exon-exon | LOC107985664 | X | - | ZDHHC15 | X | - |
| exon-exon | SIRT4 | 12 | - | OS9 | 12 | + |
| exon-exon | RNVU1-18 | 1 | - | SLC9A3R1 | 17 | + |
| exon-exon | IKZF2 | 2 | - | DOCK2 | 5 | + |
| intron-exon | JAKMIP2 | 5 | + | LOC105378218 | 5 | + |
| intron-exon | ARHGEF4 | 2 | + | PTPRZ1 | 7 | + |
| exon-exon | TMBIM1 | 2 | - | H19 | 11 | - |
| exon-exon | WDR74 | 11 | - | DHTKD1 | 10 | + |
| intron-exon | LOC107986991 | 9 | - | NEBL | 10 | - |
| exon-exon | MET | 7 | + | FAM3C2 | X | + |
| exon-exon | LIPT1 | 2 | + | MRPL30 | 2 | + |
| exon-exon | RNU6-2 | 19 | + | ANKRD42 | 11 | + |
| exon-exon | RNA45SN3 | 21 | + | STAT6 | 12 | - |
| exon-exon | ISCA1 | 9 | - | GOLM1 | 9 | - |
| exon-exon | STAG1 | 3 | - | ANKRD10 | 13 | + |
| exon-intron | RNA45SN1 | 21 | + | TMTC4 | 13 | - |
| intron-exon | TSTD2 | 9 | + | KRT4 | 12 | - |
| exon-exon | RNA45SN3 | 21 | + | KRT5 | 12 | - |
| intron-exon | CCDC200 | 17 | - | ZBTB5 | 9 | - |
| intron-exon | ZBTB7B | 1 | - | SHC1 | 1 | - |
| intron-exon | LOC107986009 | 3 | - | LMCD1-AS1 | 3 | - |
| intron-exon | LOC105370449 | 14 | - | HNRNPH3 | 10 | + |
| intron-exon | IGSF11 | 3 | - | NELL2 | 12 | - |
| intron-exon | C5orf15 | 5 | - | RNA45SN2 | 21 | + |
| exon-exon | IREB2 | 15 | + | OXR1 | 8 | + |
| exon-exon | H4C15 | 1 | - | SHC1 | 1 | - |
| intron-exon | CCDC200 | 17 | - | KRT6A | 12 | - |
| exon-exon | H19 | 11 | - | VCPIP1 | 8 | - |
| intron-exon | AC089987.2 | 12 | - | C12orf54 | 12 | - |
| intron-exon | RNU1-2 | 1 | + | SERINC1 | 6 | - |
| exon-exon | C4orf3 | 4 | - | ECT2 | 3 | + |
| exon-intron | RNA45SN2 | 21 | + | BCL6 | 3 | - |
| exon-exon | GAPDH | 12 | + | SON | 21 | + |
| exon-intron | CTSC | 11 | - | WWC3 | X | + |
| exon-intron | LOC101927045 | 14 | + | RP11-104E19.1 | 14 | + |
| exon-intron | TMBIM6 | 12 | + | RPS6KA1 | 1 | + |
| intron-exon | PUDPP2 | 1 | - | TCHH | 1 | - |
| intron-exon | LOC105371814 | 17 | + | UBE2Z | 17 | + |
| intron-exon | RNU1-27P | 14 | + | ATG13 | 11 | + |
| exon-exon | KRT13 | 17 | - | GDI2 | 10 | - |
| exon-exon | RNA45SN1 | 21 | + | ATP1A1 | 1 | + |
| exon-exon | RPL23A | 17 | + | LONP1 | 19 | - |
| intron-exon | RNR2 | MT | + | TBRG4 | 7 | - |
| exon-exon | RNVU1-18 | 1 | - | STK35 | 20 | + |
| exon-exon | TAB1 | 22 | + | MSL2 | 3 | - |
| exon-exon | MUC20 | 3 | + | EEF1G | 11 | - |
| intron-exon | RFC1 | 4 | - | HDLBP | 2 | - |
| exon-exon | RN7SK | 6 | + | IRF6 | 1 | - |
| exon-exon | RNA45SN3 | 21 | + | WWTR1 | 3 | - |
| exon-exon | HSP90AB1 | 6 | + | ANKLE2 | 12 | - |
| intron-exon | RP11-104E19.1 | 14 | + | LOC105370413 | 14 | + |
| exon-exon | RNA45SN2 | 21 | + | LMNA | 1 | + |
| exon-exon | HIF1A-AS3 | 14 | - | NCKAP1 | 2 | - |
| exon-exon | UBB | 17 | + | SLC15A2 | 3 | + |
| exon-exon | LIPT1 | 2 | + | MRPL30 | 2 | + |
| intron-exon | RP11-104E19.1 | 14 | + | LOC107984667 | 14 | + |
| exon-exon | BGN | X | + | H19 | 11 | - |
| exon-exon | ERMP1 | 9 | + | ATP6AP1 | X | + |
| exon-exon | RNA45SN3 | 21 | + | KCNK6 | 19 | + |
| exon-exon | PPIP5K1 | 15 | - | GGA3 | 17 | - |
| intron-exon | CDR1 | X | + | LINC00632 | X | + |
| intron-exon | LOC107985736 | 1 | - | KIFBP | 10 | + |
| intron-exon | ANKRD19P | 9 | - | LOC101929748 | 9 | - |
| intron-exon | RP11-79N23.1 | 6 | + | TAF9B | X | - |
| exon-exon | RNVU1-7 | 1 | - | NUMB | 14 | - |
| exon-exon | RRP12 | 10 | - | RNA45SN2 | 21 | + |
| exon-exon | OIP5-AS1 | 15 | + | ITGB5 | 3 | - |
| intron-exon | ZSCAN5A | 19 | + | CRYBG2 | 1 | - |
| exon-exon | RPL7 | 8 | - | AP1G2 | 14 | - |
| exon-exon | PGD | 1 | + | ESRP1 | 8 | + |
| exon-exon | RN7SK | 6 | + | PSMD1 | 2 | + |
| exon-exon | ABCD3 | 1 | + | EXOC4 | 7 | + |
| exon-exon | RNA45SN1 | 21 | + | SCAF11 | 12 | - |
| exon-exon | TSKU | 11 | + | KDM5A | 12 | - |
| intron-exon | LINC01416 | 18 | + | LOC107985164 | 18 | + |
| exon-exon | ARPC3 | 12 | - | GLUD1 | 10 | - |
| exon-exon | LOC107985400 | 20 | + | LOC105372582 | 20 | + |
| intron-exon | AL162311.3 | 14 | - | NUTF2P2 | 14 | - |
| exon-exon | RNA45SN2 | 21 | + | PTPRZ1 | 7 | + |
| exon-exon | LOC105372295 | 19 | + | USP36 | 17 | - |
| intron-exon | LOC105370449 | 14 | - | NUP155 | 5 | - |
| exon-intron | LOC105377505 | 4 | + | AC092593.2 | 4 | - |
| intron-exon | AC100860.1 | 8 | + | LOC105375784 | 8 | + |
| exon-exon | PCDHB8 | 5 | + | PCDHB16 | 5 | + |
| intron-exon | LOC100132057 | 1 | - | LINC01138 | 1 | - |
| exon-exon | YME1L1 | 10 | + | MASTL | 10 | + |
| exon-exon | CHCHD4 | 3 | - | BIRC6 | 2 | + |
| exon-exon | LINC01232 | 13 | + | LINC00449 | 13 | + |
| intron-exon | PUDPP2 | 1 | - | TCHH | 1 | - |
| exon-exon | HIF1A | 14 | + | NRP1 | 10 | + |
| exon-exon | B3GALT5 | 21 | + | IGSF5 | 21 | + |
| exon-exon | CSNK1A1 | 5 | - | ZBTB5 | 9 | - |
| intron-exon | RNVU1-14 | 1 | + | SKIL | 3 | + |
| intron-exon | RAP2C | X | + | RAP2C-AS1 | X | + |
| exon-exon | RRN3P3 | 16 | - | LOC440346 | 16 | - |
| exon-exon | RNA45SN2 | 21 | + | GPNMB | 7 | + |
| intron-exon | MED13L | 12 | - | CCL13 | 17 | + |
| exon-exon | RNA45SN2 | 21 | + | VASP | 19 | + |
| intron-exon | REV1 | 2 | - | ZNF385A | 12 | - |
| intron-exon | CUL4A | 13 | - | PCID2 | 13 | - |
| intron-exon | CCDC200 | 17 | - | TAPBPL | 12 | + |
| intron-exon | LOC105370449 | 14 | - | HNRNPUL2-BSCL2 | 11 | - |
| intron-exon | AC005225.2 | 14 | - | ACOT6 | 14 | - |
| exon-exon | RNU4-2 | 12 | - | FUCA1 | 1 | - |
| intron-exon | SLC66A1L | 3 | - | HNRNPLL | 2 | - |
| intron-exon | LOC643339 | 12 | - | LOC101927098 | 20 | - |
| intron-exon | RNR1 | MT | + | DNTTIP2 | 1 | - |
| exon-exon | CD44 | 11 | + | PDHX | 11 | + |
| intron-exon | LOC107986779 | 7 | - | GSDME | 7 | - |
| exon-intron | RNA45SN2 | 21 | + | CHURC1-FNTB | 14 | + |
| intron-exon | BORCS7-ASMT | 10 | - | PTGES3P4 | 10 | - |
| exon-exon | GIGYF2 | 2 | + | XRCC5 | 2 | + |
| intron-exon | RAB23 | 6 | + | PRIM2 | 6 | + |
| exon-exon | SBF2-AS1 | 11 | + | TMEM130 | 7 | - |
| exon-exon | CYTOR | 2 | + | ANAPC1P4 | 2 | + |
| exon-intron | PGBD2 | 1 | + | CENPBD1P1 | 19 | + |
| exon-exon | SIRT4 | 12 | - | BCCIP | 10 | + |
| exon-exon | LINC00968 | 8 | - | LOC101929398 | 8 | - |
| exon-exon | TUBB | 6 | + | ZNF121 | 19 | + |
| exon-exon | SIRT4 | 12 | - | GORASP2 | 2 | + |
| exon-exon | H4C12 | 6 | - | ARL2BP | 16 | + |
| exon-exon | SNU13 | 22 | - | ANXA2 | 15 | - |
| exon-exon | LINCR-0002 | 3 | + | GDI2 | 10 | - |
| exon-intron | PPP2R3B | Y | + | AL732314.6 | X | + |
| exon-exon | DEDD2 | 19 | - | KPNA3 | 13 | - |
| exon-exon | HDAC7 | 12 | - | CHUK | 10 | - |
| intron-exon | SEC22B4P | 1 | + | HNRNPK | 9 | - |
| exon-exon | H4C5 | 6 | + | RNASEH2C | 11 | - |
| exon-exon | TRDMT1 | 10 | - | NID2 | 14 | - |
| intron-exon | TMEM108 | 3 | + | STK24 | 13 | - |
| exon-exon | F8A2 | X | - | CLIC2 | X | - |
| intron-exon | LOC107985736 | 1 | - | NPRL3 | 16 | - |
| exon-exon | LOC644456 | 2 | + | LINC01122 | 2 | + |
| exon-intron | LOC400940 | 2 | + | SILC1 | 2 | + |
| intron-exon | KIZ | 20 | + | VKORC1 | 16 | - |
| exon-exon | EEF1B2 | 2 | + | CDR1 | X | + |
| exon-exon | ND5 | MT | + | CES2 | 16 | + |
| exon-exon | RNA45SN3 | 21 | + | NEPRO | 3 | - |
| exon-exon | LRRC59 | 17 | - | EME1 | 17 | - |
| exon-exon | TMEM91 | 19 | + | PI4KAP2 | 22 | - |
| exon-exon | NAP1L1 | 12 | - | RNA45SN1 | 21 | + |
| exon-exon | RNA45SN3 | 21 | + | TUBB | 6 | + |
| exon-exon | EWSR1 | 22 | + | LOC644584 | 14 | + |
| exon-exon | SIRT4 | 12 | - | HNRNPH1 | 5 | - |
| intron-exon | DHFR | 5 | - | HNRNPA1P12 | 5 | - |
| exon-exon | GNAQ | 9 | - | DYNC1I2 | 2 | + |
| exon-intron | LOC101928338 | 11 | + | LOC107984419 | 11 | + |
| exon-exon | RNA45SN1 | 21 | + | ATCAY | 19 | + |
| exon-exon | ZNF711 | X | + | GNAO1 | 16 | + |
| intron-exon | DNAJC8 | 1 | - | PTAFR | 1 | - |
| exon-exon | LINC01104 | 2 | + | NLGN1 | 3 | + |
| exon-exon | ZEB2 | 2 | - | GTDC1 | 2 | - |
| intron-exon | RPL4 | 15 | - | CRYZ | 1 | - |
| exon-exon | AZIN1 | 8 | - | TRIM46 | 1 | + |
| exon-exon | ZBED5 | 11 | - | LOC107985803 | 2 | + |
| exon-exon | GABRB3 | 15 | - | FAF1 | 1 | - |
| exon-exon | LOC100129620 | 1 | + | FGF13 | X | - |
| exon-exon | RNA45SN3 | 21 | + | UBC | 12 | - |
| intron-exon | APOO | X | - | NONO | X | + |
| exon-exon | RPL13A | 19 | + | CERK | 22 | - |
| exon-exon | RNU1-2 | 1 | + | REPS1 | 6 | - |
| exon-exon | ZNF559 | 19 | + | ZNF177 | 19 | + |
| exon-exon | RPL34 | 4 | + | KDM5B | 1 | - |
| intron-exon | LINC02762 | 11 | + | KCNJ11 | 11 | - |
| exon-exon | ATP5F1A | 18 | - | TSC22D1 | 13 | - |
| exon-exon | NCKAP1 | 2 | - | PACRGL | 4 | + |
| exon-exon | RNVU1-7 | 1 | - | SMYD5 | 2 | + |
| intron-exon | ZNF132 | 19 | - | ZNF584 | 19 | + |
| exon-intron | OGFR | 20 | + | KLHL17 | 1 | + |
| exon-exon | RN7SK | 6 | + | HSPA8 | 11 | - |
| exon-exon | SRSF5 | 14 | + | SLITRK2 | X | + |
| exon-exon | LINC01122 | 2 | + | BCL11A | 2 | - |
| exon-exon | RNA45SN1 | 21 | + | MARS1 | 12 | + |
| exon-intron | PLK3 | 1 | - | BEST4 | 1 | - |
| exon-exon | RNA45SN3 | 21 | + | APLP1 | 19 | + |
| exon-intron | RNU6-9 | 19 | + | M6PR | 12 | - |
| exon-exon | RN7SK | 6 | + | TRAF2 | 9 | + |
| intron-exon | RPL17 | 18 | - | ZMIZ1 | 10 | + |
| exon-intron | EBP | X | + | AF196969.1 | X | + |
| exon-exon | RNU1-2 | 1 | + | UBC | 12 | - |
| intron-exon | RNR2 | MT | + | ZFP62 | 5 | - |
| exon-exon | EEF1G | 11 | - | SCD | 10 | + |
| exon-exon | RNA45SN2 | 21 | + | SLC16A14 | 2 | - |
| exon-intron | ZNRD1ASP | 6 | - | HLA-K | 6 | - |
| intron-exon | HSPA9 | 5 | - | NEFL | 8 | - |
| exon-intron | SGCB | 4 | - | AL356776.2 | 6 | + |
| intron-exon | SORBS2 | 4 | - | GPM6A | 4 | - |
| exon-intron | TMEM30A-DT | 6 | + | FILIP1 | 6 | + |
| exon-exon | CIRBP | 19 | + | PKNOX1 | 21 | + |
| exon-exon | RNU6-8 | 14 | - | GBA2 | 9 | - |
| exon-intron | SNORD3A | 17 | + | WDR24 | 16 | + |
| exon-exon | RNA45SN2 | 21 | + | FN1 | 2 | - |
| exon-exon | ACTB | 7 | - | RNA45SN1 | 21 | + |
| exon-exon | H2AC17 | 6 | - | GPM6B | X | - |
| exon-exon | RNA45SN3 | 21 | + | GDI1 | X | + |
| exon-exon | RNU1-1 | 1 | - | RPL37 | 5 | - |
| exon-exon | RNVU1-18 | 1 | - | CENPT | 16 | - |
| exon-exon | DAAM1 | 14 | + | IREB2 | 15 | + |
| exon-exon | TMEM108 | 3 | + | KLHL1 | 13 | - |
| exon-exon | ZMYM3 | X | + | NONO | X | + |
| intron-exon | SEC22B4P | 1 | + | NIN | 14 | - |
| exon-exon | RNU6-5P | 2 | - | MAPRE2 | 18 | + |
| exon-intron | LOC105378179 | 14 | - | PPP1R15A | 19 | + |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RNA45SN2 | 21 | + | GET4 | 7 | + |
| exon-exon | LOC105379574 | 1 | - | RUNX1T1 | 8 | - |
| exon-exon | LINC01089 | 12 | - | IARS1 | 9 | - |
| exon-exon | MAP9 | 4 | - | NSUN6 | 10 | - |
| exon-exon | F2R | 5 | + | RNA45SN3 | 21 | + |
| intron-exon | RNR2 | MT | + | WDR33 | 2 | - |
| exon-intron | POLD4 | 11 | - | SEZ6 | 17 | - |
| exon-exon | RNA45SN2 | 21 | + | EEF1A1P6 | 7 | - |
| exon-exon | GOSR1 | 17 | + | USP38 | 4 | + |
| exon-exon | H3C7 | 6 | - | EEF1A1P6 | 7 | - |
| exon-exon | TUBB2B | 6 | - | DYRK2 | 12 | + |
| intron-exon | MAMDC2-AS1 | 9 | + | MAMDC2 | 9 | + |
| exon-exon | RNA45SN2 | 21 | + | GATC | 12 | + |
| exon-exon | TMEM107 | 17 | - | SLC4A1AP | 2 | + |
| exon-exon | NNAT | 20 | + | USP9X | X | + |
| intron-exon | AC006296.3 | 4 | + | LOC105374496 | 4 | + |
| exon-exon | RNA45SN1 | 21 | + | ZFAND5 | 9 | - |
| exon-exon | SIRT4 | 12 | - | ABCB8 | 7 | + |
| exon-exon | RUNX1T1 | 8 | - | TNFRSF10B | 8 | - |
| intron-exon | SEMA3F-AS1 | 3 | - | RBM18 | 9 | - |
| intron-exon | AC074011.1 | 2 | - | PLB1 | 2 | - |
| exon-exon | H2BC10 | 6 | + | MRPL10 | 17 | - |
| exon-intron | RNU6-2 | 19 | + | DGCR8 | 22 | + |
| exon-exon | TOMM20 | 1 | - | DCAF6 | 1 | + |
| intron-exon | PDS5B | 13 | + | CBLB | 3 | - |
| intron-exon | NUTM2A-AS1 | 10 | + | NUTM2A | 10 | + |
| exon-intron | JAZF1 | 7 | - | IL7 | 8 | - |
| exon-exon | RNU6-2 | 19 | + | CHKB-CPT1B | 22 | - |
| exon-exon | DDAH1 | 1 | - | MSL1 | 17 | + |
| exon-intron | RPL13AP7 | 21 | + | APP | 21 | + |
| intron-exon | LOC107986859 | 7 | + | LOC728743 | 7 | + |
| exon-intron | PML | 15 | + | STXBP2 | 19 | + |
| exon-exon | GAS5 | 1 | - | CENPL | 1 | - |
| exon-exon | RNA45SN3 | 21 | + | MAP1S | 19 | + |
| intron-exon | RNA5-8SP10 | 21 | + | MAP1S | 19 | + |
| exon-exon | DHPS | 19 | - | WDR83 | 19 | - |
| exon-exon | CALM2 | 2 | - | GDI2 | 10 | - |
| exon-exon | DVL2 | 17 | - | BTBD2 | 19 | - |
| intron-exon | HERC3 | 4 | - | SOCS6 | 18 | + |
| exon-exon | NDRG1 | 8 | - | CSTF2 | X | + |
| exon-exon | PTPRZ1 | 7 | + | SND1 | 7 | + |
| exon-exon | ZNF776 | 19 | + | ZNF586 | 19 | + |
| exon-intron | FER1L4 | 20 | - | MMP24-AS1-EDEM2 | 20 | - |
| exon-exon | LOC102723904 | 2 | + | PPM1B | 2 | + |
| exon-intron | SAMD8 | 10 | + | ZFYVE26 | 14 | - |
| intron-exon | ENO1-AS1 | 1 | - | ENO1 | 1 | - |
| exon-exon | RNA45SN1 | 21 | + | EEF1A1 | 6 | - |
| intron-exon | RNA5-8SP10 | 21 | + | RTN3 | 11 | + |
| exon-intron | CDH6 | 5 | - | AC113386.1 | 5 | - |
| exon-intron | LOC100130459 | 4 | - | LOC101928217 | 4 | - |
| exon-exon | KMT2E | 7 | + | DYNC1I1 | 7 | + |
| intron-exon | LOC107985736 | 1 | - | OIP5-AS1 | 15 | + |
| intron-exon | RNA18SP5 | 21 | + | SLC8A2 | 19 | - |
| exon-exon | RNU1-1 | 1 | - | UBE2V2 | 8 | + |
| exon-intron | ZNF430 | 19 | + | WWC1 | 5 | - |
| exon-exon | ZNF559 | 19 | + | ZNF177 | 19 | + |
| exon-exon | RNA45SN1 | 21 | + | PMP22 | 17 | - |
| exon-exon | DANT2 | X | - | PDE4DIP | 1 | + |
| exon-intron | RNA45SN2 | 21 | + | ATP5F1A | 18 | - |
| intron-exon | PDE4D | 5 | - | KCTD2 | 17 | + |
| exon-exon | MINDY2 | 15 | + | TMEM94 | 17 | + |
| intron-exon | RNA5-8SP10 | 21 | + | SEPTIN2 | 2 | + |
| intron-exon | SCG5 | 15 | - | ARHGAP11A | 15 | - |
| exon-exon | RPS28 | 19 | + | ICMT | 1 | + |
| exon-exon | NCOA3 | 20 | + | SLAIN1 | 13 | + |
| exon-intron | RNU6ATAC | 9 | - | SH3YL1 | 2 | - |
| exon-exon | SEPTIN5 | 22 | + | RNA45SN2 | 21 | + |
| exon-intron | LOC102546294 | 5 | - | SPINK5 | 5 | - |
| exon-exon | RNU6-3P | X | - | ANKMY2 | 7 | - |
| exon-exon | RASA4 | 7 | - | SNAP25 | 20 | + |
| exon-exon | RPL28 | 19 | + | GLB1 | 3 | - |
| exon-exon | DLGAP4 | 20 | + | ZNF668 | 16 | - |
| exon-exon | KIRREL3 | 11 | - | LPAR2 | 19 | - |
| exon-exon | PRRT2 | 16 | + | CPNE7 | 16 | + |
| exon-exon | ARL6IP4 | 12 | - | ABCB9 | 12 | - |
| exon-exon | RNA45SN2 | 21 | + | UFM1 | 13 | + |
| exon-intron | GGPS1 | 1 | + | TBCE | 1 | + |
| intron-exon | RNA28SP | 21 | + | RNA45SN3 | 21 | + |
| exon-exon | ETS2 | 21 | + | SHTN1 | 10 | - |
| intron-exon | HARS1 | 5 | - | DUSP6 | 12 | - |
| exon-exon | INPP5E | 9 | + | SEC16A | 9 | + |
| intron-exon | PRDM10 | 11 | - | PPM1B | 2 | + |
| exon-exon | GFM1 | 3 | + | SMARCA2 | 9 | + |
| intron-exon | MIATNB | 22 | + | FEM1A | 19 | + |
| exon-intron | ZNF586 | 19 | + | ZNF552 | 19 | + |
| exon-exon | PPFIA2 | 12 | - | SON | 21 | + |
| exon-exon | RNA45SN2 | 21 | + | SOGA1 | 20 | - |
| exon-exon | SNHG29 | 17 | + | SEZ6 | 17 | - |
| exon-intron | TAFA1 | 3 | + | TAFA4 | 3 | + |
| exon-exon | RNU4-1 | 12 | - | PNRC2 | 1 | + |
| exon-exon | RNA45SN2 | 21 | + | PLIN3 | 19 | - |
| intron-exon | RNU6-6P | 10 | + | TAF2 | 8 | - |
| exon-intron | LINC02687 | 11 | + | LOC105376654 | 11 | + |
| intron-exon | RNR2 | MT | + | YPEL5 | 2 | + |
| exon-exon | HNRNPH1 | 5 | - | SAP130 | 2 | - |
| exon-exon | DDX5 | 17 | - | RPL13 | 16 | + |
| exon-exon | SUMO2 | 17 | - | MTUS2 | 13 | + |
| exon-exon | CHL1-AS2 | 3 | + | CHL1 | 3 | + |
| exon-exon | ZNF736 | 7 | + | SLC25A13 | 7 | - |
| exon-exon | RNU1-1 | 1 | - | ELN | 7 | + |
| exon-exon | ELN | 7 | + | BLOC1S5-TXNDC5 | 6 | - |
| exon-exon | DLST | 14 | + | ELAC2 | 17 | - |
| exon-exon | HSPB1 | 7 | + | OBSL1 | 2 | - |
| exon-exon | SNHG29 | 17 | + | DENND5B | 12 | - |
| intron-exon | RNU6-6P | 10 | + | FGG | 4 | - |
| intron-exon | AC073834.1 | 2 | + | TTC30A | 2 | + |
| exon-exon | RNA45SN2 | 21 | + | GTF3C2 | 2 | - |
| intron-exon | LOC107986560 | 6 | + | EEF1A1P5 | 9 | + |
| exon-exon | RNU5A-1 | 15 | + | EEF1A1 | 6 | - |
| exon-exon | H2BC12 | 6 | - | EEF1A1 | 6 | - |
| exon-exon | TOB2 | 22 | - | HNRNPAB | 5 | + |
| exon-exon | RNU1-2 | 1 | + | GAS7 | 17 | - |
| exon-intron | PRKG1-AS1 | 10 | - | PRKG1 | 10 | - |
| exon-exon | RNA45SN2 | 21 | + | RPL4 | 15 | - |
| intron-exon | RNR1 | MT | + | PSMD2 | 3 | + |
| intron-exon | WDR81 | 17 | - | MIR22HG | 17 | - |
| exon-exon | COX3 | MT | - | TUBA1A | 12 | - |
| exon-intron | LINC01605 | 8 | - | AC091182.2 | 8 | - |
| intron-exon | RNA5-8SP10 | 21 | + | STIP1 | 11 | + |
| exon-exon | RNA45SN3 | 21 | + | PDIA3 | 15 | + |
| intron-exon | COPS6 | 7 | - | ZNF3 | 7 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| intron-exon | RNA5-8SP10 | 21 | + | TPP2 | 13 | + |
| exon-intron | DELEC1 | 9 | + | TNC | 9 | + |
| exon-exon | HSPB6 | 19 | - | AKT1 | 14 | - |
| exon-intron | RNA45SN1 | 21 | + | FHL1 | X | + |
| exon-exon | VLDLR-AS1 | 9 | + | VLDLR | 9 | + |
| exon-exon | RNU6-5P | 2 | - | TRAPPC11 | 4 | + |
| exon-exon | COL6A3 | 2 | - | PICALM | 11 | - |
| exon-exon | H4C6 | 6 | + | EFEMP1 | 2 | - |
| exon-exon | LOXL1-AS1 | 15 | - | TBC1D21 | 15 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | ZNF703 | 8 | + | ARSJ | 4 | - |
| intron-exon | EIF4A2 | 3 | + | LMNA | 1 | + |
| exon-intron | H2AC14 | 6 | - | HMG20B | 19 | + |
| exon-exon | ARHGDIB | 12 | - | CASQ2 | 1 | - |
| intron-exon | RNR2 | MT | + | COX1 | MT | + |
| exon-exon | RNA45SN3 | 21 | + | CD34 | 1 | - |
| exon-exon | MYL3 | 3 | - | MYBPC3 | 11 | - |
| intron-exon | LOC105370449 | 14 | - | CCT7 | 2 | + |
| exon-exon | KIF1B | 1 | + | YWHAE | 17 | - |
| exon-intron | NEAT1 | 11 | + | ND4 | MT | + |
| intron-exon | LRRC40 | 1 | - | ACKR4 | 3 | + |
| intron-exon | ACVR1 | 2 | - | ND4 | MT | + |
| exon-exon | ZNF586 | 19 | + | ZNF552 | 19 | + |
| exon-intron | RNA45SN3 | 21 | + | ATP6 | MT | + |
| exon-exon | ZNF77 | 19 | - | NUP85 | 17 | + |
| exon-exon | ZDHHC20 | 13 | - | UBIAD1 | 1 | + |
| exon-intron | WDR74 | 11 | - | STOX2 | 4 | + |
| exon-exon | UTP14A | X | + | BACE2 | 21 | + |
| intron-exon | NET1 | 10 | + | ZNF420 | 19 | + |
| exon-exon | STEAP2 | 7 | + | COL6A2 | 21 | + |
| exon-intron | PGM3 | 6 | - | RNR2 | MT | + |
| exon-exon | RNA45SN1 | 21 | + | CDIPT | 16 | - |
| exon-exon | LOC105376912 | | - | WASH5P | | - |
| exon-exon | CYTH2 | 19 | + | TAF1D | 11 | - |
| exon-exon | CD164 | 6 | - | FAM168B | 2 | - |
| intron-exon | CADM2 | 3 | + | ND4 | MT | + |
| intron-exon | RNA28SP | 21 | + | IFT122 | 3 | + |
| exon-exon | RILPL2 | 12 | - | HNRNPD | 4 | - |
| exon-exon | GABPA | 21 | + | OPCML | 11 | - |
| exon-intron | MOB1A | 2 | - | TP53BP1 | 15 | - |
| exon-intron | TM4SF1 | 3 | + | ADGRB3 | 6 | + |
| exon-exon | RHOJ | 14 | + | YIPF5 | 5 | - |
| exon-exon | SLCO5A1 | 8 | - | AP5S1 | 20 | + |
| exon-exon | ALDH9A1 | 1 | - | RNA45SN3 | 21 | + |
| exon-exon | RNA45SN3 | 21 | + | TUBB3 | 16 | + |
| exon-exon | AP1G2 | 14 | - | PTMS | 12 | + |
| exon-intron | STK35 | 20 | + | ORC4 | 2 | - |
| intron-exon | SFPQ | 1 | - | CEP95 | 17 | + |
| exon-intron | RNA45SN1 | 21 | + | BGN | X | + |
| exon-intron | ACIN1 | 14 | + | LOC107984665 | | + |
| exon-exon | RPS4X | X | - | RNA45SN2 | 21 | + |
| intron-exon | FIG4 | 6 | + | MRFAP1 | 4 | + |
| exon-exon | H1-3 | 6 | - | METTL23 | 17 | + |
| exon-exon | SNRNP70 | 19 | + | IFNAR1 | 21 | + |
| exon-exon | RNA45SN1 | 21 | + | YWHAB | 20 | + |
| exon-exon | SH3RF1 | 4 | - | CMAS | 12 | + |
| exon-intron | MOB3A | 19 | - | BTBD2 | 19 | - |
| exon-intron | WBP1 | 2 | - | MOGS | 2 | - |
| intron-exon | NCKAP1 | 2 | - | FAM107A | 3 | - |
| intron-exon | KCNC3 | 19 | - | SMG1 | 16 | - |
| intron-exon | TNRC6A | 16 | + | RPL22 | 1 | - |
| exon-exon | RNA45SN1 | 21 | + | ACTB | 7 | - |
| exon-exon | GDE1 | 16 | - | COL9A3 | 20 | + |
| exon-intron | GSK3B | 3 | - | ST6GALNAC5 | 1 | + |
| intron-exon | MRPL23 | 11 | + | BRD9 | 5 | - |
| intron-exon | MEF2A | 15 | + | H19 | 11 | - |
| intron-exon | AUTS2 | 7 | + | CAST | 5 | + |
| exon-intron | LOC102723930 | 16 | + | FAM234A | 16 | + |
| intron-exon | CCDC200 | 17 | - | UBXN2A | 2 | + |
| intron-exon | GPR35 | 2 | - | SRSF12 | 6 | - |
| exon-exon | IGFBP3 | 7 | - | MAMDC2 | 9 | + |
| exon-exon | ARIH1 | 15 | - | PKM | 15 | - |
| intron-exon | H2BC4 | 6 | - | H1-6 | 6 | - |
| intron-exon | HYAL4 | 7 | - | POLR3F | 20 | + |
| intron-exon | HFM1 | 1 | - | SRP54 | 14 | + |
| intron-exon | IGFBP3 | 7 | - | SLC2A3 | 12 | - |
| exon-intron | MICA | 6 | + | HCP5 | 6 | + |
| exon-intron | LOC100419920 | 2 | + | AC009237.3 | 2 | + |
| exon-exon | RNA45SN2 | 21 | + | SERPINH1 | 11 | + |
| exon-exon | SURF4 | 9 | - | ACO2 | 22 | + |
| intron-exon | LOC107985736 | 1 | - | KPNA2 | 17 | + |
| intron-exon | RNVU1-27 | 1 | + | GNB1 | 1 | - |
| exon-exon | G3BP2 | 4 | - | AKTIP | 16 | - |
| exon-exon | WARS2-AS1 | 1 | + | LOXL2 | 8 | - |
| exon-exon | RNU1-1 | 1 | - | GPI | 19 | + |
| intron-exon | ZC3H11A | 1 | + | SEC61A1 | 3 | + |
| exon-exon | SUGP2 | 19 | - | GLUD1 | 10 | - |
| exon-intron | RNVU1-7 | 1 | - | DGKG | 3 | - |
| exon-intron | ZNF503-AS1 | 10 | + | ZNF503 | 10 | + |
| intron-exon | CCDC200 | 17 | - | MCU | 10 | + |
| exon-exon | S100A4 | 1 | - | CLK1 | 2 | - |
| exon-exon | PCOLCE | 7 | + | CFB | 6 | + |
| exon-exon | ACP2 | 11 | - | LYVE1 | 11 | - |
| intron-exon | GAS5 | 1 | - | TNFRSF1A | 12 | - |
| exon-exon | LOC101929161 | 4 | - | LOC645433 | 4 | - |
| intron-exon | UIMC1 | 5 | + | ZNF346 | 5 | + |
| exon-exon | RPS3 | 11 | + | PLCE1 | 10 | + |
| exon-exon | RNA45SN3 | 21 | + | EEF1G | 11 | - |
| exon-exon | LARP4 | 12 | + | NFIL3 | 9 | - |
| intron-exon | PCAT19 | 19 | - | LOC107985329 | 19 | - |
| exon-exon | HOTAIRM1 | 7 | + | RANBP3 | 19 | - |
| exon-exon | RNA45SN2 | 21 | + | GPC3 | X | - |
| exon-exon | UBC | 12 | - | LMNA | 1 | + |
| intron-exon | LOC116268469 | 15 | - | PKM | 15 | - |
| exon-exon | CCDC141 | 2 | - | PALM2AKAP2 | 9 | + |
| intron-exon | EMP2 | 16 | - | LINC01290 | 16 | - |
| exon-exon | UNC5C | 4 | - | RAP1GDS1 | 4 | + |
| exon-exon | RNA45SN3 | 21 | + | ANXA2 | 15 | - |
| exon-exon | COX7C | 5 | + | NSD1 | 5 | + |
| exon-exon | ABCF1-DT | 6 | - | GNL1 | 6 | - |
| exon-exon | RNA45SN2 | 21 | + | KRAS | 12 | - |
| exon-exon | A4GALT | 22 | - | CYB5R3 | 22 | - |
| intron-exon | RNR2 | MT | + | ACADM | 1 | + |
| intron-exon | LHFPL2 | 5 | - | ANXA2 | 15 | - |
| exon-exon | SLC2A3 | 12 | - | IGHV4-4 | 14 | - |
| intron-exon | SNRPA | 19 | - | C19orf54 | 19 | - |
| exon-exon | ZEB1 | 10 | + | ZNF438 | 10 | - |
| intron-exon | AC022126.1 | 5 | - | LOC105378963 | 5 | - |
| exon-exon | RNA45SN2 | 21 | + | DYNC1H1 | 14 | + |
| exon-exon | EEF1A1P5 | 9 | + | USP25 | 21 | + |
| exon-exon | LOC105372496 | 20 | + | C20orf202 | 20 | + |
| exon-exon | ITGA4 | 2 | + | RPS6KA3 | X | - |
| exon-exon | HLA-DQB1 | 6 | - | PABPC1 | 8 | - |
| exon-exon | RNA45SN3 | 21 | + | CTSA | 20 | + |
| exon-exon | RNA45SN3 | 21 | + | BGN | X | + |
| exon-exon | ATP6V1C1 | 8 | + | RAB2A | 8 | + |
| exon-exon | LINC01715 | 1 | + | GRN | 17 | + |
| exon-exon | TUBB4B | 9 | + | ITPRIP | 10 | - |
| exon-intron | RNA45SN3 | 21 | + | PTOV1 | 19 | + |
| intron-exon | RNA5-8SP10 | 21 | + | RPL13 | 16 | + |
| intron-exon | NQO2-AS1 | 6 | + | NQO2 | 6 | + |
| exon-intron | RNA45SN2 | 21 | + | IL2RG | X | - |
| exon-exon | RNA45SN1 | 21 | + | EEF1A1P5 | 9 | + |
| intron-exon | HAUS7 | X | + | BGN | X | + |
| exon-exon | FARS2 | 6 | + | RAP1B | 12 | + |
| exon-exon | RNA45SN1 | 21 | + | SCO1 | 17 | - |
| exon-intron | RNA5S6 | 1 | - | ATP6AP2 | X | + |
| intron-exon | RNR1 | MT | + | STRAP | 12 | + |
| exon-exon | RNA45SN2 | 21 | + | HSPB7 | 1 | - |
| exon-exon | RNA45SN1 | 21 | + | EEF1A1 | 6 | - |
| exon-exon | RNA45SN1 | 21 | + | ACAA1 | 3 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | RNA45SN2 | 21 | + | EIF3L | 22 | + |
| exon-exon | RNF10 | 12 | + | WARS1 | 14 | - |
| exon-intron | HES7 | 17 | + | CNP | 17 | + |
| exon-exon | RNA45SN1 | 21 | + | UBC | 12 | - |
| intron-exon | RNR2 | MT | + | LMNA | 1 | + |
| exon-exon | RNA45SN2 | 21 | + | TGFBI | 5 | + |
| exon-intron | DNASE2 | 19 | - | C12orf65 | 12 | - |
| exon-exon | RNA5S15 | 1 | - | UCP2 | 11 | - |
| exon-intron | SLC16A1-AS1 | 1 | - | SLC16A1 | 1 | - |
| exon-exon | RNU5A-1 | 15 | + | BUB3 | 10 | + |
| intron-exon | CCDC200 | 17 | - | TMEM230 | 20 | - |
| exon-exon | RPSA | 3 | + | RHOA | 3 | - |
| exon-intron | RNA45SN1 | 21 | + | AKT3 | 1 | + |
| intron-exon | TRL-TAA1-1 | 6 | + | PSMA1 | 11 | - |
| exon-exon | LINC02249 | 15 | + | LOC102724078 | 15 | - |
| intron-exon | ETFBKMT | 12 | - | AK4P3 | | - |
| intron-exon | KIF1B | 1 | + | PKM | 15 | - |
| exon-exon | RNU5B-1 | 15 | + | KPNA2 | 17 | + |
| exon-exon | RNA5S6 | 1 | - | SHLD2 | | + |
| exon-exon | LINC01816 | 2 | - | ZNF346 | 5 | + |
| exon-exon | RNA5S6 | 1 | - | SAMD4B | 19 | + |
| exon-exon | RNA5S8 | 1 | - | EEF1G | 11 | - |
| exon-intron | RNU5B-1 | 15 | + | RPL4 | 15 | - |
| intron-exon | CORO7-PAM16 | 16 | - | TSPAN3 | 15 | - |
| exon-exon | SIRT4 | 12 | - | CCNA2 | 4 | - |
| intron-exon | TMEM69 | 1 | - | GPBP1L1 | 1 | - |
| exon-exon | ARID4B | 1 | - | GGPS1 | 1 | + |
| exon-exon | ND2 | MT | + | DNTTIP2 | 1 | - |
| exon-intron | IGFBPL1 | 9 | - | IGFBPL1 | 9 | + |
| intron-exon | LINC01797 | 2 | + | LINC01798 | 2 | + |
| intron-exon | ZFAS1 | 20 | + | SRSF3 | 6 | + |
| intron-exon | LOC107986560 | 6 | + | EEF1A1 | 6 | - |
| exon-exon | H2BC9 | 6 | + | EEF1A1 | 6 | - |
| exon-exon | SIRT4 | 12 | - | SLC46A1 | 17 | - |
| intron-exon | RNR2 | MT | + | CYCS | 7 | - |
| exon-exon | RNU5A-1 | 15 | + | NPM1 | 5 | + |
| exon-exon | TMEM50B | 21 | - | MACIR | 5 | + |
| exon-exon | AFF3 | 2 | - | EIF5B | 2 | + |
| exon-exon | RNA45SN1 | 21 | + | PDXK | 21 | + |
| exon-intron | ENG | 9 | - | SFT2D1 | 6 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| exon-exon | RNA45SN1 | 21 | + | ZNF469 | 16 | + |
| exon-exon | C6orf62 | 6 | - | TSC2 | 16 | + |
| exon-intron | TESPA1 | 12 | + | AC122685.1 | 12 | + |
| intron-exon | CIP2A | 3 | + | DZIP3 | 3 | + |
| intron-exon | KLHL2P1 | 4 | - | FABP2 | 4 | - |
| exon-exon | EEF1A1P5 | 9 | + | TPTEP2-CSNK1E | 22 | - |
| exon-exon | FTO | 16 | + | EEF1A1 | 6 | - |
| exon-exon | H2BC18 | 1 | - | MOB3C | 1 | - |
| intron-exon | LOC105377663 | 4 | + | CEP135 | 4 | + |
| intron-exon | LINC00390 | 13 | + | SMIM2-AS1 | 13 | + |
| intron-exon | RNA5-8SP10 | 21 | + | EEF1A1 | 6 | - |
| intron-exon | C8orf34 | 8 | - | SLA | 8 | - |
| exon-intron | LOC101927045 | 14 | + | LOC105370413 | 14 | + |
| intron-exon | LIMS4 | 2 | - | MALL | 2 | - |
| exon-exon | LOC112268050 | 9 | - | FAM220CP | 9 | - |
| intron-exon | LOC105378228 | 5 | - | ZNF300P1 | 5 | - |
| intron-exon | RNR2 | MT | + | MBOAT7 | 19 | - |
| intron-exon | STRADB | 2 | - | STRADB | 2 | + |
| exon-exon | HSPA1A | 6 | + | HSPA1B | 6 | + |
| exon-exon | TMEM139 | 7 | + | CASP2 | 7 | + |
| exon-exon | RPARP-AS1 | 10 | + | ERICH1 | 8 | - |
| intron-exon | RNR2 | MT | + | LTA4H | 12 | - |
| intron-exon | LOC105376166 | 9 | - | FAM220CP | 9 | - |
| exon-exon | SGPL1 | 10 | + | HPN | 19 | + |
| intron-exon | MAP3K8 | 10 | - | GOLGA2P6 | 10 | - |
| intron-exon | LOC107985736 | 1 | - | MAEA | 4 | + |
| exon-exon | ND4 | MT | + | VLDLR | 9 | + |
| exon-exon | DECR2 | 16 | + | UBA1 | X | + |
| exon-exon | RNA45SN2 | 21 | + | ND4 | MT | + |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | RNA45SN2 | 21 | + | SURF4 | 9 | - |
| intron-exon | RNA5-8SP10 | 21 | + | PCK2 | 14 | + |
| exon-exon | NUCKS1 | 1 | - | TBL1X | X | + |
| exon-exon | RNA45SN1 | 21 | + | STAU1 | 20 | - |
| exon-exon | POLR2J3 | 7 | - | PGM1 | 1 | + |
| exon-exon | CSDE1 | 1 | - | ZNFX1 | 20 | - |
| exon-exon | RN7SK | 6 | + | HSP90AB1 | 6 | + |
| intron-exon | CMAHP | 6 | + | DZANK1 | 20 | - |
| intron-exon | LINC00882 | 3 | - | LOC107986021 | 3 | - |
| intron-exon | RPS3 | 11 | + | ARMC5 | 16 | + |
| intron-exon | HERC3 | 4 | - | PLXNB2 | 22 | - |
| exon-intron | ORM1 | 9 | + | CARD9 | 9 | - |
| intron-exon | CBFA2T3 | 16 | + | LOC101927793 | 16 | + |
| exon-intron | GALT | 9 | + | IL11RA | 9 | + |
| exon-exon | KNG1 | 3 | + | ALB | 4 | + |
| exon-intron | RNA45SN1 | 21 | + | HNRNPUL2-BSCL2 | 11 | - |
| exon-exon | RNA45SN1 | 21 | + | DIO1 | 1 | + |
| exon-exon | MRPS25 | 3 | - | VAT1 | 17 | - |
| exon-intron | ND4 | MT | + | ACSM2B | 16 | - |
| exon-exon | MYO1B | 2 | + | RHBDD1 | 2 | + |
| intron-exon | LOC105378685 | 1 | - | ALB | 4 | + |
| exon-exon | RCC1 | 1 | + | LRBA | 4 | - |
| exon-exon | EXTL2 | 1 | - | MAX | 14 | - |
| exon-exon | LRBA | 4 | - | LSM6 | 4 | + |
| exon-exon | RCC1 | 1 | + | DROSHA | 5 | - |
| intron-exon | RNU5D-1 | 1 | - | HSP90B1 | 12 | + |
| exon-intron | RCC1 | 1 | + | GNB1 | 1 | - |
| intron-exon | LINC00578 | 3 | + | CNOT11 | 2 | + |
| exon-intron | RNA45SN1 | 21 | + | C5orf34 | 5 | - |
| exon-exon | RNA45SN2 | 21 | + | TFDP1 | 13 | + |
| intron-exon | AC005052.1 | X | - | SEPTIN6 | X | - |
| exon-intron | ZNF205 | 16 | + | NEK7 | 1 | + |
| exon-intron | ACTR6 | 12 | + | NUTM2B-AS1 | 10 | - |
| exon-exon | RNA45SN3 | 21 | + | FOS | 14 | + |
| intron-exon | IGH | 14 | - | IGHV3-49 | 14 | - |
| intron-exon | LOC107985915 | 2 | + | CLPTM1 | 19 | + |
| intron-exon | SLC5A4 | 22 | + | NUDCD3 | 7 | - |
| intron-exon | FHIT | 3 | - | UBC | 12 | - |
| exon-intron | LOC105375826 | | + | AC022568.1 | | + |
| exon-exon | ZNF586 | 19 | + | ZNF587 | 19 | + |
| intron-exon | RTL1 | 14 | + | ND4 | MT | + |
| exon-intron | MALAT1 | 11 | + | RAD21L1 | 20 | + |
| exon-exon | AHCYL1 | 1 | + | LRRC58 | 3 | - |
| intron-exon | PPP3CA | 4 | - | ACTL6A | 3 | + |
| exon-exon | RNU6-41P | 1 | - | NELFCD | 20 | + |
| exon-intron | SNORD3A | 17 | + | RNF216 | 7 | - |
| intron-exon | SNHG6 | 8 | - | NQO1 | 16 | - |
| exon-exon | ZSWIM3 | 20 | + | ZSWIM1 | 20 | + |
| intron-exon | LINC00345 | 13 | + | HNRNPA1L2 | 13 | + |
| exon-exon | RCC1 | 1 | + | GALNT16 | 14 | + |
| exon-intron | KRT7 | 12 | + | KRT86 | 12 | + |
| intron-exon | AL139339.1 | 10 | - | CALHM2 | 10 | - |
| exon-exon | AOX1 | 2 | - | KCTD18 | 2 | - |
| exon-exon | TARDBP | 1 | + | LRCH3 | 3 | + |
| intron-exon | CCDC200 | 17 | - | SHC1 | 1 | - |
| exon-exon | TULP1 | 6 | - | TEAD3 | 6 | - |
| exon-intron | CKMT2-AS1 | 5 | - | RASGRF2 | 5 | - |
| exon-exon | DAP | 5 | - | CTNNAL1 | 9 | - |
| intron-exon | SEC22B4P | 1 | + | GLO1 | 6 | - |
| exon-exon | SIRT4 | 12 | - | CNTNAP3B | 9 | - |
| exon-exon | PRC1 | 15 | - | RCCD1 | 15 | + |
| intron-exon | RPS8 | 1 | + | AKT2 | 19 | - |
| exon-exon | NID2 | 14 | - | TM9SF3 | 10 | - |
| exon-intron | FLJ46875 | 2 | + | GPD2 | 2 | + |
| exon-exon | MICB | 6 | + | TXNRD3 | 3 | - |
| intron-exon | RF00003 | 1 | - | MPHOSPH10 | 2 | + |
| exon-intron | NCBP2 | 3 | - | FBXL2 | 3 | + |
| intron-exon | EDIL3-DT | 5 | - | GBP3 | 1 | - |
| intron-exon | RNA5-8SP10 | 21 | + | ROCK1 | 18 | - |
| exon-exon | APLP2 | 11 | + | HNRNPF | 10 | - |
| exon-exon | IGFBP7 | 4 | - | TMEM263 | 12 | + |
| intron-exon | INS-IGF2 | 11 | - | PLXNA1 | 3 | + |
| exon-exon | ZSCAN30 | 18 | - | GALNT1 | 18 | + |
| exon-intron | MALAT1 | 11 | + | LOC107984361 | 11 | + |
| intron-exon | LOC107986836 | 7 | + | LMBR1 | 7 | - |
| intron-exon | HNRNPA1P48 | 16 | + | GRN | 17 | + |
| exon-exon | H2BC12 | 6 | - | TUBG1 | 17 | + |
| intron-exon | HADHA | 2 | + | HADHB | 2 | + |
| intron-exon | CCDC200 | 17 | - | DIDO1 | 20 | - |
| exon-exon | RNA45SN2 | 21 | + | ENO1 | 1 | - |
| exon-exon | RNU4-1 | 12 | - | HSP90AB1 | 6 | + |
| exon-exon | SLCO4A1 | 20 | + | UBOX5 | 20 | - |
| exon-exon | BLOC1S6 | 15 | + | DYM | 18 | - |
| exon-exon | PDZD7 | 10 | + | SFXN3 | 10 | + |
| exon-exon | ZNF738 | 19 | + | KIF1B | 1 | + |
| exon-intron | MRPS6 | 21 | + | LINC00310 | 21 | + |
| exon-exon | RNU5D-1 | 1 | - | EXOSC10 | 1 | - |
| intron-exon | NUP93 | 16 | - | HORMAD1 | 1 | - |
| intron-exon | IGSF11 | 3 | + | LOC101928858 | 5 | - |
| exon-exon | FTH1P7 | 13 | - | HNRNPA2B1 | 7 | - |
| intron-exon | HSPA8 | 11 | - | ALDH1A1 | 9 | - |
| exon-exon | LUZP1 | 1 | - | GNB1 | 1 | - |
| exon-exon | CDKL5 | X | + | SH3KBP1 | X | - |
| exon-exon | RNU6-9 | 19 | + | EPS15L1 | 19 | - |
| intron-exon | FCGR3B | 1 | - | FCGR3A | 1 | - |
| intron-exon | LOC105370449 | 14 | - | MAP3K8 | 10 | + |
| exon-exon | TLR6 | 4 | - | PPP4R1 | 18 | - |
| intron-exon | VASP | 19 | + | OPA3 | 19 | + |
| intron-exon | CCDC200 | 17 | - | LILRB3 | 19 | - |
| exon-exon | RNA45SN3 | 21 | + | PRDM1 | 6 | + |
| exon-exon | RNVU1-18 | 1 | - | GNAI2 | 3 | + |
| intron-exon | LOC112694746 | 21 | + | KCNJ15 | 21 | + |
| intron-exon | SEC22B4P | 1 | + | FGD3 | 9 | + |
| exon-exon | CDKL5 | X | + | SH3KBP1 | X | - |
| exon-exon | WDR48 | 3 | + | ELF1 | 13 | - |
| exon-exon | DESI2 | 1 | + | TBC1D1 | 4 | + |
| exon-exon | LOC107984969 | 17 | + | BOD1L1 | 4 | - |
| exon-intron | LRRK2-DT | 12 | - | LINC02471 | 12 | - |
| intron-exon | GAS5 | 1 | - | LILRB2 | 19 | - |
| intron-exon | SNHG29 | 17 | + | ITGB2 | 21 | - |
| exon-intron | MNDA | 1 | + | SMAP2 | 1 | + |
| exon-exon | OAZ2 | 15 | - | SMARCC1 | 3 | - |
| intron-exon | SEC22B4P | 1 | + | EPSTI1 | 13 | - |
| exon-exon | RNU5A-1 | 15 | + | CXCR2 | 2 | + |
| intron-exon | LOC107985736 | 1 | - | LAMP2 | X | - |
| intron-exon | HERC3 | 4 | - | TRAPPC9 | 8 | - |
| exon-exon | LOC105379016 | 5 | - | GTF2H2 | 5 | - |
| intron-exon | SEC22B4P | 1 | + | FOS | 14 | + |
| intron-exon | SEC22B4P | 1 | + | FPR2 | 19 | + |
| exon-exon | LINC00537 | 9 | + | CBWD3 | 9 | + |
| intron-exon | LOC105370449 | 14 | - | DAZAP2 | 12 | + |
| exon-exon | RNA45SN1 | 21 | + | RAP1B | 12 | + |
| intron-exon | PTP4A3 | 8 | + | LRG1 | 19 | - |
| exon-exon | RNA45SN3 | 21 | + | DOK3 | 5 | - |
| exon-exon | PDLIM5 | 4 | + | FAM126A | 7 | - |
| exon-exon | NAIPP1 | 5 | + | NFIL3 | 9 | - |
| intron-exon | AC006511.6 | 12 | + | LOC107984128 | 10 | - |
| exon-exon | NCOA2 | 8 | - | KLHL28 | 14 | - |
| exon-exon | ZNF586 | 19 | + | ZNF587 | 19 | + |
| exon-intron | TUBA1B | 12 | + | TUBA1A | 12 | + |
| intron-exon | LOC107985736 | 1 | - | ZNF18 | 17 | - |
| intron-exon | LOC105370449 | 14 | - | SLC11A1 | 2 | + |
| exon-exon | RNU5B-1 | 15 | + | TNFRSF10C | 8 | + |
| exon-exon | PSMB7 | 9 | - | PPP4R3A | 14 | - |
| exon-exon | DPEP2 | 16 | - | DPEP3 | 16 | - |
| intron-exon | NOP58 | 2 | + | NAMPT | 7 | - |
| exon-exon | NT5C2 | 10 | - | SHOC2 | 10 | + |
| exon-exon | HINT2 | 9 | + | TMEM8B | 9 | + |
| exon-exon | RNA45SN2 | 21 | + | RRAGA | 9 | + |
| exon-exon | NSUN5 | 7 | - | RNF167 | 17 | + |
| exon-exon | PFDN2 | 1 | - | RAB7A | 3 | + |
| exon-exon | ARPC1B | 7 | + | SMARCC1 | 3 | - |
| exon-intron | IGHV4-30-2 | 14 | - | IGH | 14 | - |
| exon-exon | RNA45SN1 | 21 | + | FIG4 | 6 | + |
| exon-exon | LOC105378629 | 1 | - | MARCKSL1 | 1 | - |
| exon-exon | RNU5A-1 | 15 | + | OVGP1 | 1 | - |
| intron-exon | LOC105370449 | 14 | - | CRISP3 | 6 | - |
| exon-exon | SNORD3A | 17 | + | TAX1BP1 | 7 | + |
| exon-intron | LOC105377986 | 6 | - | AL365259.1 | 6 | - |
| exon-intron | ASRGL1 | 11 | - | AP003306.2 | 11 | - |
| exon-exon | SLC25A5-AS1 | X | + | PSMD2 | 3 | + |
| intron-exon | RNA5-8SP10 | 21 | + | ACTR3 | 2 | + |
| exon-intron | RNF19B | 1 | - | AL031602.2 | 1 | - |
| intron-exon | TUBB2B | 6 | + | LOC100422781 | 6 | + |
| exon-exon | LOC100129917 | 4 | - | PCGF3 | 4 | - |
| exon-exon | RNA45SN1 | 21 | + | HERPUD2 | 7 | - |
| exon-exon | CHD3 | 17 | + | GDI1 | X | + |
| intron-exon | AC024901.1 | 12 | + | ADARB2 | 10 | - |
| exon-exon | DTD2 | 14 | - | SCFD1 | 14 | + |
| intron-exon | UFM1 | 13 | - | COP1 | 1 | - |
| exon-intron | RNU6-2 | 19 | + | PARVA | 11 | + |
| exon-exon | AK3 | 9 | - | EHMT1 | 9 | + |
| intron-exon | AC093607.1 | 4 | + | LOC105374528 | 4 | + |
| exon-exon | ZNF776 | 19 | + | ZNF586 | 19 | + |
| exon-exon | RNA45SN2 | 21 | + | RAN | 12 | + |
| exon-exon | PDCD4 | 10 | + | CHD1L | 1 | + |
| intron-exon | AC079140.6 | 4 | - | LOC105374336 | 4 | - |
| intron-exon | AC231533.1 | X | - | SUV39H1 | X | - |
| exon-exon | RNU6-30P | X | - | UBC | 12 | - |
| intron-exon | RNR2 | MT | + | EED | 11 | + |
| exon-exon | RNA45SN2 | 21 | + | TAF15 | 17 | + |
| exon-exon | CACNA1C | 12 | + | MNAT1 | 14 | + |
| exon-exon | MAFB | 20 | - | WDR48 | 3 | + |
| exon-intron | NDUFS5 | 1 | + | FLVCR2 | 14 | - |
| exon-exon | RNU6-18P | 15 | + | DNMT1 | 19 | - |
| exon-exon | LOC441601 | 11 | - | LOC107984330 | 11 | - |
| intron-exon | RNR1 | MT | + | BZW1 | 2 | + |
| exon-exon | LOC105374235 | 3 | - | LOC107986155 | 3 | - |
| intron-exon | RNR1 | MT | + | ENO1 | 1 | - |
| intron-exon | AC073210.1 | 7 | - | CCT6P3 | 7 | - |
| exon-intron | EPCAM-DT | 2 | - | CALM2 | 2 | - |
| exon-exon | H2BC4 | 6 | - | RPL15P3 | 6 | + |
| exon-exon | GAS5 | 1 | - | CENPL | 1 | - |
| intron-exon | AC005993.1 | 14 | + | RGS6 | 14 | + |
| exon-intron | LINC01798 | 2 | + | LINC01799 | 2 | + |
| intron-exon | LOC107985942 | 2 | + | TUBB | 6 | + |
| intron-exon | SEC22B4P | 1 | + | PLA2G4C | 19 | - |
| exon-intron | EPCAM-DT | 2 | - | STPG4 | 2 | - |
| intron-exon | LOC105375287 | 7 | - | VOPP1 | 7 | - |
| exon-intron | ZNF664 | 12 | + | ZNF664-RFLNA | 12 | + |
| exon-exon | ND4L | MT | + | RAB1A | 2 | - |
| intron-exon | LOC105371159 | 16 | + | SNX29P2 | 16 | + |
| exon-exon | LOC105373467 | 1 | + | PTK2 | 8 | - |
| exon-exon | FCGR2A | 1 | - | SDHA | 5 | + |
| exon-exon | TAGLN2 | 1 | - | CFAP45 | 1 | - |
| exon-exon | RNA45SN2 | 21 | + | PLOD3 | 7 | - |
| exon-intron | EPCAM-DT | 2 | - | MSH2 | 2 | - |
| intron-exon | TBC1D5 | 3 | + | SLC66A2 | 18 | - |
| intron-exon | GABRR1 | 6 | + | ANKRD6 | 6 | + |
| exon-exon | DPF2 | 11 | + | SART1 | 11 | - |
| intron-exon | LOC107985736 | 1 | - | MAFB | 20 | - |
| exon-exon | RHBDL3 | 17 | + | ZNF207 | 17 | + |
| exon-exon | IFI16 | 1 | + | ENO1 | 1 | - |
| exon-exon | EPCAM-DT | 2 | - | PPP1R21 | 2 | + |
| exon-intron | LINC00537 | 9 | + | RP11-561O23.8 | 9 | + |
| intron-exon | TRE-CTC1-6 | 6 | + | TUBA1C | 12 | + |
| exon-intron | RNU1-2 | 1 | + | GORASP2 | 2 | + |
| exon-exon | FGD1 | X | + | GNL3L | X | + |
| exon-exon | RNU1-2 | 1 | + | IGFBP3 | 7 | - |
| exon-exon | RNU1-1 | 1 | - | DEPP1 | 10 | - |
| exon-exon | EPCAM-DT | 2 | - | SEPTIN2 | 2 | + |
| intron-exon | NCL | 2 | + | MIR31HG | 9 | - |
| intron-exon | SEC22B4P | 1 | + | MUL1 | 1 | - |
| exon-exon | LINC01429 | 20 | - | SALL4 | 20 | - |
| intron-exon | SOX2-OT | 3 | + | SLC39A1 | 1 | - |
| exon-exon | RNU1-4 | 1 | + | NREP | 5 | - |
| intron-exon | RNU6-15P | 10 | + | SLC9B2 | 4 | - |
| exon-exon | PDE3A | 12 | + | VGLL4 | 3 | - |
| exon-exon | RNU1-2 | 1 | + | PCSK7 | 11 | - |
| intron-exon | SHROOM2 | X | - | GPR143 | X | - |
| exon-exon | TPM4 | 19 | + | SEC62 | 3 | + |
| exon-exon | RNA45SN3 | 21 | + | CYP27A1 | 2 | + |
| exon-intron | RNVU1-18 | 1 | - | FADS2 | 11 | + |
| exon-exon | RNY4 | 7 | + | UBC | 12 | - |
| exon-intron | TLCD2 | 17 | - | RAPGEF4-AS1 | 2 | + |
| exon-exon | RNA45SN3 | 21 | + | EWSR1 | 22 | + |
| exon-exon | LOC107987000 | 9 | + | FAM27C | 9 | + |
| intron-exon | AL583859.1 | 10 | - | LOC107984207 | 10 | - |
| exon-exon | RHOA | 3 | - | CTNNB1 | 3 | + |
| exon-exon | RNVU1-18 | 1 | - | RAP1B | 12 | + |
| exon-exon | RNA45SN2 | 21 | + | ARMC5 | 16 | - |
| exon-exon | RNVU1-18 | 1 | - | YAP1 | 11 | + |
| exon-intron | CCDC167 | 6 | - | CMTR1 | 6 | - |
| exon-exon | PRPS1 | X | + | PRKCB | 16 | + |
| exon-exon | ZBTB8A | 1 | + | CDH12 | 5 | - |
| intron-exon | CLRN1-AS1 | 3 | + | GRIP2 | 3 | - |
| exon-exon | CNOT8 | 5 | + | ZNF207 | 17 | + |
| intron-exon | PPP1R26 | 9 | - | PPP1R26-AS1 | 9 | - |
| exon-exon | LINC00511 | 17 | - | LINC00673 | 17 | - |
| intron-exon | AL121772.1 | 20 | - | LOC105372579 | 20 | - |
| exon-exon | LOC107986556 | 6 | - | ABCA10 | 17 | - |
| exon-exon | LOC101928489 | 6 | + | CD109 | 6 | + |
| exon-intron | SNX24 | 5 | + | PPIC | 5 | + |
| exon-intron | CYP1B1-AS1 | 2 | + | LOC105374466 | 2 | + |
| intron-exon | FSTL1 | 3 | + | LOC107986121 | 3 | + |
| exon-exon | PTBP2 | 1 | + | AUTS2 | 7 | + |
| intron-exon | RNR2 | MT | + | SLC25A30 | 13 | - |
| exon-exon | LSM10 | 1 | - | STK40 | 1 | - |
| intron-exon | UBTD1 | 10 | - | MMS19 | 10 | - |
| exon-exon | IBTK | 6 | - | DDX18 | 2 | + |
| intron-exon | MFAP3 | 5 | + | GALNT10 | 5 | + |
| exon-exon | RNA5S12 | 1 | - | LRP1 | 12 | + |
| intron-exon | LOC286059 | 8 | - | TNFRSF10B | 8 | - |
| exon-exon | EIF4E | 4 | - | UBXN7 | 3 | - |
| intron-exon | RNU6-9 | 19 | + | FKRP | 19 | + |
| intron-exon | PPP1R12B | 1 | - | SETD5 | 3 | + |
| exon-intron | LOC105370159 | 13 | - | LINC00457 | 13 | - |
| exon-intron | RNU6-5P | 2 | - | TXNRD1 | 12 | + |
| exon-intron | TYSND1 | 10 | - | AIFM2 | 10 | - |
| exon-exon | ABCC11 | 16 | + | LONP2 | 16 | + |
| exon-intron | RNU6-2 | 19 | + | UBE3C | 7 | + |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | DNM1L | 12 | + | ND4 | MT | + |
| exon-exon | WNK1 | 12 | + | DNAJC3 | 13 | + |
| exon-exon | TOR1AIP2 | 1 | - | COX1 | MT | + |
| exon-exon | SCOC | 4 | + | SF3B1 | 2 | - |
| intron-exon | CNTNAP2 | 7 | - | RGMA | 15 | - |
| intron-exon | AL392023.2 | 14 | - | LOC105370456 | 14 | - |
| exon-exon | RPSA | 3 | + | ATP5F1B | 12 | - |
| exon-exon | ND4 | MT | + | EEF1A1P12 | 2 | - |
| exon-exon | VCP | 9 | - | KIAA0753 | 17 | - |
| intron-exon | TRIM6-TRIM34 | 11 | + | SERPINH1 | 11 | + |
| exon-exon | RBBP6 | 16 | + | EEF1A1P5 | 9 | + |
| intron-exon | RNA28SP | 21 | + | TPX2 | 20 | + |
| exon-exon | CUL3 | 2 | - | PRRC1 | 5 | + |
| exon-intron | EIF1AX | X | - | EIF3CL | 16 | - |
| exon-intron | KBTBD2 | 7 | - | RNR2 | MT | + |
| exon-exon | NONO | X | + | CLIP3 | 19 | - |
| exon-exon | ANKMY2 | 7 | - | RNF20 | 9 | + |
| exon-exon | FRS2 | 12 | + | COPA | 1 | - |
| intron-exon | FCMR | 1 | + | TMEM87A | 15 | - |
| exon-exon | CD46 | 1 | + | ZNF93 | 19 | + |
| exon-intron | LOC105376976 | 3 | + | SATB1-AS1 | 3 | + |
| intron-exon | CCDC33 | 15 | - | STRA6 | 15 | - |
| intron-exon | TBC1D5 | 3 | + | LOC339862 | 3 | + |
| exon-exon | ANO10 | 3 | - | DBN1 | 5 | - |
| exon-exon | RNVU1-7 | 1 | - | RNF4 | 4 | + |
| intron-exon | NPM1 | 5 | + | MELK | 9 | + |
| exon-exon | ZNF718 | 4 | + | ZNF876P | 4 | + |
| intron-exon | RNR1 | MT | + | FILIP1L | 3 | - |
| intron-exon | LOXL1-AS1 | 15 | + | LOXL1 | 15 | + |
| exon-intron | RNA45SN1 | 21 | + | LOC728485 | 19 | + |
| intron-exon | RNVU1-24 | 1 | - | DNAJC13 | 3 | + |
| exon-exon | SLCO1A2 | 12 | + | PYROXD1 | 12 | + |
| exon-exon | TIMM21 | 18 | + | HACD3 | 15 | + |
| exon-intron | WDR45 | X | - | AC231657.3 | X | - |
| exon-exon | SAR1A | 10 | - | AIFM2 | 10 | - |
| intron-exon | AC010148.1 | 2 | - | LOC101927896 | 2 | - |
| intron-exon | APOO | X | - | TPP1 | 11 | - |
| exon-exon | HOXB8 | 17 | - | CANT1 | 17 | - |
| exon-exon | WDR74 | 11 | - | TMCC2 | 1 | + |
| exon-exon | ATF4 | 22 | + | ZDHHC7 | 16 | - |
| exon-exon | TOMM7 | 7 | - | FBXW11 | 5 | - |
| intron-exon | AC114316.2 | 5 | + | LOC105379080 | 5 | + |
| exon-intron | NAB1 | 2 | - | AC006460.2 | 2 | - |
| intron-exon | LOC107985736 | 1 | - | MGAT1 | 5 | - |
| exon-exon | ZIC1 | 3 | - | AKT2 | 19 | - |
| exon-intron | LOC105376976 | 3 | + | SATB1-AS1 | 3 | + |
| exon-exon | TOPORS | 9 | - | DDX58 | 9 | - |
| exon-exon | SIRT4 | 12 | - | FKBP10 | 17 | + |
| exon-intron | ST8SIA6-AS1 | 10 | + | LOC105376436 | 10 | + |
| exon-exon | RNU5B-1 | 15 | + | CREBBP | 16 | - |
| intron-exon | ZFP36L1 | 14 | + | SMG6 | 17 | - |
| exon-exon | MIR3681HG | 2 | + | TRIB2 | 2 | + |
| exon-exon | WDR74 | 11 | - | LINC01234 | 12 | - |
| exon-exon | WDR74 | 11 | - | ZNF143 | 11 | + |
| exon-exon | RNA5S6 | 1 | - | PHGDH | 1 | + |
| exon-intron | LOC107984251 | 10 | - | LIPA | 10 | - |
| exon-exon | WDR74 | 11 | - | RHNO1 | 12 | + |
| intron-exon | SEC22B4P | 1 | + | LYPD1 | 2 | - |
| exon-exon | HOXB3 | 17 | - | PTPRA | 20 | + |
| intron-exon | SOX2-OT | 3 | + | FAM20B | 1 | + |
| exon-intron | SMIM4 | 3 | + | PBRM1 | 3 | + |
| exon-exon | FAM27E4 | 9 | + | LOC107987007 | 9 | + |
| exon-intron | LOC400710 | 19 | - | ZNF473 | 19 | - |
| intron-exon | RNR2 | MT | + | HYAL2 | 3 | - |
| intron-exon | AC004160.1 | 7 | + | LOC105375153 | 7 | + |
| intron-exon | KC6 | 18 | - | WDPCP | 2 | - |
| exon-intron | LOC107987108 | 9 | + | LINC01505 | 9 | + |
| exon-exon | SIRT4 | 12 | - | FTSJ1 | X | + |
| exon-exon | C7orf31 | 7 | - | RARS2 | 6 | - |
| intron-exon | RNU1-27P | 14 | + | AAMP | 2 | - |
| exon-intron | RNVU1-18 | 1 | - | LOC105370516 | 14 | + |
| intron-exon | AC136777.1 | 8 | - | LOC105377773 | 8 | - |
| intron-exon | RP1-27O5.3 | 1 | + | ZBTB8A | 1 | + |
| exon-exon | PAX8 | 2 | + | PAX8-AS1 | 2 | + |
| exon-intron | RNA45SN3 | 21 | + | HSP90B1 | 12 | + |
| exon-exon | SLC2A1-AS1 | 1 | - | SLC2A1 | 1 | - |
| exon-exon | LEPROT | 1 | + | IPO9 | 1 | + |
| intron-exon | CCDC200 | 17 | - | SHPRH | 6 | - |
| intron-exon | AP000487.5 | 11 | - | PPFIA1 | 11 | - |
| intron-exon | LOC108251791 | 15 | + | ALDH7A1 | 5 | - |
| exon-exon | THNSL1 | 10 | + | LINC01516 | 10 | + |
| exon-exon | RNA45SN3 | 21 | + | RTN3P1 | 4 | + |
| intron-exon | RNR2 | MT | + | SCYL2 | 12 | + |
| exon-exon | WDR74 | 11 | - | MATR3 | 5 | + |
| exon-exon | RNA45SN2 | 21 | + | GART | 21 | - |
| exon-exon | RNY5 | 7 | + | FIP1L1 | 4 | + |
| exon-exon | ASAH1 | 8 | - | SF3B3 | 16 | + |
| exon-exon | RNU1-2 | 1 | + | CSMD2 | 1 | - |
| exon-exon | RNF43 | 17 | - | LRPPRC | 2 | - |
| exon-exon | RNA45SN3 | 21 | + | MPZL1 | 1 | + |
| exon-exon | GTF2F2 | 13 | + | SMAD9 | 13 | - |
| intron-exon | MFF | 2 | - | MFF-DT | 2 | - |
| intron-exon | RNU1-27P | 14 | + | ARL6 | 3 | + |
| exon-exon | LOC105373449 | 2 | - | PTPRA | 20 | + |
| exon-exon | RNA5S10 | 1 | - | DHX35 | 20 | + |
| exon-exon | RNA45SN3 | 21 | + | IKBKB | 8 | + |
| intron-exon | RNR2 | MT | + | ADPGK | 15 | - |
| exon-exon | PYGO2 | 1 | - | PBXIP1 | 1 | - |
| intron-exon | RNR2 | MT | + | HNRNPU | 1 | - |
| exon-exon | LOC107984273 | 10 | - | GFRA1 | 10 | - |
| exon-intron | LOC105379315 | 8 | + | AC015468.4 | 8 | + |
| exon-exon | HOTAIRM1 | 7 | + | AP2A2 | 11 | + |
| exon-exon | H2BC18 | 1 | - | GOLT1B | 12 | + |
| exon-exon | LOC107985165 | 18 | + | LOC105371953 | 18 | + |
| exon-exon | HIBADH | 7 | - | GTF2IP1 | 7 | - |
| exon-exon | HOTAIRM1 | 7 | + | RNF10 | 12 | + |
| exon-intron | RNU1-2 | 1 | + | CDC23 | 5 | - |
| exon-exon | MZT2B | 2 | - | SMPD4 | 2 | - |
| intron-exon | LOC106799848 | 14 | + | CLIP3 | 19 | - |
| exon-exon | TMEM106A | 17 | + | EZH1 | 17 | - |
| exon-exon | KRT6A | 12 | - | KRT6C | 12 | - |
| intron-exon | LOC107985736 | 1 | - | ANXA1 | 9 | + |
| exon-exon | RNA45SN2 | 21 | + | TRIP6 | 7 | + |
| exon-exon | SEC22C | 3 | - | COPB1 | 11 | - |
| intron-exon | WDR43 | 2 | + | SACM1L | 3 | + |
| intron-exon | CARMIL1 | 6 | - | CMAHP | 6 | - |
| exon-exon | RNA45SN3 | 21 | + | SDHA | 5 | + |
| exon-exon | RNA45SN1 | 21 | + | TXNIP | 1 | - |
| exon-exon | PLXNB2 | 22 | - | GPC1 | 2 | + |
| exon-exon | KRT13 | 17 | - | MUC21 | 6 | + |
| exon-exon | RNA45SN1 | 21 | + | KRT4 | 12 | - |
| exon-exon | RNU6ATAC | 9 | - | DDX1 | 2 | + |
| intron-exon | HIBCH | 2 | + | INPP1 | 2 | + |
| exon-exon | SERPINB5 | 18 | + | MAPK1 | 22 | - |
| exon-exon | VPS26A | 10 | + | GYS1 | 19 | - |
| exon-exon | RPL27AP6 | 6 | - | ATP1A2 | 1 | + |
| exon-intron | GHITM | 10 | + | RNR2 | MT | + |
| exon-exon | RNA45SN1 | 21 | + | YWHAE | 17 | - |
| exon-exon | SEPTIN7 | 7 | + | SEPTIN7P3 | 7 | + |
| exon-exon | ALG14 | 1 | - | LOC158435 | 9 | + |
| exon-exon | RNU1-1 | 1 | - | GSTM2 | 1 | + |
| intron-exon | H2BC8 | 6 | - | EMC4 | 15 | + |
| exon-exon | RNU1-1 | 1 | - | PLOD3 | 7 | - |
| exon-exon | RNU1-1 | 1 | - | UBC | 12 | - |
| exon-exon | SRCIN1 | 17 | - | ARNT2 | 15 | + |
| exon-exon | CHMP5 | 9 | + | USF3 | 3 | - |
| intron-exon | SNHG1 | 11 | - | SEC61A1 | 3 | + |
| exon-exon | ROBO1 | 3 | - | GPR162 | 12 | + |
| exon-exon | H2BC4 | 6 | - | TNFRSF1A | 12 | - |
| exon-exon | NF1 | 17 | + | GTF2IP4 | 7 | + |
| exon-exon | ABCE1 | 4 | + | ZNF827 | 4 | - |
| exon-exon | ATF4 | 22 | + | RNF213 | 17 | + |
| exon-exon | MLLT11 | 1 | + | ENC1 | 5 | - |
| exon-intron | FAM86B1 | 8 | - | FAM66D | 8 | - |
| exon-exon | RNU1-1 | 1 | - | OGFOD1 | 16 | + |
| exon-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| exon-exon | RNU1-4 | 1 | + | GEMIN5 | 5 | - |
| exon-intron | ZNF559 | 19 | + | ZNF177 | 19 | + |
| intron-exon | LOC113845780 | X | - | BEX1 | X | - |
| intron-exon | ARPC4-TTLL3 | 3 | + | RNF144A | 2 | + |
| exon-exon | RN7SK | 6 | + | CDC42EP4 | 17 | - |
| exon-exon | LOC105377703 | 5 | + | ABI2 | 2 | + |
| exon-exon | SMG1P1 | 16 | + | NPIPB5 | 16 | + |
| intron-exon | CCDC200 | 17 | - | DNMT1 | 19 | - |
| exon-exon | RNU4-2 | 12 | - | SCUBE2 | 11 | - |
| exon-exon | H2BC8 | 6 | - | CRMP1 | 4 | - |
| exon-intron | ANKRD36C | 2 | - | LINC00342 | 2 | - |
| exon-intron | YPEL4 | 11 | + | CLP1 | 11 | + |
| exon-exon | NEUROD6 | 7 | - | PRKACB | 1 | + |
| exon-exon | RITA1 | 12 | + | TRAFD1 | 12 | + |
| intron-exon | SNHG18 | 5 | + | RAD21 | 8 | - |
| intron-exon | ZC3H7A | 16 | - | PLCB4 | 20 | + |
| intron-exon | LOC105371814 | 17 | + | UBE2Z | 17 | + |
| exon-intron | DHRS4L2 | 14 | + | DHRS4L1 | 14 | + |
| intron-exon | SEC22B4P | 1 | + | PCDHB18P | 5 | + |
| intron-exon | GTF2H3 | 12 | - | NELL2 | 12 | - |
| exon-exon | RNA45SN2 | 21 | + | UBE2D3 | 4 | - |
| exon-intron | LOC105373581 | 2 | - | STEAP3 | 2 | - |
| exon-exon | EEF1A1P5 | 9 | + | LIMCH1 | 4 | + |
| exon-exon | GAPDH | 12 | + | FAM3C2 | X | + |
| exon-exon | RNASE1 | 14 | - | KCTD12 | 13 | - |
| exon-exon | EIF4E2 | 2 | + | CREBBP | 16 | - |
| exon-exon | ZEB2 | 2 | - | GPD1L | 3 | + |
| intron-exon | SNRPE | 1 | + | SETBP1 | 18 | + |
| exon-exon | RNU6-1 | 15 | - | MPZL1 | 1 | + |
| exon-exon | SIRT4 | 12 | - | COQ8A | 1 | + |
| exon-exon | RNU1-2 | 1 | + | RTN3 | 11 | + |
| exon-exon | NAP1L1 | 12 | - | NSD2 | 4 | + |
| exon-intron | RPL35A | 3 | + | BPTF | 17 | + |
| intron-exon | RNR2 | MT | + | WDR82 | 3 | - |
| exon-exon | ARIH1 | 15 | + | OLFM1 | 9 | + |
| intron-exon | RNU1-27P | 14 | + | HSP90AB1 | 6 | + |
| exon-exon | RN7SK | 6 | + | UQCC1 | 20 | - |
| intron-exon | LOC107985736 | 1 | - | RAN | 12 | + |
| exon-exon | RUNX1T1 | 8 | - | TSPAN18 | 11 | + |
| intron-exon | LOC116309125 | 21 | + | P4HA1 | 10 | - |
| exon-exon | RNA45SN1 | 21 | + | FAM107B | 10 | - |
| exon-exon | NSG1 | 4 | + | ENC1 | 5 | - |
| exon-exon | ZNF775 | 7 | + | LOC728743 | 7 | + |
| exon-exon | SERF2-C15ORF63 | 15 | + | DPYSL3 | 5 | - |
| intron-exon | RNA18SP5 | 21 | + | WDR6 | 3 | + |
| exon-exon | RNPS1 | 16 | - | ZEB2 | 2 | - |
| exon-exon | FTH1 | 11 | - | NONO | X | + |
| intron-exon | RPL4 | 15 | - | HS6ST3 | 13 | + |
| intron-exon | RNU6-33P | 4 | - | TAF1C | 16 | - |
| intron-exon | LOC112997560 | 5 | - | BRD8 | 5 | - |
| exon-exon | RNA45SN2 | 21 | + | TMEM231 | 16 | - |
| exon-exon | THAP12 | 11 | - | SNRK | 3 | + |
| exon-exon | HBA1 | 16 | + | WDR82 | 3 | - |
| exon-exon | ASPHD1 | 16 | + | TPM3 | 1 | - |
| exon-exon | RAB6B | 3 | - | SATB1 | 3 | - |
| exon-exon | TMEM139-AS1 | 7 | - | DENND6A | 3 | - |
| exon-exon | BEX4 | X | + | FAM13A | 4 | - |
| intron-exon | RNU5A-1 | 15 | + | THUMPD1 | 16 | - |
| exon-exon | SNHG29 | 17 | + | SCRN1 | 7 | - |
| exon-exon | TSPAN18 | 11 | + | TMEM151B | 6 | + |
| exon-exon | H2BC5 | 6 | + | LRRC27 | 10 | + |
| intron-exon | SNX5 | 20 | - | SLC35C2 | 20 | - |
| exon-exon | EED | 11 | + | SRSF4 | 1 | - |
| exon-exon | MGAT4C | 12 | - | NREP | 5 | - |
| exon-exon | CD24 | 6 | - | NUDT3 | 6 | - |
| intron-exon | SNHG1 | 11 | - | FEZ1 | 11 | - |
| exon-exon | RN7SK | 6 | + | DUSP4 | 8 | - |
| exon-exon | RPS17 | 15 | - | ABI2 | 2 | + |
| exon-exon | ZNF181 | 19 | + | SLC12A6 | 15 | - |
| intron-exon | HERC3 | 4 | - | DPP6 | 7 | + |
| exon-exon | DBI | 2 | + | CRTC3 | 15 | + |
| exon-exon | RNU6ATAC | 9 | - | LINC01278 | X | - |
| exon-exon | RNA45SN3 | 21 | + | TMEM179 | 14 | - |
| intron-exon | RNR1 | MT | + | ASAH1 | 8 | - |
| exon-exon | ZNRD1ASP | 6 | - | HLA-K | 6 | - |
| exon-exon | UBAP2 | 9 | - | UBAP1 | 9 | + |
| exon-exon | SNORD3A | 17 | + | PRKCZ | 1 | + |
| intron-exon | RF00003 | 1 | - | SV2A | 1 | - |
| intron-exon | ZNF443 | 19 | - | ZNF799 | 19 | - |
| exon-exon | RABGGTB | 1 | + | SLC44A5 | 1 | - |
| exon-exon | FAM171A2 | 17 | - | ARID1A | 1 | + |
| exon-exon | RPL37 | 5 | - | ATP6 | MT | + |
| intron-exon | RPL38 | 17 | + | HSP90AA1 | 14 | - |
| exon-exon | MZF1-AS1 | 19 | + | CENPBD1P1 | 19 | + |
| exon-exon | NOLC1 | 10 | + | ZDHHC22 | 14 | - |
| exon-exon | H2AC12 | 6 | + | DKK3 | 11 | - |
| exon-exon | BAZ2B | 2 | - | FAP | 2 | - |
| exon-exon | PIGBOS1 | 15 | - | RAB27A | 15 | - |
| exon-exon | ZNF736 | 7 | + | RTN3 | 11 | + |
| exon-exon | RPS3A | 4 | + | CDR1 | X | + |
| exon-exon | SUSD6 | 14 | + | FAM131B | 7 | - |
| exon-exon | RNU1-4 | 1 | + | CCNH | 5 | - |
| exon-exon | FAM27B | 9 | - | ZGPAT | 20 | + |
| intron-exon | LOC107986560 | 6 | + | SEC24B | 4 | + |
| exon-exon | MACO1 | 1 | + | CUL1 | 7 | + |
| exon-exon | TMEM107 | 17 | - | SLC35A2 | X | - |
| exon-intron | LOC105371310 | 16 | + | AC092131.1 | 16 | + |
| exon-exon | RNA45SN3 | 21 | + | MARCHF5 | 10 | + |
| exon-intron | PPIAP14 | 18 | - | RP11-172F10.1 | 18 | - |
| intron-exon | AC020930.1 | 5 | - | CALN1 | 7 | - |
| exon-exon | RNU12 | 22 | + | TRO | X | + |
| intron-exon | NOP56 | 20 | + | SLC44A2 | 19 | + |
| intron-exon | RNA18SP5 | 21 | + | TNPO2 | 19 | - |
| exon-exon | WDR74 | 11 | - | INTS7 | 1 | - |
| exon-exon | SVIL-AS1 | 10 | + | SVIL | 10 | + |
| exon-exon | WDR74 | 11 | - | LRRN3 | 7 | + |
| exon-exon | WDR74 | 11 | - | GALC | 14 | - |
| exon-exon | SRP14 | 15 | - | YTHDF3 | 8 | + |
| exon-exon | RNU6-2 | 19 | + | NELL2 | 12 | - |
| exon-exon | SUGT1P1 | 9 | - | NOL6 | 9 | - |
| exon-exon | TYSND1 | 10 | - | AIFM2 | 10 | - |
| exon-exon | RNA45SN3 | 21 | + | RAF1 | 3 | - |
| intron-exon | LOC101928669 | 3 | + | ZSWIM8 | 10 | + |
| exon-exon | FAM126A | 7 | - | TRO | X | + |
| exon-exon | RNU6-3P | X | - | KIDINS220 | 2 | - |
| exon-exon | MORC2 | 22 | - | LOC107985544 | 22 | - |
| exon-intron | GPR89B | 1 | + | PDZK1P1 | 1 | + |
| exon-exon | PCBP1 | 2 | - | PCBP1-AS1 | 2 | - |
| intron-exon | MYCNOS | 2 | - | MYCNUT | 2 | - |
| exon-exon | AKAP9 | 7 | + | CDK14 | 7 | + |
| intron-exon | LOC107985736 | 1 | - | ZNF324 | 19 | + |
| exon-exon | LMNA | 1 | + | MRAS | 3 | + |
| exon-exon | TMCC2 | 1 | - | TMCC2 | 1 | + |
| exon-exon | DCAF16 | 4 | - | FAM184B | 4 | - |
| exon-exon | AP5S1 | 20 | + | MAVS | 20 | + |
| intron-exon | LOC105370449 | 14 | - | PIGG | 4 | + |
| exon-exon | NPHP1 | 2 | - | PARG | 10 | - |
| intron-exon | TIAM1 | 21 | - | KIAA0319L | 1 | - |
| intron-exon | LOC105370449 | 14 | - | DDX5 | 17 | - |
| exon-intron | SNORD3B-1 | 17 | + | SP3 | 2 | - |
| exon-exon | PTGDS | 9 | + | ZNF875 | 19 | + |
| exon-exon | PAPSS1 | 4 | - | RAB13 | 1 | - |
| intron-exon | RNR1 | MT | + | TEAD1 | 11 | + |
| exon-exon | SNX12 | X | - | MMP2 | 16 | + |
| exon-exon | TM9SF4 | 20 | + | TUBA4A | 2 | - |
| exon-exon | ACTB | 7 | - | GTF2I | 7 | + |
| intron-exon | SAMD11 | 1 | - | LOC107985728 | 1 | - |
| intron-exon | LOC101927533 | 2 | + | KRT18P33 | 2 | + |
| exon-exon | XIST | X | - | COPB2 | 3 | - |
| exon-exon | EIF3F | 11 | + | RNA45SN3 | 21 | + |
| exon-exon | RNA45SN3 | 21 | + | GOT2 | 16 | - |
| exon-exon | YBX3 | 12 | - | RNA45SN1 | 21 | + |
| exon-exon | RNA45SN1 | 21 | + | LSR | 19 | + |
| exon-exon | RNA45SN2 | 21 | + | BSG | 19 | + |
| exon-exon | AMY2A | 1 | + | AMY1A | 1 | + |
| exon-exon | LOC100129917 | 4 | - | FGD5-AS1 | 3 | - |
| intron-exon | GOLGA5 | 14 | - | SUPT16H | 14 | - |
| exon-exon | CTCF | 16 | + | PRMT7 | 16 | + |
| exon-exon | RNA45SN3 | 21 | + | CDIPT | 16 | - |
| exon-exon | ZNF141 | 4 | + | NUP98 | 11 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| exon-intron | CALM3 | 19 | + | RNR2 | MT | + |
| exon-exon | ARHGAP24 | 4 | + | BANK1 | 4 | + |
| exon-exon | RNA45SN1 | 21 | + | GRN | 17 | + |
| exon-exon | LOC374443 | 12 | + | CLEC2D | 12 | + |
| intron-exon | IGH | 14 | - | IGHG3 | 14 | - |
| intron-exon | RNR2 | MT | + | MORF4L1 | 15 | + |
| exon-exon | PHB2 | 12 | - | FHL1 | X | + |
| exon-exon | SIRT4 | 12 | - | SPARCL1 | 4 | - |
| exon-exon | LSP1P4 | 2 | - | ZFP91-CNTF | 11 | + |
| exon-exon | UNC45B | 17 | + | LOC100130114 | 17 | + |
| intron-exon | RNR2 | MT | + | UBC | 12 | - |
| exon-exon | WDR74 | 11 | - | F11R | 1 | - |
| exon-exon | PRKAB2 | 1 | - | COP1 | 1 | - |
| exon-intron | LOC101929295 | 11 | + | SESN3 | 11 | + |
| exon-intron | IDH2 | 15 | - | ZNF710-AS1 | 15 | - |
| intron-exon | PGD | 1 | - | KIF1B | 1 | - |
| exon-exon | RNU5B-1 | 15 | + | LAS1L | X | - |
| exon-exon | RNA45SN3 | 21 | + | DES | 2 | + |
| intron-exon | ARL15 | 5 | - | CA3 | 8 | + |
| exon-exon | RNVU1-18 | 1 | - | PYGM | 11 | - |
| exon-exon | COX1 | MT | + | ZFP36L2 | 2 | - |
| exon-intron | PRRX1 | 1 | + | BX284613.2 | 1 | + |
| exon-exon | RBM10 | X | + | CTC1 | 17 | - |
| intron-exon | LOC107985736 | 1 | - | CAV1 | 7 | + |
| exon-exon | LOC107984969 | 17 | + | SLC43A2 | 17 | - |
| exon-exon | HLA-B | 6 | - | HLA-C | 6 | - |
| exon-exon | RNVU1-7 | 1 | - | PSG1 | 19 | - |
| intron-exon | RNU1-27P | 14 | + | PLAC4 | 21 | - |
| exon-exon | RNA45SN1 | 21 | + | PSG5 | 19 | - |
| exon-exon | RPS15A | 16 | - | H19 | 11 | - |
| exon-exon | NAA60 | 16 | + | CLUAP1 | 16 | + |
| exon-intron | PSG4 | 19 | - | PSG10P | 19 | - |
| exon-intron | C6orf62 | 6 | - | ACOT13 | 6 | - |
| exon-exon | RNA45SN2 | 21 | + | FRZB | 2 | - |
| intron-exon | ARL8B | 3 | + | PSG1 | 19 | - |
| exon-exon | DAG1 | 3 | + | APP | 21 | - |
| exon-exon | YLPM1 | 14 | + | MAGEA8 | X | + |
| exon-exon | PSG1 | 19 | - | PSG8 | 19 | - |
| exon-exon | RNA45SN1 | 21 | + | SERPINE2 | 2 | - |
| exon-intron | MORF4L2 | X | - | LOC100130176 | X | - |
| exon-intron | LOC154761 | 7 | - | TCAF2 | 7 | - |
| exon-exon | FNDC3A | 13 | + | PSG3 | 19 | - |
| exon-exon | RNU2-1 | 17 | - | FANCL | 2 | - |
| intron-exon | AL353151.2 | 9 | - | AK3 | 9 | - |
| exon-intron | PSG4 | 19 | - | PSG11 | 19 | - |
| exon-exon | RNA45SN3 | 21 | + | PALLD | 4 | + |
| exon-exon | RNA45SN1 | 21 | + | TTC7A | 2 | + |
| exon-exon | PXDC1 | 6 | - | LOC100507336 | 6 | - |
| intron-exon | TEAD1 | 11 | + | WASF2 | 1 | - |
| exon-exon | APOL2 | 22 | - | DEPDC5 | 22 | + |
| intron-exon | IGH | 14 | - | IGHG4 | 14 | - |
| exon-exon | PLCXD1 | Y | + | GTPBP6 | Y | + |
| intron-exon | PKN2 | 1 | + | PSG4 | 19 | - |
| intron-exon | ANP32E | 1 | - | PRKCSH | 19 | + |
| exon-exon | RNA45SN2 | 21 | + | GPNMB | 7 | + |
| intron-exon | AL590560.5 | 1 | - | CFAP45 | 1 | - |
| exon-exon | RASAL2 | 1 | + | SARDH | 9 | - |
| intron-exon | ELMO1 | 7 | + | ELMO1 | 7 | - |
| exon-exon | PAPPA | 9 | + | PSG3 | 19 | - |
| intron-exon | LINC02404 | 12 | + | KPNA4 | 3 | - |
| exon-intron | EPAS1 | 2 | + | HNRNPA2B1 | 7 | - |
| exon-intron | ODAPH | 4 | - | THAP6 | 4 | - |
| exon-exon | MBNL3 | X | - | CCND1 | 11 | + |
| exon-exon | RASGRF1 | 15 | - | HNRNPD | 4 | - |
| exon-intron | RNA45SN1 | 21 | + | RRP1 | 21 | + |
| intron-exon | RNA18SP5 | 21 | + | GPC3 | X | - |
| exon-exon | RNA45SN3 | 21 | + | RAP1B | 12 | + |
| exon-intron | LOC105370361 | 13 | + | AL390755.1 | 13 | + |
| exon-exon | RNA45SN3 | 21 | + | CD59 | 11 | - |
| exon-exon | PUM2 | 2 | - | STAT2 | 12 | - |
| exon-exon | LOC107985875 | 2 | + | CHORDC1P1 | 2 | + |
| intron-exon | RP11-434D9.2 | 5 | - | LOC105379005 | 5 | - |
| intron-exon | UBTD1 | 10 | - | MMS19 | 10 | - |
| exon-exon | RABGEF1 | 7 | + | GNB1 | 1 | - |
| exon-intron | PEG10 | 7 | + | ANKDD1A | 15 | - |
| exon-exon | NCOA3 | 20 | + | ZMYND8 | 20 | - |
| exon-exon | MIR3610 | 8 | - | RAD21 | 8 | - |
| intron-exon | ADAM12 | 10 | - | RNA45SN2 | 21 | + |
| intron-exon | ZZZ3 | 1 | - | PTPRB | 12 | - |
| intron-exon | CR589904.2 | 1 | - | AHCYP8 | 1 | - |
| intron-exon | LINC02000 | 3 | - | C3orf36 | 3 | - |
| exon-intron | IFIT3 | 10 | + | LIPA | 10 | + |
| exon-intron | CDK10 | 16 | + | LINC02166 | 16 | + |
| exon-exon | RNU6-1 | 15 | - | WASL | 7 | - |
| exon-exon | SIRT4 | 12 | - | ENPEP | 4 | + |
| exon-exon | MYOPARR | 1 | + | ADORA1 | 1 | + |
| intron-exon | SCARA5 | 8 | - | SHC1 | 1 | - |
| exon-exon | AFF1 | 4 | + | ADAM12 | 10 | - |
| exon-exon | TMED2 | 12 | + | PARM1 | 4 | + |
| intron-exon | DLEU7-AS1 | 13 | + | DLEU7 | 13 | + |
| exon-exon | CCDC183 | 9 | + | RABL6 | 9 | + |
| intron-exon | AL163953.3 | 14 | + | LOC112268134 | 14 | + |
| exon-exon | SRSF4 | 1 | - | TSPAN18 | 11 | + |
| exon-exon | CSH2 | 17 | - | CALD1 | 7 | + |
| intron-exon | AL110292.1 | 14 | + | LOC105370420 | 14 | + |
| exon-intron | RNU6-7 | 14 | + | PRPF4B | 6 | + |
| intron-exon | ADCY10 | 1 | + | DCAF6 | 1 | + |
| exon-exon | BET1-AS1 | 7 | + | LOC107986820 | 7 | + |
| exon-intron | MRPL20 | 1 | - | MRPL20-AS1 | 1 | - |
| exon-exon | RN7SK | 6 | + | FN1 | 2 | - |
| exon-intron | RN7SK | 6 | + | JAK2 | 9 | + |
| intron-exon | POLK | 5 | + | NPIPB3 | 16 | - |
| exon-exon | HNRNPH3 | 10 | + | ND4L | MT | + |
| intron-exon | YWHAB | 20 | + | SEMG2 | 20 | + |
| exon-intron | ZNF630 | X | + | AC244636.3 | X | + |
| exon-exon | ND3 | MT | + | SERINC3 | 20 | - |
| exon-exon | RNA45SN3 | 21 | + | APH1A | 1 | - |
| exon-exon | MALAT1 | 11 | + | TPP1 | 11 | - |
| intron-exon | RPL7A | 9 | + | ST7 | 7 | + |
| intron-exon | CCDC200 | 17 | - | FAM153A | 5 | - |
| intron-exon | RP11-324E6.6 | 12 | - | HCAR2 | 12 | - |
| exon-exon | HMGA1 | 6 | + | RNA45SN3 | 21 | + |
| intron-exon | DDB1 | 11 | - | ZNF408 | 11 | + |
| exon-exon | RNA45SN3 | 21 | + | DES | 2 | + |
| exon-intron | LOC101929710 | 5 | + | CAST | 5 | + |
| exon-exon | C17orf80 | 17 | - | FAM104A | 17 | - |
| exon-exon | RNA45SN2 | 21 | + | LMNA | 1 | + |
| exon-exon | PCBP1 | 2 | - | PCBP1-AS1 | 2 | - |
| intron-exon | SGCD | 5 | + | UPF3B | X | - |
| intron-exon | RNR1 | MT | + | SSX2IP | 1 | - |
| exon-exon | RNA45SN1 | 21 | + | LPCAT3 | 12 | - |
| intron-exon | RNA18SP5 | 21 | + | PRORP | 14 | + |
| exon-exon | REPIN1 | 7 | + | LINC01000 | 7 | + |
| exon-exon | SLC38A7 | 16 | - | GOT2 | 16 | - |
| exon-exon | KLK3 | 19 | + | CDC42EP4 | 17 | - |
| exon-exon | ABCC10 | 6 | + | CUL9 | 6 | + |
| intron-exon | KIF16B | 20 | - | ABHD2 | 15 | + |
| intron-exon | LOC102724001 | 15 | - | LOC102723985 | 15 | - |
| exon-exon | TMEM33 | 4 | + | EIF3L | 22 | + |
| intron-exon | GLUD1P3 | 10 | - | BMS1P4-AGAP5 | 10 | - |
| exon-exon | RNA45SN1 | 21 | + | VIPR1 | 3 | + |
| exon-intron | RNA45SN3 | 21 | + | COL6A2 | 21 | + |
| exon-exon | RNA45SN2 | 21 | + | ACTB | 7 | - |
| exon-exon | RNU1-1 | 1 | - | KLK3 | 19 | + |
| intron-exon | CCDC86 | 11 | - | LOC105369322 | 11 | - |
| intron-exon | SEC22B4P | 1 | + | RPL22 | 1 | - |
| intron-exon | ANKRD36C | 2 | - | SEMG2 | 20 | + |
| intron-exon | RNA18SP5 | 21 | + | UBC | 12 | - |
| exon-exon | OSGEP | 14 | - | SELENBP1 | 1 | - |
| exon-exon | NFX1 | 9 | + | ZKSCAN1 | 7 | + |
| intron-exon | LOC107985885 | 2 | - | PPP4R3B | 2 | - |
| exon-intron | ZNRF2P1 | 7 | - | DPY19L1P1 | 7 | - |
| exon-exon | RNA45SN3 | 21 | + | PBX1 | 1 | + |
| exon-exon | UBA52 | 19 | + | FYN | 6 | - |
| exon-exon | HHIP | 4 | + | DDX46 | 5 | + |
| exon-intron | ZNF586 | 19 | + | ZNF552 | 19 | + |
| intron-exon | CCDC200 | 17 | - | SP100 | 2 | + |
| intron-exon | RNR2 | MT | + | LEPROTL1 | 8 | + |
| exon-exon | CARD8 | 19 | - | RPA1 | 17 | + |
| intron-exon | RNA5-8SP10 | 21 | + | RGS4 | 1 | + |
| intron-exon | RF00003 | 1 | - | TARDBP | 1 | + |
| intron-exon | SLC41A1 | 1 | + | LOC284581 | 1 | + |
| intron-exon | LOC105375463 | 7 | - | LOC102724434 | 7 | - |
| exon-exon | RNVU1-6 | 1 | - | HMGA1 | 6 | + |
| exon-intron | APC | 5 | + | CTC-554D6.1 | 5 | + |
| exon-exon | ACTB | 7 | - | ACO2 | 22 | + |
| exon-exon | WDR74 | 11 | - | EEF1A1 | 6 | - |
| exon-exon | LDB3 | 10 | + | GABARAPL1 | 12 | + |
| exon-exon | E2F8 | 11 | - | ZNF638 | 2 | + |
| exon-exon | TNNC2 | 20 | - | HSPB1 | 7 | + |
| exon-exon | RNU1-1 | 1 | - | ENDOG | 9 | + |
| exon-exon | IGHV1-3 | 14 | - | IGHG1 | 14 | - |
| intron-exon | PTP4A3 | 8 | - | LOC105375790 | 8 | - |
| exon-exon | SIRT2 | 19 | - | TRIM63 | 1 | - |
| exon-exon | TCAP | 17 | + | CYTB | MT | + |
| exon-exon | ACTA1 | 1 | - | H19 | 11 | - |
| exon-exon | LINC01634 | 22 | + | MYOM2 | 8 | + |
| exon-exon | MB | 22 | - | PSRC1 | 1 | - |
| exon-exon | RNA45SN2 | 21 | + | PCIF1 | 20 | + |
| intron-exon | RNR2 | MT | + | UBE2D3 | 4 | - |
| exon-intron | RNU6-9 | 19 | + | PSMD13 | 11 | + |
| exon-exon | RNA45SN1 | 21 | + | PSMA7 | 20 | - |
| intron-exon | LOC107985126 | 18 | - | LOC105372038 | 18 | - |
| exon-exon | PTCH2 | 1 | - | CLN5 | 13 | + |
| intron-exon | RNU5D-1 | 1 | - | BAK1 | 6 | - |
| intron-exon | SOX2-OT | 3 | + | ENG | 9 | - |
| exon-exon | RNA45SN2 | 21 | + | SLC5A6 | 2 | - |
| intron-exon | CCDC200 | 17 | - | UTP4 | 16 | + |
| intron-exon | CCDC200 | 17 | - | PYCR1 | 17 | - |
| exon-exon | SIRT4 | 12 | - | EEF1A1P5 | 9 | + |
| intron-exon | LOC106799848 | 14 | + | HSPA8 | 11 | - |
| exon-exon | H2AZ1 | 4 | - | CSDE1 | 1 | - |
| exon-exon | RCC1 | 1 | + | WARS1 | 14 | - |
| intron-exon | AC009435.1 | 8 | - | LOC105377797 | 8 | - |
| exon-exon | RNU1-2 | 1 | + | SMG9 | 19 | - |
| exon-exon | SNHG29 | 17 | + | MEIS1 | 2 | + |
| exon-exon | RNA45SN1 | 21 | + | SLC7A7 | 14 | - |
| exon-exon | BTRC | 10 | + | GLUD1 | 10 | - |
| exon-exon | CXorf38 | X | - | ACAA2 | 18 | - |
| exon-exon | RNU1-1 | 1 | - | ACTB | 7 | - |
| exon-exon | NBR2 | 17 | + | ATP6V0A1 | 17 | + |
| exon-intron | LOC105370893 | 15 | - | CCDC33 | 15 | - |
| exon-exon | GABPB2 | 1 | + | TAF11 | 6 | - |
| intron-exon | AF131217.1 | 21 | + | LOC105372764 | 21 | + |
| intron-exon | HLX-AS1 | 1 | + | HLX | 1 | + |
| intron-exon | AC012254.2 | 18 | - | HDHD2 | 18 | - |
| intron-exon | RNU5D-1 | 1 | - | EEF1A1P6 | 7 | - |
| intron-exon | TRNN | MT | - | FSD1 | 19 | + |
| exon-exon | HCN3 | 1 | - | CLK2 | 1 | - |
| exon-intron | LINC02249 | 15 | + | AC139426.3 | 15 | - |
| intron-exon | HLX-AS1 | 1 | + | HLX | 1 | + |
| exon-exon | RNA45SN1 | 21 | + | ARHGEF16 | 1 | + |
| exon-exon | CARD8 | 19 | + | EXD3 | 9 | - |
| intron-exon | AL589843.1 | 9 | + | LOC441455 | 9 | + |
| exon-exon | NCOA7 | 6 | + | L3MBTL3 | 6 | + |
| exon-exon | RNVU1-18 | 1 | - | HSPA8 | 11 | - |
| exon-exon | RNU1-2 | 1 | + | NSUN5P2 | 7 | - |
| exon-intron | LOC107986838 | 7 | - | TES | 7 | - |
| exon-exon | FUBP3 | 9 | + | HERPUD1 | 16 | + |
| exon-intron | IGLV1-47 | 22 | + | IGL | 22 | + |
| exon-exon | RNA45SN1 | 21 | + | ANXA11 | 10 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| exon-intron | LINC00578 | 3 | + | CPXM2 | 10 | - |
| exon-exon | RNA45SN1 | 21 | + | NXF1 | 11 | - |
| exon-exon | PPIA | 7 | + | RNF135 | 17 | + |
| exon-exon | MARCHF6 | 5 | + | HSPA9 | 5 | - |
| exon-exon | AFG3L1P | 16 | + | LMF1 | 16 | - |
| exon-exon | JCHAIN | 4 | - | MCM7 | 7 | - |
| intron-exon | HIPK1 | 1 | + | RPL28 | 19 | + |
| exon-exon | ALDH7A1 | 5 | - | EEF1A1P5 | 9 | + |
| intron-exon | ANKRD54 | 22 | + | EIF3L | 22 | + |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| exon-exon | IGKV2-30 | 2 | - | IGKC | 2 | - |
| exon-exon | RNA45SN2 | 21 | + | CNN1 | 19 | + |
| exon-exon | RNA45SN1 | 21 | + | ACTB | 7 | - |
| exon-exon | SNTB2 | 16 | + | CTDSP1 | 2 | + |
| exon-exon | RBCK1 | 20 | + | DES | 2 | + |
| intron-exon | IGH | 14 | - | IGHA2 | 14 | - |
| exon-exon | RNA45SN2 | 21 | + | XKR8 | 1 | + |
| intron-exon | PGM5P3-AS1 | 9 | - | WASHC1 | 9 | - |
| exon-exon | PSENEN | 19 | + | PDLIM7 | 5 | - |
| exon-intron | IGLV2-14 | 22 | + | IGL | 22 | + |
| exon-exon | RNA45SN1 | 21 | + | CNBP | 3 | - |
| exon-exon | RNA45SN3 | 21 | + | SERPING1 | 11 | + |
| exon-intron | VPREB3 | 22 | - | CSF1R | 5 | - |
| exon-exon | RPL13A | 19 | + | COBLL1 | 2 | - |
| exon-exon | RNA45SN2 | 21 | + | MRC2 | 17 | + |
| exon-exon | LOC105370982 | 15 | + | LOC107983974 | 15 | + |
| exon-exon | BTN3A3 | 6 | + | BTN2A1 | 6 | + |
| exon-exon | RNA5S7 | 1 | - | PABPC1 | 8 | - |
| intron-exon | ARHGAP15 | 2 | + | LILRB2 | 19 | - |
| exon-exon | RBM10 | X | + | WWP2 | 16 | + |
| intron-exon | IGH | 14 | - | IGHV4-30-2 | 14 | - |
| exon-exon | RNVU1-18 | 1 | - | SNX17 | 2 | + |
| exon-intron | IGHV1-69 | 14 | - | IGH | 14 | - |
| intron-exon | LOC105369827 | 12 | + | PTPRB | 12 | + |
| intron-exon | IGH | 14 | - | IGHV1-69D | 14 | - |
| intron-exon | AL512353.1 | 1 | - | ERMAP | 1 | - |
| exon-exon | RNU1-1 | 1 | - | RSRP1 | 1 | - |
| intron-exon | PRTFDC1 | 10 | + | THNSL1 | 10 | + |
| exon-intron | PCED1B-AS1 | 12 | - | PCED1B | 12 | - |
| intron-exon | LOC112267855 | 5 | - | APBB3 | 5 | - |
| intron-exon | CGGBP1 | 3 | + | C3orf38 | 3 | + |
| exon-intron | ZNF433-AS1 | 19 | + | AL078604.4 | 6 | - |
| exon-exon | ARHGDIB | 12 | - | JAML | 11 | - |
| exon-exon | MCL1 | 1 | - | APLNR | 11 | - |
| exon-intron | HBB | 11 | - | ZMIZ2 | 7 | + |
| exon-intron | RPRD2 | 1 | + | MEF2C | 5 | - |
| exon-exon | RNA45SN3 | 21 | + | RNF26 | 11 | + |
| exon-exon | NDUFS6 | 5 | + | GGA2 | 16 | - |
| exon-intron | EIF3H | 8 | - | CMC1 | 3 | + |
| exon-exon | LOC101926933 | 14 | + | HAUS4 | 14 | + |
| intron-exon | GAS5 | 1 | - | ENG | 9 | - |
| exon-exon | PSMD6 | 3 | - | EIF3A | 10 | - |
| exon-exon | ARMCX4 | X | + | ARMCX1 | X | + |
| exon-exon | RNU1-1 | 1 | - | CD4 | 12 | + |
| exon-intron | SLC25A32 | 8 | + | DCAF13 | 8 | + |
| exon-intron | FGD2 | 6 | + | CD74 | 5 | - |
| intron-exon | RUNX1 | 21 | - | VAV1 | 19 | + |
| exon-exon | EED | 11 | + | AOAH | 7 | - |
| exon-exon | ZNF781 | 19 | - | ZFP30 | 19 | - |
| exon-exon | RPL27AP6 | 6 | - | DENND2B | 11 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-intron | LOC105373785 | 2 | - | LINC01473 | 2 | - |
| intron-exon | SNHG5 | 6 | - | HEY1 | 8 | - |
| exon-exon | RAB5A | 3 | + | PRKAB2 | 1 | - |
| exon-exon | ZNF814 | 19 | - | UBE2CP5 | 19 | - |
| exon-intron | TMEM255B | 13 | + | GAS6-AS1 | 13 | + |
| intron-exon | EOLA1 | X | - | LINC00893 | X | - |
| exon-intron | PTGER4P2-CDK2AP2P2 | 9 | + | LERFS | 9 | + |
| exon-exon | LINC00840 | 10 | + | LINC00841 | 10 | + |
| exon-intron | HLA-DPB2 | 6 | + | LOC105375021 | 6 | + |
| exon-exon | ZNF79 | 9 | + | EVL | 14 | + |
| intron-exon | RNA5-8SP10 | 21 | + | SEPHS2 | 16 | - |
| exon-exon | RNA45SN2 | 21 | + | GHITM | 10 | + |
| exon-intron | SCNN1A | 12 | - | TNFRSF1A | 12 | - |
| exon-exon | RNVU1-18 | 1 | - | TROAP | 12 | + |
| exon-intron | RN7SK | 6 | + | EEF1A1P5 | 9 | + |
| exon-exon | TNFSF10 | 3 | - | TNFRSF13C | 22 | + |
| exon-exon | KDM2A | 11 | + | TMEM71 | 8 | - |
| exon-exon | RSU1 | 10 | - | RNF10 | 12 | + |
| intron-exon | PAICSP1 | 9 | - | PLEKHM1 | 17 | - |
| exon-exon | RNA45SN3 | 21 | + | CD8A | 2 | - |
| exon-exon | VASH1 | 14 | + | PRKCH | 14 | + |
| exon-exon | ATP5MD | 10 | - | NCL | 2 | - |
| exon-intron | SENP3-EIF4A1 | 17 | + | CNTROB | 17 | + |
| intron-exon | SKAP2 | 7 | - | LOC101928077 | 7 | - |
| intron-exon | SOX2-OT | 3 | + | LUC7L | 16 | - |
| exon-exon | TRBJ1-5 | 7 | + | TRBC1 | 7 | + |
| intron-exon | IGH | 14 | - | IGHV3-49 | 14 | - |
| exon-intron | RNA45SN3 | 21 | + | SLCO2A1 | 3 | - |
| exon-intron | FTL | 19 | + | TCF7L2 | 10 | + |
| exon-intron | ZNF626 | 19 | - | AC010636.2 | 19 | - |
| intron-exon | RP11-176N18.2 | 18 | + | LOC107985172 | 18 | + |
| exon-exon | RNA45SN1 | 21 | + | UBC | 12 | - |
| intron-exon | CRIPAK | 4 | + | UVSSA | 4 | + |
| exon-intron | STX4 | 16 | + | LOC101928762 | 16 | + |
| exon-intron | IGLV1-44 | 22 | + | IGL | 22 | + |
| exon-exon | RNA45SN1 | 21 | + | RBM5 | 3 | + |
| exon-intron | RNVU1-18 | 1 | - | AFTPH | 2 | + |
| exon-exon | TMSB4X | X | + | ARHGAP4 | X | - |
| exon-intron | CTB-30L5.1 | 7 | - | AC004917.1 | 7 | - |
| intron-exon | RNR2 | MT | + | SLC25A3 | 12 | + |
| intron-exon | IGH | 14 | - | IGHV3-66 | 14 | - |
| intron-exon | ZDHHC14 | 6 | + | PDE7A | 8 | - |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| exon-intron | RNU6-2 | 19 | + | TBRG4 | 7 | - |
| intron-exon | TRA | 14 | + | TRAV19 | 14 | + |
| intron-exon | IGHV3-16 | 14 | - | IGHV3-11 | 14 | - |
| exon-exon | LIPF | 10 | + | PGA3 | 11 | + |
| exon-intron | RNA45SN1 | 21 | + | IGH | 14 | - |
| intron-exon | RNVU1-27 | 1 | + | STAU2 | 8 | - |
| exon-exon | CD74 | 5 | - | LOC102724971 | 15 | - |
| exon-exon | PHF20L1 | 8 | + | PGA5 | 11 | + |
| exon-exon | MOB2 | 11 | - | NONO | X | + |
| exon-exon | RNA45SN3 | 21 | + | LIPF | 10 | + |
| exon-exon | RNA45SN3 | 21 | + | PGA3 | 11 | + |
| intron-exon | C1orf112 | 1 | - | SELP | 1 | - |
| exon-exon | IGHV4-39 | 14 | - | IGHV4-4 | 14 | - |
| exon-intron | IGLV1-44 | 22 | + | IGL | 22 | + |
| exon-exon | RNU1-4 | 1 | + | TGFBR2 | 3 | + |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-33 | 14 | - |
| exon-exon | TNFRSF10A | 8 | + | LOC389641 | 8 | + |
| exon-exon | IGHV1-2 | 14 | - | IGHG1 | 14 | - |
| exon-intron | IGHV4-59 | 14 | - | IGH | 14 | - |
| exon-exon | RNA45SN2 | 21 | + | AKIRIN2 | 6 | - |
| intron-exon | IGH | 14 | - | IGHV3-33 | 14 | - |
| exon-exon | SNHG29 | 17 | + | TIMP3 | 22 | + |
| exon-exon | RNA45SN1 | 21 | + | VDAC1 | 5 | - |
| intron-exon | IGH | 14 | - | IGHV1-46 | 14 | - |
| exon-exon | RNASE1 | 14 | - | B2M | 15 | + |
| exon-exon | RNA45SN2 | 21 | + | MMP3 | 11 | - |
| exon-exon | BMS1P20 | 22 | + | IGLV1-36 | 22 | + |
| exon-intron | IGHV4-39 | 14 | - | IGH | 14 | - |
| exon-exon | CD74 | 5 | - | MMP3 | 11 | - |
| exon-intron | IGHV1-69 | 14 | - | IGH | 14 | - |
| intron-exon | HIBCH | 2 | - | SDCBP | 8 | + |
| intron-exon | IGH | 14 | - | IGHV3-53 | 14 | - |
| exon-exon | LOC107984998 | 1 | - | ADGRL4 | 1 | - |
| exon-exon | RNA45SN1 | 21 | + | CHI3L1 | 1 | - |
| exon-intron | IGLV1-47 | 22 | + | IGL | 22 | + |
| exon-exon | WDR41 | 5 | - | AP3B1 | 5 | - |
| intron-exon | IGH | 14 | - | IGHV1-24 | 14 | - |
| intron-exon | RNA5-8SP10 | 21 | + | IGHV4-30-2 | 14 | - |
| exon-intron | IGHV3-30 | 14 | - | IGH | 14 | - |
| exon-exon | H4C15 | 1 | - | RHOA | 3 | - |
| exon-exon | FKBP1A | 20 | - | SDCBP2 | 20 | - |
| exon-intron | ARL17A | 17 | - | NSFP1 | 17 | - |
| exon-exon | IGHV1-18 | 14 | - | IGHG3 | 14 | - |
| exon-intron | IGHV3-30 | 14 | - | IGH | 14 | - |
| exon-exon | SNX17 | 2 | + | TXNL4B | 16 | - |
| intron-exon | VIM-AS1 | 10 | + | VIM | 10 | + |
| intron-exon | CREB5 | 7 | + | CD74 | 5 | - |
| exon-exon | RNA45SN3 | 21 | + | IGHV3-23 | 14 | - |
| exon-intron | IGHV3-33 | 14 | - | IGH | 14 | - |
| exon-exon | IGHV1-18 | 14 | - | IGHG3 | 14 | - |
| intron-exon | SAMD9L | 7 | - | PKM | 15 | - |
| intron-exon | HLX-AS1 | 1 | + | HLX | 1 | + |
| intron-exon | IGKV1-33 | 2 | - | IGHV1-69D | 14 | - |
| exon-exon | RNA45SN2 | 21 | + | EEF1A1P5 | 9 | + |
| intron-exon | LRRC37A2 | 17 | + | LRRC37A4P | 17 | - |
| intron-exon | IGH | 14 | - | IGHV1-24 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| exon-exon | IGHV1OR15-1 | 15 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV7-4-1 | 14 | - |
| exon-intron | IGHV3-33 | 14 | - | IGH | 14 | - |
| exon-exon | RNA45SN2 | 21 | + | KIT | 4 | + |
| intron-exon | IGH | 14 | - | IGHV3-15 | 14 | - |
| exon-exon | RNA45SN1 | 21 | + | GCFC2 | 2 | + |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-46 | 14 | - |
| intron-exon | RALA | 7 | + | MMP3 | 11 | - |
| intron-exon | AL163953.3 | 14 | + | LOC112268134 | 14 | + |
| intron-exon | MAPK1 | 22 | + | CLIP2 | 7 | + |
| intron-exon | IGH | 14 | - | IGHG3 | 14 | - |
| exon-intron | LOC105377872 | 6 | - | TENT5A | 6 | - |
| intron-exon | AC091493.1 | 3 | - | DAZL | 3 | - |
| intron-exon | RNR2 | MT | - | GOLGB1 | 3 | - |
| exon-intron | NME1-NME2 | 17 | + | MBTD1 | 17 | + |
| exon-exon | INTS8 | 8 | + | ARL8B | 3 | + |
| exon-exon | RNA45SN2 | 21 | + | CAVIN1 | 17 | - |
| exon-exon | PVT1 | 8 | + | MAP4K4 | 2 | + |
| intron-exon | SNORD3B-1 | 17 | + | TIAL1 | 10 | - |
| exon-exon | RNU4-2 | 12 | - | PTPN22 | 1 | - |
| exon-exon | RNA45SN3 | 21 | + | ZBTB1 | 14 | + |
| exon-exon | RNA45SN1 | 21 | + | LOC107984270 | 10 | - |
| exon-exon | RNA45SN1 | 21 | + | LOC102723996 | 21 | + |
| intron-exon | AC126177.4 | 12 | - | AP3B1 | 5 | - |
| exon-exon | LOC101928556 | 16 | + | NPIPB2 | 16 | - |
| exon-exon | TNRC6B | 22 | + | TMEM184B | 22 | - |
| intron-exon | CCDC200 | 17 | - | HIF1A | 14 | + |
| exon-intron | IGHV3-23 | 14 | - | IGH | 14 | - |
| intron-exon | RAD51L3-RFFL | 17 | - | RAD51D | 17 | - |
| intron-exon | RP11-679C8.2 | 4 | + | ITSN1 | 21 | + |
| exon-exon | HINT1 | 5 | - | AHSA2P | 2 | + |
| intron-exon | RNR2 | MT | + | EEF1A1P5 | 9 | + |
| exon-exon | EEF2 | 19 | - | SLC25A10 | 17 | + |
| exon-intron | LOC107986140 | 3 | + | TM4SF18 | 3 | + |
| intron-exon | RPL21 | 13 | + | ELF3 | 1 | + |
| exon-exon | RNA45SN3 | 21 | + | SERPINA3 | 14 | + |
| exon-exon | RNU6-17P | 15 | - | ATP2C1 | 3 | + |
| intron-exon | SLC4A8 | 12 | - | GALNT6 | 12 | - |
| exon-exon | ZNF587B | 19 | + | ZNF587 | 19 | + |
| exon-exon | WBP2 | 17 | - | NUP85 | 17 | + |
| exon-exon | RNY5 | 7 | + | PPT1 | 1 | - |
| exon-exon | RN7SK | 6 | + | MTERF4 | 2 | - |
| exon-exon | RNU1-1 | 1 | - | EIF3L | 22 | + |
| intron-exon | AL671883.2 | 6 | - | HLA-B | 6 | - |
| intron-exon | SEC22B4P | 1 | + | H2BC21 | 1 | - |
| exon-exon | GPI | 19 | + | NFKB2 | 10 | + |
| exon-exon | SIRT4 | 12 | - | EIF4A3 | 17 | - |
| exon-intron | APP | 21 | + | AP000229.1 | 21 | + |
| intron-exon | NUMA1 | 11 | - | ITM2B | 13 | + |
| exon-exon | RNA45SN3 | 21 | + | IDH1 | 2 | - |
| intron-exon | IGH | 14 | - | IGHV3-15 | 14 | - |
| intron-exon | RNR2 | MT | + | MS4A8 | 11 | + |
| exon-exon | EEF1A1P5 | 9 | + | FOS | 14 | + |
| intron-exon | IGH | 14 | - | IGHV7-4-1 | 14 | - |
| intron-exon | LOC107985736 | 1 | - | EEF1G | 11 | - |
| intron-exon | IGH | 14 | - | IGHV3-53 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-48 | 14 | - |
| intron-exon | PAK2 | 3 | - | ARF1 | 1 | + |
| intron-exon | LOC107985772 | 2 | - | ANAPC1P2 | 2 | - |
| exon-exon | RNA45SN3 | 21 | + | KCTD17 | 22 | + |
| exon-exon | USF3 | 3 | - | USF3 | 3 | + |
| exon-exon | LMBR1 | 7 | - | PTPRN2 | 7 | - |
| exon-exon | ARL6IP6 | 2 | + | PKN1 | 19 | + |
| exon-exon | ITGB1BP1 | 2 | - | CPSF3 | 2 | + |
| intron-exon | MTND5P28 | 2 | - | EPB41L5 | 2 | - |
| exon-exon | RPL27 | 17 | + | KRT13 | 17 | - |
| exon-exon | RNU1-2 | 1 | + | CTSK | 1 | - |
| exon-exon | HLA-DPA1 | 6 | - | NEAT1 | 11 | + |
| exon-exon | RNA45SN2 | 21 | + | PERP | 6 | - |
| exon-exon | LOC105369203 | 15 | - | LOC107983974 | 15 | - |
| exon-exon | RNU5A-1 | 15 | + | CCT8 | 21 | - |
| exon-intron | C5orf34-AS1 | 5 | + | AC114956.2 | 5 | + |
| exon-exon | RNVU1-7 | 1 | - | B2M | 15 | + |
| exon-exon | ERMAP | 1 | + | CLCA2 | 1 | + |
| exon-intron | DHRS4L2 | 14 | + | DHRS4L1 | 14 | + |
| exon-exon | RNA45SN1 | 21 | + | CDKN1B | 12 | + |
| exon-intron | LOC101928075 | 14 | - | AL357153.3 | 14 | - |
| exon-exon | RNU1-2 | 1 | + | TMPRSS11A | 4 | - |
| intron-exon | LOC107985942 | 2 | + | NR4A1 | 12 | + |
| intron-exon | LOC107985736 | 1 | - | PERP | 6 | - |
| intron-exon | KRT31 | 17 | - | KRT34 | 17 | - |
| exon-exon | RNU5B-1 | 15 | + | KRT4 | 12 | - |
| exon-exon | SIRT4 | 12 | - | KRT13 | 17 | - |
| exon-exon | MAP1B | 5 | + | GUSBP15 | 5 | - |
| intron-exon | TUBG1 | 17 | + | TUBG2 | 17 | + |
| exon-exon | DYRK3-AS1 | 1 | + | DYRK3 | 1 | + |
| intron-exon | AC243829.4 | 17 | + | LOC102724850 | 17 | + |
| exon-exon | RNA45SN3 | 21 | + | CNOT4 | 7 | - |
| exon-exon | LOC107985159 | 1 | - | AKNAD1 | 1 | - |
| intron-exon | SNHG29 | 17 | + | PSMG3-AS1 | 7 | + |
| exon-exon | LOC105370053 | 12 | + | TMEM132B | 12 | + |
| intron-exon | TUBA4B | 2 | - | TUBA4A | 2 | - |
| intron-exon | AC093821.1 | 4 | + | LINC02435 | 4 | + |
| exon-exon | GEN1 | 2 | + | FAM114A2 | 5 | - |
| exon-intron | LOC105374297 | 3 | - | LOC105374298 | 3 | - |
| exon-exon | ENSA | 1 | - | GPR107 | 9 | + |
| exon-intron | LOC105371406 | 1 | + | FCGR1A | 1 | + |
| intron-exon | ABRAXAS1 | 4 | + | GPAT3 | 4 | + |
| exon-exon | WASF2 | 1 | - | KHDRBS1 | 1 | + |
| intron-exon | FRG1HP | 9 | - | LOC440896 | 9 | - |
| intron-exon | KRT72 | 12 | + | KRT73-AS1 | 12 | + |
| exon-exon | RNA45SN3 | 21 | + | HID1 | 17 | - |
| intron-exon | PPP2R3C | 14 | + | PRORP | 14 | + |
| exon-exon | LOC105370192 | 13 | - | LCP1 | 13 | - |
| exon-exon | MTPAP | 10 | - | GOLGA2P6 | 10 | - |
| exon-exon | PRM2 | 16 | - | SPATA20 | 17 | + |
| exon-exon | CRTAP | 3 | + | RTCB | 22 | - |
| exon-exon | SLPI | 20 | - | APPBP2 | 17 | - |
| exon-exon | BRK1 | 3 | + | SIM1 | 6 | - |
| exon-exon | FAM177A1 | 14 | - | SON | 21 | + |
| intron-exon | GORAB-AS1 | 1 | + | GORAB | 1 | + |
| exon-intron | C16orf82 | 16 | + | DEF6 | 6 | + |
| exon-intron | MICOS13 | 19 | + | HSD11B1L | 19 | + |
| exon-intron | RNA45SN2 | 21 | + | COPS4 | 4 | + |
| exon-exon | STT3A-AS1 | 11 | - | FEZ1 | 11 | - |
| exon-intron | SNORD3A | 17 | + | TRIM36 | 5 | - |
| intron-exon | AC114550.3 | 8 | + | LOC105379224 | 8 | + |
| exon-intron | LOC727978 | 3 | + | AC124944.3 | 3 | + |
| intron-exon | LINC00908 | 18 | + | GLE1 | 9 | + |
| exon-exon | SSBP1 | 7 | - | WEE2-AS1 | 7 | - |
| intron-exon | ODC1-DT | 2 | - | ODC1 | 2 | - |
| intron-exon | TYMS | 18 | + | TRAIP | 3 | - |
| intron-exon | SRP54-AS1 | 14 | + | SRP54 | 14 | + |
| exon-intron | EPB41L3 | 18 | - | MAPRE3 | 2 | + |
| exon-exon | RBM34 | 1 | - | GGPS1 | 1 | + |
| exon-exon | LOC105377329 | 4 | + | SNCA | 4 | + |
| exon-exon | SENP3 | 17 | + | EIF4A1 | 17 | + |
| exon-exon | LOC105372449 | 19 | - | PPP2R1A | 19 | - |
| exon-intron | LOC105376644 | 11 | - | HSD17B12 | 11 | - |
| exon-exon | LOC101927461 | 10 | - | TCERG1L | 10 | - |
| exon-exon | RN7SK | 6 | + | EWSR1 | 22 | + |
| intron-exon | GAS5 | 1 | - | LOC105372640 | 20 | + |
| exon-exon | RNA45SN2 | 21 | + | RNF168 | 3 | - |
| intron-exon | RP11-444A22.1 | 2 | - | ATP9B | 18 | + |
| exon-exon | CCNY | 10 | + | ZNF652 | 17 | - |
| intron-exon | HIBCH | 2 | + | INPP1 | 2 | + |
| exon-intron | KLF7 | 2 | + | MYOSLID-AS1 | 2 | + |
| intron-exon | NAP1L4 | 11 | - | TTC12 | 11 | + |
| exon-exon | NFIX | 19 | + | RBM5 | 3 | + |
| exon-exon | CCNB1IP1 | 14 | - | NFIL3 | 9 | - |
| exon-exon | LOC105371619 | 1 | + | KLHL20 | 1 | + |
| intron-exon | AC024603.1 | 10 | - | LRMDA | 10 | - |
| exon-exon | RNA45SN2 | 21 | + | EEF1A1P5 | 9 | + |
| intron-exon | LOC112577513 | 1 | + | EEF1AKNMT | 1 | + |
| intron-exon | Z94721.1 | 6 | - | LOC105378120 | 6 | - |
| exon-exon | FAM230A | 22 | + | KIAA1210 | X | - |
| exon-exon | APLP2 | 11 | + | EI24 | 11 | + |
| intron-exon | NDNF | 4 | + | LOC105377400 | 4 | + |
| exon-exon | ANKRD18A | 9 | + | FAM201A | 9 | + |
| intron-exon | LOC390332 | 12 | - | RDH16 | 12 | - |
| exon-exon | ZNF124 | 1 | - | USP9X | X | + |
| exon-intron | LOC105377178 | 3 | + | AC129807.1 | 3 | + |
| exon-exon | RNA45SN2 | 21 | + | ACTB | 7 | - |
| intron-exon | LOC105372896 | 1 | + | TFDP1P | 1 | + |
| exon-exon | RNU6-5P | 2 | - | CSMD1 | 8 | - |
| exon-exon | ZNF736 | 7 | + | CHMP1A | 16 | - |
| exon-exon | LOC105376686 | 1 | - | LOC107984911 | 1 | - |
| exon-exon | PPIL1 | 6 | - | SMAP2 | 1 | + |
| exon-exon | RABGAP1L | 1 | + | OSER1 | 20 | - |
| intron-exon | RNASE11 | 14 | + | LOC254028 | 14 | + |
| intron-exon | DOT1L | 19 | - | AP3D1 | 19 | - |
| intron-exon | LOC102724687 | 8 | - | CSRNP2 | 12 | - |
| exon-exon | ACE2 | X | - | UTP4 | 16 | + |
| exon-exon | PHACTR4 | 1 | + | HENMT1 | 1 | - |
| exon-intron | LINC02117 | 5 | - | GDNF-AS1 | 5 | - |
| exon-exon | RNA45SN1 | 21 | + | HLA-A | 6 | + |
| exon-exon | PLCH1 | 3 | - | SERPINA5 | 14 | + |
| exon-exon | LOC101928856 | 3 | - | TRA2B | 3 | - |
| exon-exon | MTPAP | 10 | - | GOLGA2P6 | 10 | - |
| exon-exon | LOC105369744 | 12 | - | LOC105369743 | 12 | - |
| intron-exon | ELL3 | 15 | - | FAM205A | 9 | - |
| intron-exon | CSPP1 | 8 | - | COPS5 | 8 | - |
| intron-exon | CDC40 | 6 | - | WASF1 | 6 | - |
| intron-exon | IPO4 | 14 | + | TM9SF1 | 14 | + |
| exon-exon | PDRG1 | 20 | + | CCM2L | 20 | + |
| exon-exon | POLE3 | 9 | + | C9orf43 | 9 | + |
| exon-intron | HLA-B | 6 | - | HLA-C | 6 | - |
| exon-intron | LOC101928682 | 16 | - | RPL39P30 | 16 | - |
| intron-exon | AC018558.3 | 16 | - | C2orf69P2 | 16 | - |
| exon-exon | CFAP126 | 1 | - | UBQLNL | 11 | - |
| exon-exon | SSBP1 | 7 | + | SKIL | 3 | + |
| exon-exon | ISG20L2 | 1 | - | GTPBP4 | 10 | + |
| intron-exon | LINC01137 | 1 | + | ZC3H12A | 1 | + |
| exon-exon | RNA45SN3 | 21 | + | MAZ | 16 | + |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | PCDHB11 | 5 | - | PCDHB16 | 5 | - |
| exon-exon | HPS5 | 11 | - | FAM238A | 10 | + |
| exon-intron | LOC105373845 | 2 | - | AC016903.1 | 2 | - |
| intron-exon | ZHX2 | 8 | + | DDX52 | 17 | - |
| exon-exon | RNA45SN1 | 21 | + | CCT3 | 1 | - |
| intron-exon | RP11-1152H15.1 | 14 | - | LINC02296 | 14 | - |
| intron-exon | SRP54-AS1 | 14 | + | SRP54 | 14 | + |
| intron-exon | AC003973.1 | 19 | - | LOC112268248 | 19 | - |
| intron-exon | MANCR | 10 | + | LOC105376373 | 10 | + |
| intron-exon | LOC105378937 | 1 | + | PHGDH | 1 | + |
| intron-exon | RNA5-8SP10 | 21 | + | SLC12A4 | 16 | - |
| exon-exon | RNA45SN1 | 21 | + | ETF1 | 5 | - |
| exon-exon | LOC285626 | 5 | + | LOC105377684 | 5 | + |
| intron-exon | AC009522.1 | 12 | + | LOC105369890 | 12 | + |
| exon-exon | UBB | 17 | + | SMARCA4 | 19 | + |
| intron-exon | PAF1 | 19 | - | ATRIP-TREX1 | 3 | + |
| exon-exon | H3C2 | 6 | - | RPL3 | 22 | - |
| exon-intron | LOC107984394 | 11 | + | AC092684.1 | 2 | + |
| intron-exon | AC009292.2 | 15 | + | PIAS1 | 15 | + |
| intron-exon | AC008687.1 | 19 | - | NTF6A | 19 | - |
| exon-exon | TRAPPC12 | 2 | + | FKBP5 | 6 | - |
| exon-intron | WDR74 | 11 | - | ANKS1B | 12 | - |
| exon-exon | OPN5 | 10 | + | LOC107986601 | 10 | + |
| intron-exon | SBDSP1 | 7 | - | TYW1B | 7 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | LOC105378483 | 10 | - | LYPD6B | 2 | + |
| intron-exon | LOC107985409 | 20 | - | SIRPD | 20 | - |
| exon-exon | LOC107984273 | 10 | - | GFRA1 | 10 | - |
| exon-exon | SMCP | 1 | + | C9orf43 | 9 | + |
| intron-exon | HAS2 | 8 | + | HAS2-AS1 | 8 | + |
| intron-exon | AD000671.3 | 19 | - | PSENEN | 19 | - |
| intron-exon | LOC339685 | 22 | - | LOC100506071 | 14 | - |
| exon-exon | AOC2 | 17 | - | PSME3 | 17 | - |
| intron-exon | CDC40 | 6 | - | WASF1 | 6 | - |
| intron-exon | LOC101927020 | 6 | - | CRISP2 | 6 | - |
| exon-exon | UBL4B | 1 | + | NOP56 | 20 | + |
| intron-exon | RUNX2 | 6 | - | RUNX2-AS1 | 6 | - |
| intron-exon | LOC107986261 | 4 | - | PROM1 | 4 | - |
| intron-exon | LOC105375410 | 7 | + | LOC105375411 | 7 | + |
| exon-intron | PRC1 | 15 | + | PRC1-AS1 | 15 | + |
| exon-intron | LOC102724048 | 3 | - | LINC01811 | 3 | - |
| intron-exon | VPS13B | 8 | + | TUBGCP5 | 15 | - |
| intron-exon | LOC105376467 | 10 | - | MPP7 | 10 | - |
| exon-exon | FLJ46284 | 8 | - | MICU1 | 10 | - |
| exon-intron | LOC105373688 | 2 | - | STAM2 | 2 | - |
| exon-intron | KLHL2P1 | 4 | + | LOC100131884 | 4 | + |
| exon-exon | SPCS1 | 3 | - | GLT8D1 | 3 | - |
| exon-exon | SNX33 | 15 | - | SNUPN | 15 | - |
| exon-exon | BAP1 | 3 | + | PHF7 | 3 | + |
| intron-exon | SSMEM1 | 7 | - | TMEM209 | 7 | - |
| intron-exon | LRRC72 | 7 | - | SOSTDC1 | 7 | - |
| exon-exon | LOC105373166 | 1 | - | AGT | 1 | - |
| exon-intron | LOC105377300 | 4 | + | MTHFD2L | 4 | - |
| exon-exon | LOC727978 | 3 | + | CCHCR1 | 6 | - |
| exon-exon | STT3A-AS1 | 11 | - | FEZ1 | 11 | - |
| exon-exon | RNU6-9 | 19 | + | ATG13 | 11 | + |
| intron-exon | XXYLT1 | 3 | + | RAD21 | 8 | - |
| exon-exon | HNRNPD | 4 | - | ELL | 19 | - |
| exon-exon | BROX | 1 | - | AIDA | 1 | - |
| exon-exon | LOC102724081 | 2 | + | CERS6 | 2 | + |
| exon-exon | ATG12 | 5 | + | AP3S1 | 5 | + |
| intron-exon | SLC2A14 | 12 | + | NANOGP1 | 12 | + |
| exon-exon | ZNF433 | 19 | - | ANAPC1 | 2 | - |
| exon-intron | H2BC1 | 6 | + | PRKCE | 2 | + |
| intron-exon | LSM14A | 19 | + | UBQLNL | 11 | - |
| exon-intron | SLC51A | 3 | + | PCYT1A | 3 | + |
| exon-intron | LOC400710 | 19 | - | ZNF473 | 19 | - |
| intron-exon | AC068282.1 | 2 | + | MAP3K2 | 2 | + |
| exon-exon | SPEM1 | 17 | + | FGF11 | 17 | + |
| exon-intron | LOC112268431 | 2 | - | AC010149.1 | 2 | - |
| intron-exon | STK4 | 20 | - | STK4-AS1 | 20 | - |
| exon-exon | HNRNPH1 | 5 | + | LOC100289470 | 5 | + |
| intron-exon | TCF12 | 15 | + | CMAS | 12 | + |
| exon-exon | LOC102724327 | 6 | + | IL17F | 6 | + |
| exon-intron | FUT8 | 14 | + | GPHN | 14 | + |
| exon-exon | TMEM139 | 7 | + | CASP2 | 7 | + |
| exon-exon | RNA45SN3 | 21 | + | EIF3L | 22 | + |
| intron-exon | RNASE11 | 14 | + | LOC254028 | 14 | + |
| intron-exon | AC090518.1 | 15 | - | LOC105370832 | 15 | - |
| intron-exon | AC007091.1 | 7 | + | LOC105375179 | 7 | + |
| intron-exon | TRB | 7 | + | TRBV27 | 7 | + |
| intron-exon | AC135166.1 | 8 | + | LOC105375738 | 8 | + |
| exon-intron | RNA45SN3 | 21 | + | TMEM242 | 6 | - |
| intron-exon | AF001550.1 | 16 | + | ZP2 | 16 | + |
| intron-exon | AC011481.1 | 19 | + | CLPTM1 | 19 | + |
| intron-exon | RP11-707P17.1 | 15 | + | DMXL2 | 15 | + |
| exon-intron | RNA45SN2 | 21 | + | RAB27B | 18 | - |
| exon-exon | TMEM225B | 7 | + | PDILT | 16 | + |
| exon-intron | LINC01182 | 4 | + | LOC107986182 | 4 | + |
| exon-exon | RNASE1 | 14 | - | MAP4K3 | 2 | - |
| exon-intron | LOC105379117 | 5 | + | LOC105379118 | 5 | + |
| exon-exon | LOC105376037 | 9 | + | DCAF10 | 9 | + |
| exon-intron | PRM2 | 16 | - | CACNA1C | 12 | + |
| exon-exon | LOC105373247 | X | + | NONO | X | + |
| intron-exon | GATAD1 | 7 | + | RNF38 | 9 | - |
| exon-exon | BRAP | 12 | - | CHKB-CPT1B | 22 | - |
| intron-exon | ANP32B | 9 | - | HEMGN | 9 | - |
| exon-intron | LINC00958 | 11 | - | TEAD1 | 11 | - |
| intron-exon | LOC112997596 | 5 | + | GPBP1 | 5 | + |
| intron-exon | RNR2 | MT | + | YIPF5 | 5 | - |
| intron-exon | OPCML | 11 | - | NRDC | 1 | - |
| exon-exon | PERM1 | 1 | - | PLEKHN1 | 1 | - |
| intron-exon | HIVEP1 | 6 | + | DDX25 | 11 | + |
| exon-intron | LOC105377500 | 4 | - | AC009567.1 | 4 | - |
| exon-exon | RNU1-2 | 1 | + | TSSC4 | 11 | - |
| exon-exon | MTPAP | 10 | - | GOLGA2P6 | 10 | - |
| intron-exon | TEX10 | 9 | + | LOC105376177 | 9 | + |
| exon-exon | RNA45SN2 | 21 | + | BRD7P2 | 3 | + |
| exon-intron | LOC105378208 | 5 | + | LOC105378209 | 5 | + |
| intron-exon | FRG1HP | 9 | - | LOC440896 | 9 | - |
| exon-intron | HNRNPA3 | 2 | + | HNRNPA3 | 2 | - |
| exon-exon | RNA45SN3 | 21 | + | CDK5RAP3 | 17 | + |
| exon-exon | TSPYL2 | X | + | HGSNAT | 8 | + |
| intron-exon | LOC112577513 | 1 | + | EEF1AKNMT | 1 | + |
| intron-exon | MGAT4C | 12 | - | CNOT2 | 12 | + |
| intron-exon | BTBD19 | 1 | + | CCDC34 | 11 | - |
| exon-exon | HSPA1L | 6 | - | EEF1A1 | 6 | - |
| exon-intron | LINC02370 | 12 | + | AC140118.1 | 12 | + |
| intron-exon | ZMAT5 | 22 | + | ENAH | 1 | - |
| intron-exon | LINC01906 | 18 | + | LOC105372009 | 18 | + |
| exon-exon | ODC1-DT | 2 | - | ODC1 | 2 | - |
| intron-exon | PBRM1 | 3 | + | GNL3 | 3 | + |
| exon-exon | LOC105371191 | 16 | - | DUSP22 | 6 | + |
| intron-exon | AF241726.2 | X | + | OTC | X | + |
| exon-exon | ZSCAN16-AS1 | 6 | - | NEO1 | 15 | + |
| exon-exon | MBD4 | 3 | + | IFT122 | 3 | + |
| intron-exon | AGTPBP1 | 9 | - | LOC101927603 | 9 | - |
| exon-exon | LOC105379641 | 6 | - | LOC105375005 | 6 | - |
| intron-exon | SHOC2 | 10 | - | BBIP1 | 10 | - |
| intron-exon | RNA18SP5 | 21 | + | MAPKBP1 | 15 | + |
| exon-exon | RNA45SN3 | 21 | + | LUC7L3 | 17 | + |
| exon-exon | RNASE1 | 14 | - | UBL3 | 13 | - |
| exon-intron | LOC440084 | 12 | - | PRB2 | 12 | - |
| intron-exon | KIFC3 | 16 | - | TEN1-CDK3 | 17 | + |
| exon-exon | ZBED9 | 6 | - | NUP50 | 22 | + |
| intron-exon | LOC105374069 | 9 | - | VPS13A | 9 | + |
| intron-exon | FAM106A | 17 | - | USP32P2 | 17 | - |
| exon-exon | DRG1 | 22 | + | SZRD1 | 1 | + |
| exon-exon | LINC00115 | 1 | + | LINC01128 | 1 | + |
| exon-intron | RPL39L | 3 | - | ST6GAL1 | 3 | - |
| intron-exon | KCNIP2-AS1 | 10 | - | OGA | 10 | - |
| exon-exon | LOC339260 | 17 | + | CCDC144NL-AS1 | 17 | + |
| exon-exon | AGAP11 | 10 | - | ADIRF | 10 | - |
| exon-exon | LOC105371961 | 18 | + | RADIL | 7 | - |
| exon-exon | AGAP11 | 10 | - | MMRN2 | 10 | - |
| intron-exon | AC073257.1 | 2 | - | LOC105373585 | 2 | - |
| exon-intron | G3BP1 | 5 | + | LOC112267935 | 5 | + |
| exon-intron | MAPK7 | 17 | - | B9D1 | 17 | - |
| exon-exon | GABRG3-AS1 | 15 | - | CEP350 | 1 | + |
| exon-exon | TBC1D15 | 12 | + | ATF7IP | 12 | + |
| exon-exon | FABP6 | 5 | + | CRK | 17 | - |
| exon-exon | TRAF6 | 11 | - | GANAB | 11 | - |
| exon-exon | MFAP3 | 5 | + | GALNT10 | 5 | + |
| intron-exon | TAF10 | 11 | + | ZNF217 | 20 | - |
| exon-intron | LOC105371441 | 1 | + | LOC105371442 | 1 | + |
| intron-exon | LOC107985736 | 1 | - | IFT122 | 3 | + |
| intron-exon | ZNF514 | 2 | + | ZNF2 | 2 | + |
| exon-exon | ZBED5 | 11 | - | EIF4G2 | 11 | - |
| exon-exon | MYO5C | 15 | - | FAM214A | 15 | - |
| exon-exon | ATP5PO | 21 | - | NCOA4 | 10 | - |
| intron-exon | AC015853.2 | 17 | + | VPS53 | 17 | + |
| exon-exon | LOC107984397 | 11 | - | DPAGT1 | 11 | - |
| exon-exon | LOC107984208 | 10 | - | USP6NL | 10 | - |
| exon-exon | ZNF213-AS1 | 16 | - | ZNF205 | 16 | - |
| exon-exon | RNA45SN1 | 21 | + | IFT122 | 3 | + |
| exon-exon | LOC105372902 | 1 | + | RCOR3 | 1 | + |
| intron-exon | AL354919.2 | 1 | + | SPOCD1 | 1 | + |
| exon-intron | KDM2A | 11 | + | LOC107984841 | 1 | - |
| intron-exon | CNTN2 | 1 | - | NFASC | 1 | - |
| exon-exon | RNU6ATAC | 9 | - | WDTC1 | 1 | + |
| intron-exon | C1S | 12 | + | LOC100419825 | 12 | + |
| exon-exon | LOC101059948 | 19 | - | LHB | 19 | - |
| intron-exon | LINC01198 | 13 | - | LOC105375005 | 6 | - |
| exon-intron | LOC101927468 | 1 | - | NBPF11 | 1 | - |
| intron-exon | RP11-469A15.2 | 1 | - | ZNF281 | 1 | - |
| exon-exon | TCP1 | 6 | + | MRPL18 | 6 | + |
| exon-exon | PPDPF | 20 | + | RBBP8NL | 20 | - |
| exon-intron | LOC105375317 | 7 | - | LINC01005 | 7 | - |
| exon-exon | JUND | 19 | - | MOV10L1 | 22 | + |
| exon-exon | PRM1 | 16 | - | AGPS | 2 | + |
| intron-exon | LOC112935944 | 3 | - | SMARCC1 | 3 | - |
| exon-exon | PDP1 | 8 | + | ZNRD1ASP | 6 | - |
| exon-intron | RNA45SN2 | 21 | + | SEMA6C | 1 | - |
| intron-exon | RNF212B | 14 | - | SLC7A8 | 14 | - |
| exon-exon | RPS29 | 14 | - | AP2B1 | 17 | + |
| intron-exon | AC011124.1 | 8 | - | LOC105375875 | 8 | - |
| intron-exon | AC073320.1 | 7 | + | ZC3HC1 | 7 | + |
| exon-exon | LOC101926974 | 2 | + | EPAS1 | 2 | + |
| exon-intron | LOC728613 | 5 | - | AGFG1 | 2 | + |
| exon-intron | KRTCAP2 | 1 | + | TRIM46 | 1 | + |
| exon-exon | RNU5A-1 | 15 | + | SMARCC1 | 3 | - |
| intron-exon | AC004009.1 | 7 | + | LOC105375207 | 7 | + |
| exon-exon | LOC112268071 | 11 | + | LOC107984304 | 11 | + |
| intron-exon | SEC22B4P | 1 | + | MACF1 | 1 | + |
| intron-exon | ATOX1 | 5 | - | RPLP1P6 | 5 | - |
| exon-intron | ZNRD2-AS1 | 11 | - | IL3RA | Y | + |
| exon-exon | ACOT11 | 1 | + | MROH7-TTC4 | 1 | + |
| exon-exon | LOC102723704 | 4 | + | RGPD8 | 2 | - |
| exon-exon | ND4 | MT | + | ASB9 | X | - |
| intron-exon | COPZ2 | 17 | + | NFE2L1 | 17 | + |
| intron-exon | LOC105374952 | 6 | - | NUP153 | 6 | - |
| intron-exon | ZNF25-DT | 10 | - | ZNF25 | 10 | - |
| exon-exon | CCDC183 | 9 | + | RABL6 | 9 | + |
| intron-exon | OSCP1 | 1 | - | BMS1 | 10 | + |
| exon-exon | GPR89A | 1 | - | NBPF25P | 1 | - |
| exon-exon | LOC105375020 | 6 | + | MSH5-SAPCD1 | 6 | + |
| exon-intron | LOC105377095 | 3 | + | AC115282.2 | 3 | + |
| exon-exon | LOC105372548 | 20 | + | OTUD4 | 4 | - |
| exon-exon | BHMT | 5 | - | DMGDH | 5 | - |
| exon-exon | LOC646976 | 1 | + | RALGPS2 | 1 | + |
| exon-intron | LOC105371614 | 1 | + | LOC112577513 | 1 | + |
| intron-exon | GNAO1 | 16 | - | LOC283856 | 16 | - |
| intron-exon | RNF212B | 14 | - | SLC7A8 | 14 | - |
| intron-exon | SNHG25 | 17 | + | HNRNPUL1 | 19 | + |
| exon-exon | SCGB1B2P | 19 | + | ZNF302 | 19 | + |
| exon-exon | SAYSD1 | 6 | - | MAP2K4 | 17 | + |
| exon-intron | LOC105374297 | 3 | - | LOC105374298 | 3 | - |
| exon-intron | IHO1 | 3 | + | PRPS2 | X | + |
| exon-exon | LOC105372478 | 19 | - | LOC100128398 | 19 | - |
| exon-intron | RNA45SN3 | 21 | + | MIR548A1HG | 6 | + |
| exon-exon | LOC105375410 | 7 | - | SLC25A13 | 7 | - |
| intron-exon | LOC105379297 | 8 | - | LOC101929028 | 8 | - |
| intron-exon | BCL2L2-PABPN1 | 14 | + | SLC12A2 | 5 | + |
| intron-exon | LOC107985736 | 1 | - | C11orf49 | 11 | + |
| intron-exon | LOC105375317 | 7 | - | LINC01005 | 7 | - |
| exon-exon | TFG | 3 | + | ADGRG7 | 3 | + |
| exon-exon | OCIAD1 | 4 | + | MTOR | 1 | - |
| exon-exon | LOC105371986 | 18 | - | UBN2 | 7 | + |
| exon-exon | STT3B | 3 | + | PER3 | 1 | + |
| exon-exon | MRPL40 | 22 | - | HIRA | 22 | - |
| intron-exon | ESCO2 | 8 | - | CCDC25 | 8 | - |
| intron-exon | AC004471.1 | 22 | - | DGCR2 | 22 | - |
| intron-exon | KCNIP2-AS1 | 10 | - | OGA | 10 | - |
| exon-exon | ZNF331 | 19 | + | WDR37 | 10 | + |
| exon-exon | LOC105370203 | 13 | - | RNF38 | 9 | - |
| intron-exon | AP000944.1 | 11 | + | SLC25A45 | 11 | + |
| intron-exon | ZNF702P | 19 | - | ZNF816 | 19 | - |
| exon-exon | RNA45SN3 | 21 | + | NACC1 | 19 | + |
| intron-exon | ABI1 | 10 | - | SAFB | 19 | + |
| intron-exon | MCM3AP-AS1 | 21 | - | LSS | 21 | - |
| exon-exon | USP6NL | 10 | - | GPHN | 14 | + |
| intron-exon | LOC105379109 | 5 | - | SIPA1L1 | 14 | + |
| intron-exon | PHF13 | 1 | - | KLHL21 | 1 | - |
| intron-exon | LOC105370768 | 15 | - | LOC105370769 | 15 | - |
| intron-exon | PCMTD2 | 20 | + | NAA60 | 16 | + |
| intron-exon | LOC112067715 | 11 | - | UEVLD | 11 | - |
| intron-exon | PEBP4 | 8 | - | APLF | 2 | + |
| intron-exon | AL391834.3 | 9 | + | ACER2 | 9 | + |
| exon-intron | CPEB2 | 4 | - | CPEB2-DT | 4 | - |
| exon-exon | SCCPDH | 1 | + | SMARCC2 | 12 | - |
| intron-exon | LOC105379300 | 8 | - | LOC100128993 | 8 | - |
| exon-exon | RPL12P27 | 10 | - | ARHGAP19-SLIT1 | 10 | - |
| exon-intron | LOC440084 | 12 | - | PRB2 | 12 | - |
| intron-exon | BX119904.2 | X | - | LOC100506955 | X | - |
| exon-intron | FABP5P10 | 2 | - | AC018731.1 | 2 | - |
| intron-exon | LOC643711 | 12 | + | HECTD1 | 14 | - |
| intron-exon | PPP4R1 | 18 | - | SASH1 | 6 | + |
| exon-exon | GPR89A | 1 | - | NBPF25P | 1 | - |
| exon-intron | B3GALNT1 | 3 | + | NMD3 | 3 | + |
| exon-intron | LOC105374458 | 2 | - | USO1 | 4 | - |
| exon-exon | LOC105377187 | 3 | - | LOC105377186 | 3 | - |
| intron-exon | LOC442028 | 2 | + | TEKT4 | 2 | + |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| exon-exon | RFX7 | 15 | - | AGO3 | 1 | + |
| exon-exon | LOC105369167 | 2 | + | LOC101927533 | 2 | + |
| intron-exon | AL512427.2 | 6 | + | MED24 | 17 | - |
| exon-exon | LOC105378635 | 1 | - | DNAH1 | 3 | + |
| intron-exon | SNHG1 | 11 | - | EHD1 | 11 | - |
| exon-intron | GSTT4 | 22 | - | AC253536.1 | 22 | - |
| intron-exon | TEX38 | 1 | - | ATPAF1 | 1 | - |
| exon-intron | LINC02249 | 15 | + | AC135731.2 | 15 | + |
| intron-exon | CKS1B | 1 | - | SHC1 | 1 | - |
| exon-exon | PDCD6IPP2 | 15 | + | APBA2 | 15 | + |
| exon-intron | EPPIN-WFDC6 | 20 | - | MIR4435-2HG | 2 | + |
| exon-exon | LOC107985324 | 19 | - | LOC105372328 | 19 | - |
| intron-exon | AC017015.2 | 3 | - | GBE1 | 3 | - |
| exon-exon | BOLA2P1 | 18 | - | YES1 | 18 | - |
| intron-exon | POLR3F | 20 | - | DZANK1 | 20 | - |
| exon-exon | TMCO6 | 5 | + | COL6A2 | 21 | + |
| exon-intron | SYNJ2 | 6 | + | LOC105375416 | 7 | - |
| intron-exon | AC098848.1 | 18 | - | RAB27B | 18 | - |
| exon-intron | RNA45SN2 | 21 | + | ORMDL1 | 2 | - |
| exon-exon | F11-AS1 | 4 | - | ULK4 | 3 | - |
| intron-exon | LINC00882 | 3 | - | LOC105374029 | 3 | - |
| exon-intron | PITRM1-AS1 | 10 | + | GOLGA7 | 8 | - |
| exon-exon | PITPNB | 22 | - | CCDC117 | 22 | + |
| intron-exon | LINC00506 | 3 | + | XK | X | + |
| intron-exon | LOC105378424 | 10 | + | LINC00865 | 10 | + |
| exon-exon | RNA45SN2 | 21 | + | NBR1 | 17 | + |
| exon-exon | SURF4 | 9 | + | STKLD1 | 9 | + |
| exon-exon | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-exon | IST1 | 16 | + | ACAP2 | 3 | - |
| exon-exon | RNA45SN2 | 21 | + | ABHD17B | 9 | - |
| exon-exon | SRRM2 | 16 | + | LOC105376143 | 9 | + |
| exon-exon | LOC105378141 | 6 | + | SMOC2 | 6 | + |
| intron-exon | RNA5-8SP10 | 21 | + | TDRD5 | 1 | + |
| intron-exon | RP11-146E13.4 | 14 | - | LNCRNA-ATB | 14 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | RBM26 | 13 | - | ESF1 | 20 | - |
| exon-exon | KCNMA1 | 10 | - | RETREG3 | 17 | - |
| exon-exon | UBE2Q2P2 | 15 | + | ISLR2 | 15 | + |
| exon-exon | RPS9 | 19 | + | SCAF8 | 6 | + |
| intron-exon | FZD6 | 8 | - | LOC105369147 | 8 | - |
| intron-exon | SMIM2 | 13 | - | LINC00390 | 13 | - |
| exon-exon | BROX | 1 | - | AIDA | 1 | - |
| intron-exon | AL133227.1 | 20 | + | ELMO2 | 20 | + |
| exon-intron | ZNF548 | 19 | + | ZNF749 | 19 | + |
| exon-exon | LOC105372449 | 19 | - | PPP2R1A | 19 | - |
| intron-exon | AL162713.2 | 13 | - | ATM | 11 | + |
| exon-exon | LOC112268015 | 8 | - | LOC101929709 | 8 | - |
| exon-exon | WRAP73 | 1 | - | RGPD1 | 2 | + |
| intron-exon | AC104066.2 | 4 | - | USP46 | 4 | - |
| intron-exon | KIAA0825 | 5 | - | PWWP3A | 19 | + |
| intron-exon | BPNT1 | 1 | + | IARS2 | 1 | + |
| exon-exon | LINC00654 | 20 | - | LOC105372513 | 20 | - |
| exon-exon | CWC22 | 2 | - | ZNF385B | 2 | - |
| exon-exon | PSMC1 | 14 | + | SYTL1 | 1 | + |
| exon-exon | RNA45SN3 | 21 | + | ARHGDIA | 17 | - |
| intron-exon | RORC | 1 | + | C2CD4D-AS1 | 1 | + |
| intron-exon | SNHG1 | 11 | - | ACTB | 7 | - |
| exon-intron | IGHV4-39 | 14 | - | IGH | 14 | - |
| exon-exon | MICA | 6 | + | AGPAT1 | 6 | - |
| exon-intron | TRBC2 | 7 | + | GNAS | 20 | + |
| exon-intron | SRSF6 | 20 | + | SMARCB1 | 22 | + |
| exon-exon | STK17B | 2 | - | CUX1 | 7 | + |
| exon-exon | WIPF1 | 2 | - | DENND11 | 7 | - |
| intron-exon | SSH2 | 17 | - | UTP14C | 13 | + |
| intron-exon | ADAMTS4 | 1 | + | NDUFS2 | 1 | + |
| intron-exon | AC084026.1 | 8 | + | LOC105379351 | 8 | + |
| intron-exon | AL121985.1 | 1 | + | CD48 | 1 | + |
| exon-exon | H3C4 | 6 | - | RPL15P3 | 6 | + |
| exon-exon | LOC107984998 | 1 | - | ADGRL4 | 1 | - |
| exon-exon | RNA45SN1 | 21 | + | AHCY | 20 | - |
| exon-exon | RNA45SN3 | 21 | + | EEF1A1P5 | 9 | + |
| exon-intron | NOP16 | 5 | - | TMEM147-AS1 | 19 | - |
| exon-exon | ANTXRLP1 | 10 | - | AGAP7P | 10 | - |
| intron-exon | STXBP2 | 19 | - | PCP2 | 19 | - |
| exon-intron | TRAV8-3 | 14 | + | TRA | 14 | + |
| exon-exon | LOC107985213 | 1 | - | LOC107985212 | 1 | - |
| exon-exon | H3C7 | 6 | + | H2BC9 | 6 | + |
| exon-exon | H3C2 | 6 | - | IL10RB | 21 | + |
| exon-exon | USP35 | 11 | + | ATAD3B | 1 | + |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | TRB | 7 | + | TRBV2 | 7 | + |
| exon-intron | LOC107984933 | 1 | + | LOC107984934 | 1 | + |
| exon-exon | EPC1 | 10 | - | ZEB1 | 10 | + |
| exon-intron | IGHV3-30 | 14 | - | IGH | 14 | - |
| exon-intron | IGHV3-33 | 14 | - | IGH | 14 | - |
| exon-intron | LDC1P | 1 | + | LINC01226 | 1 | + |
| intron-exon | FMN1 | 15 | - | SMARCA5 | 4 | + |
| exon-intron | NAA50 | 3 | - | SHFL | 19 | + |
| intron-exon | AC005580.1 | 19 | - | LOC107985269 | 19 | - |
| intron-exon | AC104850.2 | 3 | - | CCR8 | 3 | - |
| exon-intron | YPEL5 | 2 | + | DGCR2 | 22 | - |
| intron-exon | RNR1 | MT | + | EEF1A1P5 | 9 | + |
| exon-intron | STAG3L5P | 7 | + | PVRIG2P | 7 | + |
| exon-exon | CD3E | 11 | + | ORAI2 | 7 | + |
| exon-exon | RNA45SN2 | 21 | + | RPL22 | 1 | - |
| intron-exon | AL035665.2 | 20 | - | LOC101927098 | 20 | - |
| exon-exon | CIAO2A | 15 | - | PRKCB | 16 | + |
| exon-exon | EEF1A1P6 | 7 | - | LEF1 | 4 | - |
| exon-exon | SAP18 | 13 | + | ILF2 | 1 | - |
| exon-exon | RPS19 | 19 | + | DCAF8 | 1 | - |
| intron-exon | TRB | 7 | + | TRBC2 | 7 | + |
| exon-exon | TRAV38-2DV8 | 14 | + | LOC105370401 | 14 | - |
| exon-exon | BMF | 15 | - | ZNF407 | 18 | + |
| intron-exon | IGH | 14 | - | IGHV4-34 | 14 | - |
| exon-exon | LOC105375563 | 7 | - | ENTPD6 | 20 | + |
| exon-exon | INTS11 | 1 | - | COQ8A | 1 | + |
| exon-exon | LINC01260 | 20 | - | ADA | 20 | - |
| exon-exon | LOC100289511 | 14 | + | SRSF5 | 14 | + |
| exon-exon | TBC1D19 | 4 | + | MON2 | 12 | + |
| intron-exon | LHFPL2 | 5 | - | SSBP2 | 5 | - |
| exon-exon | LAT | 16 | + | ANKZF1 | 2 | + |
| intron-exon | IGH | 14 | - | IGHV4-30-2 | 14 | - |
| exon-exon | H2AC17 | 6 | - | EEF1A1 | 6 | - |
| intron-exon | AL136181.1 | 10 | + | DNTT | 10 | + |
| exon-exon | ZNF266 | 19 | - | DENND5A | 11 | - |
| exon-exon | LOC101928236 | 3 | + | DCUN1D1 | 3 | - |
| exon-exon | ABI1 | 10 | - | CLMN | 14 | - |
| exon-exon | ZNF688 | 16 | + | ZNF785 | 16 | + |
| exon-exon | MAU2 | 19 | - | SUGP1 | 19 | - |
| intron-exon | LINC01226 | 1 | + | TINAGL1 | 1 | + |
| exon-exon | TMEM140 | 7 | + | RUBCNL | 13 | - |
| exon-intron | SDHAP2 | 3 | + | MIR570HG | 3 | + |
| exon-exon | RNA45SN3 | 21 | + | RASGRP2 | 11 | - |
| exon-exon | ACTB | 7 | - | RNA45SN2 | 21 | + |
| exon-exon | CD74 | 5 | - | TPP1 | 11 | - |
| exon-exon | CDH3 | 16 | + | RRM2 | 2 | + |
| exon-exon | YME1L1 | 10 | + | MASTL | 10 | + |
| intron-exon | RBBP8 | 18 | - | SPATS2L | 2 | + |
| exon-exon | LOC102724135 | 15 | + | NPIPB5 | 16 | + |
| intron-exon | TRA | 14 | + | TRAC | 14 | + |
| exon-exon | RPL30 | 8 | - | TBC1D5 | 3 | - |
| intron-exon | LOC105379273 | Y | - | TEKT4P1 | Y | - |
| exon-intron | LOC154761 | 7 | - | TCAF2 | 7 | - |
| intron-exon | IGH | 14 | - | IGHE | 14 | - |
| exon-intron | MTRNR2L1 | 17 | + | CD1A | 1 | + |
| exon-intron | RNA45SN1 | 21 | + | PBX3 | 9 | + |
| intron-exon | ATAD3B | 1 | + | ATAD3A | 1 | + |
| exon-exon | LOC107985213 | 1 | - | LOC107985212 | 1 | - |
| intron-exon | AL121985.1 | 1 | + | CD48 | 1 | + |
| exon-exon | CD74 | 5 | - | NUSAP1 | 15 | + |
| exon-intron | LOC105370655 | 14 | - | RP11-61O1.1 | 14 | - |
| exon-exon | LOC105371677 | 1 | - | PTPRC | 1 | + |
| exon-exon | FAM111B | 11 | + | FAM111A | 11 | + |
| exon-intron | LOC102725021 | 15 | - | LOC106736469 | 15 | + |
| exon-intron | RSRP1 | 1 | - | TARS2 | 1 | + |
| exon-exon | LOC105379499 | 21 | - | RNGTT | 6 | - |
| exon-intron | RNA45SN3 | 21 | + | ARNTL | 11 | + |
| intron-exon | RNR2 | MT | + | CD247 | 1 | - |
| exon-intron | LINC02765 | 1 | + | AC092811.1 | 1 | + |
| exon-exon | ABHD14B | 3 | - | PCBP4 | 3 | - |
| exon-exon | LINC01715 | 1 | + | HBS1L | 6 | - |
| exon-exon | RNA45SN2 | 21 | + | PARP10 | 8 | - |
| exon-exon | SECISBP2 | 9 | + | ENY2 | 8 | + |
| exon-exon | AGO4 | 1 | + | FAM91A1 | 8 | + |
| exon-exon | YWHAZ | 8 | - | AZIN1 | 8 | - |
| exon-exon | RNA45SN1 | 21 | + | ZNF267 | 16 | + |
| exon-exon | CAPN1 | 11 | + | CS | 12 | - |
| exon-exon | NAMPT | 7 | - | CD69 | 12 | - |
| exon-exon | RNA45SN1 | 21 | + | VAMP1 | 12 | - |
| exon-exon | NFKBID | 19 | - | NXF1 | 11 | - |
| exon-exon | PRR13 | 12 | + | HNRNPA2B1 | 7 | - |
| exon-exon | ATP2B4 | 1 | + | SIRT3 | 11 | - |
| intron-exon | VLDLR-AS1 | 9 | + | VLDLR | 9 | + |
| intron-exon | OR4N2 | 14 | - | OR4N1P | 14 | - |
| exon-exon | MAPRE2 | 18 | + | GOLGA8A | 15 | - |
| exon-intron | LCP2 | 5 | - | NAP1L4 | 11 | - |
| exon-exon | CELF2 | 10 | + | AHCYL2 | 7 | + |
| exon-intron | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-intron | OR2C3 | 1 | - | GCSAML-AS1 | 1 | - |
| exon-intron | LDC1P | 1 | + | LINC01226 | 1 | + |
| intron-exon | TXN | 9 | - | LOC107984138 | 16 | - |
| exon-exon | ING4 | 12 | - | ATP2B4 | 1 | + |
| exon-exon | CEP85L | 6 | - | CUL1 | 7 | + |
| exon-exon | ARHGEF6 | X | - | RNA45SN2 | 21 | + |
| exon-intron | TRBJ1-3 | 7 | + | TRB | 7 | + |
| intron-exon | ZNF213 | | + | ZNF174 | | + |
| exon-exon | NAP1L1 | 12 | - | SLC38A1 | 12 | - |
| exon-intron | TRBV2 | 7 | + | TRB | 7 | + |
| exon-exon | GRAMD2B | 5 | + | RNA45SN1 | 21 | + |
| exon-intron | LOC107984606 | 13 | - | LOC107984624 | 13 | - |
| exon-intron | MDM4 | 1 | + | LOC105375920 | 8 | + |
| exon-intron | TRBV12-4 | 7 | + | TRB | 7 | + |
| exon-exon | NCOA3 | 20 | + | BLOC1S5-TXNDC5 | 6 | - |
| exon-exon | RNA45SN1 | 21 | + | SRSF5 | 14 | + |
| exon-exon | CYP1A1 | 15 | - | FTSJ3 | 17 | - |
| intron-exon | LDC1P | 1 | + | LINC01226 | 1 | + |
| intron-exon | RP11-80H5.9 | 10 | - | FLJ37201 | 10 | - |
| intron-exon | IGH | 14 | - | IGHV1-18 | 14 | - |
| exon-intron | RBCK1 | 20 | + | PGGHG | 11 | + |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| exon-exon | LDC1P | 1 | + | LINC01226 | 1 | + |
| intron-exon | TRA | 14 | + | TRAC | 14 | + |
| exon-exon | RNA45SN1 | 21 | + | SELENOW | 19 | + |
| exon-exon | CARD8 | 19 | - | DDX19B | 16 | + |
| exon-exon | HCFC1 | X | - | MAP1S | 19 | + |
| intron-exon | AC097534.1 | 4 | - | GALNT7 | 4 | - |
| intron-exon | CCDC200 | 17 | - | ITGA5 | 12 | - |
| exon-intron | KRT8P3 | 8 | + | ZNF765-ZNF761 | 19 | + |
| exon-exon | DLEU1 | 13 | + | STIM1 | 11 | + |
| exon-intron | TRBV6-3 | 7 | + | TRB | 7 | + |
| intron-exon | EXOC4 | 7 | + | MCAM | 11 | - |
| intron-exon | LOC112997596 | 5 | + | GPBP1 | 5 | + |
| exon-exon | ZFAS1 | 20 | + | MAU2 | 19 | + |
| exon-exon | RNA45SN2 | 21 | + | TPR | 1 | - |
| exon-intron | SLC7A6 | 16 | + | PRMT7 | 16 | + |
| exon-exon | TUBB4B | 9 | + | A2M | 12 | - |
| intron-exon | LRRFIP1 | 2 | - | CALCOCO2 | 17 | + |
| intron-exon | C1orf112 | 1 | - | SELP | 1 | - |
| exon-exon | MARCHF6 | 5 | + | ZFAND3 | 6 | + |
| exon-exon | LOC105378502 | 10 | + | EMX2OS | 10 | + |
| exon-exon | RNA45SN2 | 21 | + | HNRNPC | 14 | - |
| intron-exon | AC136475.3 | 11 | + | PGGHG | 11 | + |
| exon-intron | RBM14 | 11 | + | RBM4 | 11 | + |
| intron-exon | AP002383.2 | 11 | - | AMOTL1 | 11 | - |
| exon-exon | DDX5 | 17 | - | TSC2 | 16 | + |
| exon-exon | ABHD11 | 7 | + | EXOC4 | 7 | + |
| exon-exon | ZNF439 | 19 | + | MICAL1 | 6 | - |
| exon-intron | BCLAF1 | 6 | - | PSMB1 | 6 | - |
| exon-exon | EEF1D | 8 | - | UBE2L3 | 22 | + |
| exon-exon | STIM1-AS1 | 11 | + | STIM1 | 11 | + |
| exon-exon | H2BC8 | 6 | - | SRSF5 | 14 | + |
| exon-exon | MTERF1 | 7 | - | ELOVL5 | 6 | - |
| exon-intron | TTTY14 | Y | - | USP9YP10 | Y | - |
| exon-intron | LOC107986082 | 3 | + | LOC107986083 | 3 | + |
| exon-exon | MTMR2 | 11 | - | ATP2C1 | 3 | + |
| exon-exon | LOC100507373 | 19 | + | MCM3AP | 21 | - |
| exon-exon | RNA45SN1 | 21 | + | GGA2 | 16 | - |
| intron-exon | ARPC4-TTLL3 | 3 | + | WASH6P | X | + |
| intron-exon | SOX2-OT | 3 | + | ITPR2 | 12 | - |
| intron-exon | LOC112997591 | 5 | - | FLJ32255 | 5 | - |
| intron-exon | LOC105377621 | 4 | + | NFKB1 | 4 | + |
| exon-exon | ZNF337-AS1 | 20 | + | GALNT2 | 1 | + |
| intron-exon | ZNF100 | 19 | - | XPO1 | 2 | - |
| exon-exon | LOC100507373 | 19 | + | PEX5 | 12 | + |
| exon-intron | H4C8 | 6 | - | LOC105374985 | 6 | - |
| intron-exon | LOC105371598 | 1 | - | GPA33 | 1 | - |
| exon-exon | BST2 | 19 | - | CCDC194 | 19 | - |
| exon-exon | LOC105371709 | 17 | + | PDCD6IP | 3 | + |
| exon-intron | GARS1 | 7 | - | GARS-DT | 7 | - |
| intron-exon | MEIG1 | 10 | - | DCLRE1C | 10 | - |
| exon-intron | TGOLN2 | 2 | - | TCF7L1 | 2 | - |
| exon-exon | LOC107985213 | 1 | - | LOC107985212 | 1 | - |
| exon-intron | RNA45SN2 | 21 | + | CYP2R1 | 11 | - |
| exon-intron | LOC107984516 | 12 | + | RP11-114G22.1 | 12 | + |
| exon-intron | SYMPK | 19 | - | INTS11 | 1 | - |
| exon-exon | LOC107987132 | 9 | + | RABL6 | 9 | + |
| exon-intron | LOC105370655 | 14 | - | TTF1 | 9 | - |
| exon-intron | TRAV41 | 14 | + | TRA | 14 | + |
| exon-intron | CD3D | 11 | - | MPZL2 | 11 | - |
| intron-exon | SNHG32 | 6 | + | ST8SIA4 | 5 | - |
| exon-exon | FCMR | 1 | - | SEPTIN9 | 17 | + |
| exon-exon | PLEKHA2 | 8 | + | ISLR | 15 | + |
| intron-exon | N4BP2 | 4 | + | SLC25A37 | 8 | + |
| exon-exon | RABGAP1 | 9 | + | MLPH | 2 | + |
| exon-intron | SUMO1 | 2 | - | MYH10 | 17 | + |
| intron-exon | HIVEP3 | 1 | - | PRKRA | 2 | - |
| exon-exon | TMEM30A | 6 | - | TPRG1L | 1 | + |
| exon-exon | NEAT1 | 11 | + | MBP | 18 | - |
| exon-exon | NPEPPS | 17 | + | CREBL2 | 12 | + |
| exon-exon | SPRED1 | 15 | + | SEC14L2 | 22 | + |
| intron-exon | PPHLN1 | 12 | + | SKAP2 | 7 | - |
| exon-exon | LOC105377623 | 4 | - | LOC107986194 | 4 | - |
| intron-exon | RBM47 | 4 | - | NREP | 5 | - |
| exon-exon | RNU1-2 | 1 | + | MTMR14 | 3 | + |
| intron-exon | ULK2 | 17 | - | HSPH1 | 13 | - |
| intron-exon | AC019294.2 | 15 | + | LOC101929408 | 15 | + |
| exon-exon | RNA5S7 | 1 | - | RTN3 | 11 | + |
| exon-exon | RNU5B-1 | 15 | + | PHGDH | 1 | + |
| intron-exon | STXBP5L | 3 | - | LOC105374069 | 3 | - |
| exon-exon | DEPP1 | 10 | - | RFC3 | 13 | + |
| intron-exon | MBNL2 | 13 | + | PLP1 | X | + |
| intron-exon | RNR2 | MT | + | LEO1 | 15 | - |
| intron-exon | SHROOM3 | 4 | + | ASAH1 | 8 | - |
| intron-exon | RNR2 | MT | + | FUS | 16 | + |
| exon-exon | ADD3-AS1 | 10 | - | XPNPEP1 | 10 | - |
| intron-exon | LINC00609 | 14 | + | HACD2 | 3 | - |
| exon-exon | RPL15P3 | 6 | + | MX1 | 21 | + |
| intron-exon | GRM5 | 11 | - | SF3A3 | 1 | - |
| exon-exon | RNU1-1 | 1 | - | DDX24 | 14 | - |
| exon-intron | SLC25A5P1 | 22 | - | WBP2NL | 22 | - |
| exon-exon | FAM107B | 10 | - | MXI1 | 10 | + |
| intron-exon | RNA5-8SP10 | 21 | + | COPS2 | 15 | - |
| exon-exon | KDM5A | 12 | - | MBP | 18 | - |
| intron-exon | LOC105376387 | 10 | - | LOC107984203 | 10 | - |
| exon-exon | ZNF776 | 19 | + | APLP2 | 11 | + |
| exon-exon | CREG1 | 1 | - | TMEM144 | 4 | + |
| exon-exon | TMEM107 | 17 | - | MBP | 18 | - |
| exon-exon | ZNF93 | 19 | + | AP2A2 | 11 | + |
| exon-exon | ATL2 | 2 | - | NDRG2 | 14 | - |
| intron-exon | LOC107987075 | 9 | - | LOC105379452 | 9 | - |
| exon-intron | WDR73 | 15 | - | ENG | 9 | - |
| exon-exon | RNA45SN2 | 21 | + | EIF4A2 | 3 | + |
| exon-intron | CCT6P2 | 5 | + | OTULIN | 5 | + |
| exon-intron | LOC105377428 | 4 | - | RP11-789C2.1 | 4 | - |
| exon-exon | RNU2-1 | 17 | - | AMY2B | 1 | + |
| intron-exon | RNR2 | MT | + | ALB | 4 | + |
| intron-exon | AC092674.1 | 4 | - | LOC105377295 | 4 | - |
| exon-intron | RNU6-3P | X | - | LAP3 | 4 | + |
| exon-exon | NMD3 | 3 | + | LOC105374187 | 3 | + |
| intron-exon | AC005077.2 | 7 | - | GTF2IP7 | 7 | - |
| intron-exon | CYP4A11 | 1 | + | CYP4X1 | 1 | + |
| exon-exon | SVIL-AS1 | 10 | + | SVIL | 10 | + |
| exon-intron | IGHV3-30 | 14 | - | IGH | 14 | - |
| exon-exon | H4C12 | 6 | - | BCAT2 | 19 | - |
| intron-exon | LOC112268294 | 22 | - | CYP2D6 | 22 | - |
| intron-exon | RNA5-8SP10 | 21 | + | CRYBG2 | 1 | - |
| exon-exon | SIRT4 | 12 | - | ALB | 4 | + |
| intron-exon | LOC105370449 | 14 | - | ALB | 4 | + |
| intron-exon | NKX1-2 | 10 | + | LHPP | 10 | + |
| exon-exon | RNA45SN1 | 21 | + | CD74 | 5 | - |
| intron-exon | RNU6-9 | 19 | + | CERS4 | 19 | + |
| exon-exon | IGHV4-4 | 14 | - | IGHA1 | 14 | - |
| exon-intron | IGHV3-30 | 14 | - | IGH | 14 | - |
| intron-exon | SEC22B4P | 1 | + | WBP2 | 17 | - |
| exon-intron | IGHV4-59 | 14 | - | IGH | 14 | - |
| exon-exon | BPTF | 17 | + | LRRC37A2 | 17 | + |
| exon-exon | RNVU1-18 | 1 | - | TMBIM1 | 2 | - |
| intron-exon | RPL21 | 13 | + | EEF1A1P12 | 2 | - |
| intron-exon | KLF3 | 4 | - | KLF3-AS1 | 4 | - |
| exon-intron | RAB7A | 3 | + | LOC653712 | 3 | + |
| intron-exon | RYBP | 3 | - | EEF1A1P13 | 5 | - |
| exon-exon | RNU5B-1 | 15 | + | HLA-C | 6 | - |
| exon-exon | RNVU1-18 | 1 | - | EEF1A1 | 6 | - |
| exon-exon | RPLP2 | 11 | + | MED15 | 22 | + |
| exon-intron | BICD1 | 12 | - | AC048344.1 | 12 | - |
| exon-exon | RNU5B-1 | 15 | + | EIF3D | 22 | - |
| intron-exon | IGH | 14 | - | IGHV1-46 | 14 | - |
| exon-exon | ECE1 | 1 | - | CD46 | 1 | + |
| exon-exon | CREB3L2 | 7 | - | IKZF1 | 7 | + |
| intron-exon | PRH1-PRR4 | 12 | - | MRPS25 | 3 | - |
| exon-exon | RNA45SN2 | 21 | + | CCN1 | 1 | + |
| intron-exon | PTPN3 | 9 | + | PALM2AKAP2 | 9 | + |
| intron-exon | CCDC81 | 11 | - | LOC105369421 | 11 | - |
| exon-exon | LOC105370174 | 13 | + | VWA8 | 13 | + |
| exon-intron | TRIL | 7 | + | AC005013.1 | 7 | + |
| exon-exon | LYZ | 12 | + | PSME3IP1 | 16 | - |
| intron-exon | LOC111188164 | 4 | - | ADH1C | 4 | - |
| exon-exon | RNU1-4 | 1 | + | YPEL5 | 2 | + |
| exon-exon | RNA45SN2 | 21 | + | EEF1A1P5 | 9 | + |
| exon-exon | ZNF548 | 19 | + | ZNF17 | 19 | + |
| intron-exon | PRH1-PRR4 | 12 | - | RMDN3 | 15 | - |
| exon-exon | SDCBP | 8 | + | RAB7A | 3 | + |
| exon-exon | RPS18 | 6 | + | MYLK | 3 | - |
| exon-exon | RNA45SN3 | 21 | + | BLCAP | 20 | - |
| exon-intron | RNA45SN2 | 21 | + | ENOSF1 | 18 | - |
| exon-exon | TAPBPL | 12 | + | SON | 21 | + |
| exon-exon | IGLV1-40 | 22 | + | ATP5F1A | 18 | - |
| exon-exon | RNA45SN2 | 21 | + | FMOD | 1 | - |
| exon-exon | RPS8 | 1 | + | CDC42EP3 | 2 | - |
| intron-exon | LOC102723517 | 17 | - | EIF4E | 4 | - |
| exon-exon | HIF1A | 14 | + | PRKCH | 14 | + |
| intron-exon | GORAB-AS1 | 1 | + | GORAB | 1 | + |
| exon-exon | SLC15A4 | 12 | - | ARID1A | 1 | + |
| exon-intron | ZBTB44 | 11 | + | ZBTB44-DT | 11 | + |
| exon-exon | LINC02701 | 11 | - | HSPA1A | 6 | + |
| intron-exon | RNU1-27P | 14 | + | WARS1 | 14 | - |
| exon-exon | CAB39L | 13 | + | SETDB2-PHF11 | 13 | + |
| exon-intron | LYZ | 12 | + | TCF25 | 16 | + |
| intron-exon | PRH1-PRR4 | 12 | - | LTF | 3 | - |
| exon-exon | SEC11C | 18 | + | LTF | 3 | - |
| exon-exon | FAM234A | 16 | - | LOC100129478 | 16 | - |
| exon-exon | HSPA1A | 6 | + | HSPA1B | 6 | + |
| exon-exon | RNA45SN3 | 21 | + | EIF3CL | 16 | - |
| exon-intron | PRSS23 | 11 | + | WWOX | 16 | + |
| exon-exon | ECD | 10 | - | P4HA1 | 10 | - |
| exon-exon | RN7SK | 6 | + | EEF1A1 | 6 | - |
| exon-exon | RNA45SN1 | 21 | + | UBC | 12 | - |
| intron-exon | RNU6-9 | 19 | + | VAMP7 | Y | + |
| intron-exon | AK8 | 9 | + | SPACA9 | 9 | + |
| exon-exon | RNA45SN2 | 21 | + | LIMS2 | 2 | - |
| exon-exon | RNA45SN2 | 21 | + | LYZ | 12 | + |
| exon-exon | ABHD2 | 15 | + | NFX1 | 9 | + |
| exon-exon | LINC00674 | 17 | + | LOC105371871 | 17 | + |
| intron-exon | RNA5-8SP10 | 21 | + | MUC7 | 4 | + |
| intron-exon | LOC101928415 | X | - | PHKA2 | X | - |
| exon-exon | LOC105372310 | 19 | - | ZNF90 | 19 | - |
| exon-intron | LOC107985746 | 1 | - | LINC01348 | 1 | - |
| exon-exon | IST1 | 16 | + | NXF1 | 11 | - |
| intron-exon | HEPACAM2 | | + | VPS50 | 7 | + |
| intron-exon | SNHG1 | 11 | - | LDB3 | 10 | + |
| exon-intron | RNA45SN1 | 21 | + | AC026704.1 | | - |
| exon-exon | RNA45SN2 | 21 | + | FOS | 14 | + |
| intron-exon | ATP5ME | 4 | + | ZNF721 | 4 | - |
| exon-exon | ANKUB1 | 3 | - | ATXN2 | 12 | - |
| intron-exon | GALK2 | 15 | + | GOPC | 6 | - |
| intron-exon | PRH1-PRR4 | 12 | - | MYH11 | 16 | - |
| exon-exon | RPL23 | 17 | - | EDRF1 | 10 | + |
| intron-exon | TXNDC8 | 9 | + | SVEP1 | 9 | + |
| exon-exon | SLTM | 15 | - | C6orf89 | 6 | + |
| exon-exon | GOLPH3L | 1 | - | AKT3 | 1 | - |
| intron-exon | AC137630.1 | 3 | - | ARIH2 | 3 | - |
| intron-exon | LOC105370922 | 15 | - | LOC102724001 | 15 | - |
| exon-exon | THUMPD1 | 16 | - | HERC4 | 10 | - |
| exon-intron | SLPI | 20 | - | PRELID2 | 5 | - |
| exon-exon | MALAT1 | 11 | + | OXR1 | 8 | + |
| exon-exon | LOC100287896 | 11 | + | POLD3 | 11 | + |
| exon-intron | DDX27 | 20 | + | PLXNA2 | 1 | - |
| intron-exon | RNU6-6P | 10 | + | ELMOD3 | 2 | - |
| intron-exon | GRINA | 8 | - | PARP10 | 8 | - |
| exon-exon | RNA5S4 | 1 | - | NT5E | 6 | + |
| intron-exon | SNCAIP | 5 | - | DNAJC10 | 2 | + |
| intron-exon | TXNDC8 | 9 | + | SVEP1 | 9 | + |
| exon-exon | RNA45SN3 | 21 | + | KIAA1143 | 3 | - |
| intron-exon | PRH1-PRR4 | 12 | - | GIGYF2 | 2 | + |
| exon-intron | DDT | 22 | - | MORN5 | 9 | + |
| exon-exon | RPL4 | 15 | - | AACS | 12 | + |
| exon-intron | C1orf198 | 1 | + | LOC101927604 | 1 | + |
| exon-exon | DUSP1 | 5 | - | DENND2B | 11 | - |
| exon-exon | RNA45SN1 | 21 | + | ADIPOR2 | 12 | + |
| exon-intron | LOC541473 | 7 | - | STAG3L1 | 7 | - |
| exon-exon | RNA45SN1 | 21 | + | STAU1 | 20 | - |
| exon-exon | GDAP2 | 1 | + | WDR3 | 1 | + |
| intron-exon | PPP4R3B | 2 | - | AMY2B | 1 | + |
| intron-exon | AC009093.10 | 16 | + | SNX29P2 | 16 | + |
| exon-intron | RNA45SN1 | 21 | + | COA4 | 11 | - |
| intron-exon | PRH1-PRR4 | 12 | - | ULK1 | 12 | + |
| exon-exon | RNA45SN3 | 21 | + | PFKFB3 | 10 | + |
| exon-exon | ATIC | 2 | + | NAB1 | 2 | + |
| intron-exon | AC243967.2 | 19 | - | LOC112268252 | 19 | - |
| exon-exon | ABHD11 | 7 | + | CLDN4 | 7 | + |
| exon-exon | PCNX3 | 11 | - | MAP3K11 | 11 | - |
| intron-exon | LINC01725 | 1 | - | LOC107985037 | 1 | - |
| intron-exon | SRGAP3 | 3 | - | CDK12 | 17 | + |
| exon-exon | RNU1-1 | 1 | - | INPP4B | 4 | - |
| exon-exon | SIRT4 | 12 | - | ZNF585A | 19 | - |
| exon-exon | HIKESHI | 11 | + | PICALM | 11 | - |
| exon-exon | RNA45SN3 | 21 | + | NTN4 | 12 | - |
| exon-exon | RNA45SN2 | 21 | + | DMKN | 19 | - |
| intron-exon | RNR2 | MT | + | STX17 | 9 | + |
| exon-exon | RSRC1 | 3 | + | ATP1A1 | 1 | + |
| intron-exon | AC093495.1 | 3 | + | XPC | 3 | + |
| exon-exon | IGFBP5 | 2 | + | LOC101928278 | 2 | + |
| exon-intron | TJAP1 | 6 | + | GTPBP6 | Y | - |
| exon-exon | CCND3 | 6 | - | LARP4B | 10 | - |
| intron-exon | AC091214.1 | 12 | + | TMTC2 | 12 | + |
| exon-exon | LOC107985840 | 2 | - | BTBD3 | 20 | + |
| intron-exon | PRH1-PRR4 | 12 | - | GALNT7 | 4 | + |
| intron-exon | LOC107985736 | 1 | - | TMEM167A | 5 | - |
| exon-exon | RPL13 | 16 | + | TNFRSF21 | 6 | - |
| exon-intron | HSP90AB3P | 4 | - | MEPE | 4 | - |
| intron-exon | LOC105370449 | 14 | - | KDM5B | 1 | - |
| intron-exon | ACKR2 | 3 | + | ZNF662 | 3 | + |
| exon-intron | RNA45SN1 | 21 | + | ALDH9A1 | 1 | - |
| intron-exon | H2BC18 | 1 | - | NAB1 | 2 | + |
| exon-exon | RNA45SN1 | 21 | + | TRMT13 | 1 | + |
| exon-exon | LYZ | 12 | + | SLC35A3 | 1 | + |
| intron-exon | COX10 | 17 | + | PCGF3 | 4 | + |
| exon-exon | SIRT4 | 12 | - | ELN | 7 | + |
| exon-exon | MEX3A | 1 | - | UBQLN4 | 1 | - |
| exon-exon | MAP3K19 | 2 | - | ARL6 | 3 | + |
| intron-exon | TXNDC8 | 9 | + | SVEP1 | 9 | + |
| intron-exon | AC106798.1 | 5 | - | LOC105379005 | 5 | - |
| exon-exon | LOC107986261 | 4 | - | PROM1 | 4 | - |
| intron-exon | LOC107984760 | 15 | + | SPRED1 | 15 | + |
| exon-exon | PDE4D | 5 | - | SLC16A9 | 10 | - |
| exon-intron | LOC105373186 | X | - | Z93403.1 | X | - |
| exon-exon | BAZ2B | 2 | - | DMTF1 | 7 | + |
| exon-intron | ARF6 | 14 | + | LINC01588 | 14 | + |
| exon-exon | DNAJB1 | 19 | - | CFAP46 | 10 | - |
| exon-exon | ENSA | 1 | - | RASEF | 9 | - |
| exon-exon | RNA45SN2 | 21 | + | PER1 | 17 | - |
| exon-exon | PNRC1 | 6 | + | NRDC | 1 | - |
| exon-exon | CYFIP2 | 5 | + | STK10 | 5 | - |
| exon-exon | SLC12A6 | 15 | - | B4GALT5 | 20 | - |
| exon-exon | RNA45SN2 | 21 | + | CYBRD1 | 2 | + |
| exon-intron | RNA45SN1 | 21 | + | MAGT1 | X | - |
| exon-exon | WDR41 | 5 | - | HMGCR | 5 | + |
| exon-exon | VMP1 | 17 | + | CLTC | 17 | + |
| exon-exon | ANKRD44 | 2 | - | TMEM131 | 2 | - |
| exon-exon | ASAH1 | 8 | - | PCM1 | 8 | + |
| intron-exon | LOC105371693 | 1 | - | LRRN2 | 1 | - |
| exon-exon | MSMB | 10 | - | NCOA4 | 10 | - |
| exon-exon | RNA45SN3 | 21 | + | TMED10 | 14 | - |
| exon-intron | CNBP | 3 | + | COPG1 | 3 | + |
| intron-exon | ZFAS1 | 20 | + | DDX47 | 12 | + |
| exon-exon | CCN2 | 6 | - | RNA45SN3 | 21 | + |
| exon-exon | RNA45SN1 | 21 | + | ZNF717 | 3 | - |
| intron-exon | CCDC200 | 17 | - | VPS50 | 7 | + |
| intron-exon | RNU1-27P | 14 | + | NPAS2 | 2 | + |
| exon-exon | LOC102723675 | 4 | - | CCDC149 | 4 | - |
| intron-exon | GAS5 | 1 | - | DHCR24 | 1 | - |
| intron-exon | RNU6-1011P | 8 | + | SLC25A6 | X | - |
| exon-intron | IGLV3-19 | 22 | + | IGL | 22 | + |
| exon-exon | SYNPO2 | 4 | + | LOC102723967 | 4 | + |
| exon-exon | RNA45SN2 | 21 | + | FKBP10 | 17 | + |
| exon-intron | RNU1-1 | 1 | - | CTDSPL2 | 15 | + |
| intron-exon | TRIM10 | 6 | + | TRIM15 | 6 | + |
| intron-exon | RNU6-6P | 10 | + | ASCC1 | 10 | - |
| exon-exon | RNU5A-1 | 15 | + | EEF1A1 | 6 | - |
| exon-exon | RNU1-2 | 1 | + | SAE1 | 19 | + |
| exon-exon | TCF12 | 15 | + | ATP6V1G2-DDX39B | 6 | - |
| exon-intron | RNA45SN2 | 21 | + | CXADR | 21 | + |
| intron-exon | TPM2 | 9 | - | ECHDC2 | 1 | - |
| exon-exon | ANKAR | 2 | + | OSGEPL1-AS1 | 2 | + |
| exon-exon | RPL17 | 18 | - | NUCB1 | 19 | + |
| exon-exon | RNA45SN3 | 21 | + | VIM | 10 | + |
| exon-intron | EPDR1 | 7 | + | LOC105375236 | 7 | + |
| exon-exon | LOC105377677 | 5 | - | LOC107986466 | 5 | - |
| exon-exon | RN7SK | 6 | + | EEF1A1 | 6 | - |
| exon-exon | RNA45SN3 | 21 | + | FOS | 14 | + |
| exon-exon | SCARA3 | 8 | + | LOC107986934 | 8 | + |
| intron-exon | SCAPER | 15 | - | NEPRO | 3 | - |
| exon-exon | RNA45SN3 | 21 | + | CCN1 | 1 | + |
| exon-intron | GAS2 | 11 | + | AC006299.1 | 11 | + |
| intron-exon | LOC107985736 | 1 | - | RPL10 | X | + |
| exon-exon | RPL28 | 19 | + | C22orf23 | 22 | + |
| exon-exon | SIRT4 | 12 | - | WSB1 | 17 | + |
| intron-exon | SLC8A1 | 2 | - | RAB6A | 11 | - |
| exon-exon | TMBIM6 | 12 | + | SYNJ2BP-COX16 | 14 | - |
| exon-exon | LOC107986421 | 5 | - | LOC105379016 | 5 | - |
| exon-exon | LOC105378230 | 5 | - | CCDC69 | 5 | - |
| exon-exon | LRP10 | 14 | + | RNA45SN1 | 21 | + |
| exon-exon | FOS | 14 | + | LGALS3BP | 17 | - |
| exon-exon | NFIC | 19 | + | TPP1 | 11 | - |
| exon-exon | AQR | 15 | - | FARSB | 2 | - |
| exon-exon | SORBS1 | 10 | - | SPOP | 17 | - |
| exon-intron | CLMAT3 | 5 | - | SPARC | 5 | - |
| intron-exon | RNR2 | MT | + | RPL22 | 1 | - |
| exon-exon | MDC1 | 6 | - | NRM | 6 | - |
| exon-exon | PRNP | 20 | + | NUMBL | 19 | - |
| exon-intron | TIMP1 | X | + | ADAMTS2 | 5 | - |
| exon-intron | SOCS2 | 12 | - | SOCS2-AS1 | 12 | - |
| exon-exon | TENT5A | 6 | - | MED15 | 22 | + |
| exon-exon | RNU1-1 | 1 | - | DDX5 | 17 | - |
| exon-exon | OAZ1 | 19 | + | ULK2 | 17 | - |
| exon-intron | LOC112267908 | 3 | + | ENPP7P4 | 3 | + |
| exon-intron | LOC112268279 | 21 | + | LOC105372759 | 21 | + |
| exon-exon | ARMCX6 | X | - | ARMCX4 | X | + |
| exon-exon | RNA45SN1 | 21 | + | PSMC2 | 7 | + |
| exon-intron | TBC1D22A | 22 | + | TSPAN4 | 11 | + |
| exon-intron | LOC105373584 | 2 | + | AC012363.2 | 2 | + |
| exon-exon | RNA45SN1 | 21 | + | UBC | 12 | - |
| exon-intron | RNA45SN2 | 21 | + | CARMN | 5 | + |
| exon-exon | VRK1 | 14 | + | RBMX | X | - |
| exon-exon | RNA45SN1 | 21 | + | MALAT1 | 11 | + |
| exon-exon | COL3A1 | 2 | + | AHNAK | 11 | - |
| exon-exon | MYH11 | 16 | - | SDC3 | 1 | - |
| exon-exon | RPL31 | 2 | + | MYLK | 3 | - |
| exon-intron | ZBTB25 | 14 | - | CEP83 | 12 | - |
| exon-exon | ELN | 7 | + | SYNC | 1 | - |
| exon-exon | PABPC1 | 8 | - | MTMR14 | 3 | + |
| exon-intron | LOC107986822 | 7 | - | PON3 | 7 | - |
| intron-exon | AGAP1 | 2 | + | CRTAP | 3 | + |
| exon-exon | RNA45SN2 | 21 | + | PRKCSH | 19 | + |
| intron-exon | RNU6-6P | 10 | + | MYH11 | 16 | - |
| exon-exon | RNA45SN2 | 21 | + | HLA-C | 6 | - |
| intron-exon | GAS5 | 1 | - | TOMM34 | 20 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | RNU6-2 | 19 | + | WARS1 | 14 | - |
| intron-exon | SIAH2-AS1 | 3 | + | CLRN1-AS1 | 3 | + |
| intron-exon | RPL13 | 16 | + | CAVIN1 | 17 | - |
| intron-exon | HNF1A | 12 | - | HNF1A-AS1 | 12 | - |
| intron-exon | TBX18 | 6 | + | RCAN2 | 6 | - |
| exon-exon | RNA45SN1 | 21 | + | RBBP7 | X | - |
| exon-exon | ENSA | 1 | - | MAPK14 | 6 | + |
| exon-exon | CAVIN1 | 17 | - | TSC22D3 | X | - |
| intron-exon | SIAH2-AS1 | 3 | + | CLRN1-AS1 | 3 | + |
| exon-exon | CDC25B | 20 | + | CTSB | 8 | - |
| exon-exon | FXYD1 | 19 | + | FXYD7 | 19 | + |
| intron-exon | FAM9B | X | - | BRK1P1 | X | - |
| exon-intron | ARHGEF25 | 12 | + | LOC101927583 | 12 | + |
| exon-exon | EPS8L1 | 19 | + | GVQW3 | 11 | + |
| exon-intron | RNU6-9 | 19 | + | SPEG | 2 | + |
| intron-exon | TMEM59 | 1 | + | TCEANC2 | 1 | + |
| exon-exon | LINC00680-GUSBP4 | 6 | - | ITGA8 | 10 | - |
| exon-exon | PNRC1 | 6 | + | PM20D2 | 6 | + |
| intron-exon | FBXO16 | 8 | - | ZNF395 | 8 | - |
| exon-exon | LOC107987095 | 9 | + | STXBP1 | 9 | + |
| exon-exon | CNN2 | 19 | + | SSU72 | 1 | - |
| exon-exon | LINC02773 | | - | DDX21 | 10 | + |
| exon-exon | TCF21 | 6 | - | TARID | 6 | - |
| intron-exon | TINAGL1 | 1 | - | LOC105378626 | 1 | - |
| intron-exon | RNA5-8SP10 | 21 | + | PHF10 | 6 | - |
| intron-exon | ZRANB2-AS2 | 1 | + | NEGR1 | 1 | + |
| exon-intron | LINC01311 | 22 | + | CLTCL1 | 22 | + |
| exon-exon | RNA45SN2 | 21 | + | MED13L | 12 | - |
| intron-exon | LINC01484 | 5 | - | LOC107984118 | 5 | - |
| exon-exon | FLNA | X | - | ATP13A1 | 19 | - |
| exon-intron | LOC107986022 | 3 | - | AC092691.1 | 3 | - |
| exon-intron | TIMM10B | 11 | + | AC084337.2 | 11 | + |
| exon-intron | TMEM107 | 17 | - | MYL9 | 20 | + |
| exon-exon | EMX2OS | 10 | - | ZBTB4 | 17 | - |
| intron-exon | RNA5-8SP10 | 21 | + | GOLGA8A | 15 | - |
| exon-exon | MAG | 19 | + | CD22 | 19 | + |
| intron-exon | EXOC4 | 7 | + | ATE1 | 10 | - |
| exon-intron | RNU6-1 | 15 | - | SPEG | 2 | + |
| exon-exon | MYH10 | 17 | + | MYH10 | 17 | - |
| exon-exon | LOC107986838 | 7 | - | FAM13B | 5 | - |
| intron-exon | RNA5-8SP10 | 21 | + | EDNRA | 4 | + |
| exon-intron | LOC102724238 | 9 | - | LOC105379263 | 9 | - |
| exon-exon | ABCA1 | 9 | - | KCNMA1 | 10 | - |
| exon-exon | RNA45SN3 | 21 | + | CA5B | X | + |
| exon-exon | CYP1B1 | 2 | + | CYP1B1-AS1 | 2 | + |
| exon-intron | RNA45SN3 | 21 | + | GGA2 | 16 | - |
| intron-exon | MATN1 | 1 | + | MATN1-AS1 | 1 | + |
| exon-exon | EEF1A1P6 | 7 | - | MRAS | 3 | + |
| intron-exon | LINC01232 | 13 | + | LINC00449 | 13 | + |
| exon-exon | RNU6ATAC | 9 | - | CADPS2 | 7 | - |
| intron-exon | FAM120B | 6 | - | TIMP1 | X | + |
| intron-exon | ZNF254 | 19 | + | MYH11 | 16 | - |
| exon-intron | CDK5RAP1 | 20 | + | SNTA1 | 20 | + |
| exon-intron | LINC01969 | 17 | - | AC015909.4 | 17 | - |
| intron-exon | C1QTNF6 | 22 | - | IL2RB | 22 | - |
| exon-exon | TMED3 | 15 | + | ANGPT2 | 8 | - |
| exon-exon | RNA45SN3 | 21 | + | TEX261 | 2 | - |
| intron-exon | RNR2 | MT | + | PRPF38B | 1 | + |
| intron-exon | CCDC200 | 17 | - | ROBO4 | 11 | - |
| exon-exon | FAM174B | 15 | - | ABL2 | 1 | - |
| intron-exon | DNAAF4-CCPG1 | 15 | - | NAT10 | 11 | + |
| exon-exon | USP48 | 1 | - | ZNF317 | 19 | + |
| exon-exon | ACTG1 | 17 | - | NLE1 | 17 | - |
| exon-exon | REST | 4 | + | SART3 | 12 | - |
| intron-exon | SOX2-OT | 3 | + | HDAC6 | X | + |
| exon-intron | RNA45SN3 | 21 | + | SNHG27 | 4 | + |
| exon-exon | TRD-GTC2-1 | 1 | - | TUBA1A | 12 | - |
| exon-intron | RPL21P16 | 10 | - | RNR2 | MT | + |
| exon-exon | RNA45SN3 | 21 | + | MDH2 | 7 | + |
| exon-exon | COX1 | MT | + | GSS | 20 | - |
| exon-intron | SRP72 | 4 | + | RNR2 | MT | + |
| intron-exon | LINC00624 | 1 | - | RPLP0 | 12 | - |
| exon-exon | CLASP1 | 2 | - | EEF1A1 | 6 | - |
| exon-exon | OXSM | 3 | + | EEF1A1P5 | 9 | + |
| exon-exon | RPL13A | 19 | + | FDXR | 17 | - |
| exon-intron | PHPT1 | 9 | - | DLK1 | 14 | - |
| exon-exon | TMEM179B | 11 | - | CCSER2 | 10 | - |
| exon-exon | ND1 | MT | - | CDH12 | 5 | + |
| intron-exon | AL020996.2 | 1 | + | MTFR1L | 1 | + |
| exon-intron | TRIM74 | 7 | + | MTCL1 | 18 | - |
| exon-exon | RPS15A | 16 | + | CDR1 | X | - |
| intron-exon | LOC107984384 | 11 | - | NSD1 | 5 | - |
| exon-exon | RPL41 | 12 | - | STAG2 | X | - |
| exon-intron | DIRAS2 | 9 | + | COMMD1 | 2 | - |
| exon-exon | PTGIR | 19 | - | CALM3 | 19 | - |
| exon-intron | ND1 | MT | - | DDX3P1 | X | + |
| intron-exon | IL3RA | Y | + | LOC100128340 | 5 | - |
| exon-exon | LRRN4 | 20 | - | CRLS1 | 20 | - |
| exon-intron | NDRG3 | 20 | + | LMTK2 | 7 | - |
| exon-intron | FLJ42627 | 16 | - | PDPK2P | 16 | - |
| exon-intron | EMG1 | 12 | + | SNF8 | 17 | - |
| intron-exon | AC106795.3 | 5 | - | LOC100128340 | 5 | - |
| exon-exon | STARD5 | 15 | - | IL16 | 15 | - |
| exon-exon | CATSPER2 | 15 | + | PPIP5K1P1 | 15 | + |
| intron-exon | DAAM1 | 14 | + | GPR135 | 14 | + |
| exon-exon | SST | 3 | + | ANKRD52 | 12 | + |
| exon-exon | ATP6 | MT | - | MIDEAS | 14 | + |
| exon-exon | C1QTNF5 | 11 | + | MFRP | 11 | + |
| exon-intron | TRIM39-RPP21 | 6 | - | INTS4 | 11 | + |
| intron-exon | ND5 | MT | - | NBPF11 | 1 | + |
| exon-exon | LIMD2 | 17 | - | MAP3K3 | 17 | - |
| intron-exon | BMS1P20 | 22 | - | RNF144A | 2 | - |
| exon-intron | FGD4 | 12 | - | VPS13D | 1 | - |
| exon-intron | ND2 | MT | - | SARDH | 9 | - |
| exon-intron | COX3 | MT | - | XKR6 | 8 | + |
| exon-intron | C1orf61 | 1 | + | LINC02473 | 4 | - |
| intron-exon | KCNK1 | 1 | - | MAP3K21 | 1 | - |
| exon-intron | ZBTB7A | 19 | + | UBAC2 | 13 | - |
| intron-exon | PRKAR1A | 17 | - | CDR1 | X | - |
| exon-intron | BRK1 | 3 | - | SUSD6 | 14 | - |
| exon-intron | ARRB2 | 17 | - | DYM | 18 | + |
| exon-intron | POR | 7 | - | LOXL2 | 8 | + |
| exon-exon | CDC23 | 5 | + | C3orf62 | 3 | + |
| exon-intron | COX2 | MT | - | C16orf72 | 16 | - |
| exon-exon | LOC112268179 | 16 | - | SPIRE2 | 16 | - |
| intron-exon | EPCAM-DT | 2 | - | NRP1 | 10 | + |
| exon-intron | TTC37 | 5 | + | RBPMS | 8 | - |
| exon-intron | NWD1 | 19 | - | ENTPD5 | 14 | + |
| exon-intron | UAP1L1 | 9 | - | PPP1R12B | 1 | - |
| exon-intron | SETD6 | 16 | + | CTIF | 18 | - |
| exon-exon | ATP6 | MT | - | OGFRL1 | 6 | - |
| exon-exon | SUZ12P1 | 17 | - | SREBF1 | 17 | + |
| exon-intron | SNX21 | 20 | + | CNTN4 | 3 | - |
| exon-exon | HNRNPDL | 4 | + | UNC13C | 15 | - |
| exon-intron | CNTN1 | 12 | - | TNKS | 8 | - |
| exon-intron | SNHG9 | 16 | - | NPIPB5 | 16 | - |
| exon-intron | PEG10 | 7 | - | KIFC3 | 16 | + |
| exon-exon | ND4 | MT | - | SYT2 | 1 | + |
| intron-exon | LOC105374347 | 4 | - | SERINC1 | 6 | + |
| exon-intron | SLIRP | 14 | - | RAP2C | X | + |
| intron-exon | AL360015.1 | 6 | - | LOC107986636 | 6 | - |
| intron-exon | FRYL | 4 | + | ZAR1 | 4 | + |
| exon-intron | LGALS3 | 14 | - | LRBA | 4 | + |
| exon-exon | LOC100129358 | 22 | + | DDTL | 22 | + |
| exon-exon | S100A11 | 1 | + | TNKS2 | 10 | - |
| exon-intron | TMSB4X | X | - | RP11-90J7.3 | 10 | - |
| exon-intron | RPL26 | 17 | + | PTPRC | 1 | - |
| exon-exon | HLA-A | 6 | - | CD300LB | 17 | + |
| intron-exon | AP3S2 | 15 | + | ARPIN | 15 | + |
| exon-intron | MIR12136 | 1 | - | MACF1 | 1 | - |
| intron-exon | RUNDC1 | 17 | + | KDM1B | 6 | - |
| exon-intron | SLX4 | 16 | + | H1-10-AS1 | 3 | - |
| exon-exon | NEUROD2 | 17 | + | NLRP14 | 11 | - |
| intron-exon | LOC105369760 | 12 | + | TUBA1A | 12 | + |
| exon-intron | SEPTIN14P13 | 1 | + | OR4F16 | 1 | + |
| intron-exon | LOC107985034 | 17 | + | RFX7 | 15 | + |
| exon-intron | FBL | 19 | + | LOC107985664 | X | + |
| exon-exon | RPL41 | 12 | - | ADGRL3 | 4 | - |
| intron-exon | NPIPB9 | 16 | - | NPIPB8 | 16 | - |
| exon-intron | ND2 | MT | - | CXADR | 21 | - |
| exon-intron | ND4 | MT | - | FRMPD4 | X | - |
| exon-intron | EPHA5-AS1 | 4 | - | ZNF713 | 7 | - |
| exon-exon | SFPQ | 1 | + | LOC645513 | | - |
| exon-intron | GNB1 | 1 | + | PRKN | 6 | + |
| exon-exon | RPL6 | 12 | + | YLPM1 | 14 | - |
| exon-intron | COX3 | MT | - | ZNF664 | 12 | - |
| exon-exon | LOC112268127 | 14 | - | SERPINA5 | 14 | - |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| intron-exon | AL355574.1 | 9 | - | LOC107987141 | 9 | - |
| exon-exon | COX4I1 | 16 | - | COX1 | MT | - |
| exon-intron | DDIT3 | 12 | - | MARS1 | 12 | - |
| exon-intron | U2AF1 | 21 | + | PTBP2 | 1 | - |
| intron-exon | MTND2P28 | 1 | - | FAM149B1 | 10 | + |
| exon-exon | PSMC5 | 17 | - | ALDH4A1 | 1 | + |
| exon-exon | SET | 9 | - | ZEB1 | 10 | - |
| exon-exon | TMEM200B | 1 | - | EPB41 | 1 | - |
| exon-exon | CCR10 | 17 | - | RUNX1 | 21 | + |
| exon-exon | ATP6 | MT | - | PHC3 | 3 | + |
| exon-exon | UROS | 10 | + | UROS | 10 | - |
| exon-intron | COX3 | MT | - | INTS9 | 8 | + |
| intron-exon | MIR3681HG | 2 | - | LPIN1 | 2 | - |
| exon-intron | DYSF | 2 | - | ARHGAP30 | 1 | + |
| exon-exon | ARPIN-AP3S2 | 15 | - | LOC105370965 | 15 | - |
| exon-intron | ZBTB18 | 1 | - | TENM2 | 5 | - |
| intron-exon | KIF28P | 1 | - | LINC01341 | 1 | - |
| exon-intron | ND4 | MT | - | AC105393.1 | 2 | + |
| intron-exon | COX1 | MT | - | PRXL2A | 10 | + |
| exon-exon | PCIF1 | 20 | - | LMNB1 | 5 | - |
| exon-exon | TRIM25 | 17 | + | SMCR8 | 17 | - |
| exon-exon | KRT4 | 12 | + | S100A9 | 1 | - |
| exon-intron | CRK | 17 | + | TFIP11 | 22 | - |
| intron-exon | LOC101929200 | 5 | - | ADAMTS16 | 5 | - |
| exon-intron | ATAD2B | 2 | + | XKR4 | 8 | - |
| intron-exon | DTWD2 | 5 | - | NIPA1 | 15 | - |
| exon-intron | MRPL20 | 1 | + | PDE7A | 8 | + |
| exon-exon | NCBP2 | 3 | - | SENP5 | 3 | - |
| exon-exon | AMYP1 | 1 | - | AMY2B | 1 | - |
| exon-intron | SLC2A11 | 22 | - | PCDH1 | 5 | + |
| exon-exon | ATP8 | MT | - | PIP5K1A | 1 | - |
| exon-intron | RPL41 | 12 | - | TANC2 | 17 | - |
| intron-exon | LOC105376615 | 11 | - | QSER1 | 11 | - |
| intron-exon | IGH | 14 | + | IGHA1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHA2 | 14 | + |
| exon-exon | RACK1 | 5 | + | CTNNB1 | 3 | - |
| exon-exon | ATP6 | MT | - | HMBOX1 | 8 | - |
| intron-exon | AL390195.1 | 1 | + | WDR77 | 1 | + |
| exon-intron | RPS29 | 14 | + | HNRNPH1 | 5 | + |
| exon-intron | CYTB | MT | - | CUL4A | 13 | - |
| exon-intron | CD37 | 19 | - | MIR29B2CHG | 1 | + |
| intron-exon | ANKDD1A | 15 | + | NAP1L1 | 12 | + |
| exon-intron | MMP23B | 1 | + | KATNIP | 16 | - |
| exon-intron | CNN2 | 19 | - | COA1 | 7 | + |
| exon-intron | BLOC1S6 | 15 | - | PICALM | 11 | + |
| exon-exon | GDPD5 | 11 | + | CDK11B | 1 | + |
| exon-exon | LOC100996842 | 17 | - | CD68 | 17 | - |
| exon-intron | COX3 | MT | - | LIPE-AS1 | 19 | - |
| intron-exon | AC073578.2 | 12 | + | LOC101929974 | 12 | + |
| exon-exon | LOC105378539 | 10 | + | TIGAR | 12 | - |
| intron-exon | DPM1 | 20 | - | TANGO2 | 22 | - |
| intron-exon | AL137026.1 | 10 | + | CXCL12 | 10 | + |
| exon-exon | LOC105370121 | 13 | + | MTMR6 | 13 | + |
| exon-exon | CD81 | 11 | - | PAXBP1 | 21 | + |
| intron-exon | FAM230G | 22 | - | KIAA1210 | X | + |
| exon-exon | CNTF | 11 | - | ZFP91 | 11 | - |
| exon-intron | COX3 | MT | - | LOC105375746 | 8 | - |
| exon-exon | ATP8 | MT | - | SMOC1 | 14 | - |
| intron-exon | LOC100128993 | 8 | + | GNAI2 | 3 | - |
| intron-exon | AC018978.1 | 10 | - | LOC105376375 | 10 | - |
| intron-exon | PLXDC2 | 10 | - | MALRD1 | 10 | - |
| intron-exon | RAB5A | 3 | + | CLASP1 | 2 | + |
| intron-exon | AC094108.1 | 5 | - | SLCO6A1 | 5 | - |
| exon-exon | LOC105374645 | 5 | + | TTC23L | 5 | - |
| exon-intron | ESF1 | 20 | + | NDUFAF5 | 20 | + |
| intron-exon | AL117339.5 | 10 | - | CCNYL4 | 10 | - |
| exon-exon | RNPC3 | 1 | - | LOC105370831 | 15 | + |
| intron-exon | AC108052.1 | 4 | - | PRKXP1 | 15 | + |
| exon-intron | FBXL15 | 10 | - | PSD | 10 | - |
| exon-intron | RAB24 | 5 | + | LINC02034 | 3 | - |
| exon-exon | LSS | 21 | - | SPATC1L | 21 | - |
| exon-intron | GRHL1 | 2 | + | AC010969.1 | 2 | + |
| intron-exon | AC094105.2 | 5 | - | LOC107984098 | 5 | - |
| exon-exon | LOC102724159 | 21 | + | IFT140 | 16 | + |
| exon-intron | TOR1AIP2 | 1 | + | PTPN9 | 15 | - |
| exon-intron | PPIA | 7 | - | MAML3 | 4 | + |
| exon-intron | SLC12A9 | 7 | - | MYPOP | 19 | + |
| intron-exon | AL683807.1 | X | - | LOC105373105 | X | - |
| exon-exon | HLA-DRB5 | 6 | + | DTX3L | 3 | - |
| intron-exon | MRNIP | 5 | - | SQSTM1 | 5 | - |
| exon-exon | LASP1 | 17 | - | MTMR1 | X | - |
| intron-exon | LOC106736469 | 15 | + | VAMP1 | 12 | - |
| exon-exon | HLA-B | 6 | + | CAMK4 | 5 | - |
| exon-intron | LOC105378626 | 1 | - | LINC01226 | 1 | - |
| exon-intron | LINC01128 | 1 | - | TTC3 | 21 | - |
| exon-intron | LOC107987300 | 21 | - | LOC102724701 | 21 | - |
| exon-intron | FBRSL1 | 12 | - | GNAO1 | 16 | - |
| intron-exon | LOC105372383 | 19 | - | PROSER3 | 19 | - |
| exon-intron | MAN2C1 | 15 | + | CORO2A | 9 | + |
| exon-intron | LOC100505942 | 16 | + | RIPOR1 | 16 | + |
| exon-intron | DUSP11 | 2 | + | RMND5A | 2 | - |
| exon-intron | RPS9 | 19 | - | CALU | 7 | - |
| intron-exon | VAV1 | 19 | - | LOC101928331 | 6 | + |
| exon-intron | ND3 | MT | - | FIGN | 2 | + |
| exon-intron | PNO1 | 2 | - | ITPKB | 1 | + |
| exon-intron | ND3 | MT | - | PCDH9 | 13 | + |
| exon-exon | COX3 | MT | - | SORBS1 | 10 | + |
| exon-intron | ATP6 | MT | - | GPR158 | 10 | - |
| intron-exon | IGH | 14 | + | IGHA2 | 14 | + |
| exon-intron | ALDH3A1 | 17 | + | LOC105369225 | 17 | + |
| exon-intron | LYZ | 12 | - | AFF1 | 4 | - |
| exon-intron | LYZ | 12 | - | TMEM63A | 1 | + |
| exon-intron | DMBT1 | 10 | - | PCCA | 13 | - |
| exon-intron | PRH1-PRR4 | 12 | + | TLK1 | 2 | + |
| intron-exon | FAAP20 | 1 | + | LOC112268219 | 1 | + |
| exon-exon | HACL1 | 3 | + | LRPPRC | 2 | + |
| exon-intron | ATP6 | MT | - | NCK1 | 3 | - |
| exon-intron | NXPE3 | 3 | - | MAN1C1 | 1 | - |
| intron-exon | CCNT2 | 2 | + | MAP3K19 | 2 | + |
| exon-intron | ND2 | MT | - | ZEB1 | 10 | - |
| exon-intron | MRPL4 | 19 | - | AOPEP | 9 | - |
| exon-exon | ITGA1 | 5 | - | DMAC2L | 14 | + |
| exon-intron | TAF11 | 6 | + | ZNF76 | 6 | + |
| exon-intron | RPL34 | 4 | - | AFF3 | 2 | + |
| exon-exon | SEMA3F-AS1 | 3 | - | LOC102723769 | 22 | + |
| exon-intron | HNRNPK | 9 | + | ZBTB16 | 11 | - |
| exon-intron | LOC105374137 | 3 | - | AC018450.1 | 3 | - |
| exon-intron | SLMO2-ATP5E | 20 | + | HBS1L | 6 | + |
| exon-intron | ATP6 | MT | - | KDM2A | 11 | - |
| intron-exon | GPR62 | 3 | + | PCBP4 | 3 | + |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| intron-exon | AL390195.1 | 1 | + | WDR77 | 1 | + |
| exon-exon | HSPA1B | 6 | - | HSPA1A | 6 | - |
| exon-exon | POU3F3 | 2 | - | CLIC4 | 1 | - |
| exon-intron | RPSAP58 | 19 | - | GALNTL6 | 4 | - |
| exon-intron | KIDINS220 | 2 | + | ST6GALNAC3 | 1 | - |
| exon-exon | RPLP2 | 11 | - | BOD1L1 | 4 | + |
| exon-exon | RNA45SN1 | 21 | - | PLD3 | 19 | - |
| intron-exon | PLEKHA7 | 11 | + | RNA45SN1 | 21 | - |
| exon-exon | COX7A2L | 2 | + | AGAP1 | 2 | - |
| exon-exon | HS3ST1 | 4 | + | RNF145 | 5 | + |
| exon-exon | EEF1A1 | 6 | + | EEF1A1P6 | 7 | + |
| intron-exon | RPL36A-HNRNPH2 | X | - | RNA45SN2 | 21 | - |
| exon-exon | GNB1 | 1 | + | CCND1 | 11 | - |
| exon-exon | SRP68 | 17 | + | RNA45SN3 | 21 | - |
| exon-intron | FAHD1 | 16 | - | CENPE | 4 | + |
| exon-intron | RPL31 | 2 | - | BOD1L1 | 4 | + |
| intron-exon | C4orf51 | 4 | + | RNA45SN3 | 21 | - |
| intron-exon | LOC105375817 | 8 | - | ADCY1 | 7 | - |
| exon-exon | GLIS1 | 1 | + | RNA45SN2 | 21 | - |
| intron-exon | MTND1P23 | 1 | - | RAPGEF6 | 5 | + |
| exon-intron | HNRNPA1 | 12 | - | PCNX2 | 1 | + |
| exon-exon | SUMO2 | 17 | + | PPP1R2 | 3 | + |
| intron-exon | ITFG1 | 16 | + | LOC101927080 | 16 | + |
| intron-exon | BNIP3L | 8 | - | LOC105379337 | 8 | - |
| exon-intron | KLF6 | 10 | + | SHPRH | 6 | + |
| intron-exon | TTLL9 | 20 | + | CTNNB1 | 3 | - |
| intron-exon | XRCC6 | 22 | + | CCDC134 | 22 | + |
| intron-exon | SLC47A1P1 | 17 | - | SYNDIG1L | 14 | + |
| exon-exon | RPS29 | 14 | + | CUTALP | 9 | - |
| intron-exon | LOC100996643 | 9 | + | RNA45SN2 | 21 | - |
| intron-exon | IGH | 14 | + | IGHA1 | 14 | + |
| exon-intron | RFWD3 | 16 | + | CRTC1 | 19 | + |
| exon-exon | PRC1 | 15 | + | PRC1-AS1 | 15 | + |
| exon-exon | RPS27 | 1 | - | LIN28A | 1 | - |
| exon-exon | RPL13A | 19 | - | EARS2 | 16 | + |
| exon-exon | RPS3A | 4 | - | DPH5 | 1 | - |
| intron-exon | BOLA1 | 1 | + | SV2A | 1 | + |
| exon-intron | CHD4 | 12 | + | LOC112163626 | 12 | + |
| exon-exon | ST3GAL2 | 16 | - | DDX19A | 16 | - |
| intron-exon | TRHDE | 12 | - | TPH2 | 12 | - |
| exon-exon | DBP | 19 | - | SPHK2 | 19 | - |
| exon-exon | PHF13 | 1 | - | CAND1 | 12 | - |
| exon-intron | NCL | 2 | + | LOC114004369 | 2 | + |
| exon-exon | DNAH7 | 2 | - | SLC39A10 | 2 | - |
| exon-intron | ZNF362 | 1 | + | ZNF362 | 1 | - |
| exon-exon | TUBA1B | 12 | + | ZDHHC2 | 8 | + |
| exon-intron | ND4 | MT | - | ZNF565 | 19 | - |
| exon-intron | COX3 | MT | - | RNR2 | MT | - |
| exon-exon | JOSD1 | 22 | - | TOMM22 | 22 | - |
| intron-exon | LOC105377043 | 3 | - | NCKAP1 | 2 | + |
| exon-exon | ND3 | MT | - | ND4 | MT | - |
| exon-exon | COL6A1 | 21 | - | AQP7 | | + |
| exon-exon | CFB | 6 | - | RNA45SN1 | 21 | - |
| exon-exon | KLHDC3 | 6 | - | HLA-E | 6 | - |
| intron-exon | LOC440895 | | - | RNA45SN3 | 21 | - |
| exon-intron | FLRT2 | 14 | - | SINHCAF | 12 | + |
| exon-exon | CALR | 19 | - | RNA45SN1 | 21 | - |
| exon-exon | LINC02593 | | + | LOC107985728 | 1 | + |
| exon-exon | H1-0 | 22 | - | LYPLA1 | 8 | + |
| exon-intron | FXR2 | 17 | - | MPDU1 | 17 | - |
| exon-exon | S100A6 | 1 | + | PRPF8 | 17 | + |
| exon-intron | CDH12P3 | 5 | + | LOC105369228 | 5 | - |
| exon-exon | CYTB | MT | - | RPRD1A | 18 | + |
| exon-exon | TUBA1B | 12 | + | TUBA1A | 12 | + |
| intron-exon | LOC107985500 | 21 | - | IGSF5 | 21 | - |
| exon-intron | CD59 | 11 | + | XPA | 9 | - |
| exon-exon | LOC100996842 | 17 | - | CD68 | 17 | - |
| exon-exon | PSG4 | 19 | + | LOC284344 | 19 | + |
| exon-exon | PSG4 | 19 | + | LOC284344 | 19 | + |
| exon-exon | PSG6 | 19 | + | PSG11 | 19 | + |
| exon-intron | CSH1 | 17 | + | GH-LCR | 17 | + |
| exon-intron | CSH1 | 17 | + | EXOC6B | 2 | + |
| exon-exon | YPEL1 | 22 | - | PPIL2 | 22 | - |
| exon-exon | CHEK1 | 11 | - | STT3A | 11 | - |
| exon-exon | PSG4 | 19 | + | LOC284344 | 19 | + |
| intron-exon | AC139795.2 | 5 | + | LOC202181 | 5 | + |
| exon-intron | DEGS1 | 1 | - | TOB2 | 22 | + |
| exon-exon | PSG2 | 19 | + | LOC107985349 | 19 | + |
| exon-intron | CSH1 | 17 | + | PRLR | 5 | + |
| exon-exon | HBG2 | 11 | + | AHNAK | 11 | + |
| exon-exon | PAPPA-AS1 | 9 | - | PAPPA | 9 | - |
| exon-exon | PAPPA-AS1 | 9 | - | PAPPA | 9 | - |
| exon-intron | LOC260422 | 4 | - | C4orf36 | 4 | - |
| intron-exon | SLA | 8 | - | TG | 8 | - |
| exon-exon | NFIB | 9 | + | KIF13B | 8 | + |
| intron-exon | LOC102723945 | 16 | - | ADGRG1 | 16 | - |
| intron-exon | LOC102724843 | 21 | + | RNA45SN3 | 21 | - |
| exon-exon | ND4 | MT | - | DDX3X | X | - |
| exon-exon | TUSC3 | 8 | - | RNA45SN3 | 21 | - |
| exon-exon | MROH8 | 20 | + | RPN2 | 20 | + |
| exon-exon | SLC66A1L | 3 | + | VEPH1 | 3 | - |
| exon-exon | MRPS25 | 3 | - | MDC1 | 6 | - |
| intron-exon | LOC112267901 | 4 | + | PMPCB | 7 | + |
| exon-exon | FSIP2-AS2 | 2 | - | THOC5 | 22 | - |
| exon-intron | KLK5 | 19 | + | AC011483.2 | 19 | + |
| exon-intron | BIRC5 | 17 | + | SPDYA | 2 | + |
| intron-exon | AC005722.4 | 17 | + | ALDH3A1 | 17 | + |
| exon-exon | FGD4 | 12 | + | TTC39B | 9 | - |
| intron-exon | AC090457.1 | 18 | - | LOC105372203 | 18 | - |
| intron-exon | TTLL6 | 17 | + | LOC105371813 | 17 | + |
| exon-exon | CYRIB | 8 | - | CUL2 | 10 | - |
| exon-intron | LOC105372574 | 20 | + | AL591074.2 | 20 | + |
| intron-exon | FAM225B | 9 | + | FAM225A | 9 | + |
| intron-exon | BX119904.2 | X | - | LOC100506955 | X | - |
| exon-exon | TTTY22 | Y | + | LOC107987342 | Y | + |
| exon-exon | COMMD6 | 13 | - | DNAH14 | 1 | + |
| intron-exon | TUFM | 16 | + | INTS4 | 11 | - |
| exon-exon | LOC102723430 | 3 | + | LOC107986114 | | + |
| exon-exon | ARPC2 | 2 | - | LOC101928487 | 2 | - |
| exon-intron | ROMO1 | 20 | + | MIR4422HG | 1 | + |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| intron-exon | MAP4K5 | 14 | + | ATL1 | 14 | + |
| exon-exon | SMAGP | 12 | - | GTPBP2 | 6 | - |
| intron-exon | EXOSC1 | 10 | + | ZDHHC16 | 10 | + |
| exon-exon | LOC107985946 | 2 | - | R3HDM1 | 2 | - |
| exon-exon | MGME1 | 20 | - | SNX5 | 20 | - |
| intron-exon | AC090621.1 | 18 | + | LOC105372155 | 18 | + |
| exon-exon | LOC105370192 | 13 | - | LCP1 | 13 | - |
| intron-exon | AL121901.1 | 20 | - | BPIFA4P | 20 | - |
| exon-exon | NSUN6 | 10 | + | ARL5B | 10 | + |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| intron-exon | FRG1HP | 9 | - | LOC440896 | 9 | - |
| exon-exon | CCDC113 | 16 | + | EQTN | 9 | - |
| intron-exon | ZNF621 | 3 | - | ZNF620 | 3 | - |
| exon-exon | LOC107984578 | 13 | - | LCP1 | 13 | - |
| exon-exon | UVRAG | 11 | - | UVRAG-DT | 11 | - |
| exon-exon | NPEPPS | 17 | + | NPEPPS | 17 | - |
| exon-intron | MORC2-AS1 | 22 | + | MORC2 | 22 | + |
| exon-exon | VENTXP3 | 12 | - | USP32P1 | 17 | + |
| exon-intron | LOC105374629 | 5 | + | AC026415.1 | 5 | + |
| intron-exon | OR2H1 | 6 | - | LOC105375005 | 6 | - |
| exon-exon | FCSK | 16 | + | DNMT3B | 20 | + |
| exon-intron | LOC105374318 | 2 | + | AC011752.1 | 2 | + |
| exon-intron | LOC105371986 | 18 | - | AP005209.1 | 18 | - |
| exon-intron | ZNF536 | 19 | + | AC064865.1 | 2 | - |
| intron-exon | ENO1-AS1 | 1 | - | ENO1 | 1 | - |
| intron-exon | LOC112577525 | 1 | + | RER1 | 1 | + |
| intron-exon | STT3A-AS1 | 11 | - | FEZ1 | 11 | - |
| intron-exon | LOC112997596 | 5 | + | GPBP1 | 5 | + |
| exon-exon | LOC105375291 | 7 | - | LOC346296 | 7 | - |
| exon-exon | LOC648987 | 5 | + | LOC105374748 | 5 | + |
| exon-exon | LINC01692 | 21 | + | RBM44 | 2 | + |
| intron-exon | BTF3 | 5 | + | GGA1 | 22 | + |
| intron-exon | CDIPTOSP | 16 | - | CDIPT | 16 | - |
| exon-exon | PROSER1 | 13 | + | NHLRC3 | 13 | + |
| exon-exon | LOC105369907 | 12 | + | LOC105369908 | 12 | + |
| exon-intron | TNPO1 | 5 | - | CTD-2631K10.1 | 5 | - |
| exon-exon | FAM238B | 10 | + | MYO6 | 6 | + |
| intron-exon | LINC01248 | 2 | - | LOC107985843 | 2 | - |
| exon-intron | LOC100419257 | 1 | + | AK2 | 1 | + |
| intron-exon | PPP2R3C | 14 | + | PRORP | 14 | + |
| exon-exon | SLC44A5 | 1 | - | PLEKHA7 | 11 | - |
| intron-exon | NFIL3 | 9 | + | LOC105376146 | 9 | + |
| intron-exon | AC005392.1 | 19 | + | LOC107985349 | 19 | + |
| exon-intron | EXO1 | 1 | - | WDR64 | 1 | - |
| intron-exon | LOC101927020 | 6 | - | CRISP2 | 6 | - |
| exon-exon | OPA3 | 19 | - | CCDC61 | 19 | + |
| exon-exon | SHCBP1L | 1 | + | LOC100271717 | 1 | + |
| exon-intron | PES1P1 | 4 | - | AC015631.1 | 4 | - |
| intron-exon | AL135936.1 | 20 | - | LOC107985442 | 20 | - |
| intron-exon | PURPL | 5 | - | LOC105374695 | 5 | - |
| intron-exon | GJA9-MYCBP | 1 | - | RRAGC | 1 | - |
| intron-exon | FRS3 | 6 | + | PRICKLE4 | 6 | + |
| exon-intron | ZCCHC14 | 16 | + | LOC101928737 | 16 | + |
| exon-exon | LYPLA1 | 8 | - | PFKP | 10 | - |
| exon-exon | LOC112267868 | 14 | - | LRBA | 4 | - |
| exon-intron | ZNRF2P2 | 7 | + | DPY19L1P1 | 7 | - |
| exon-intron | LOC100419257 | 1 | + | AK2 | 1 | + |
| exon-intron | LOC107984505 | 12 | + | FAM186A | 12 | + |
| exon-exon | LOC107986262 | 4 | + | TBCEL | 11 | + |
| intron-exon | AL023574.1 | X | + | SRP9P1 | 10 | - |
| exon-exon | RRAGA | 9 | - | SAXO1 | 9 | - |
| exon-exon | CLDND1 | 3 | + | RPL38P4 | 3 | + |
| exon-intron | MIR202HG | 10 | - | LOC105377567 | 4 | + |
| intron-exon | NSUN4 | 1 | - | LRRC41 | 1 | - |
| exon-intron | TRBV7-1 | 7 | + | TRB | 7 | + |
| exon-intron | LOC107986140 | 3 | + | AC093001.1 | 3 | + |
| exon-exon | LOC107984578 | 13 | - | LCP1 | 13 | - |
| exon-exon | CA9 | 9 | - | ARHGEF39 | 9 | - |
| exon-intron | LINC01551 | 14 | + | LINC02281 | 14 | + |
| exon-exon | LOC102725227 | 18 | + | AQP4-AS1 | 18 | + |
| intron-exon | RNR2 | MT | + | RAB2A | 8 | + |
| exon-exon | NAP1L3 | X | + | FAM133A | X | + |
| intron-exon | AC026341.1 | 3 | + | GAP43 | 3 | + |
| intron-exon | AC010931.3 | 15 | + | ISLR | 15 | + |
| exon-intron | LOC107984036 | 4 | - | NAA15 | 4 | - |
| intron-exon | SHC4 | 15 | + | EID1 | 15 | + |
| intron-exon | LAMP5-AS1 | 20 | + | LAMP5 | 20 | + |
| intron-exon | MTPN | 7 | - | LUZP6 | 7 | - |
| exon-exon | CAB39L | 13 | + | SETDB2-PHF11 | 13 | + |
| intron-exon | C16orf96 | 16 | - | CDIP1 | 16 | - |
| exon-exon | TRAF2 | 9 | + | PPP2R2D | 10 | + |
| exon-exon | SORT1 | 1 | - | FAF1 | 1 | - |
| exon-intron | ZIM2-AS1 | 19 | + | OR5AH1P | 19 | + |
| exon-exon | ZNF691 | 1 | + | GNS | 12 | - |
| exon-exon | LOC101927300 | 10 | - | GOT1 | 10 | - |
| intron-exon | LOC101929243 | 6 | - | ILRUN | 6 | - |
| exon-exon | TPBGL | 11 | - | LOC105369388 | 11 | - |
| intron-exon | LOC101928438 | 9 | - | LOC107987011 | 9 | - |
| exon-exon | FHIT | 3 | - | PEG10 | 7 | + |
| exon-exon | NRCAM | 7 | - | PNPLA8 | 7 | - |
| exon-exon | U2AF2 | 19 | + | KCNK1 | 1 | + |
| intron-exon | CCNY | 10 | + | CUL2 | 10 | - |
| exon-exon | PAM | 5 | + | ABCF2-H2BE1 | 7 | - |
| exon-exon | RNU6-9 | 19 | + | CYP27A1 | 2 | + |
| intron-exon | MIR31HG | 9 | - | IFNWP2 | 9 | - |
| intron-exon | ZNF69 | 19 | + | PJA2 | 5 | - |
| exon-exon | LINC01250 | 2 | - | ADGRL3 | 4 | + |
| exon-exon | COL19A1 | 6 | - | LMBRD1 | 6 | - |
| exon-intron | S100A16 | 1 | - | BX470102.2 | 1 | - |
| exon-exon | TLR4 | 9 | + | LOC105376244 | 9 | + |
| exon-exon | LHX6 | 9 | - | NDUFA8 | 9 | - |
| exon-exon | RNA45SN1 | 21 | + | ZFP36L1 | 14 | - |
| intron-exon | BAALC-AS2 | 8 | + | BAALC | 8 | + |
| exon-exon | USP44 | 12 | - | P3H1 | 1 | - |
| exon-exon | LOC105377413 | 4 | - | LOC105377412 | 4 | - |
| exon-exon | LOC101927300 | 10 | - | GOT1 | 10 | - |
| intron-exon | AC007318.2 | 2 | - | RAB1A | 2 | - |
| exon-intron | LOC101929007 | 19 | - | ZNF429 | 19 | - |
| intron-exon | STYXL1 | 7 | + | MDH2 | 7 | + |
| exon-exon | PIR | X | - | PIR-FIGF | X | - |
| exon-intron | SDHAF2 | 11 | + | AP003108.2 | 11 | + |
| exon-intron | KIAA1191 | 5 | - | SIMC1 | 5 | - |
| intron-exon | PURA | 5 | - | MALINC1 | 5 | - |
| exon-exon | ZNF786 | 7 | - | PRKAG2 | 7 | - |
| exon-intron | MAGOH | 1 | - | CZIB | 1 | - |
| intron-exon | GATD3B | 21 | + | LOC101928576 | 21 | + |
| intron-exon | NDOR1 | 9 | + | FTH1 | 11 | - |
| intron-exon | GPR75-ASB3 | 2 | - | ASB3 | 2 | - |
| exon-exon | LOC101929937 | 20 | - | NRSN2-AS1 | 20 | - |
| exon-exon | TMEM42 | 3 | + | PPIAP18 | 3 | + |
| exon-exon | LOC729867 | 1 | + | PEA15 | 1 | + |
| exon-exon | SRP9 | 1 | + | FGF12 | 3 | - |
| exon-exon | PRH1 | 12 | - | PRR4 | 12 | - |
| exon-exon | RNA45SN1 | 21 | + | NELL2 | 12 | - |
| exon-intron | OLIG1 | 21 | - | LOC105377136 | 21 | - |
| exon-intron | PALM2AKAP2 | 9 | + | GNAQ | 9 | - |
| exon-exon | MAPT | 17 | + | AGAP3 | 7 | + |
| exon-exon | PLPBP | 8 | + | OSTM1 | 6 | - |
| exon-exon | ST20 | 15 | - | ST20-MTHFS | 15 | - |
| exon-exon | FZD3 | 8 | + | CTBP1 | 4 | - |
| exon-intron | LOC102724397 | 18 | - | AP001033.1 | 18 | - |
| exon-exon | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | SLC25A51 | 9 | - | RP11-613M10.9 | 9 | - |
| exon-exon | DHCR24 | 1 | + | TMEM61 | 1 | + |
| exon-exon | DLEU7 | 13 | - | LOC107984568 | 13 | - |
| exon-exon | LUC7L3 | 17 | + | RAB4B-EGLN2 | 19 | + |
| exon-intron | GCFC2 | 2 | + | WDR59 | 16 | + |
| exon-exon | LINC00674 | 17 | + | AMZ2 | 17 | + |
| exon-exon | HSP90AB1 | 6 | + | RTN3 | 11 | + |
| exon-exon | ACSS1 | 20 | - | APMAP | 20 | - |
| intron-exon | RPL4 | 15 | - | RPARP-AS1 | 10 | + |
| exon-intron | CCN2 | 6 | + | AL133346.1 | 6 | + |
| exon-exon | GPALPP1 | 13 | + | PRKCQ | 10 | - |
| exon-intron | LOC105374310 | 3 | - | LRCH3 | 3 | - |
| intron-exon | LOC107984609 | 13 | - | LOC105370343 | 13 | - |
| exon-intron | CCDC163 | 1 | - | POM121L7P | 22 | - |
| exon-intron | STAT1 | 2 | - | GLS | 2 | - |
| exon-intron | RNF168 | 3 | - | UBXN7 | 3 | - |
| exon-intron | SRP9P1 | 10 | - | TNKS2 | 10 | - |
| exon-intron | LCA5L | 21 | - | GET1-SH3BGR | 21 | - |
| exon-exon | ELK2BP | 14 | + | LOC105370698 | 14 | + |
| exon-exon | ZMYM6 | 1 | - | TMEM35B | 1 | - |
| exon-intron | PGAP2 | 11 | + | RHOG | 11 | + |
| exon-intron | RAD9B | 12 | + | PPTC7 | 12 | + |
| exon-exon | TARDBP | 1 | + | MASP2 | 1 | + |
| intron-exon | KLHL30-AS1 | 2 | - | KLHL30 | 2 | - |
| intron-exon | AL157955.1 | 14 | - | GPR65 | 14 | - |
| exon-intron | DSG2-AS1 | 18 | - | DSG2 | 18 | - |
| exon-intron | CTR9 | 11 | + | EIF4G2 | 11 | + |
| exon-exon | SRSF9 | 12 | - | GATC | 12 | - |
| exon-exon | FDFT1 | 8 | + | CTSB | 8 | + |
| exon-intron | LOC101929485 | 3 | - | AC079382.2 | 3 | - |
| exon-intron | PLAC8L1 | 5 | + | LARS1 | 5 | + |
| intron-exon | HDAC4 | 2 | + | HDAC4-AS1 | 2 | + |
| exon-intron | LOC389765 | 9 | + | AL353743.1 | 9 | + |
| exon-exon | CUBN | 10 | - | LOC102723955 | 1 | - |
| exon-exon | PDXDC1 | 16 | + | LOC112268172 | 16 | + |
| exon-exon | PHTF1 | 1 | - | MAGI3 | 1 | - |
| exon-intron | ZSCAN12 | 6 | - | ZKSCAN3 | 6 | - |
| exon-exon | YY1AP1 | 1 | - | MRPL51 | 12 | - |
| exon-intron | AADACL2-AS1 | 3 | - | IGSF10 | 3 | - |
| exon-exon | LOC105369519 | 11 | + | DDX6 | 11 | + |
| exon-exon | LOC339260 | 17 | + | USP22 | 17 | + |
| exon-intron | LINC01755 | 1 | + | LINC01753 | 1 | + |
| exon-intron | LRCH3 | 3 | + | IQCG | 3 | + |
| exon-intron | TMEM200C | 18 | + | AP001021.3 | 18 | + |
| exon-exon | LOC91450 | 15 | + | TBC1D2B | 15 | + |
| intron-exon | TPCN2 | 11 | + | LOC105373035 | 22 | - |
| exon-exon | TTLL5 | 14 | + | CXADR | 21 | + |
| exon-exon | GLG1 | 16 | - | LOC105371716 | 17 | + |
| exon-exon | KRBOX1-AS1 | 3 | + | KRBOX1 | 3 | + |
| intron-exon | ETV7-AS1 | 6 | + | PXT1 | 6 | + |
| exon-intron | GABPAP | 7 | - | RP11-340I6.7 | 7 | - |
| exon-exon | HHLA2 | 3 | + | MYH15 | 3 | + |
| exon-intron | ARHGAP44 | 17 | + | ELAC2 | 17 | + |
| exon-intron | SLC9B1 | 4 | - | CISD2 | 4 | - |
| exon-intron | MIR1302-10 | | - | AC140725.1 | | - |
| exon-intron | MARCHF8 | 10 | - | LOC102724323 | | - |
| exon-exon | SHISA4 | 1 | + | LMOD1 | 1 | + |
| exon-intron | NMT2 | 10 | - | RPP38 | 10 | - |
| exon-exon | RIMBP2 | 12 | - | PWWP2B | 10 | + |
| exon-exon | MYL5 | 4 | - | ATP5ME | 4 | - |
| exon-intron | NQO1 | 16 | - | PGK1 | X | + |
| intron-exon | AC023141.4 | 7 | + | NCDN | 1 | + |
| intron-exon | AL022328.4 | 22 | - | TRABD | 22 | - |
| exon-intron | SLCO1A2 | 12 | - | SLCO1B1 | 12 | - |
| exon-intron | ERCC2 | 19 | - | KLC3 | 19 | - |
| exon-exon | SH3GLB2 | 9 | - | NUP188 | 9 | - |
| exon-exon | UBN2 | 7 | - | RPL37AP5 | 7 | - |
| exon-exon | GPM6B | X | - | ACTG1 | 17 | - |
| exon-exon | DNAJA1 | 9 | + | RPS29 | 14 | - |
| exon-exon | MAPK1 | 22 | - | ERI1 | 8 | + |
| exon-exon | LOC107987007 | 9 | + | LOC101930026 | 9 | + |
| intron-exon | A2ML1 | 12 | - | RIMKLB | 12 | - |
| exon-exon | TUBA4A | 2 | - | STK16 | 2 | - |
| intron-exon | AL137247.2 | 13 | + | N4BP2L2 | 13 | + |
| exon-exon | LOC101928323 | 3 | - | SEC22C | 3 | - |
| exon-intron | PLD3 | 19 | + | HIPK4 | 19 | + |
| exon-exon | SLC4A8 | 12 | + | LMBRD1 | 6 | - |
| exon-exon | SPARCL1 | 4 | - | SGSM1 | 22 | + |
| intron-exon | AL359764.2 | 1 | + | LOC105373230 | 1 | + |
| exon-exon | PRR14 | 16 | + | RPL23 | 17 | - |
| exon-exon | MAP4K3-DT | 2 | + | TMEM178A | 2 | + |
| exon-intron | RPE | 2 | + | ADAMTS6 | 5 | - |
| exon-intron | RNU6-2 | 19 | + | MRTFB | 16 | + |
| intron-exon | RBPJL | 20 | - | MATN4 | 20 | - |
| exon-exon | GPR156 | 3 | - | GSK3B | 3 | - |
| exon-exon | REV3L | 6 | - | PPA2 | 4 | - |
| intron-exon | RNR1 | MT | + | TM9SF3 | 10 | - |
| intron-exon | GAS5 | 1 | - | APLP2 | 11 | + |
| exon-intron | PCOLCE-AS1 | 7 | - | FBXO24 | 7 | - |
| intron-exon | RNA5-8SP10 | 21 | + | SLC2A5 | 1 | - |
| exon-exon | RNA45SN3 | 21 | + | UIMC1 | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-intron | RNA45SN2 | 21 | + | PSAT1 | 9 | + |
| intron-exon | GRM5 | 11 | - | IFNGR1 | 6 | - |
| intron-exon | TEKT4P2 | 21 | - | RBPJ | 4 | + |
| exon-exon | ELK1 | X | - | B4GALT3 | 1 | - |
| exon-exon | RNA45SN3 | 21 | + | ZP2 | 16 | - |
| intron-exon | CD160 | 1 | - | PDZK1 | 1 | - |
| intron-exon | RNR2 | MT | + | ALDOC | 17 | - |
| exon-exon | LOC101929767 | 17 | - | BRCA1 | 17 | - |
| exon-exon | POLR2J3 | 7 | - | RASA4B | 7 | - |
| exon-exon | RNA45SN1 | 21 | + | NRIP2 | 12 | - |
| intron-exon | CCDC102B | 18 | + | PAK1 | 11 | - |
| intron-exon | LOC105373583 | 2 | + | RALB | 2 | + |
| intron-exon | AC009899.1 | 18 | - | CELF4 | 18 | - |
| exon-exon | LOC105375690 | 8 | - | SLC25A32 | 8 | - |
| exon-intron | RNA45SN2 | 21 | + | MBP | 18 | - |
| exon-exon | LINC02857 | 6 | + | MRAP2 | 6 | + |
| intron-exon | SNHG6 | 8 | - | CPE | 4 | + |
| exon-exon | IFT20 | 17 | - | GLS | 2 | + |
| intron-exon | RNA5-8SP10 | 21 | + | MBP | 18 | - |
| exon-intron | RNA45SN1 | 21 | + | KIF22 | 16 | + |
| exon-exon | LOC100506851 | 6 | + | SH3BGRL2 | 6 | + |
| intron-exon | SRF | 6 | - | PRKAR1B | 7 | - |
| exon-exon | LOC101928397 | 7 | + | ZYX | 7 | + |
| exon-exon | RNA45SN3 | 21 | + | ABI2 | 2 | + |
| exon-exon | WARS2-AS1 | 1 | + | RYR2 | 1 | + |
| exon-exon | NUDT5 | 10 | - | ZMYND11 | 10 | + |
| exon-intron | APOD | 3 | - | TCFL5 | 20 | - |
| exon-exon | LOC105379016 | 5 | - | GUSBP9 | 5 | - |
| intron-exon | AC073548.2 | 19 | - | SLC8A2 | 19 | - |
| exon-exon | RNA45SN3 | 21 | + | MPP2 | 17 | - |
| exon-exon | RNU1-2 | 1 | + | PAQR6 | 1 | - |
| intron-exon | AC009899.1 | 18 | - | CELF4 | 18 | - |
| exon-exon | GPR75-ASB3 | 2 | - | ASB3 | 2 | - |
| intron-exon | SEC22B4P | 1 | + | ALDOC | 17 | - |
| exon-exon | LOC105375434 | 7 | + | PMPCB | 7 | + |
| intron-exon | CCDC144A | 17 | + | USP32P1 | 17 | + |
| exon-exon | WDR74 | 11 | - | TANGO2 | 22 | + |
| intron-exon | LOC105370449 | 14 | - | ADHFE1 | 8 | + |
| exon-exon | MALAT1 | 11 | + | PLEKHB1 | 11 | + |
| intron-exon | LOC107985736 | 1 | - | MYADM | 19 | + |
| intron-exon | LOC105377986 | 6 | + | HEY2 | | + |
| exon-exon | SIRT4 | 12 | - | SLC3A2 | 11 | + |
| intron-exon | LOC105370449 | 14 | - | MBP | 18 | - |
| intron-exon | AC009899.1 | 18 | - | CELF4 | 18 | - |
| intron-exon | LOC105376297 | 9 | - | FIBCD1 | 9 | - |
| exon-intron | PAX8-AS1 | 2 | + | LOC105375943 | 9 | - |
| exon-exon | RNA45SN2 | 21 | + | SLC2A1 | 1 | - |
| exon-exon | ZNF736 | 7 | + | LOC105375321 | 7 | + |
| exon-exon | ZER1 | 9 | + | TBC1D13 | 9 | + |
| intron-exon | RIC3-DT | 11 | - | RIC3 | 11 | - |
| exon-exon | LOC101927967 | 2 | - | DCTN1 | 2 | - |
| exon-exon | LOC100506851 | 6 | + | SH3BGRL2 | 6 | + |
| intron-exon | CRYBG1 | 6 | + | CPLX2 | 5 | + |
| exon-exon | ZNF765-ZNF761 | 19 | + | VN1R103P | 19 | + |
| exon-exon | LOC112267857 | 6 | + | SH3BGRL2 | 6 | + |
| exon-exon | RNA45SN2 | 21 | + | PDK2 | 17 | + |
| exon-exon | WDR74 | 11 | - | CSRP1 | 1 | - |
| exon-exon | DOCK10 | 2 | - | SERPINE2 | 2 | - |
| exon-exon | WDR74 | 11 | - | PAQR6 | 1 | - |
| exon-exon | ND1 | MT | + | MBP | 18 | - |
| intron-exon | RGP1 | 9 | - | GBA2 | 9 | - |
| intron-exon | PLS3-AS1 | X | + | PLS3 | X | + |
| exon-exon | APLP2 | 11 | + | EIF4G2 | 11 | - |
| exon-exon | RNA45SN2 | 21 | + | PAQR6 | 1 | - |
| exon-exon | SIRT4 | 12 | - | NTM | 11 | + |
| exon-exon | LOC105379016 | 5 | - | GTF2H2 | 5 | - |
| intron-exon | SNHG1 | 11 | - | SNX2 | 5 | + |
| intron-exon | SPRYD4 | 12 | - | MIP | 12 | - |
| exon-exon | BAG1 | 9 | + | CHMP5 | 9 | + |
| intron-exon | LOC105372272 | 19 | + | ICAM1 | 19 | + |
| exon-exon | WAC | 10 | + | HNRNPC | 14 | - |
| exon-exon | TMEM107 | 17 | - | PGK1 | X | + |
| intron-exon | UQCRH | 1 | - | LRRC41 | 1 | - |
| exon-exon | RNU1-1 | 1 | - | ARL6IP1 | 16 | - |
| exon-exon | RNU5B-1 | 15 | + | HNRNPK | 9 | - |
| intron-exon | JAZF1 | 7 | - | SPARCL1 | 4 | - |
| exon-exon | SIRT4 | 12 | - | HSPA1A | 6 | + |
| intron-exon | IGF1R | 15 | + | HS6ST2 | X | - |
| intron-exon | RNA5-8SP10 | 21 | + | DNM1L | 12 | + |
| exon-intron | SIRT4 | 12 | - | MED29 | 19 | + |
| intron-exon | CD55 | 1 | - | LOC107985251 | 1 | - |
| exon-intron | RNA45SN3 | 21 | + | GPD2 | 2 | + |
| intron-exon | LRFN5 | 14 | + | COPB2 | 3 | - |
| exon-intron | SIRT4 | 12 | - | APPL2 | 12 | - |
| intron-exon | RP11-298J20.4 | 10 | + | ZRANB1 | 10 | + |
| exon-exon | RNU5A-1 | 15 | + | ICOSLG | 21 | - |
| exon-exon | PPM1K-DT | 4 | + | HERC6 | 4 | + |
| exon-exon | RNA45SN2 | 21 | + | GRN | 17 | + |
| intron-exon | RPL23 | 17 | - | UBTF | 17 | - |
| exon-exon | RN7SK | 6 | + | KRT6A | 12 | - |
| exon-intron | ZSCAN16-AS1 | 6 | - | ZNF165 | 6 | - |
| intron-exon | LINC02006 | 3 | + | TRIM16L | 17 | + |
| intron-exon | LOC100130691 | 2 | - | NFE2L2 | 2 | - |
| exon-exon | HSPE1 | 2 | + | MOB4 | 2 | + |
| exon-exon | RN7SK | 6 | + | SLC2A1 | 1 | - |
| exon-exon | RN7SK | 6 | + | ACTN1 | 14 | - |
| exon-intron | FTH1 | 11 | - | CPSF7 | 11 | - |
| exon-exon | KRT6A | 12 | - | AP2B1 | 17 | + |
| intron-exon | PAK2 | 3 | - | ZNF512 | 2 | + |
| exon-intron | ZNF229 | 19 | - | ZNF285 | 19 | - |
| exon-exon | CCDC3 | 10 | + | OPTN | 10 | + |
| intron-exon | AC020910.6 | | - | SCGB1B2P | 19 | - |
| exon-exon | STARD3 | 17 | + | TCAP | 17 | + |
| intron-exon | PTGR2 | 14 | + | ZNF410 | 14 | + |
| exon-exon | RPL15P3 | 6 | + | RPL15 | 3 | + |
| intron-exon | NUFIP2 | 17 | - | RBMX | X | - |
| intron-exon | AC009899.1 | 18 | - | CELF4 | 18 | - |
| intron-exon | RNR2 | MT | + | RPL3 | 22 | - |
| intron-exon | NUDT15 | 13 | - | SUCLA2 | 13 | - |
| exon-exon | RNA45SN2 | 21 | + | CSNK1A1 | 5 | - |
| exon-exon | ZFP90 | 16 | + | CDH3 | 16 | + |
| exon-intron | GBA | 1 | - | MTX1P1 | 1 | - |
| intron-exon | AL136295.1 | 14 | - | TM9SF1 | 14 | - |
| exon-exon | PCOLCE-AS1 | 7 | + | PCOLCE | 7 | + |
| exon-exon | CEP170 | 1 | - | SDCCAG8 | 1 | + |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| intron-exon | RNU1-27P | 14 | + | SERPINE2 | 2 | - |
| exon-intron | RNA45SN1 | 21 | + | LMOD2 | 7 | + |
| intron-exon | RNR2 | MT | + | PDHB | 3 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| exon-exon | RNA45SN3 | 21 | + | BECN1 | 17 | - |
| exon-exon | RNU1-2 | 1 | + | CKMT1A | 15 | + |
| intron-exon | LOC107986560 | 6 | + | STMN2 | 8 | + |
| intron-exon | RP11-418J17.3 | 1 | - | WARS2-AS1 | 1 | - |
| intron-exon | LOC116286206 | 20 | - | ZMYND8 | 20 | - |
| exon-exon | RNU6-3P | X | - | ALDH18A1 | 10 | - |
| exon-exon | LOC112268225 | 1 | - | ELOVL1 | 1 | - |
| intron-exon | NUDT15 | 13 | - | SUCLA2 | 13 | - |
| exon-exon | GALNT11 | 7 | + | TRABD2A | 2 | - |
| exon-exon | RNU1-1 | 1 | - | EIF4B | 12 | + |
| exon-exon | SLC2A1-AS1 | 1 | - | SLC2A1 | 1 | - |
| exon-exon | PPP6R3 | 11 | + | DPP3 | 11 | + |
| exon-exon | RNA45SN2 | 21 | + | UBAP2L | 1 | + |
| intron-exon | AC084876.2 | 12 | - | GIT2 | 12 | - |
| exon-intron | RNU1-89P | 4 | - | POT1 | 7 | - |
| exon-exon | RAPGEF6 | 5 | - | USP33 | 1 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| intron-exon | HLA-DMA | 6 | - | HLA-DMB | 6 | - |
| intron-exon | ARMCX5-GPRASP2 | X | + | LOC392232 | 8 | - |
| intron-exon | SEC22B4P | 1 | + | MORF4L2 | X | - |
| intron-exon | STIMATE-MUSTN1 | 3 | - | ITIH4 | 3 | - |
| exon-exon | RN7SK | 6 | + | FHL1 | X | + |
| intron-exon | TRA | 14 | + | TRDC | 14 | + |
| exon-exon | OBSL1 | 2 | - | CHPF | 2 | - |
| intron-exon | C1orf194 | 1 | + | ELAPOR1 | 1 | + |
| intron-exon | GAS5 | 1 | - | HNRNPUL1 | 19 | + |
| exon-exon | LOC101929160 | 1 | + | CDC73 | 1 | + |
| exon-intron | TBR1 | 2 | + | SLC4A10 | 2 | + |
| exon-exon | SIRT4 | 12 | - | SRSF3 | 6 | + |
| exon-exon | LOC112268052 | 9 | + | RAD23B | 9 | + |
| exon-exon | CCDC3 | 10 | + | OPTN | 10 | + |
| exon-exon | LOC101929160 | 1 | + | CDC73 | 1 | + |
| exon-exon | ZFP90 | 16 | + | CDH3 | 16 | + |
| intron-exon | NUDT15 | 13 | - | SUCLA2 | 13 | - |
| exon-exon | USPL1 | 13 | - | HMGB1 | 13 | - |
| exon-exon | PPDPF | 20 | + | CHD3 | 17 | + |
| intron-exon | ZFAS1 | 20 | + | SAFB | 19 | + |
| exon-exon | LOC107984945 | 1 | + | SMAP2 | 1 | + |
| intron-exon | RP11-298J20.4 | 10 | + | ZRANB1 | 10 | + |
| exon-exon | MZT2B | 2 | - | SMPD4 | 2 | - |
| exon-exon | MZT2B | 2 | - | SMPD4 | 2 | - |
| exon-exon | RNA45SN3 | 21 | + | SLC3A2 | 11 | + |
| intron-exon | TAF1D | 11 | - | COASY | 17 | + |
| intron-exon | LOC107985892 | 2 | - | PPP3R1 | 2 | - |
| exon-intron | NBR1 | 17 | - | LOC101929767 | 17 | - |
| exon-exon | MATR3 | 5 | + | HSPA4 | 5 | + |
| intron-exon | LOC105379574 | 1 | - | FDFT1 | 8 | + |
| exon-intron | RNVU1-18 | 1 | - | AHSA1 | 14 | + |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| exon-exon | RNA45SN3 | 21 | + | TUBB | 6 | + |
| intron-exon | SNAP23 | 15 | + | NPIPB5 | 16 | + |
| intron-exon | CENPC | 4 | - | PAICS | 4 | + |
| exon-exon | ZNF655 | 7 | + | PAXIP1 | 7 | - |
| exon-intron | DHPS | 19 | - | WDR83 | 19 | - |
| exon-exon | RNA45SN2 | 21 | + | PGK1 | X | + |
| exon-exon | RNA45SN1 | 21 | + | PGA5 | 11 | + |
| exon-intron | RNA45SN1 | 21 | + | LIPF | 10 | + |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| exon-exon | RNU1-2 | 1 | + | WIF1 | 12 | - |
| exon-exon | TSTD1 | 1 | - | F11R | 1 | - |
| exon-exon | RNA5S11 | 1 | - | DUOXA2 | 15 | + |
| exon-exon | RNU1-1 | 1 | - | PGK1 | X | + |
| intron-exon | SEC22B4P | 1 | + | ALDOC | 17 | - |
| exon-exon | C12orf57 | 12 | + | HBP1 | 7 | + |
| exon-exon | LOC101928076 | 6 | + | DSP | 6 | + |
| intron-exon | CCDC200 | 17 | - | KRT17 | 17 | - |
| intron-exon | CSPP1 | 8 | - | COPS5 | 8 | - |
| intron-exon | NEK11 | 3 | - | ASTE1 | 3 | - |
| exon-intron | RNA45SN3 | 21 | + | KPNA2 | 17 | + |
| exon-exon | BROX | 1 | - | AIDA | 1 | - |
| intron-exon | PLAGL2 | 20 | + | POFUT1 | 20 | + |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| intron-exon | C1S | 12 | - | LPCAT3 | 12 | - |
| intron-exon | RMI1 | 9 | - | HNRNPK | 9 | - |
| intron-exon | RP11-298J20.4 | 10 | + | ZRANB1 | 10 | + |
| exon-exon | SWT1 | 1 | - | TRMT1L | 1 | - |
| exon-exon | MDC1 | 6 | + | TUBB | 6 | + |
| exon-exon | RNA45SN2 | 21 | + | CNTD1 | 17 | + |
| exon-exon | LOC105378235 | 5 | + | G3BP1 | 5 | + |
| exon-exon | KCNMA1 | 10 | - | CCNYL4 | 10 | + |
| intron-exon | RASA4DP | 7 | - | RASA4 | 7 | - |
| intron-exon | DENND4A | 15 | + | RGPD2 | 2 | - |
| intron-exon | AL356580.1 | 13 | + | IPO5 | 13 | + |
| exon-intron | MAZ | 16 | + | PRRT2 | 16 | + |
| intron-exon | LOC112695092 | 22 | - | PLA2G6 | 22 | - |
| exon-exon | KCNIP2 | 10 | - | OGA | 10 | - |
| intron-exon | KCNIP2-AS1 | 10 | - | OGA | 10 | - |
| intron-exon | ESRP2 | 16 | + | PLA2G15 | 16 | + |
| exon-exon | LOC112268184 | 17 | + | KPNB1 | 17 | + |
| exon-exon | SEC23A-AS1 | 14 | - | SEC23A | 14 | - |
| intron-exon | LOC105371499 | 17 | - | ALOX15 | 17 | - |
| exon-exon | RNVU1-18 | 1 | - | MCTP1 | 5 | - |
| exon-intron | NBR1 | 17 | - | LOC101929767 | 17 | - |
| intron-exon | LOC105371499 | 17 | - | ALOX15 | 17 | - |
| exon-exon | GUSBP14 | 5 | - | GUSBP16 | 5 | + |
| exon-intron | THAP4 | 2 | + | ATG4B | 2 | + |
| intron-exon | LINC01934 | 2 | + | ITGA4 | 2 | + |
| exon-exon | PBX2 | 6 | - | AGER | 6 | - |
| exon-exon | TRA2B | 3 | - | ASF1B | 19 | - |
| exon-exon | GPC2 | 7 | - | GAL3ST4 | 7 | - |
| intron-exon | NCL | 2 | - | QARS1 | 3 | - |
| intron-exon | ARHGAP29-AS1 | 1 | + | ABCD3 | 1 | + |
| exon-intron | SMG1P1 | 16 | + | NPIPB5 | 16 | + |
| exon-exon | RNA45SN1 | 21 | + | SH2D3C | 9 | - |
| exon-exon | PNPO | 17 | + | CDK5RAP3 | 17 | + |
| exon-exon | SIRT4 | 12 | - | RAF1 | 3 | - |
| intron-exon | MALRD1 | 10 | + | ATP5F1A | 18 | - |
| intron-exon | LOC107985736 | 1 | - | PGK1 | X | + |
| exon-exon | P4HB | 17 | - | PLEKHB2 | 2 | + |
| exon-intron | RNA45SN2 | 21 | + | APLP2 | 11 | + |
| intron-exon | LTBR | 12 | - | SCNN1A | 12 | - |
| intron-exon | BAZ2B | 2 | + | MARCHF7 | 2 | + |
| exon-exon | CLCA2 | 1 | + | LYZ | 12 | - |
| exon-exon | ZER1 | 9 | + | TBC1D13 | 9 | + |
| exon-intron | APIP | 11 | - | LOC102723568 | 11 | - |
| exon-exon | RNA45SN2 | 21 | + | DDX3Y | Y | + |
| exon-intron | RNU1-2 | 1 | + | MVK | 12 | + |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| intron-exon | CCDC200 | 17 | - | LETMD1 | 12 | + |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-intron | EIF3I | 1 | + | NUP98 | 11 | - |
| exon-intron | SDC2 | 8 | + | BGN | X | + |
| exon-intron | INTS11 | 1 | - | SORBS1 | 10 | - |
| exon-exon | JAZF1 | 7 | - | CTNNA1 | 5 | + |
| exon-exon | NBPF9 | 1 | - | NBPF20 | 1 | - |
| exon-exon | EEF1A1P6 | 7 | - | EEF1A1 | 6 | - |
| exon-exon | LOC105377021 | 3 | + | TRIM71 | 3 | + |
| exon-exon | RIMKLB | 12 | + | ND4 | MT | + |
| intron-exon | AC139795.2 | 5 | + | LOC202181 | 5 | + |
| exon-exon | VARS2 | 6 | - | GTF2H4 | 6 | - |
| exon-exon | ACTA1 | 1 | + | FHL1 | X | - |
| exon-exon | ELAPOR2 | 7 | + | ZNF438 | 10 | + |
| intron-exon | AL021396.1 | 20 | - | LOC105372520 | 20 | - |
| exon-exon | RNU2-1 | 17 | - | PIAS3 | 1 | - |
| exon-exon | LOC101928143 | 14 | - | NUMB | 14 | - |
| intron-exon | TRIM2 | 4 | - | CSNK1D | 17 | - |
| exon-exon | RNA45SN1 | 21 | - | SLC6A7 | 5 | - |
| exon-intron | PML | 15 | + | PML | 15 | - |
| exon-exon | LBHD1 | 11 | - | INTS5 | 11 | - |
| intron-exon | FGG | 4 | - | NR3C1 | 5 | - |
| exon-exon | HNRNPUL2-BSCL2 | 11 | - | GAR1 | 4 | + |
| exon-exon | RNA45SN1 | 21 | - | VEGFA | 6 | - |
| intron-exon | SNX29 | 16 | + | MCM7 | 7 | - |
| intron-exon | RNF43 | 17 | + | STAG1 | 3 | - |
| exon-exon | DRAP1 | 11 | + | SNHG29 | 17 | + |
| exon-exon | NPM1 | 5 | + | ALK | 2 | - |
| exon-intron | ATP1B1 | 1 | + | NME7 | 1 | + |
| exon-exon | USP45 | 6 | - | TSTD3 | 6 | - |
| exon-exon | NAE1 | 16 | - | NAE1 | 16 | + |
| exon-intron | HDLBP | 2 | + | HDLBP | 2 | - |
| exon-exon | NINJ1 | 9 | + | TRMT61A | 14 | - |
| exon-exon | PSMD8 | 19 | - | SLC35B2 | 6 | + |
| exon-exon | SERINC2 | 1 | - | SERINC2 | 1 | + |
| exon-exon | FAM177A1 | 14 | + | FAM177A1 | 14 | - |
| exon-exon | CLCN3 | 4 | + | CLCN3 | 4 | - |
| exon-exon | LOC105372942 | 22 | + | LOC105377182 | 22 | + |
| exon-exon | MARF1 | 16 | - | MARF1 | 16 | + |
| exon-intron | LOC100129098 | 8 | - | ATF7IP2 | 16 | + |
| exon-exon | DIXDC1 | 11 | - | DIXDC1 | 11 | + |
| intron-exon | ANK2 | 4 | + | ANK2 | 4 | - |
| exon-intron | HSPA12A | 10 | - | LOC105378499 | 10 | + |
| exon-exon | CREBBP | 16 | - | CREBBP | 16 | + |
| exon-exon | URI1 | 19 | + | URI1 | 19 | - |
| exon-exon | SLC33A1 | 3 | - | SLC33A1 | 3 | + |
| exon-intron | MRC2 | 17 | - | SECISBP2 | 9 | - |
| exon-exon | LNPEP | 5 | + | LNPEP | 5 | - |
| exon-exon | RASSF8 | 12 | + | RASSF8 | 12 | - |
| exon-exon | PER3 | 1 | + | PER3 | 1 | - |
| exon-exon | DIAPH3 | 13 | - | DIAPH3 | 13 | + |
| exon-intron | HNRNPA3 | 2 | - | IL1RAPL2 | X | - |
| intron-exon | RB1 | 13 | + | TMEM65 | 8 | - |
| exon-exon | PRKAA2 | 1 | + | PRKAA2 | 1 | - |
| intron-exon | RP11-563D10.1 | 1 | - | SPON1 | 11 | + |
| exon-exon | CCNI | 4 | - | LOC105377291 | 4 | - |
| exon-exon | MAD2L1 | 4 | - | FAM168B | 2 | + |
| exon-intron | PSMB9 | 6 | + | FAM193A | 4 | - |
| exon-intron | EEF1AKMT2 | 10 | - | FAM53B | 10 | - |
| exon-exon | ZNF774 | 15 | + | IQGAP1 | 15 | + |
| exon-intron | HLA-G | 6 | + | HLA-T | 6 | + |
| exon-exon | AGPAT1 | 6 | - | PRRT1 | 6 | - |
| exon-intron | HLA-B | 6 | - | HLA-C | 6 | - |
| exon-intron | LOC107986091 | 3 | - | DNASE1L3 | 3 | - |
| intron-exon | OR13I1P | 9 | + | OR13D1 | 9 | + |
| exon-exon | NDUFAF3 | 3 | - | DALRD3 | 3 | - |
| exon-exon | FTH1P13 | 14 | - | NCOA4P1 | 14 | - |
| exon-exon | HLA-A | 6 | - | HCG4B | 6 | - |
| exon-exon | HLA-A | 6 | - | HCG4B | 6 | - |
| intron-exon | HLA-H | 6 | - | HCG4 | 6 | - |
| exon-exon | HLA-A | 6 | - | HCG4B | 6 | - |
| exon-exon | HLA-A | 6 | - | HCG4B | 6 | - |
| exon-exon | HLA-B | 6 | - | HLA-C | 6 | - |
| exon-exon | HLA-B | 6 | - | HLA-C | 6 | - |
| intron-exon | LOC113839528 | 9 | - | PTGES | 9 | - |
| exon-exon | GRINA | 8 | - | PARP10 | 8 | - |
| exon-exon | RNA45SN2 | 21 | - | RNA45SN1 | 21 | + |
| exon-exon | RPL4 | 15 | - | ACTN1 | 14 | - |
| intron-exon | AC064802.1 | | + | LOC105375710 | | + |
| exon-exon | PPP6R2 | 22 | + | UBE2B | 5 | + |
| exon-intron | LIN28A | | - | C11orf49 | 11 | - |
| exon-exon | UGT2B24P | | - | UGT2B25P | | - |
| intron-exon | SEPTIN7P4 | | - | PHKG1P1 | 7 | - |
| exon-intron | OR52N2 | 11 | - | TRIM5 | 11 | - |
| intron-exon | UBE2W | 8 | - | CCNI | 4 | - |
| exon-intron | CPSF3 | 2 | - | RALGAPA2 | 20 | + |
| exon-intron | CFAP36 | 2 | + | LOC101929762 | 4 | - |
| intron-exon | FAM20B | 1 | - | GAS2L3 | 12 | - |
| exon-exon | SNTB2 | 16 | + | RBM45 | 2 | + |
| exon-exon | BRWD1P2 | 12 | + | LOC105369890 | 12 | + |
| intron-exon | GNGT1 | 7 | - | RNA45SN1 | 21 | - |
| exon-exon | CALU | 7 | - | CALU | 7 | + |
| exon-exon | ERBB3 | 12 | - | TRIM37 | 17 | - |
| exon-exon | ADAMTS19 | 5 | + | SLC27A6 | 5 | + |
| exon-exon | TMSB15B | X | + | H2BW3P | X | - |
| exon-exon | GRHL2 | 8 | + | LOC107984005 | 8 | + |
| intron-exon | NBEAP5 | 14 | - | LINC01296 | 14 | - |
| exon-exon | TPM4 | 19 | + | GSE1 | 16 | + |
| exon-exon | NIPAL2 | 8 | - | PAX8-AS1 | 2 | + |
| intron-exon | LOC105378776 | 1 | + | MIER1 | 1 | + |
| intron-exon | NOCT | 4 | + | ELF2 | 4 | + |
| intron-exon | ANKRD62P1 | 22 | + | ANKRD62P1-PARP4P3 | 22 | + |
| exon-intron | ATP6 | MT | - | ND4 | MT | + |
| exon-exon | CXCL14 | 5 | + | CXCL14 | 5 | - |
| exon-intron | NPRL2 | 3 | + | NPRL2 | 3 | - |
| intron-exon | GABPB1-AS1 | 15 | + | PLCL1 | 2 | + |
| intron-exon | AC092614.1 | | - | STAT4 | 2 | - |
| exon-exon | ARMC2 | 6 | + | GPR173 | X | + |
| exon-intron | NDUFS5 | 1 | + | SERHL | 22 | - |
| intron-exon | SLC41A1 | 1 | + | LOC107985250 | | + |
| intron-exon | PPIP5K1P1 | 15 | - | CATSPER2 | 15 | - |
| intron-exon | LOC110121135 | | + | LINC01102 | | + |
| exon-intron | ARID1B | 6 | + | CCDC140 | | + |
| exon-exon | RNA45SN1 | 21 | + | TRIB1 | 8 | + |
| exon-exon | RNA45SN3 | 21 | + | SIDT1 | 3 | + |
| intron-exon | IGH | 14 | - | IGHG4 | 14 | - |
| exon-exon | ARHGAP42 | 11 | + | FOLH1B | 11 | + |
| intron-exon | LOC112268284 | 21 | - | TPT1 | 13 | - |
| exon-exon | CATSPERE | 1 | - | CATSPERE | 1 | + |
| intron-exon | CDK7 | 5 | - | TCEANC | | + |
| exon-intron | RNA45SN3 | 21 | + | ZNF251 | 8 | - |
| exon-exon | RNA45SN1 | 21 | + | LAT2 | 7 | + |
| exon-exon | GALNS | 16 | - | CCNG2 | 4 | + |
| exon-exon | ZSWIM6 | 5 | + | ERP29 | 12 | + |
| exon-exon | NUDT14 | | - | JAG2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG2 | 14 | - |
| exon-intron | ORAI2 | 7 | + | NSD2 | 4 | + |
| exon-exon | HOOK3 | 8 | + | RET | 10 | + |
| intron-exon | TXNL4B | 16 | - | ALB | 4 | + |
| exon-exon | LOC101926948 | 9 | - | CD72 | 9 | - |
| exon-exon | IGHV3-30 | 14 | - | IGHV3-21 | 14 | - |
| exon-exon | TMPRSS2 | 21 | - | ETV1 | 7 | - |
| exon-exon | TMPRSS2 | 21 | - | ERG | 21 | - |
| intron-exon | IGH | 14 | + | BCL2 | 18 | + |
| exon-exon | FRYL | 4 | - | KMT2A | 11 | + |
| exon-exon | KMT2A | 11 | + | FRYL | 4 | - |
| exon-exon | KMT2A | 11 | + | FRYL | 4 | - |
| exon-intron | IGKV1-39 | 2 | - | IGK | 2 | + |
| exon-exon | IGLV2-23 | 22 | + | IGLL5 | 22 | + |
| exon-intron | IGHV3-30 | 14 | - | IGH | 14 | - |
| exon-exon | IGLV2-8 | 22 | + | IGLL5 | 22 | + |
| exon-intron | IGLV2-8 | 22 | + | IGLL5 | 22 | + |
| exon-exon | IGLV3-21 | 22 | + | IGLL5 | 22 | + |
| exon-intron | CRX | 19 | + | TPRX2P | | + |
| exon-exon | CXCL12 | 10 | - | SRPK2P | 8 | - |
| exon-exon | KMT2A | 11 | + | AFDN | 6 | + |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| exon-exon | KMT2A | 11 | + | ELL | 19 | - |
| exon-exon | ELL | 19 | - | KMT2A | 11 | + |
| exon-exon | KMT2A | 11 | + | AFF1 | 4 | + |
| exon-intron | IGHV3-33 | 14 | - | IGH | 14 | - |
| exon-exon | IGHV4-59 | 14 | - | IGHV4-39 | 14 | - |
| exon-exon | CHCHD7 | 8 | + | PLAG1 | 8 | - |
| exon-exon | CHCHD7 | 8 | + | PLAG1 | 8 | - |
| exon-intron | IGLV1-36 | 22 | + | IGL | 22 | + |
| exon-exon | IGHV4-30-2 | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | MYC | 8 | - |
| exon-exon | TCP10L | 21 | + | CFAP298 | 21 | + |
| exon-exon | CTCFL | 20 | - | HMGB1P1 | 20 | - |
| exon-exon | CTCFL | 20 | - | HMGB1P1 | 20 | - |
| exon-exon | IGHV3-64 | 14 | - | RNA45SN1 | 21 | + |
| intron-exon | NHS | X | + | PRAMEF12 | | + |
| exon-exon | IGHV3-33 | 14 | - | IGHJ5 | 14 | - |
| exon-intron | IGHV3-33 | 14 | - | IGH | 14 | - |
| exon-exon | IGKV1-33 | 2 | - | IGKV1-9 | | - |
| exon-exon | PAX5 | 9 | - | ETV6 | 12 | + |
| exon-exon | PAX5 | 9 | - | ZNF521 | 18 | - |
| exon-exon | PAX5 | 9 | - | FOXP1 | 3 | - |
| exon-exon | KMT2A | 11 | + | MAML2 | 11 | - |
| exon-intron | LINC01786 | 1 | + | SCNN1D | 1 | + |
| exon-exon | BCR | 22 | + | ABL1 | 9 | + |
| exon-exon | BCR | 22 | + | ABL1 | 9 | + |
| exon-exon | BCR | 22 | + | ABL1 | 9 | + |
| exon-exon | BCR | 22 | + | ABL1 | 9 | + |
| exon-exon | BCR | 22 | + | ABL1 | 9 | + |
| intron-exon | TUBB2B | 6 | + | APBA1 | 9 | - |
| exon-exon | PHOSPHO2 | 2 | + | KLHL23 | 2 | + |
| intron-exon | ADAMTSL2 | | + | PNMA2 | 8 | - |
| exon-exon | SMAP1 | 6 | + | NBEA | 13 | + |
| exon-exon | ADAM22 | | + | RUNDC3B | | + |
| exon-exon | NDUFB8 | 10 | - | SEC31B | 10 | - |
| exon-exon | SSBP2 | 5 | - | ANKRD36C | 2 | - |
| exon-exon | PLPP4 | | + | LOC105378516 | | + |
| exon-intron | ATP5MF-PTCD1 | 7 | - | RPE | 2 | + |
| exon-exon | RAB1A | 2 | - | BCL11A | 2 | - |
| exon-intron | MALAT1 | 11 | + | CSMD3 | | - |
| exon-exon | RNA45SN1 | 21 | + | YTHDF1 | | - |
| intron-exon | SMC1A | X | + | RIBC1 | | + |
| intron-exon | LOC105375268 | | - | MAFG | | - |
| exon-exon | BAIAP2-DT | 17 | - | ZNF282 | 7 | + |
| exon-exon | RNF185 | 22 | + | LIMK2 | 22 | + |
| exon-intron | PRR36 | | - | ELMO2 | 20 | + |
| exon-exon | SLC7A5P2 | 16 | - | SMG1P3 | 16 | - |
| exon-exon | B3GAT2 | 6 | + | B3GAT2 | 6 | - |
| exon-intron | TOMM5 | 9 | - | FBXO10 | 9 | - |
| exon-exon | TP53RK | 20 | - | SLC13A3 | 20 | - |
| exon-exon | LOC652276 | 16 | + | CAMK4 | 5 | + |
| exon-exon | CPD | 17 | - | CPD | 17 | + |
| exon-exon | NBR2 | 17 | + | NBR1 | 17 | + |
| intron-exon | TRNC | MT | + | ZFP36L2 | 2 | - |
| exon-exon | ND2 | MT | + | CYP2A6 | 19 | - |
| exon-intron | HAMP | | + | MYO10 | 5 | + |
| exon-intron | LINC01118 | | + | LINC01119 | | + |
| intron-exon | RNR2 | MT | + | SEMA4A | | + |
| exon-intron | ATP5MF-PTCD1 | 7 | - | TOM1L2 | 17 | - |
| exon-exon | RPL3P7 | 6 | - | PDSS2 | 6 | - |
| exon-exon | GSK3B | 3 | + | SMCO4 | | - |
| exon-intron | PRKACA | 19 | - | ENTPD1-AS1 | 10 | - |
| exon-intron | UBE2E1 | 3 | + | NKIRAS1 | 3 | + |
| exon-exon | ULK4P3 | | + | GOLGA8K | | - |
| exon-intron | KRT17P1 | | + | LOC106020709 | | + |
| exon-intron | OACYLP | | - | LOC112268211 | | - |
| exon-intron | LOC100129935 | | + | LGALS16 | | + |
| exon-exon | PABPC5-AS1 | | - | LOC107985700 | | - |
| exon-exon | PNISR | 6 | - | COQ3 | 6 | - |
| exon-exon | TLCD1 | 17 | + | NEK8 | 17 | + |
| exon-exon | HNRNPA3 | 2 | + | NONO | X | + |
| intron-exon | AC048382.5 | | + | ZSCAN2 | | + |
| intron-exon | LOC105371129 | 16 | + | CLU | 8 | - |
| intron-exon | MID1 | | - | TAGLN | 11 | + |
| exon-exon | MGAT3 | 22 | + | TTC31 | 2 | + |
| exon-exon | NRIP1 | 21 | - | LINC02246 | | - |
| exon-exon | NBPF26 | | + | LINC00623 | 1 | + |
| exon-exon | VANGL1 | 1 | + | PARP12 | 7 | - |
| exon-intron | SNX19 | 11 | - | SLC23A2 | 20 | + |
| exon-exon | LITAF | 16 | - | LOC400499 | | - |
| exon-exon | DYTN | | + | MDH1B | 2 | + |
| exon-intron | COLEC11 | 2 | + | ALLC | | + |
| exon-intron | RPS17 | 15 | - | DNM1P38 | | - |
| exon-exon | RPL37A | 2 | + | DHX57 | 2 | - |
| exon-intron | TMEM94 | 17 | + | AL132780.3 | 14 | - |
| exon-exon | SOX21-AS1 | 13 | + | TM7SF2 | 11 | + |
| exon-intron | LOC105375836 | 8 | + | OPRK1 | 8 | + |
| exon-exon | GPX4 | 19 | - | COX1 | MT | + |
| exon-exon | SNORC | 2 | + | DESI1 | 22 | - |
| exon-exon | ND1 | MT | + | ND2 | MT | + |
| exon-intron | STAT6 | 12 | + | RNR2 | MT | + |
| exon-intron | SLC25A5 | X | - | RNR1 | MT | + |
| exon-exon | GDI1 | X | + | ND2 | MT | + |
| intron-exon | TRNL1 | MT | - | ND1 | MT | - |
| exon-exon | THAP3 | 1 | + | SNRK | 3 | + |
| exon-exon | RPL31P63 | | - | VAMP2 | 17 | - |
| exon-intron | APOE | 19 | - | RNR2 | MT | + |
| exon-intron | APOE | 19 | - | RNR2 | MT | + |
| exon-exon | OSGIN1 | 16 | + | ATP8 | MT | + |
| exon-exon | ATF4 | 22 | - | SNAR-E | | - |
| exon-exon | ATP2B3 | X | - | RNA45SN1 | 21 | + |
| exon-exon | FADS2 | 11 | - | GPM6A | 4 | - |
| exon-exon | SOGA3 | 6 | + | SOGA3 | 6 | - |
| exon-exon | LRRC8A | 9 | - | C17orf80 | 17 | + |
| exon-exon | ATP6 | MT | + | ND2 | MT | + |
| exon-intron | ATP5MC2 | 12 | + | RNR2 | MT | + |
| exon-exon | PEG10 | 7 | - | CLU | 8 | - |
| exon-intron | C2orf49 | 2 | - | RNR2 | MT | + |
| exon-exon | LDOC1 | X | + | DYNC1H1 | 14 | + |
| exon-exon | STUB1 | 16 | - | ND2 | MT | + |
| intron-exon | CEP89 | | + | ND2 | MT | + |
| exon-exon | ATP1B2 | 17 | - | TSC22D3 | X | - |
| exon-exon | USP7 | 16 | + | YWHAB | 20 | + |
| exon-exon | ND4 | MT | - | ABCA5 | 17 | - |
| exon-intron | SH3KBP1 | X | + | CSH1 | 17 | - |
| exon-intron | PDHA1 | X | - | LINC02256 | 15 | - |
| exon-exon | PTPRD | 9 | + | FAU | 11 | - |
| exon-exon | ACTN4 | 19 | + | COX1 | MT | + |
| exon-exon | PDAP1 | 7 | + | ND6 | MT | + |
| exon-exon | WBP2 | 17 | + | FTLP3 | 20 | + |
| intron-exon | MIR503HG | X | + | SCD | 10 | + |
| exon-exon | SPNS2 | 17 | - | ARPC2 | 2 | + |
| exon-exon | OAZ1 | 19 | - | AURKAIP1 | | - |
| exon-exon | ATP6 | MT | - | KLF2 | 19 | + |
| exon-intron | ATP6 | MT | - | NRK | | + |
| exon-intron | SYNE1 | 6 | + | SYNPO | | + |
| exon-exon | INS-IGF2 | 11 | - | CSH1 | 17 | - |
| exon-exon | USB1 | 16 | + | PIDD1 | 11 | - |
| exon-exon | GPR107 | 9 | - | CLIP4 | 2 | + |
| exon-exon | OLFML3 | | + | MALAT1 | 11 | + |
| intron-exon | LOC107985481 | 21 | - | ATP8 | MT | + |
| exon-intron | ARID5B | 10 | - | NOTCH2 | 1 | - |
| exon-exon | CGGBP1 | 3 | + | GTPBP10 | 7 | + |
| exon-exon | PSG6 | 19 | + | RHOBTB3 | 5 | + |
| exon-exon | H2AZ1 | 4 | + | ND2 | MT | + |
| exon-exon | PLXND1 | 3 | + | RDX | 11 | - |
| exon-intron | PDGFRA | 4 | - | CNTNAP3P2 | | + |
| exon-exon | PSG5 | 19 | + | PAPPA | 9 | + |
| intron-exon | LOC112268284 | 21 | - | RNA45SN2 | 21 | + |
| exon-intron | COPZ1 | 12 | - | ATCAY | 19 | - |
| exon-exon | PLAGL1 | 6 | + | DYNC1H1 | 14 | + |
| intron-exon | KDM6A | X | - | PLAC4 | 21 | - |
| exon-exon | ATXN7L3B | 12 | + | COPB2 | 3 | - |
| exon-exon | NR3C1 | 5 | - | NR3C1 | 5 | + |
| exon-exon | STS | X | - | ND6 | MT | + |
| exon-exon | ZNF439 | 19 | - | ND5 | MT | + |
| exon-exon | ATF4 | 22 | - | ATF4 | 22 | + |
| exon-intron | LRRC8A | 9 | - | RANBP17 | 5 | + |
| intron-exon | NR6A1 | 9 | - | PAPPA-AS1 | 9 | - |
| exon-exon | SNAP29 | 22 | - | ND3 | MT | + |
| exon-intron | COX6A1 | 12 | - | GGT7 | 20 | - |
| exon-exon | PSMC5 | 17 | - | COX1 | MT | + |
| intron-exon | CCNH | 5 | - | ATP6 | MT | + |
| exon-exon | SLC3A2 | 11 | + | ND5 | MT | + |
| exon-exon | MCEE | 2 | + | METTL8 | 2 | - |
| exon-exon | KDELR1 | 19 | + | SLC43A2 | 17 | - |
| exon-exon | RAB13 | 1 | + | NOL7 | 6 | + |
| exon-exon | GALNT15 | | - | RBM6 | 3 | + |
| intron-exon | GLUD1 | 10 | + | CRH | | - |
| exon-intron | NUTF2 | 16 | - | RNR2 | MT | + |
| exon-intron | PDK3 | X | - | RNR2 | MT | + |
| intron-exon | SH3KBP1 | X | + | HOPX | 4 | - |
| exon-exon | NBPF15 | 1 | - | EEF1A1P5 | 9 | + |
| exon-exon | RNA45SN2 | 21 | + | CYB561D2 | 3 | + |
| exon-exon | RNA45SN1 | 21 | + | MOBP | 3 | + |
| exon-intron | COX1 | MT | + | ATP6 | MT | + |
| intron-exon | LOC105370733 | 15 | + | EVI2A | 17 | - |
| intron-exon | AGBL3 | | - | AKR1B1 | 7 | - |
| exon-exon | HNRNPA2B1 | 7 | - | CIAO2A | 15 | - |
| exon-exon | FAM171B | 2 | + | FAM171B | 2 | - |
| exon-exon | RPL19 | 17 | + | ALAD | 9 | - |
| exon-intron | RNU6-3P | X | - | TBL3 | 16 | + |
| exon-exon | LOC112268090 | 12 | + | LOC101927966 | | + |
| exon-exon | RNA45SN2 | 21 | + | MED8 | 1 | - |
| intron-exon | RNR2 | MT | + | TPMT | 6 | - |
| exon-exon | CD74 | 5 | - | PHC2 | 1 | - |
| intron-exon | AF228730.5 | | + | LOC105377803 | | + |
| exon-exon | RNA45SN3 | 21 | + | FTL | 19 | + |
| exon-exon | GPM6A | 4 | - | ATP6 | MT | + |
| exon-exon | SMC1A | X | - | SEC31A | 4 | - |
| exon-exon | RNA45SN2 | 21 | + | RTRAF | 14 | + |
| intron-exon | KAT6B | 10 | + | ACSL3 | 2 | + |
| exon-exon | RNU6-5P | 2 | - | FKBPL | 6 | - |
| intron-exon | SOX2-OT | 3 | + | SNCG | 10 | + |
| exon-intron | ANKRD66 | | + | MEP1A | | + |
| exon-intron | MEP1A | | - | ANKRD66 | | - |
| exon-intron | LOC100420547 | | + | GS1-124K5.11 | 7 | + |
| exon-exon | DNAJB11 | | + | LOC100287402 | 3 | + |
| exon-exon | AKAP14 | X | - | NDUFA1 | X | - |
| intron-exon | ECPAS | 9 | - | OR2K2 | | - |
| exon-exon | ARL14EPL | 5 | - | LVRN | | - |
| intron-exon | GOLGA8UP | | - | LOC107984025 | | - |
| exon-exon | LOC107984138 | | + | EXOSC6 | 16 | + |
| exon-intron | XK | | + | AF241726.2 | X | + |
| exon-intron | VWFP1 | | - | ANKRD62P1 | | - |
| exon-intron | CHI3L2 | | + | CHIAP1 | | + |
| exon-exon | MUC2 | 11 | - | CKM | 19 | + |
| exon-intron | CDCP2 | | - | VAV2 | 9 | + |
| intron-exon | AP000553.1 | | + | LOC107985532 | | + |
| intron-exon | AP000553.1 | | - | MIR130B | | - |
| exon-intron | RASAL2 | 1 | + | CLEC20A | | + |
| intron-exon | RP11-477N12.4 | | - | DHRS7C | | - |
| intron-exon | MYLK3 | | - | COL1A1 | 17 | + |
| exon-exon | GNG5 | 1 | + | SERBP1 | 1 | - |
| exon-intron | COCH | 14 | + | GOLGA3 | 12 | + |
| exon-exon | PPP1R10 | 6 | + | COL1A2 | 7 | - |
| exon-exon | ERI1 | 8 | - | COL9A1 | 6 | + |
| exon-intron | RHBDL3 | 17 | - | RPS11 | 19 | + |
| exon-exon | COL9A1 | | + | RPLP0 | 12 | - |
| intron-exon | MYLK3 | | - | COL1A1 | 17 | + |
| exon-exon | SPARC | 5 | - | COL2A1 | 12 | - |
| exon-intron | ND4 | MT | - | DIABLO | | - |
| intron-exon | C1orf112 | 1 | + | SELE | 1 | + |
| exon-intron | DCTD | 4 | - | LOC105377576 | | - |
| intron-exon | MT1CP | | + | MT1B | | + |
| exon-exon | PLGLA | 2 | - | ANAPC1 | 2 | + |
| exon-intron | TREML1 | | + | LOC105375056 | | + |
| exon-exon | SYNE2 | 14 | + | SP110 | 2 | + |
| exon-intron | LPA | 6 | + | AL109933.2 | | + |
| exon-exon | HBS1L | | - | ALDH8A1 | | - |
| exon-exon | MALAT1 | 11 | - | TALAM1 | 11 | - |
| exon-exon | MGST3 | 1 | + | SPOP | 17 | - |
| intron-exon | ASPH | 8 | - | VAT1 | 17 | - |
| exon-exon | RNA45SN3 | 21 | + | MALAT1 | 11 | + |
| intron-exon | RP11-499F3.2 | 15 | - | LOC102723985 | 15 | - |
| exon-exon | SEM1 | 7 | - | HSP90AA1 | 14 | - |
| exon-exon | LIN7C | 11 | - | CD55 | 1 | + |
| exon-exon | RNA45SN3 | 21 | + | MALAT1 | 11 | + |
| exon-exon | PLCG2 | 16 | + | OXCT1 | 5 | - |
| exon-intron | RPL8 | 8 | - | AC009120.6 | | + |
| exon-exon | RNU6-3P | X | - | MALAT1 | 11 | + |
| exon-intron | RNU6-15P | 10 | + | MLLT10 | 10 | + |
| exon-exon | SLF1 | | + | H3P6 | 2 | + |
| exon-intron | RNU6-3P | X | - | MIR4435-2HG | 2 | - |
| intron-exon | RPL24 | 3 | - | GFM1 | 3 | + |
| exon-intron | SNORD13 | 8 | + | RNR1 | MT | + |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN1 | 21 | + |
| exon-intron | RNU6-9 | 19 | + | SEMA4B | 15 | + |
| exon-exon | CNTRL | 9 | + | MALAT1 | 11 | + |
| exon-exon | BABAM1 | 19 | + | MALAT1 | 11 | + |
| exon-exon | LRRFIP1 | 2 | + | NR3C1 | 5 | - |
| exon-intron | NEAT1 | 11 | + | SPON2 | | + |
| exon-exon | RNA45SN3 | 21 | + | SEC24A | 5 | + |
| intron-exon | GNPNAT1 | 14 | + | STYX | 14 | + |
| exon-exon | CHD2 | 15 | + | TPI1 | 12 | + |
| exon-intron | RNA45SN3 | 21 | + | TTC28 | 22 | + |
| exon-intron | RNA45SN3 | 21 | + | RNA18SP5 | 21 | + |
| exon-exon | PIK3C3 | 18 | + | DAB2 | 5 | - |
| intron-exon | RNVU1-14 | 1 | + | ITGB3BP | 1 | - |
| exon-exon | DNAJC3-DT | 13 | - | LUC7L2 | 7 | + |
| intron-exon | BBX | 3 | + | RPL17 | 18 | - |
| exon-intron | RN7SK | 6 | + | SRGAP1 | 12 | + |
| exon-exon | RPSAP58 | 19 | + | SSU72 | 1 | - |
| exon-exon | EMP2 | 16 | - | NRAS | 1 | - |
| intron-exon | DNMBP | 10 | + | PFKP | 10 | + |
| exon-exon | ATP5MPL | 14 | - | SLTM | 15 | - |
| exon-exon | RNA45SN1 | 21 | + | RPS8P8 | 5 | + |
| exon-intron | FAM230C | | + | LOC105374188 | | - |
| exon-exon | DYNC1H1 | 14 | + | CAST | 5 | + |
| exon-intron | MALAT1 | 11 | + | CDH2 | 18 | - |
| exon-intron | C11orf49 | 11 | + | AC013762.1 | 11 | - |
| intron-exon | RFX3 | 9 | - | PABPC1 | 8 | - |
| exon-exon | RNA45SN2 | 21 | + | MALAT1 | 11 | + |
| exon-intron | RNU6-3P | X | - | CHCHD3 | 7 | - |
| exon-exon | RPL10 | X | + | EEF1B2P6 | 7 | - |
| intron-exon | EXT2 | 11 | - | LOC107984328 | | - |
| intron-exon | RNA18SP5 | 21 | + | RPL35 | 9 | - |
| exon-intron | RNA45SN1 | 21 | + | LOC102723560 | | - |
| exon-exon | RN7SL3 | 14 | - | NEAT1 | 11 | + |
| exon-exon | ATP6 | MT | - | TUBA1B | 12 | - |
| exon-exon | RNA45SN2 | 21 | + | MALAT1 | 11 | + |
| exon-exon | ARID5B | 10 | + | RPL13 | 16 | + |
| intron-exon | ADAM32 | | + | MALAT1 | 11 | + |
| exon-exon | PSMD8 | 19 | + | HDLBP | 2 | - |
| exon-exon | RNA45SN2 | 21 | + | MT2A | | + |
| exon-exon | RNA45SN2 | 21 | + | TLE4 | 9 | + |
| exon-intron | RNA45SN1 | 21 | + | CNPY3-GNMT | 6 | - |
| exon-intron | IP6K2 | 3 | - | PPP6R3 | 11 | + |
| exon-exon | ARHGEF3 | 3 | - | MALAT1 | 11 | + |
| intron-exon | RNR2 | MT | + | ND2 | MT | + |
| intron-exon | CPS1 | 2 | - | RPL23 | 17 | - |
| exon-intron | TOR1AIP2 | 1 | - | BMERB1 | 16 | + |
| exon-intron | TALAM1 | 11 | - | PRDM5 | | + |
| exon-intron | BCLAF1 | 6 | - | NPIPB12 | 16 | - |
| exon-exon | RNA45SN2 | 21 | + | MT2P1 | | + |
| exon-exon | MALAT1 | 11 | + | SMN2 | 5 | + |
| exon-exon | ATP5ME | 4 | - | MALAT1 | 11 | + |
| intron-exon | RNR2 | MT | + | CSKMT | 11 | + |
| exon-exon | RBM39 | 20 | - | GOLGB1 | 3 | - |
| exon-intron | RNU6-23P | | - | WASL | 7 | - |
| intron-exon | AC069277.1 | | + | LOC105376944 | | + |
| exon-intron | BZW2 | 7 | + | ZNF735 | 7 | - |
| exon-intron | MALAT1 | 11 | + | MYPN | 10 | + |
| exon-intron | SNHG9 | 16 | + | ABCA7 | 19 | + |
| exon-intron | RNA45SN2 | 21 | + | CDH1 | 16 | + |
| exon-intron | GPI | 19 | + | CALD1 | 7 | + |
| exon-intron | NYAP2 | | + | MFSD14C | 9 | - |
| exon-exon | THG1L | 5 | + | RPL10 | X | + |
| exon-intron | RNA45SN2 | 21 | + | ZDHHC17 | 12 | + |
| exon-exon | RNA45SN3 | 21 | + | MALAT1 | 11 | + |
| exon-exon | H19 | 11 | - | DDIT4 | 10 | + |
| exon-intron | EIF6 | 20 | - | ZNF735 | 7 | - |
| exon-exon | RPL18 | 19 | - | GANAB | 11 | - |
| exon-exon | GAPDH | 12 | + | RPL23 | 17 | - |
| exon-exon | RN7SK | 6 | + | FLNA | X | - |
| exon-intron | NONOP1 | 16 | - | SP1 | 12 | + |
| intron-exon | RNU6-6P | 10 | + | ATR | 3 | - |
| exon-exon | PRPF4 | 9 | + | LOC101928387 | | + |
| intron-exon | TOMM7 | 7 | - | SEC13 | 3 | - |
| intron-exon | RNR2 | MT | + | TMOD3 | 15 | + |
| exon-intron | SEC24C | 10 | - | AC022400.6 | | - |
| intron-exon | TSSK3 | 1 | + | ZFHX3 | | - |
| intron-exon | VPS50 | 7 | + | MALAT1 | 11 | + |
| exon-intron | RNU6ATAC | 9 | - | HS6ST3 | 13 | + |
| exon-intron | RCC1 | 1 | + | LOC105369803 | | - |
| exon-exon | RNA45SN3 | 21 | + | FLNA | X | - |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN1 | 21 | + |
| exon-intron | RNA45SN2 | 21 | + | MRC2 | 17 | + |
| exon-exon | TEX10 | 9 | - | ZBTB20 | 3 | - |
| exon-intron | RNA45SN3 | 21 | + | NPAS2 | 2 | - |
| exon-exon | RNA45SN3 | 21 | + | MALAT1 | 11 | + |
| exon-exon | RNA45SN3 | 21 | + | MALAT1 | 11 | + |
| intron-exon | RNR1 | MT | + | DAB2 | 5 | - |
| exon-exon | RNA45SN2 | 21 | + | RPL13AP5 | 10 | + |
| exon-exon | RNA5S8 | 1 | - | ADAMTS5 | 21 | - |
| exon-exon | BTN2A1 | 6 | + | LAMP1 | 13 | + |
| exon-intron | SBDSP1 | 7 | + | LINC02343 | 13 | + |
| intron-exon | RNA28SP | 21 | + | CALD1 | 7 | + |
| exon-intron | TPI1 | 12 | + | PRRC2B | 9 | - |
| intron-exon | RNR1 | MT | + | ND4 | MT | + |
| exon-exon | YTHDC1 | 4 | + | ING3 | 7 | - |
| exon-intron | WSB1 | 17 | + | TRIO | 5 | + |
| exon-exon | RN7SK | 6 | + | ASPM | | - |
| intron-exon | FRG1DP | | + | FRG1CP | 20 | - |
| exon-intron | KLHL22 | 22 | - | NIPSNAP1 | 22 | - |
| intron-exon | AC012462.3 | | + | LOC105373868 | | + |
| intron-exon | RNA28SP | 21 | + | RNA45SN3 | 21 | + |
| exon-exon | RNA45SN3 | 21 | + | CALD1 | 7 | + |
| intron-exon | LOC101927978 | 16 | + | SFXN1 | 5 | + |
| exon-exon | RPL6P27 | 18 | - | MALAT1 | 11 | + |
| intron-exon | RNR2 | MT | + | MALAT1 | 11 | + |
| exon-intron | RNU6-2 | 19 | + | C5orf22 | | + |
| intron-exon | LINC01924 | | + | TNFAIP2 | 14 | + |
| exon-exon | RPS6 | 9 | - | QARS1 | 3 | - |
| exon-intron | RN7SK | 6 | + | FUS | 16 | + |
| intron-exon | SOX2-OT | 3 | + | RFWD3 | 16 | - |
| intron-exon | RNR2 | MT | + | MYDGF | 19 | - |
| exon-exon | RNA45SN1 | 21 | + | FUBP1 | 1 | - |
| exon-exon | RPL37A | 2 | + | RPL31 | 2 | + |
| exon-exon | MEIKIN | | + | MEIKIN | | - |
| exon-exon | HMGB3P10 | | - | PALMD | | - |
| exon-intron | SP140L | | + | AC009949.1 | 2 | + |
| exon-intron | NUDT7 | 16 | - | SAFB | 19 | + |
| exon-exon | NONO | X | - | RNA45SN2 | 21 | - |
| intron-exon | LINC01515 | | - | SENP6 | 6 | - |
| exon-intron | TERF2IP | 16 | + | RP11-152L20.3 | | + |
| intron-exon | AC009312.1 | | + | PDGFRA | 4 | - |
| exon-exon | RPL41 | 12 | - | NDFIP1 | 5 | - |
| exon-exon | MECR | | + | DNAJB14 | | + |
| exon-intron | CRYGS | | + | RNA18SP5 | 21 | - |
| exon-exon | POLE2 | | + | BHMT | 5 | - |
| intron-exon | GOLIM4 | 3 | + | BHMT | 5 | - |
| intron-exon | LOC105370775 | | + | RGS9 | | + |
| exon-intron | ADAMTSL4 | 1 | + | ADAMTSL4-AS2 | 1 | - |
| intron-exon | HFM1 | 1 | - | NOTCH2 | 1 | - |
| exon-exon | MAPK9 | 5 | + | MAPK9 | 5 | - |
| exon-exon | RNA45SN3 | 21 | + | SLC25A11 | | - |
| intron-exon | RCC1 | 1 | + | ENO1 | 1 | - |
| exon-exon | RNA45SN2 | 21 | + | CLDN5 | | - |
| exon-exon | RNA45SN3 | 21 | + | GPR143 | X | - |
| exon-exon | RNA45SN1 | 21 | + | WIPF2 | 17 | + |
| intron-exon | LINC00393 | | - | BUD23 | 7 | + |
| exon-intron | SPRY4-AS1 | 5 | + | FGF1 | 5 | + |
| exon-exon | RNA45SN2 | 21 | + | JAM2 | 21 | + |
| exon-exon | MOG | 6 | + | CBWD1 | | - |
| exon-intron | NEFL | 8 | - | CACNA2D3 | 3 | + |
| intron-exon | NTM | 11 | + | OTUD7B | 1 | - |
| intron-exon | ARHGAP22 | 10 | - | AQP1 | 7 | + |
| exon-exon | IMP4 | 2 | + | SLCO3A1 | 15 | + |
| exon-exon | B2M | 15 | - | B2M | 15 | + |
| intron-exon | RRP7BP | 22 | - | KAT6B | 10 | + |
| exon-exon | ANKH | 5 | - | EFEMP1 | 2 | - |
| exon-exon | RNA45SN3 | 21 | + | SDC2 | 8 | + |
| exon-exon | TIMP3 | 22 | + | HAPLN3 | 15 | - |
| intron-exon | PTPRVP | 1 | + | MBP | 18 | - |
| intron-exon | PTGDS | 9 | + | SIDT2 | 11 | + |
| intron-exon | DDX3X | X | + | GLTP | 12 | - |
| exon-exon | PLP1 | X | + | CERCAM | 9 | + |
| exon-exon | RAMP2-AS1 | 17 | - | HNRNPA1 | 12 | + |
| exon-exon | ITM2B | 13 | - | ITM2B | 13 | + |
| exon-exon | NTRK2 | 9 | - | NTRK2 | 9 | + |
| intron-exon | RAB9B | X | - | APOD | 3 | - |
| exon-exon | PAIP2B | 2 | - | LAPTM4B | 8 | + |
| exon-exon | RTL8C | X | + | ACADSB | 10 | + |
| intron-exon | ADSS2 | 1 | - | PLOD3 | 7 | - |
| exon-exon | RNA45SN1 | 21 | + | RHOG | 11 | - |
| exon-exon | RNA45SN2 | 21 | + | UBE3B | | + |
| exon-exon | ODAPH | 4 | + | ODAPH | 4 | - |
| exon-exon | COX1 | MT | - | COX1 | MT | + |
| exon-exon | FTH1 | 11 | + | MBOAT2 | 2 | - |
| intron-exon | RNR2 | MT | + | ATP8 | MT | + |
| exon-exon | ND5 | MT | + | ND6 | MT | + |
| exon-exon | HECTD1 | 14 | - | HECTD1 | 14 | + |
| exon-exon | ATP8 | MT | + | ATP6 | MT | + |
| exon-exon | MLLT6 | 17 | + | TUBB | 6 | + |
| intron-exon | ZYG11B | 1 | + | TMEM54 | 1 | - |
| exon-intron | MIR12136 | 1 | + | GMDS | 6 | + |
| exon-exon | ND4L | MT | + | ND4 | MT | + |
| exon-exon | FLOT2 | 17 | + | ZCCHC17 | 1 | + |
| exon-exon | FH | 1 | - | ZFAND3 | 6 | - |
| exon-intron | ATP8 | MT | - | RNR2 | MT | - |
| intron-exon | TRNS1 | MT | - | COX1 | MT | - |
| exon-intron | ND1 | MT | - | RNR2 | MT | - |
| intron-exon | PSMC1 | 14 | + | EEF1A1P5 | 9 | + |
| exon-exon | CAPN12 | 19 | - | ACTN4 | 19 | - |
| exon-intron | CYTB | MT | - | RNR2 | MT | - |
| exon-exon | ATP8 | MT | + | ATP6 | MT | + |
| intron-exon | LOC101928626 | 1 | - | COX1 | MT | - |
| intron-exon | RNR2 | MT | + | ATP6 | MT | + |
| exon-exon | ATP6 | MT | - | ATP6 | MT | + |
| exon-exon | MCM7 | 7 | + | FCF1 | 14 | + |
| exon-exon | RPS8P8 | 5 | - | RPS8P8 | 5 | + |
| intron-exon | RNR2 | MT | + | ATP8 | MT | + |
| exon-exon | NMRAL1 | 16 | - | B4GALT1 | 9 | - |
| exon-intron | COX1 | MT | - | MIR12136 | 1 | + |
| exon-intron | CYTB | MT | - | RNR2 | MT | - |
| exon-intron | MYL6 | 12 | + | POLA1 | X | - |
| exon-exon | ND5 | MT | + | ND6 | MT | + |
| intron-exon | SLC43A2 | 17 | + | NABP2 | 12 | + |
| exon-exon | ATP8 | MT | + | ATP6 | MT | + |
| exon-exon | ND6 | MT | - | ATP6 | MT | + |
| exon-exon | ATP8 | MT | + | ATP6 | MT | + |
| exon-intron | MIR12136 | 1 | + | ZCCHC8 | 12 | + |
| exon-exon | COX1 | MT | + | ND2 | MT | - |
| exon-exon | ACAT2 | 6 | + | IRGQ | 19 | + |
| intron-exon | MTATP6P1 | 1 | - | ATP6 | MT | + |
| exon-intron | SCYL2 | 12 | + | DEPDC4 | 12 | - |
| exon-exon | RPL13A | 19 | + | GTF2IP1 | 7 | - |
| intron-exon | LOC107986620 | 6 | + | RPS14 | 5 | + |
| exon-exon | ND4 | MT | + | C16orf47 | 16 | - |
| exon-intron | ND6 | MT | - | MTATP6P1 | 1 | + |
| exon-intron | SPINT2 | 19 | + | LOC107985960 | 2 | + |
| exon-exon | PA2G4 | 12 | - | PA2G4 | 12 | + |
| exon-exon | CCNI | 4 | + | ATP6 | MT | + |
| exon-exon | ERBIN | 5 | - | ERBIN | 5 | + |
| exon-intron | CYTB | MT | + | CDK19 | 6 | + |
| exon-exon | LDB3 | 10 | + | KRT8P3 | 8 | + |
| exon-exon | ND5 | MT | + | ND6 | MT | + |
| exon-intron | AAAS | 12 | + | RNR2 | MT | - |
| exon-exon | HMGA2 | 12 | + | WIF1 | 12 | - |
| exon-exon | LOC105375463 | 7 | + | CAV2 | | + |
| exon-exon | NUP98 | 11 | - | PHF23 | 17 | - |
| exon-exon | CAV2 | 7 | + | CAV1 | 7 | + |
| exon-exon | LOC105375463 | 7 | + | CAV2 | | + |
| intron-exon | TMPRSS2 | 21 | - | ERG | 21 | - |
| exon-exon | TRBJ2-1 | 7 | + | TRBD2 | 7 | + |
| exon-intron | TRBJ2-1 | 7 | + | TRBD2 | 7 | + |
| exon-intron | TRBJ2-1 | 7 | + | TRBD2 | 7 | + |
| intron-exon | TRBJ2-4 | 7 | + | TRBD2 | 7 | + |
| exon-exon | KAT6A | 8 | - | NCOA2 | 8 | - |
| exon-exon | KMT2A | 11 | + | MLLT3 | 9 | - |
| exon-exon | BCR | 22 | + | ABL1 | 9 | + |
| exon-exon | PRKAR1A | 17 | + | RARA | 17 | + |
| exon-exon | PRKAR1A | 17 | + | RARA | 17 | + |
| exon-exon | FGFR1 | 8 | - | PLAG1 | 8 | - |
| exon-exon | PML | 15 | + | RARA | 17 | + |
| exon-intron | IGHV4-34 | 14 | - | IGH | 14 | - |
| exon-exon | IGHV3-69-1 | 14 | - | IGHV3-48 | 14 | - |
| exon-intron | IGHV3-30 | 14 | - | IGH | 14 | - |
| intron-exon | CASC21 | 8 | + | GCNT2 | 6 | + |
| exon-intron | COPS7B | 2 | - | ADAMTS12 | 5 | + |
| exon-exon | TCF3 | 19 | - | ZNF384 | 12 | - |
| exon-exon | IGLV3-1 | 22 | + | IGLL5 | 22 | + |
| exon-intron | GBP4 | 1 | - | LOC105378842 | | - |
| exon-intron | LOC107987320 | | + | LOC442028 | | - |
| exon-intron | LOC107987320 | | + | LOC107984037 | | + |
| exon-intron | NCOR1P2 | | - | ABBA01006766.1 | | - |
| exon-intron | NCOR1P2 | | - | ABBA01006766.1 | | - |
| intron-exon | LOC105369535 | | - | SORL1 | 11 | - |
| intron-exon | AC104634.2 | | + | TEX44 | | + |
| exon-exon | FAM25E | | + | PARGP1-AGAP4 | 10 | + |
| intron-exon | LINC00323 | | + | LOC107985495 | | + |
| exon-exon | ELF5 | | - | ELF5 | 11 | + |
| intron-exon | LOC101927846 | | + | GOLGA8IP | | + |
| exon-exon | FAM230B | | - | LOC112268299 | | - |
| exon-exon | GPR176 | | - | FSIP1 | 15 | - |
| exon-intron | LOC107984455 | 12 | + | PUS1 | 12 | + |
| exon-exon | LOC101059948 | 19 | - | CGB3 | | - |
| exon-exon | TCAF2 | 7 | + | TCAF2P1 | 7 | + |
| exon-intron | TCAF2 | 7 | + | TCAF2P1 | 7 | + |
| exon-intron | AP1B1P1 | | + | Z83839.2 | | + |
| exon-exon | NUTM2A | 10 | + | HSPD1 | 2 | - |
| exon-intron | SLC22A25 | 11 | - | SLC22A10 | 11 | - |
| exon-intron | RAD50 | 5 | + | TH2LCRR | | - |
| intron-exon | ST7 | 7 | + | TPM3P1 | | - |
| exon-exon | ENPP1 | | + | ENPP1 | | - |
| intron-exon | CRAT | | + | CRAT | 9 | - |
| intron-exon | ST7 | 7 | + | TPM3P1 | | - |
| exon-intron | COX1 | MT | + | ND4 | MT | + |
| exon-exon | LILRA1 | 19 | + | RAB11B | 19 | - |
| intron-exon | AC245884.5 | | + | LILRA1 | | - |
| exon-exon | LILRB1 | 19 | + | LILRA1 | | - |
| intron-exon | HBA-LCR | 16 | + | NPRL3 | 16 | - |
| intron-exon | AP000282.2 | | - | LINC00945 | | - |
| exon-intron | OLIG1 | 21 | - | AP000282.2 | | - |
| exon-intron | ACTB | 7 | - | EGR2 | | + |
| exon-intron | MPG | 16 | - | ENTPD6 | 20 | - |
| exon-exon | HOXA13 | | + | SNRPD1 | 18 | - |
| exon-intron | LILRA1 | 19 | + | AC245884.5 | | - |
| exon-exon | PITPNA | 17 | - | TRANK1 | 3 | - |
| intron-exon | UBXN7 | 3 | + | SETX | 9 | + |
| exon-intron | B2M | 15 | + | NOP14-AS1 | 4 | + |
| exon-exon | PRPF38A | 1 | + | B2M | 15 | - |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-exon | KRT10 | 17 | + | KRT10 | 17 | - |
| exon-intron | RPS27 | 1 | - | LOC105377043 | 3 | - |
| exon-exon | RAB18 | 10 | - | RAB18 | 10 | + |
| exon-exon | ATP6 | MT | - | KRT10 | 17 | - |
| exon-exon | TRGV2 | | - | TARP | | - |
| exon-exon | IGLV2-18 | | + | IGLV2-8 | | + |
| exon-intron | ITPKB | 1 | - | SIAH1 | 16 | + |
| exon-exon | GSTA4 | | + | BAG6 | 6 | - |
| exon-exon | FH | 1 | + | KAT6A | 8 | - |
| exon-exon | RNF145 | 5 | + | RPS25 | 11 | - |
| exon-intron | WBP1P1 | | - | RGPD1 | 2 | - |
| intron-exon | AC007376.2 | | - | LOC105370577 | | - |
| intron-exon | EVL | 14 | + | TRAPPC3 | 1 | + |
| exon-exon | ATP6V0D1 | 16 | - | NEUROD2 | | - |
| exon-exon | ATP6 | MT | - | ARSG | 17 | + |
| exon-intron | S100A6 | 1 | - | RASA4DP | 7 | - |
| exon-exon | TBR1 | 2 | - | SLC9A6 | | + |
| intron-exon | AC104938.1 | | + | MYO9A | 15 | + |
| exon-exon | PMEL | 12 | - | POLL | 10 | - |
| exon-exon | ZFR2 | 19 | + | RPL31P49 | | + |
| exon-intron | SAG | 2 | + | DMD | X | + |
| intron-exon | RPL13AP5 | 10 | - | NOL12 | | + |
| exon-exon | KAT14 | 20 | - | GAPDHP48 | | - |
| intron-exon | PDE9A | 21 | - | CRYBA4 | 22 | + |
| exon-exon | PCNX2 | 1 | + | PCNX2 | 1 | - |
| exon-intron | GABARAPL1 | 12 | - | PTPN14 | 1 | - |
| exon-intron | SYNPO | 5 | + | SUSD1 | 9 | - |
| intron-exon | ASXL1 | 20 | + | RHO | 3 | + |
| exon-intron | CALR | 19 | + | SPAG9 | 17 | + |
| exon-exon | CHPF2 | 7 | - | CHPF2 | 7 | + |
| exon-intron | RHO | 3 | + | GNG7 | 19 | + |
| exon-intron | LOC100287430 | | - | TTC28 | 22 | + |
| exon-intron | RPL37A | 2 | + | LINC00871 | | + |
| intron-exon | RNR2 | MT | - | NUDT5 | 10 | - |
| exon-intron | TSC22D1 | 13 | + | RNR2 | MT | + |
| exon-exon | LZTR1 | | - | RPL23A | 17 | + |
| exon-intron | SEPT5-GP1BB | 22 | + | SHANK2 | 11 | - |
| exon-intron | RPL28 | 19 | + | CHODL | | + |
| exon-exon | SLMO2-ATP5E | 20 | + | RPL4 | 15 | - |
| exon-intron | CYTL1 | | + | FES | | + |
| exon-exon | ND4 | MT | + | CRYBA1 | | + |
| exon-intron | RPL28 | 19 | + | LRP1B | 2 | - |
| exon-intron | NDUFB2 | 7 | + | COG5 | 7 | - |
| exon-intron | CAPNS1 | 19 | + | NRG1 | 8 | - |
| exon-intron | RPLP2 | 11 | + | CTCF | 16 | - |
| exon-exon | DBI | 2 | + | UBB | 17 | + |
| exon-intron | GLUD1P2 | | - | LOC107984026 | | - |
| exon-exon | JCAD | 10 | + | TOMM7 | 7 | - |
| exon-intron | COX3 | MT | + | LINC02869 | 1 | - |
| exon-intron | IFT43 | | + | HS3ST4 | 16 | + |
| exon-exon | FTH1P10 | 5 | - | C11orf58 | 11 | + |
| exon-intron | ND4 | MT | - | RNR2 | MT | + |
| intron-exon | LY96 | 8 | + | EML4 | 2 | + |
| intron-exon | AKIRIN2 | | - | RD3 | 1 | - |
| exon-intron | ND4 | MT | + | SRC | 20 | - |
| exon-exon | ND5 | MT | + | CYTB | MT | + |
| exon-intron | LOC107984974 | | - | LOC105373182 | X | + |
| exon-exon | POLR2L | 11 | + | TPT1 | 13 | - |
| exon-intron | COX3 | MT | + | CCDC192 | 5 | - |
| exon-exon | SQSTM1 | 5 | + | SQSTM1 | 5 | - |
| exon-exon | SH3BGRL2 | | - | JUND | 19 | - |
| exon-exon | BRI3 | 7 | - | SUOX | 12 | + |
| intron-exon | GARS1 | 7 | - | COX2 | MT | + |
| exon-intron | CECR7 | 22 | + | AC006946.2 | 22 | + |
| intron-exon | RPL31P4 | 14 | - | METTL7A | 12 | + |
| exon-exon | RAB41 | | - | PRDM8 | 4 | + |
| exon-exon | GNB1 | 1 | - | PEX2 | 8 | - |
| intron-exon | AC079140.6 | 4 | - | LOC105374336 | 4 | - |
| exon-intron | STX17-AS1 | 9 | - | NR4A3 | 9 | - |
| exon-intron | ERO1A | 14 | - | CRYL1 | 13 | + |
| intron-exon | TAB2 | 6 | - | SRSF3 | 6 | + |
| exon-exon | MAP1B | 5 | - | MAP1B | 5 | + |
| exon-exon | HDLBP | 2 | - | ACTB | 7 | - |
| exon-exon | LRRFIP2 | 3 | - | BGN | X | + |
| intron-exon | SOX2-OT | 3 | + | UBE2J2 | 1 | - |
| exon-exon | TIA1 | 2 | + | TIA1 | 2 | - |
| exon-intron | FSTL5 | 4 | - | AC104793.1 | | - |
| intron-exon | MTATP6P1 | 1 | - | CS | 12 | + |
| exon-exon | CPNE8 | 12 | - | ESYT1 | 12 | - |
| exon-exon | IFRD1 | 7 | + | CISD1 | 10 | + |
| exon-exon | ANXA2 | 15 | - | PABPC1 | 8 | + |
| exon-intron | MFAP4 | 17 | + | SOCS5 | 2 | - |
| exon-intron | RBM3 | X | - | NXN | 17 | - |
| exon-intron | ZKSCAN7 | 3 | - | DLC1 | 8 | - |
| exon-exon | ATF4 | 22 | - | RPS19P1 | 20 | + |
| exon-exon | VMP1 | 17 | - | FDFT1 | 8 | + |
| exon-exon | TRIM48 | 11 | + | SLC38A2 | 12 | - |
| exon-exon | OXA1L | 14 | - | HLA-DMA | 6 | + |
| exon-exon | SLC26A2 | 5 | + | FGD5-AS1 | 3 | + |
| exon-exon | MIR3142HG | 5 | + | PSD3 | 8 | - |
| exon-exon | MRPL10 | 17 | - | PLP1 | X | + |
| exon-intron | HMGA2 | 12 | + | AC119674.2 | | - |
| exon-exon | TRAJ45 | 14 | + | TRAC | 14 | + |
| exon-exon | CRTC3 | 15 | + | MAML2 | 11 | - |
| exon-exon | TMPRSS2 | 21 | - | ETV1 | 7 | - |
| exon-exon | RUNX1 | 21 | - | SH3D19 | 4 | - |
| exon-exon | RUNX1 | 21 | - | SH3D19 | 4 | - |
| exon-intron | RUNX1 | 21 | - | ZNF687 | 1 | + |
| intron-exon | ZDHHC1 | 16 | + | ABL1 | 9 | + |
| exon-exon | TCF3 | 19 | - | ZNF384 | 12 | - |
| exon-intron | NOP2 | 12 | - | TCF3 | 19 | - |
| exon-intron | TCF3 | 19 | - | ZNF384 | 12 | - |
| exon-exon | BCR | 22 | + | ABL1 | 9 | + |
| exon-exon | BCR | 22 | + | ABL1 | 9 | + |
| intron-exon | BCR | 22 | + | ABL1 | 9 | + |
| exon-intron | IGHV3-53 | 14 | - | IGH | 14 | - |
| exon-intron | IGHV3-7 | 14 | - | IGH | 14 | - |
| exon-intron | IGHV3-30 | 14 | - | IGH | 14 | - |
| exon-exon | HMGA2 | 12 | + | WIF1 | 12 | - |
| exon-exon | HMGA2 | 12 | + | WIF1 | 12 | - |
| exon-exon | HMGA2 | 12 | + | WIF1 | 12 | - |
| exon-exon | NEAT1 | 11 | + | MIF4GD | | - |
| exon-intron | IGHV3-64D | 14 | - | IGH | 14 | - |
| exon-exon | EWSR1 | 22 | + | ZNF384 | 12 | - |
| exon-exon | TRAJ28 | | + | TRAC | 14 | + |
| exon-intron | TRAV41 | 14 | + | TRA | 14 | + |
| exon-intron | BCR | 22 | + | ABL1 | 9 | + |
| exon-intron | BCR | 22 | + | ABL1 | 9 | + |
| exon-exon | TRAJ6 | 14 | + | TRAC | 14 | + |
| exon-exon | TRAJ35 | | + | TRAC | 14 | + |
| exon-intron | TMPRSS2 | 21 | - | ERG | 21 | - |
| exon-intron | BCR | 22 | + | ABL1 | 9 | + |
| exon-exon | LOC284685 | 1 | - | FLI1 | 11 | + |
| intron-exon | PNRC2 | 1 | - | CNR2 | 1 | - |
| exon-intron | IGHV3-62 | | - | IGH | 14 | - |
| exon-exon | DDX5 | 17 | - | ETV4 | 17 | - |
| exon-exon | TRAJ52 | | + | TRAC | 14 | + |
| exon-intron | IGHV2-5 | 14 | - | IGH | 14 | - |
| exon-intron | IGHV3-49 | 14 | - | FAM30A | 14 | - |
| exon-intron | IGHV3-49 | 14 | - | FAM30A | 14 | - |
| intron-exon | AC129492.2 | 17 | + | ETV1 | 7 | - |
| intron-exon | CANT1 | 17 | - | ETV4 | 17 | - |
| exon-exon | TMPRSS2 | 21 | - | ETV4 | 17 | - |
| exon-intron | ASPH | 8 | - | LINC02842 | 8 | - |
| exon-exon | TRAJ58 | 14 | + | TRAC | 14 | + |
| exon-exon | TRAJ8 | | + | TRAC | 14 | + |
| intron-exon | TRA | 14 | + | TRAC | 14 | + |
| exon-exon | SERPINB1 | 6 | + | SERPINB1 | 6 | - |
| exon-exon | HBP1 | 7 | - | TOB1 | 17 | - |
| exon-intron | PPP2R3A | 3 | + | LINC02237 | 8 | - |
| intron-exon | SWT1 | 1 | + | NCBP3 | 17 | + |
| exon-exon | PLCG1-AS1 | 20 | - | TOP1 | 20 | - |
| exon-exon | PABPC1P4 | 12 | - | ARID5B | 10 | + |
| exon-intron | HSPA8 | 11 | - | LINC01146 | | - |
| exon-exon | ALDH18A1 | 10 | - | CALCOCO2 | 17 | + |
| exon-exon | RPS26P58 | X | - | FEZ2 | 2 | + |
| exon-exon | BCO2 | 11 | + | MYLPF | 16 | - |
| exon-exon | TTN-AS1 | 2 | + | EIF4G1 | 3 | - |
| intron-exon | MYHAS | 17 | + | CYSTM1 | 5 | + |
| exon-exon | RTN3 | 11 | + | KHDRBS1 | 1 | + |
| exon-exon | TTN | 2 | + | TTN | 2 | - |
| intron-exon | TTN-AS1 | 2 | + | TTN | 2 | - |
| exon-exon | NACA | 12 | - | ANK2 | 4 | - |
| exon-exon | CAB39 | 2 | + | CAB39 | 2 | - |
| exon-exon | NCBP2 | 3 | + | UQCRQ | 5 | + |
| intron-exon | TPT1 | 13 | - | CSNK1D | 17 | + |
| exon-exon | CKM | 19 | + | CKM | 19 | - |
| intron-exon | LOC101927572 | 19 | + | SREBF2 | 22 | - |
| exon-intron | HLA-E | 6 | + | ATAT1 | 6 | + |
| intron-exon | PTPRD | 9 | - | LINC02802 | 1 | - |
| exon-exon | RAB3GAP1 | 2 | + | TUBB | 6 | + |
| exon-exon | UCHL5 | 1 | - | HDAC2 | 6 | - |
| intron-exon | SOX2-OT | 3 | + | LMO7 | 13 | + |
| exon-exon | ITIH2 | 10 | + | HMCES | 3 | + |
| intron-exon | PVT1 | 8 | - | TP53BP1 | 15 | + |
| intron-exon | TSPAN9 | 12 | + | CS | 12 | + |
| exon-exon | CBX5 | 12 | + | GDI1 | X | - |
| intron-exon | TM6SF1 | 15 | + | CD24 | 6 | + |
| exon-exon | NEK5 | 13 | - | ALG11 | 13 | - |
| intron-exon | NCOA3 | 20 | + | HACD2 | 3 | - |
| exon-exon | PKD1P3-NPIPA1 | 16 | - | PKD1P3-NPIPA1 | 16 | + |
| exon-exon | BAHD1 | 15 | - | BAHD1 | 15 | + |
| exon-exon | BTBD9 | 6 | - | BTBD9 | 6 | + |
| intron-exon | PBLD | 10 | + | ADH1B | 4 | - |
| exon-exon | HSPB6 | 19 | - | EEF2 | 19 | - |
| exon-exon | SLC35E2A | 1 | + | USP36 | 17 | - |
| exon-exon | TCAP | 17 | + | COMTD1 | 10 | - |
| exon-exon | TTN | 2 | - | SLC25A3 | 12 | + |
| exon-exon | GTF2A2 | 15 | + | LDB3 | 10 | + |
| exon-exon | BAG6 | 6 | + | COQ8A | 1 | + |
| exon-exon | CAP2 | 6 | - | CCDC28B | 1 | + |
| intron-exon | AC026748.3 | 5 | + | CKM | 19 | - |
| exon-intron | SNRPD2 | 19 | - | AL139035.2 | 13 | - |
| exon-intron | LOC100996723 | 1 | + | AC245297.3 | 1 | - |
| exon-exon | NEAT1 | 11 | - | EEF1G | 11 | - |
| exon-exon | CDX2 | 13 | + | CDX2 | 13 | - |
| intron-exon | LONP1 | 19 | - | ELFN1-AS1 | 7 | - |
| exon-exon | FBXO7 | 22 | + | ATP6 | MT | + |
| exon-exon | MORC3 | | + | CHAF1B | | + |
| exon-exon | IL10RB-DT | 21 | + | IL10RB | 21 | + |
| intron-exon | DRG1 | 22 | + | SFI1 | 22 | + |
| intron-exon | IL10RB | 21 | - | IFNAR2 | 21 | - |
| exon-exon | TRAJ23 | | + | TRAC | 14 | + |
| exon-exon | ABHD14B | 3 | - | TMEM231 | 16 | - |
| exon-exon | HJURP | 2 | + | INPP4A | 2 | - |
| exon-exon | USP10 | 16 | + | ZDHHC7 | 16 | - |
| exon-exon | EIF4E2 | 2 | - | HJURP | 2 | + |
| exon-exon | RC3H2 | 9 | - | RGS3 | 9 | + |
| exon-intron | HMGA2 | 12 | + | LOC107984526 | 12 | - |
| exon-intron | HMGA2 | 12 | + | LOC105369898 | 12 | - |
| exon-exon | TRAJ9 | | + | TRAC | 14 | + |
| exon-exon | EWSR1 | 22 | + | NFATC2 | 20 | - |
| exon-exon | NDRG1 | 8 | - | ERG | 21 | - |
| exon-exon | RPL27 | 17 | + | NME1-NME2 | 17 | + |
| exon-exon | RPL27 | 17 | + | NME1-NME2 | 17 | + |
| exon-exon | TRAJ24 | | + | TRAC | 14 | + |
| exon-exon | TRAJ20 | | + | TRAC | 14 | + |
| exon-exon | TRAJ50 | | + | TRAC | 14 | + |
| exon-exon | SLC45A3 | 1 | - | ELK4 | 1 | - |
| exon-intron | IGHV3-53 | 14 | - | IGH | 14 | - |
| exon-exon | MYB | 6 | + | NFIB | 9 | - |
| exon-exon | KMT2A | 11 | + | ACTN4 | 19 | + |
| exon-exon | KMT2A | 11 | + | TET1 | 10 | + |
| exon-exon | TET1 | 10 | + | KMT2A | 11 | + |
| exon-exon | TET1 | 10 | + | KMT2A | 11 | + |
| exon-exon | SRGAP3 | 3 | - | RAF1 | 3 | - |
| exon-exon | TFIP11 | 22 | - | SRRD | 22 | - |
| exon-exon | TALAM1 | 11 | - | MALAT1 | 11 | - |
| exon-exon | AKTIP | 16 | - | RBL2 | 16 | - |
| exon-intron | BCR | 22 | + | ABL1 | 9 | + |
| intron-exon | ABL1 | 9 | + | BCR | 22 | + |
| intron-exon | ABL1 | 9 | + | BCR | 22 | + |
| exon-intron | MYC | 8 | + | IGK | 2 | - |
| intron-exon | PVT1 | 8 | + | IGKV2-28 | 2 | - |
| exon-intron | MYC | 8 | + | IGKJ2 | 2 | - |
| intron-exon | PVT1 | 8 | + | IGKV4-1 | 2 | + |
| exon-exon | RUNX1 | 21 | - | USP42 | 7 | + |
| intron-exon | USP42 | 7 | + | RUNX1 | 21 | - |
| exon-exon | RPL13A | 19 | + | AGO1 | 1 | + |
| exon-exon | ERP29 | 12 | + | ACAD10 | 12 | + |
| exon-exon | MAN2C1 | 15 | - | SIN3A | 15 | - |
| exon-exon | HIRA | 22 | - | UFD1 | 22 | - |
| exon-exon | RUFY2 | 10 | - | HNRNPH3 | 10 | + |
| exon-exon | RBMS2 | 12 | + | SARNP | 12 | - |
| exon-exon | PRMT2 | 21 | + | SNX5 | 20 | - |
| exon-exon | KIFC3 | 16 | - | CNGB1 | | - |
| exon-exon | HNRNPL | 19 | - | ERCC2 | | - |
| exon-exon | DAP | 5 | - | WASF1 | 6 | - |
| exon-exon | RELB | | + | SMIM14 | 4 | - |
| exon-exon | PEPD | 19 | - | RELB | | + |
| exon-exon | GNS | 12 | - | SLC38A2 | 12 | - |
| exon-exon | GLG1 | 16 | - | FA2H | 16 | - |
| exon-exon | FAM120A | 9 | + | FGD3 | 9 | + |
| exon-exon | CD44 | 11 | + | PDHX | 11 | + |
| exon-exon | BCR | 22 | + | PI4KA | 22 | - |
| exon-exon | VAPA | 18 | + | RAB31 | 18 | + |
| exon-exon | MET | 7 | + | CAV1 | 7 | + |
| exon-exon | ZMYND8 | 20 | - | IARS1 | 9 | - |
| exon-exon | SNRNP70 | 19 | + | MRPL52 | 14 | + |
| exon-exon | NIN | 14 | - | ABHD12B | | + |
| exon-exon | MAML3 | 4 | - | ARHGAP10 | 4 | + |
| exon-exon | FUBP1 | 1 | - | IVNS1ABP | 1 | - |
| exon-exon | KIAA1217 | 10 | + | RNF17 | 13 | + |
| exon-exon | FTH1 | 11 | - | NUP107 | 12 | + |
| exon-exon | FLNB | 3 | + | SLMAP | 3 | + |
| exon-exon | ELF1 | 13 | - | C4orf45 | | - |
| exon-exon | EEF1A1 | 6 | - | PSMD14 | 2 | + |
| exon-exon | CWC25 | 17 | - | FBXO47 | | - |
| exon-exon | CANX | 5 | + | EEF1A1P5 | 9 | + |
| exon-exon | TMEM259 | 19 | - | SBNO2 | 19 | - |
| exon-exon | RABEP1 | 17 | + | ALG14 | | - |
| exon-exon | MAP4 | 3 | - | SMARCC1 | 3 | - |
| exon-exon | MMP24-AS1-EDEM2 | 20 | - | DNAH14 | 1 | + |
| exon-exon | SMG1 | 16 | - | SLC25A3 | 12 | + |
| exon-exon | RPS20 | 8 | - | MYH9 | 22 | - |
| exon-exon | MMS19 | 10 | - | NOLC1 | 10 | + |
| exon-exon | GPSM2 | 1 | + | CHP2 | | + |
| exon-exon | SPC24 | | - | KANK2 | 19 | - |
| exon-exon | SCARB1 | 12 | - | DHX37 | | - |
| exon-exon | PYGB | 20 | + | ENTPD6 | 20 | + |
| exon-exon | ELL | 19 | - | FKBP8 | 19 | - |
| exon-exon | CD59 | 11 | - | FBXO3 | 11 | - |
| exon-exon | C16orf70 | 16 | + | CBFB | 16 | + |
| exon-exon | STX17 | 9 | + | NR4A3 | 9 | + |
| exon-exon | STX17 | 9 | + | INVS | 9 | + |
| exon-exon | PUS1 | | + | ULK1 | 12 | + |
| exon-exon | NUP93 | 16 | + | CYB5B | 16 | + |
| exon-exon | NRG2 | | - | UBE2D2 | 5 | + |
| exon-exon | HSD17B2 | | + | CDH1 | 16 | + |
| exon-exon | C7orf50 | 7 | - | ADAP1 | 7 | - |
| exon-exon | SNAP47 | | + | OXA1L | | + |
| exon-exon | ARHGAP21 | 10 | - | ARMC4 | 10 | - |
| exon-exon | SLC25A24 | | - | SEC11C | 18 | + |
| exon-exon | RND3 | 2 | - | TMEM87B | 2 | + |
| exon-exon | NGLY1 | 3 | - | MAP4 | 3 | - |
| exon-exon | HDAC2 | 6 | - | AK9 | 6 | - |
| exon-exon | VARS1 | 6 | - | EHMT2 | 6 | - |
| exon-exon | TTC12 | | + | CHMP1A | 16 | - |
| exon-exon | TMEM44 | 3 | - | LSG1 | 3 | - |
| exon-exon | TAOK1 | 17 | + | CCDC144A | 17 | + |
| exon-exon | SNTB2 | 16 | + | IL34 | | + |
| exon-exon | PPP4R3B | 2 | - | CHMP1A | 16 | - |
| exon-exon | APOLD1 | 12 | + | CREBL2 | 12 | + |
| exon-exon | SETX | 9 | - | TNRC6A | 16 | + |
| exon-exon | MICALL2 | | - | CCL17 | | + |
| exon-exon | FAM20C | 7 | + | RAPGEF1 | 9 | - |
| exon-exon | CBFB | 16 | + | FCSK | 16 | + |
| exon-exon | CACYBP | 1 | + | RABGAP1L | 1 | + |
| exon-exon | C7orf50 | 7 | - | MICALL2 | 7 | - |
| exon-exon | BCAS4 | 20 | + | ADNP | 20 | - |
| exon-exon | ADAMTS2 | | - | RNF130 | 5 | - |
| exon-exon | KMT2A | 11 | + | AFDN | 6 | + |
| exon-exon | HECTD1 | 14 | - | STK4 | 20 | + |
| exon-exon | RPS6KA5 | 14 | - | ZBP1 | | - |
| exon-exon | ARID4A | 14 | + | NCOA5 | | - |
| exon-exon | SNTB2 | 16 | + | UTP4 | 16 | + |
| exon-exon | RAB3GAP1 | 2 | + | CHMP1A | 16 | - |
| exon-exon | OLFML3 | | + | NEB | 2 | - |
| exon-exon | ING3 | 7 | + | IVNS1ABP | 1 | - |
| exon-exon | HEXIM2 | | + | NMT1 | 17 | + |
| exon-exon | ANAPC1 | 2 | - | PSMB7 | 9 | - |
| exon-exon | ADAM9 | 8 | + | ANKFY1 | 17 | - |
| exon-exon | NTPCR | | + | THAP4 | | - |
| exon-exon | VPS45 | 1 | + | SC5D | 11 | + |
| exon-exon | USP34 | 2 | - | CCT4 | 2 | - |
| exon-exon | TTC7A | 2 | + | FSHR | | - |
| exon-exon | TMEM25 | | + | TECTA | 11 | + |
| exon-exon | TCERG1 | 5 | + | RBM27 | 5 | + |
| exon-exon | SRF | 6 | + | NEK9 | 14 | - |
| exon-exon | SNED1 | 2 | + | FARP2 | 2 | + |
| exon-exon | PRAME | | - | GDI2 | 10 | - |
| exon-exon | PAFAH1B2 | 11 | + | CCDC84 | 11 | + |
| exon-exon | MCM4 | 8 | + | PRKDC | 8 | - |
| exon-exon | IPO4 | 14 | - | MBD3 | 19 | - |
| exon-exon | HAND2 | 4 | - | LPCAT1 | 5 | - |
| exon-exon | DCP2 | 5 | + | REEP5 | 5 | - |
| exon-exon | CDH4 | | + | SET | 9 | + |
| exon-exon | AP4B1 | | - | CSDE1 | 1 | - |
| exon-exon | YTHDC2 | 5 | + | ST13 | 22 | - |
| exon-exon | WDSUB1 | 2 | - | NUF2 | 1 | + |
| exon-exon | EIPR1 | 2 | - | TSPAN7 | X | + |
| exon-exon | SLC25A12 | | - | ARL14EP | | + |
| exon-exon | RPL12 | 9 | - | RGCC | | + |
| exon-exon | DENND5A | 11 | - | TMEM41B | 11 | - |
| exon-exon | HSP90AA1 | 14 | - | NFRKB | 11 | - |
| exon-exon | LEF1 | 4 | - | HADH | 4 | + |
| exon-exon | GRAMD4 | | + | SET | 9 | + |
| exon-exon | FAM133B | 7 | - | CDK6 | 7 | - |
| exon-exon | CEP131 | | - | ACAP1 | | + |
| exon-exon | UVSSA | 4 | + | MAEA | 4 | + |
| exon-exon | IGFBP7 | 4 | - | POLR2B | 4 | + |
| exon-exon | PIP5K1A | | + | GABPB2 | 1 | + |
| exon-exon | NBR1 | 17 | + | MYH11 | 16 | - |
| exon-exon | KIF24 | 9 | - | GNE | 9 | - |
| exon-exon | FUT8 | 14 | + | CTNNA1 | 5 | + |
| exon-exon | RPL29 | 3 | - | IFI44L | 1 | + |
| exon-exon | RHOD | | + | C11orf86 | | + |
| exon-exon | DYSF | 2 | + | ZNF638 | 2 | + |
| exon-exon | RAD18 | 3 | - | FANCD2 | 3 | + |
| exon-exon | ARMC9 | 2 | + | LRRFIP1 | 2 | + |
| exon-exon | WDR6 | 3 | + | CRK | 17 | - |
| exon-exon | WDR27 | 6 | - | QKI | 6 | + |
| exon-exon | HDDC2 | 6 | - | SRPK1 | 6 | - |
| exon-exon | BSG | 19 | + | GZMM | | + |
| exon-exon | COL26A1 | | + | CTXN1 | | - |
| exon-exon | ZNF782 | 9 | - | SYTL2 | | - |
| exon-exon | TRAF2 | 9 | + | TPRN | 9 | - |
| exon-exon | TNPO3 | 7 | - | ZC3HAV1 | 7 | - |
| exon-exon | STK11 | 19 | + | MAEA | 4 | + |
| exon-exon | SLCO4A1 | 20 | + | ADRM1 | 20 | + |
| exon-exon | SH3GL1 | 19 | - | TPRN | 9 | - |
| exon-exon | REEP4 | | - | CDH17 | 8 | - |
| exon-exon | PPM1B | | + | FAS | | + |
| exon-exon | NT5C3A | | - | MAP4 | 3 | - |
| exon-exon | DHX9 | 1 | + | EP300 | 22 | + |
| exon-exon | MEGF6 | | - | MUL1 | 1 | - |
| exon-exon | SHTN1 | 10 | - | OAT | | - |
| exon-exon | JUP | 17 | - | ANKRD52 | 12 | - |
| exon-exon | KDM7A | | - | NDUFB2 | 7 | + |
| exon-exon | GCA | 2 | + | PSMD14 | 2 | + |
| exon-exon | EDF1 | 9 | - | TPRN | 9 | - |
| exon-exon | CREBL2 | 12 | + | FAM234B | 12 | + |
| exon-exon | CHAF1A | 19 | + | CCND1 | 11 | + |
| exon-exon | GOLM2 | 15 | + | LINGO1 | | - |
| exon-exon | ABR | 17 | - | NXN | 17 | - |
| exon-exon | TSR3 | | - | UBE2I | 16 | + |
| exon-exon | ATP6V1H | 8 | - | IVNS1ABP | 1 | - |
| exon-exon | ARFRP1 | 20 | - | TPRN | 9 | - |
| exon-exon | ANP32A | 15 | - | NCL | 2 | - |
| exon-exon | ABR | 17 | - | TPRN | 9 | - |
| exon-exon | VPS13B | 8 | + | LAPTM4B | 8 | + |
| exon-exon | STIP1 | | + | WDR74 | | - |
| exon-exon | RPLP1 | 15 | + | KIF23 | 15 | + |
| exon-exon | PTMS | 12 | + | NCL | 2 | - |
| exon-exon | PI4KA | 22 | - | UCHL5 | | - |
| exon-exon | PRPF39 | | + | CAPZA2 | 7 | + |
| exon-exon | PEX12 | 17 | - | OLFML2A | 9 | + |
| exon-exon | OTUB1 | 11 | + | COX8A | 11 | + |
| exon-exon | NF1 | 17 | + | TFDP1 | 13 | + |
| exon-exon | NDUFS1 | 2 | - | EEF1B2P3 | | - |
| exon-exon | EEF2 | 19 | - | PPIB | 15 | - |
| exon-exon | CHCHD3 | 7 | - | EXOC4 | 7 | + |
| exon-exon | ZNF670-ZNF695 | 1 | - | WDR64 | 1 | + |
| exon-exon | RARS1 | 5 | + | G3BP1 | 5 | + |
| exon-exon | FRMD5 | 15 | - | CKAP5 | 11 | - |
| exon-exon | PDE8A | 15 | + | SND1 | 7 | + |
| exon-exon | COQ6 | 14 | + | TBL1XR1 | 3 | - |
| exon-exon | CD109 | 6 | + | MTO1 | 6 | + |
| exon-exon | CNOT2 | 12 | + | PTMAP2 | 5 | + |
| exon-exon | BBS9 | | + | FKBP9 | 7 | + |
| exon-exon | NDUFB5 | 3 | + | ACTL6A | 3 | + |
| exon-exon | ARFRP1 | 20 | - | HSPA9 | 5 | - |
| exon-exon | EIF3A | 10 | - | SFXN4 | 10 | - |
| exon-exon | SYTL2 | | - | PICALM | 11 | - |
| exon-exon | PPIB | 15 | - | PPIA | 7 | + |
| exon-exon | MTA1 | 14 | + | PACS2 | 14 | + |
| exon-exon | EXOC4 | 7 | + | LRGUK | | + |
| exon-exon | OSBPL9 | 1 | + | C1orf185 | | + |
| exon-exon | GNL1 | 6 | - | FLOT1 | 6 | - |
| exon-exon | DYNC1H1 | 14 | + | PPP2R5C | 14 | + |
| exon-exon | DYM | 18 | - | DAZAP1 | 19 | + |
| exon-exon | DAZAP1 | 19 | + | DYM | 18 | - |
| exon-exon | ABHD12 | 20 | - | METTL25 | | + |
| exon-exon | PPP4R2 | 3 | + | NCL | 2 | - |
| exon-exon | MMP16 | 8 | - | EIF3EP1 | | + |
| exon-exon | ACTB | 7 | - | SQSTM1 | 5 | + |
| exon-exon | KPNB1 | 17 | + | NPEPPS | 17 | + |
| exon-exon | ABCC1 | 16 | + | MCRIP2 | 16 | + |
| exon-exon | WDR6 | 3 | + | MXI1 | 10 | + |
| exon-exon | GLUD1 | 10 | - | UTP6 | | - |
| exon-exon | RPL27 | 17 | + | BECN1 | 17 | - |
| exon-exon | IFRD1 | 7 | + | RPL13A | 19 | + |
| exon-exon | ETFA | 15 | - | HMG20A | 15 | + |
| exon-exon | CTSB | 8 | - | POLD1 | | + |
| exon-exon | CTNNBL1 | 20 | + | ANP32B | 9 | + |
| exon-exon | ATP9B | | + | ZNF516 | | - |
| exon-exon | DYNC1H1 | 14 | + | LTO1 | 11 | - |
| exon-exon | DENND4A | 15 | - | SYCP2 | 20 | - |
| exon-exon | LAMC2 | 1 | + | LAMC1 | 1 | + |
| exon-exon | THSD4 | 15 | + | SERHL2 | 22 | + |
| exon-exon | RPS6KC1 | | + | FLVCR1 | 1 | + |
| exon-exon | OBI1 | | - | AKAP11 | 13 | + |
| exon-exon | RCOR1 | | + | EVL | 14 | + |
| exon-exon | HSPA9 | 5 | - | TMCO6 | 5 | + |
| exon-exon | FUBP3 | 9 | + | SERAC1 | | - |
| exon-exon | BABAM2 | 2 | + | SNX17 | 2 | + |
| exon-exon | PAFAH1B2 | 11 | + | USP28 | | - |
| exon-exon | FBXO11 | 2 | - | MAP2K5 | 15 | + |
| exon-exon | ANXA7 | 10 | - | DNAH12 | 3 | - |
| exon-exon | SPRED2 | | - | RAB1A | 2 | - |
| exon-exon | NCL | 2 | - | PTMA | 2 | + |
| exon-exon | IQCE | | + | EIF3B | 7 | + |
| exon-exon | GPR107 | 9 | + | ANXA3 | | + |
| exon-exon | SH3TC2 | | - | IPO11 | 5 | + |
| exon-exon | ARPC1B | 7 | + | DHX30 | 3 | + |
| exon-exon | NFAT5 | 16 | + | WWP2 | 16 | + |
| exon-exon | RTRAF | 14 | + | SLC25A21 | 14 | - |
| exon-exon | ZSWIM4 | 19 | + | NDUFS4 | 5 | + |
| exon-exon | SOD2 | 6 | - | ANXA2 | 15 | - |
| exon-exon | SLIRP | 14 | + | EXD2 | 14 | + |
| exon-exon | RAD54B | 8 | - | IKZF3 | 17 | - |
| exon-exon | MLPH | | + | PRDM12 | | + |
| exon-exon | KRT7 | 12 | + | PNPLA6 | 19 | + |
| exon-exon | ANPEP | 15 | - | ARPIN-AP3S2 | 15 | - |
| exon-exon | TAF4 | 20 | - | PSMA7 | 20 | - |
| exon-exon | PTMS | 12 | + | VIRMA | | - |
| exon-exon | PCGF3 | 4 | + | SYVN1 | 11 | - |
| exon-exon | LONP2 | 16 | + | SIAH1 | 16 | - |
| exon-exon | DFFA | 1 | - | CENPS-CORT | 1 | + |
| exon-exon | BAX | 19 | + | NUCB1 | 19 | + |
| exon-exon | ASPA | | + | PMVK | 1 | - |
| exon-exon | ACOT9 | X | - | APOO | X | - |
| exon-exon | MED15 | 22 | + | PI4KA | 22 | - |
| exon-exon | UBN1 | | + | UBALD1 | | - |
| exon-exon | TTC39C | 18 | + | LAMA3 | 18 | + |
| exon-exon | STARD10 | 11 | - | FCHSD2 | 11 | - |
| exon-exon | SAMD8 | 10 | + | DUSP13 | | - |
| exon-exon | RAB11FIP4 | | + | NF1 | 17 | + |
| exon-exon | PLEKHG3 | | + | MTHFD1 | 14 | + |
| exon-exon | MYO9A | 15 | - | ZYG11B | 1 | + |
| exon-exon | KLHL35 | | - | GDPD5 | 11 | - |
| exon-exon | KCNN3 | | - | ASH1L | 1 | - |
| exon-exon | FAR2 | 12 | + | MKX | | - |
| exon-exon | CCDC6 | 10 | - | ANK3 | 10 | - |
| exon-exon | TAF4 | 20 | - | HHLA2 | | + |
| exon-exon | CACHD1 | 1 | + | ROR1 | 1 | + |
| exon-exon | POU5F1 | 6 | - | SARS1 | 1 | + |
| exon-exon | ELF3 | 1 | + | RPL39P3 | 6 | - |
| exon-exon | DGCR2 | 22 | - | CLTCL1 | 22 | - |
| exon-exon | CHCHD3 | 7 | - | HUWE1 | X | - |
| exon-exon | CCDC14 | 3 | - | PCM1 | 8 | + |
| exon-exon | AGK | | + | NDUFB2 | 7 | + |
| exon-exon | SREBF1 | 17 | - | TOM1L2 | 17 | - |
| exon-exon | RNF220 | 1 | + | QSOX1 | 1 | + |
| exon-exon | RPLP0 | 12 | - | CDK5 | | - |
| exon-exon | XIAP | | + | STAG2 | X | + |
| exon-exon | TPD52L1 | | + | PARVA | 11 | + |
| exon-exon | ASH1L | 1 | - | QSER1 | 11 | + |
| exon-exon | TTLL7 | | - | GNG5 | 1 | - |
| exon-exon | TNS3 | 7 | - | PKD1L1 | 7 | - |
| exon-exon | ST3GAL3 | 1 | + | SSBP3P2 | | - |
| exon-exon | SIK3 | 11 | - | PCSK7 | 11 | - |
| exon-exon | SPIDR | | + | ZFAT | 8 | - |
| exon-exon | PITPNA | 17 | - | SLC43A2 | 17 | - |
| exon-exon | FBRSL1 | 12 | + | STX2 | | - |
| exon-exon | CNTLN | 9 | + | RPS6 | 9 | - |
| exon-exon | CDK5RAP1 | 20 | - | TUT7 | 9 | - |
| exon-exon | ASAP1 | 8 | - | TAFA5 | | + |
| exon-exon | ARHGAP5 | 14 | + | AKAP6 | | + |
| exon-exon | ZNF592 | 15 | + | AUTS2 | 7 | + |
| exon-exon | ZSCAN25 | 7 | + | CUX1 | 7 | + |
| exon-exon | UQCC1 | 20 | - | RPN2 | 20 | + |
| exon-exon | UQCC1 | 20 | - | PHF20 | 20 | + |
| exon-exon | AFMID | 17 | + | SYNGR2 | 17 | + |
| exon-exon | NUP42 | 7 | + | SET | 9 | + |
| exon-exon | SNAPC3 | | + | ADAMTSL1 | 9 | + |
| exon-exon | SLC9A3R2 | | + | RAB1B | 11 | + |
| exon-exon | ICE1 | 5 | + | MARCHF11 | 5 | - |
| exon-exon | HEXD | | + | SLC16A3 | 17 | + |
| exon-exon | FAIM2 | 12 | - | PCNT | 21 | + |
| exon-exon | ASPH | 8 | - | EIF4EBP1 | | + |
| exon-exon | TEAD4 | 12 | + | ZNF207 | 17 | + |
| exon-exon | YIF1A | 11 | - | CNIH2 | 11 | + |
| exon-exon | RHOA | 3 | - | CCDC150 | 2 | + |
| exon-exon | RAB2A | 8 | + | ASPH | 8 | - |
| exon-exon | MTMR4 | 17 | - | SEPTIN4 | | - |
| exon-exon | CEP128 | 14 | - | GTF2A1 | 14 | - |
| exon-exon | CDC42BPB | 14 | - | SPAG5 | 17 | - |
| exon-exon | MIDEAS | 14 | - | NVL | 1 | - |
| exon-exon | TEAD4 | 12 | + | ERC1 | 12 | + |
| exon-exon | RPN2 | 20 | + | HIBADH | | - |
| exon-exon | PTPRK | 6 | - | NHSL1 | 6 | - |
| exon-exon | PLPP4 | | + | C10orf82 | | - |
| exon-exon | ERC1 | 12 | + | CACNA2D4 | 12 | - |
| exon-exon | HSF2 | | + | SERINC1 | 6 | - |
| exon-exon | RPS6KB1 | 17 | + | VMP1 | 17 | + |
| exon-exon | NEGR1 | 1 | - | SRSF11 | 1 | + |
| exon-exon | EEF1G | 11 | - | MYH9 | 22 | - |
| exon-exon | EEF1A1P11 | 1 | + | EXT1 | 8 | - |
| exon-exon | ZNF680 | 7 | - | SNAP91 | 6 | - |
| exon-exon | PIP5K1C | | - | NFIC | 19 | + |
| exon-exon | PARD3 | 10 | - | PLEKHA2 | 8 | + |
| exon-exon | KDM4C | 9 | + | PARD6G | | - |
| exon-exon | ISM1 | 20 | + | IPO7 | 11 | + |
| exon-exon | TMEM104 | 17 | + | NF1 | 17 | + |
| exon-exon | F3 | 1 | - | SPG7 | 16 | + |
| exon-exon | ESCO1 | 18 | - | ABHD3 | 18 | - |
| exon-exon | STRN3 | 14 | - | SCFD1 | 14 | + |
| exon-exon | PDE3A | 12 | + | SLCO1C1 | 12 | + |
| exon-exon | MKNK2 | 19 | - | AP3D1 | 19 | - |
| exon-exon | KIAA1958 | 9 | + | HSDL2 | 9 | + |
| exon-exon | CALR | 19 | + | AFP | | + |
| exon-exon | C16orf70 | 16 | + | CBFB | 16 | + |
| exon-exon | NUP42 | 7 | + | SUN1 | 7 | + |
| exon-exon | KLHL20 | | + | SRGAP2 | 1 | + |
| exon-exon | CUX1 | 7 | + | GINS3 | | + |
| exon-exon | ARHGAP5 | 14 | + | NUBPL | 14 | + |
| exon-exon | NUP188 | 9 | + | PHYHD1 | | + |
| exon-exon | IPO11 | 5 | + | KIAA0825 | 5 | - |
| exon-exon | GAREM1 | 18 | - | SDHAF3 | | + |
| exon-exon | ANKIB1 | 7 | + | PTPRN2 | 7 | - |
| exon-exon | ZNF608 | 5 | - | FAM172A | 5 | - |
| exon-exon | WNK1 | 12 | + | ERC1 | 12 | + |
| exon-exon | STAT1 | 2 | - | STAT4 | 2 | - |
| exon-exon | LMAN2 | 5 | - | PDLIM7 | 5 | - |
| exon-exon | ITGA3 | 17 | + | EMC9 | 14 | - |
| exon-exon | CEP120 | | - | PDE6A | | - |
| exon-exon | ZNF500 | 16 | - | SEPTIN12 | | - |
| exon-exon | TPM3 | 1 | - | C1orf43 | 1 | - |
| exon-exon | RACGAP1 | | - | AKAP6 | | + |
| exon-exon | G6PD | X | - | IKBKG | X | + |
| exon-exon | ATP6V1G2-DDX39B | 6 | - | EVC | 4 | + |
| exon-exon | CAPZA2 | | + | MET | 7 | + |
| exon-exon | ARHGAP26 | 5 | + | RNF130 | 5 | - |
| exon-exon | PALLD | 4 | + | VMP1 | 17 | + |
| exon-exon | MICAL2 | 11 | + | PARVA | 11 | + |
| exon-exon | CABIN1 | 22 | + | VSTM2A | | + |
| exon-exon | GALNT2 | 1 | + | C1orf198 | 1 | - |
| exon-exon | BICC1 | 10 | + | CISD1 | 10 | + |
| exon-exon | RNF115 | 1 | - | TRNAU1AP | 1 | + |
| exon-exon | SKIL | | + | MYOF | 10 | - |
| exon-exon | RNF213 | 17 | + | BAIAP2 | 17 | + |
| exon-exon | RBM6 | 3 | + | DOCK3 | | + |
| exon-exon | RAB8B | 15 | + | ANXA2 | 15 | - |
| exon-exon | NCAPG | | + | ENSA | 1 | - |
| exon-exon | MAML2 | 11 | - | CEP57 | 11 | + |
| exon-exon | LARP4 | 12 | + | TMBIM6 | 12 | + |
| exon-exon | FHOD3 | | + | SLC25A4 | 4 | + |
| exon-exon | CTNNA3 | 10 | - | LIPK | | + |
| exon-exon | TMEM123 | 11 | - | YAP1 | 11 | + |
| exon-exon | TES | 7 | + | CAV1 | 7 | + |
| exon-exon | RAC1 | 7 | + | MRPS7 | 17 | + |
| exon-exon | WDR43 | 2 | + | TRIM54 | 2 | + |
| exon-exon | CRKL | 22 | + | AP3D1 | 19 | - |
| exon-exon | AGAP1 | 2 | + | F3 | 1 | - |
| exon-exon | TP53 | 17 | - | DNAH2 | 17 | + |
| exon-exon | KMT2E | 7 | + | ALX4 | | - |
| exon-exon | LRCH1 | 13 | + | GTF2F2 | | + |
| exon-exon | DPYSL2 | 8 | + | RPL15P3 | 6 | + |
| exon-exon | ABHD15 | 17 | - | SSH2 | 17 | - |
| exon-exon | SMYD4 | 17 | - | RPA1 | 17 | + |
| exon-exon | SLC3A2 | 11 | + | VCP | 9 | - |
| exon-exon | MIER3 | | - | CDC20B | | - |
| exon-exon | PCDH7 | 4 | + | ZSWIM6 | 5 | + |
| exon-exon | HNRNPR | 1 | - | KDM1A | 1 | + |
| exon-exon | FLI1 | 11 | + | EWSR1 | 22 | + |
| exon-exon | EEF1G | 11 | - | UBXN1 | 11 | - |
| exon-exon | CCDC84 | 11 | + | FN1 | 2 | - |
| exon-exon | PTPRN2 | 7 | - | FGF3 | | - |
| exon-exon | PTK2 | 8 | - | TRAPPC9 | 8 | - |
| exon-exon | FAM160B2 | | + | TUSC3 | 8 | + |
| exon-exon | TSC2 | | + | SYNGR3 | | + |
| exon-exon | SRSF5 | 14 | + | HNRNPA2B1 | 7 | - |
| exon-exon | SREBF1 | 17 | - | PTPRF | 1 | + |
| exon-exon | SLC25A29 | 14 | - | STIP1 | 11 | + |
| exon-exon | VMP1 | 17 | + | CLTC | 17 | + |
| exon-exon | ARHGAP35 | 19 | + | VRK3 | 19 | - |
| exon-exon | SPAG9 | 17 | - | MBTD1 | 17 | - |
| exon-exon | PANK2 | | + | MAVS | 20 | + |
| exon-exon | GNPTAB | 12 | - | WASHC3 | 12 | - |
| exon-exon | COMMD10 | 5 | + | AP3S1 | 5 | + |
| exon-exon | USP8 | 15 | + | GALK2 | 15 | + |
| exon-exon | DOCK9 | 13 | - | STK24 | 13 | - |
| exon-exon | TRPC4AP | 20 | - | RPRD1B | 20 | + |
| exon-exon | MRPS28 | 8 | - | TPD52 | 8 | - |
| exon-exon | LDLRAD3 | 11 | + | IFTAP | | + |
| exon-exon | DTD1 | 20 | + | PET117 | | + |
| exon-exon | CTSD | 11 | - | NCLN | 19 | + |
| exon-exon | COG4 | 16 | - | VAC14 | 16 | - |
| exon-exon | TTLL5 | 14 | + | YLPM1 | 14 | + |
| exon-exon | RAB34 | 17 | - | NEK8 | 17 | + |
| exon-exon | PSMD5 | 9 | - | C5 | | - |
| exon-exon | DNAJC8 | 1 | - | ERBB2 | 17 | + |
| exon-exon | GPI | 19 | + | ZNF362 | 1 | + |
| exon-exon | GCAT | | + | GGA1 | 22 | + |
| exon-exon | CHMP4B | 20 | + | PIGU | 20 | - |
| exon-exon | CHMP4B | 20 | + | NCOA6 | 20 | - |
| exon-exon | AMBRA1 | 11 | - | ARHGAP1 | 11 | - |
| exon-exon | ZC3H3 | 8 | - | EEF1D | 8 | - |
| exon-exon | USP10 | 16 | + | COTL1 | 16 | - |
| exon-exon | TMEM123 | 11 | - | PICALM | 11 | - |
| exon-exon | TASP1 | 20 | - | PLCB1 | 20 | + |
| exon-exon | RBM14 | 11 | + | RBM4B | 11 | - |
| exon-exon | RPL11 | 1 | + | MYH9 | 22 | - |
| exon-exon | LUC7L3 | 17 | + | DEK | 6 | - |
| exon-exon | PDIA3 | 15 | + | PSMF1 | 20 | + |
| exon-exon | PA2G4 | 12 | + | PSMA7 | 20 | - |
| exon-exon | GRHPR | 9 | + | DVL2 | 17 | - |
| exon-exon | EIF4B | 12 | + | UPP1 | | + |
| exon-exon | C19orf25 | 19 | - | NDUFS7 | 19 | + |
| exon-exon | PTPRK | 6 | - | CHMP1A | 16 | - |
| exon-exon | TMEM123 | 11 | - | BIRC2 | | + |
| exon-exon | TEAD1 | 11 | + | ABCC8 | | - |
| exon-exon | EPHB2 | 1 | + | LYPLA2 | 1 | + |
| exon-exon | EHBP1L1 | 11 | + | FCHSD2 | 11 | - |
| exon-exon | DYNC2H1 | 11 | + | CNTN5 | 11 | + |
| exon-exon | CWF19L2 | 11 | - | JHY | 11 | + |
| exon-exon | MTPAP | 10 | - | ARHGAP21 | 10 | - |
| exon-exon | RPTOR | 17 | + | FLNA | X | - |
| exon-exon | RNF212 | | - | CTBP1 | 4 | - |
| exon-exon | GATC | | + | DCTD | 4 | - |
| exon-exon | GAS7 | 17 | - | ELAVL2 | | - |
| exon-exon | FXR2 | 17 | - | GAS7 | 17 | - |
| exon-exon | CNBP | 3 | - | EIF4H | 7 | + |
| exon-exon | ZNF791 | 19 | + | BCL2 | 18 | - |
| exon-exon | CRIM1 | 2 | + | FEZ2 | 2 | - |
| exon-exon | ZNF107 | 7 | + | ATP6V1G2-DDX39B | 6 | - |
| exon-exon | XRCC6 | 22 | + | POLR3H | 22 | - |
| exon-exon | SUPV3L1 | | + | PRKG1 | 10 | + |
| exon-exon | RBM17 | 10 | + | ZNF541 | 19 | - |
| exon-exon | LARP1 | 5 | + | ANKLE2 | 12 | - |
| exon-exon | KIF5A | 12 | + | CTDSP2 | 12 | - |
| exon-exon | DCTN2 | 12 | - | AVIL | 12 | - |
| exon-exon | COL3A1 | 2 | + | SMC4 | 3 | + |
| exon-exon | BCL2 | 18 | - | RMC1 | | + |
| exon-exon | BCAR3 | 1 | - | ABCA4 | 1 | - |
| exon-exon | TYW1 | 7 | + | C7orf50 | 7 | - |
| exon-exon | NXN | 17 | - | CA10 | | - |
| exon-exon | EML4 | 2 | + | MRPL35 | | + |
| exon-exon | EHBP1 | 2 | + | EML4 | 2 | + |
| exon-exon | CLASP1 | 2 | - | UPF2 | 10 | - |
| exon-exon | ARPC5 | 1 | - | FBXO9 | 6 | + |
| exon-exon | NPLOC4 | 17 | - | TBCD | 17 | + |
| exon-exon | CEP112 | 17 | - | TEX2 | 17 | - |
| exon-exon | ARHGAP12 | 10 | - | KIF5B | 10 | - |
| exon-exon | NFIX | 19 | + | GCDH | 19 | + |
| exon-exon | UBE2K | 4 | + | CCDC149 | 4 | - |
| exon-exon | RETSAT | 2 | - | HADHB | 2 | + |
| exon-exon | PPP1R12B | 1 | + | MPDU1 | 17 | + |
| exon-exon | MTA1 | 14 | + | DPF3 | | - |
| exon-exon | CRSP8P | | - | SYT3 | 19 | - |
| exon-exon | KIF1C | 17 | + | MYH10 | 17 | - |
| exon-exon | FXR2 | 17 | - | TP53 | 17 | - |
| exon-exon | FAP | 2 | - | IFIH1 | 2 | - |
| exon-exon | EDF1 | 9 | - | RABL6 | 9 | + |
| exon-exon | TCN2 | | + | TGFB1 | 19 | - |
| exon-exon | MYH9 | 22 | - | TXN2 | 22 | - |
| exon-exon | MYOF | 10 | - | RBP4 | 10 | - |
| exon-exon | BICRA | 19 | + | C5AR1 | 19 | + |
| exon-exon | APPBP2 | | - | RSBN1L | 7 | + |
| exon-exon | AP2A1 | 19 | + | TXNRD2 | 22 | - |
| exon-exon | UBE4B | 1 | + | KIF1B | 1 | + |
| exon-exon | TRNAU1AP | | + | PHACTR4 | 1 | + |
| exon-exon | SPAG9 | 17 | - | LRRC59 | 17 | - |
| exon-exon | SEPTIN2 | 2 | + | AGAP1 | 2 | + |
| exon-exon | RPS11 | 19 | + | ALDH16A1 | 19 | + |
| exon-exon | PPP1CB | 2 | + | PLB1 | 2 | + |
| exon-exon | ITGB6 | | - | RBMS1 | 2 | - |
| exon-exon | PPIE | 1 | + | UBR4 | 1 | - |
| exon-exon | KIRREL1 | 1 | + | CHD1L | 1 | + |
| exon-exon | ADAMTSL3 | | + | LYPLA1 | 8 | - |
| exon-exon | RBMS2 | 12 | + | TMBIM6 | 12 | + |
| exon-exon | CEP85 | | + | ADAMTS18 | | - |
| exon-exon | PLPP1 | 5 | - | ADCY2 | 5 | + |
| exon-exon | NFATC3 | 16 | + | EDC4 | 16 | + |
| exon-exon | FEM1B | 15 | + | KCNG3 | | - |
| exon-exon | MFSD6 | | + | INPP1 | 2 | + |
| exon-exon | ARHGAP10 | | + | NR3C2 | 4 | - |
| exon-exon | TFG | 3 | + | ZBTB11 | 3 | - |
| exon-exon | STRN3 | 14 | - | SCFD1 | 14 | + |
| exon-exon | GBE1 | 3 | - | MAGED2 | X | + |
| exon-exon | SLC35E3 | 12 | + | CACNA2D4 | 12 | - |
| exon-exon | SLC25A42 | | + | ARMC6 | 19 | + |
| exon-exon | SCAF4 | 21 | - | CLEC2D | 12 | + |
| exon-exon | PLIN3 | 19 | - | ARRDC5 | | - |
| exon-exon | PARVA | 11 | + | TEAD1 | 11 | + |
| exon-exon | NNT | 5 | + | GHR | 5 | + |
| exon-exon | MTMR6 | | - | KL | 13 | + |
| exon-exon | GSK3B | 3 | - | FOXP1 | 3 | - |
| exon-exon | EML4 | 2 | + | NTRK3 | 15 | - |
| exon-exon | CSMD2 | | - | PHC2 | 1 | - |
| exon-exon | CRKL | 22 | + | SNAP29 | 22 | + |
| exon-exon | CCND2 | 12 | + | AKAP3 | 12 | - |
| exon-exon | ARMC9 | 2 | + | PSMD1 | 2 | + |
| exon-exon | TVP23B | 17 | + | MAP2K3 | 17 | + |
| exon-exon | HSF1 | 8 | + | BOP1 | | - |
| exon-exon | SMG5 | 1 | - | CCT3 | 1 | - |
| exon-exon | ACACB | 12 | + | FBXO21 | 12 | - |
| exon-exon | TRAPPC9 | 8 | - | COL22A1 | | - |
| exon-exon | OGFOD1 | 16 | + | RPS18 | 6 | + |
| exon-exon | MTAP | 9 | + | BNC2 | 9 | - |
| exon-exon | LYRM4 | | - | PSIP1 | | - |
| exon-exon | MROH1 | 8 | + | PARP10 | 8 | - |
| exon-exon | ELL2 | 5 | - | TRIP12 | 2 | - |
| exon-exon | DNER | | - | ELL2 | 5 | - |
| exon-exon | NFIC | 19 | + | CELF5 | 19 | + |
| exon-exon | ERBB2 | 17 | + | MAD2L2 | 1 | - |
| exon-exon | CLIP4 | 2 | + | EPHB4 | 7 | - |
| exon-exon | YY1 | 14 | + | WDR25 | 14 | + |
| exon-exon | PICALM | 11 | - | MLLT10 | 10 | + |
| exon-exon | NCAPG2 | 7 | - | ESYT2 | 7 | - |
| exon-exon | HAT1 | 2 | + | TRMT11 | | + |
| exon-exon | BSG | 19 | + | PGAP6 | 16 | - |
| exon-exon | VEGFA | 6 | + | KIF6 | 6 | - |
| exon-exon | SIM2 | 21 | + | RIPPLY3 | 21 | + |
| exon-exon | MEGF6 | 1 | - | PLCH2 | 1 | + |
| exon-exon | GCA | 2 | + | DYNLT1 | 6 | - |
| exon-exon | STK17A | 7 | + | GET4 | 7 | + |
| exon-exon | RPS6KB1 | 17 | + | VMP1 | 17 | + |
| exon-exon | KLHL18 | 3 | + | PSMA5 | | - |
| exon-exon | HSP90B1 | 12 | + | PTMS | 12 | + |
| exon-exon | DLG2 | 11 | - | PICALM | 11 | - |
| exon-exon | MCUB | | + | TUBA1A | 12 | - |
| exon-exon | ACADS | | + | ABCC3 | 17 | + |
| exon-exon | CCDC91 | 12 | + | CRTC3 | 15 | + |
| exon-exon | CHKA | 11 | - | CASC3 | 17 | + |
| exon-exon | SRGN | 10 | + | SGPL1 | 10 | + |
| exon-exon | PDCD11 | 10 | + | ATIC | 2 | + |
| exon-exon | PARD6B | | + | DIAPH3 | 13 | - |
| exon-exon | ITPR2 | 12 | - | CCDC91 | 12 | + |
| exon-exon | ECH1 | 19 | - | EIF3K | 19 | + |
| exon-exon | ADAP1 | 7 | - | SUN1 | 7 | + |
| exon-exon | ZEB1 | 10 | + | WAC | 10 | + |
| exon-exon | HIPK3 | | + | ADPGK | 15 | - |
| exon-exon | CDK6 | 7 | - | SLC25A25 | 9 | + |
| exon-exon | TMEM38A | 19 | + | CSNK1D | 17 | - |
| exon-exon | CCDC6 | 10 | - | ANK3 | 10 | - |
| exon-exon | RBMS2 | 12 | + | SARNP | 12 | - |
| exon-exon | NR3C1 | 5 | - | ARHGAP26 | 5 | + |
| exon-exon | DDX60L | | - | PLRG1 | 4 | - |
| exon-exon | SHLD1 | 20 | + | ANXA2 | 15 | - |
| exon-exon | ANP32B | 9 | + | CLIP4 | 2 | + |
| exon-exon | RAB31 | 18 | + | VAPA | 18 | + |
| exon-exon | RAB1A | 2 | - | MFF | 2 | + |
| exon-exon | PSMB7 | 9 | - | PTBP3 | 9 | - |
| exon-exon | OGG1 | 3 | + | SLC38A2 | 12 | - |
| exon-exon | MRRF | 9 | + | MORN5 | 9 | + |
| exon-exon | BAIAP2 | 17 | + | PSMD12 | 17 | - |
| exon-exon | KCTD3 | 1 | + | TACC3 | 4 | + |
| exon-exon | ENOSF1 | 18 | - | RAB1A | 2 | - |
| exon-exon | ZNF7 | | + | HGS | 17 | + |
| exon-exon | TXNIP | 1 | - | KLHL17 | 1 | + |
| exon-exon | TPD52L2 | | + | ZGPAT | 20 | + |
| exon-exon | PPIB | 15 | - | NCAPD3 | 11 | - |
| exon-exon | EEA1 | 12 | - | UBE2N | 12 | - |
| exon-exon | FOCAD | 9 | + | IFT74 | 9 | + |
| exon-exon | ANO7 | 2 | + | ZDHHC8 | | + |
| exon-exon | MELK | | + | ZCCHC7 | 9 | + |
| exon-exon | KAT6B | 10 | + | DDX50 | 10 | + |
| exon-exon | DESI2 | 1 | + | CAPZB | 1 | - |
| exon-exon | MAPK15 | | + | SCRIB | 8 | - |
| exon-exon | SREK1 | 5 | + | HOMER1 | | - |
| exon-exon | SLC2A1 | 1 | - | CAPZB | 1 | - |
| exon-exon | RPL8 | 8 | - | UQCRC2 | 16 | + |
| exon-exon | PUM1 | 1 | - | SFPQ | 1 | - |
| exon-exon | PLCH2 | 1 | + | KHDRBS1 | 1 | + |
| exon-exon | PAQR3 | 4 | - | CD46 | 1 | + |
| exon-exon | KMT2A | 11 | + | MLLT3 | 9 | - |
| exon-exon | NUDC | 1 | + | PEF1 | 1 | - |
| exon-exon | HOMER1 | 5 | - | SREK1 | 5 | + |
| exon-exon | EXOSC10 | 1 | - | KPNA6 | 1 | + |
| exon-exon | CSMD2 | | - | USP48 | 1 | - |
| exon-exon | AFG3L2 | 18 | - | SPIRE1 | 18 | - |
| exon-exon | VIM | 10 | + | KRT7 | 12 | + |
| exon-exon | ZNF597 | 16 | - | C16orf90 | | - |
| exon-exon | ZDHHC5 | | + | EPB41L5 | 2 | + |
| exon-exon | TRA2A | 7 | - | CBX3 | 7 | + |
| exon-exon | RABGGTB | 1 | + | GDI2 | 10 | - |
| exon-exon | NR3C1 | 5 | - | RBM22 | | - |
| exon-exon | PER3 | 1 | + | CAMTA1 | 1 | + |
| exon-exon | P2RX4 | | + | P2RX7 | 12 | + |
| exon-exon | TMEM131L | 4 | + | COX17 | 3 | - |
| exon-exon | HNRNPA2B1 | 7 | - | CDC5L | 6 | + |
| exon-exon | F3 | 1 | - | C11orf80 | 11 | + |
| exon-exon | EXOSC1 | 10 | - | CRTAC1 | | - |
| exon-exon | ELP4 | 11 | + | DNAJC24 | 11 | + |
| exon-exon | CISD2 | 4 | + | UBE2D3 | 4 | - |
| exon-exon | ADAM17 | 2 | - | YWHAQ | 2 | - |
| exon-exon | ADAM17 | 2 | - | WWTR1 | 3 | - |
| exon-exon | CUX1 | 7 | + | ACHE | | - |
| exon-exon | TUBB | 6 | + | ABCF1 | 6 | + |
| exon-exon | RUFY3 | 4 | + | TMPRSS11A | 4 | - |
| exon-exon | PDXK | 21 | + | SYNJ1 | 21 | - |
| exon-exon | NINL | | - | PGAM5 | 12 | + |
| exon-exon | COMMD10 | 5 | + | AP3S1 | 5 | + |
| exon-exon | ANKS1B | 12 | - | ASAP1 | 8 | - |
| exon-exon | SLC35C2 | | - | DSN1 | | - |
| exon-exon | ABR | 17 | - | GLOD4 | 17 | - |
| exon-exon | PHTF1 | 1 | - | TTLL7 | 1 | - |
| exon-exon | NCOA7 | 6 | + | NKAIN2 | 6 | + |
| exon-exon | ABCC4 | 13 | - | DZIP1 | 13 | - |
| exon-exon | UNC13B | 9 | + | ENHO | 9 | - |
| exon-exon | UBR5 | 8 | - | SLC25A32 | 8 | - |
| exon-exon | TRPM4 | | + | SERINC2 | 1 | + |
| exon-exon | RPSA | 3 | + | ULK4 | 3 | - |
| exon-exon | PPP1R12C | 19 | - | TLE3 | 15 | - |
| exon-exon | ZNF207 | 17 | + | SSU72 | 1 | - |
| exon-exon | ITGA9 | 3 | + | CTDSPL | 3 | + |
| exon-exon | CRLS1 | 20 | + | TRAPPC6A | 19 | - |
| exon-exon | COX17 | 3 | - | SLC5A6 | 2 | - |
| exon-exon | CAMTA1 | 1 | + | USP39 | 2 | + |
| exon-exon | BRWD1 | 21 | - | AHR | 7 | + |
| exon-exon | ARID1A | 1 | + | MAST2 | 1 | + |
| exon-exon | VPS53 | 17 | - | YWHAE | 17 | - |
| exon-exon | USP34 | 2 | - | BCAT2 | 19 | - |
| exon-exon | UBAP2L | 1 | + | MAD1L1 | 7 | - |
| exon-exon | UBAP1 | 9 | + | PPP2R5A | 1 | + |
| exon-exon | ZFPM1 | 16 | + | SLC7A5 | 16 | - |
| exon-exon | TSPAN17 | | + | WDR54 | 2 | + |
| exon-exon | TRPS1 | 8 | - | SPTBN1 | 2 | + |
| exon-exon | TMEM104 | 17 | + | CDK12 | 17 | + |
| exon-exon | SNED1 | 2 | + | MLPH | 2 | + |
| exon-exon | SLC2A10 | 20 | + | ZMYND8 | 20 | - |
| exon-exon | RNF213 | 17 | + | PRPF38B | 1 | + |
| exon-exon | RANBP3 | 19 | - | LTA4H | 12 | - |
| exon-exon | RAB22A | 20 | + | PHACTR3 | 20 | + |
| exon-exon | NCL | 2 | - | EIF5B | 2 | + |
| exon-exon | LRP6 | 12 | - | STYK1 | | - |
| exon-exon | TTYH3 | 7 | + | MAD1L1 | 7 | - |
| exon-exon | LRBA | 4 | - | CHMP1A | 16 | - |
| exon-exon | INTS1 | 7 | - | TBRG4 | 7 | - |
| exon-exon | DDX42 | 17 | + | PITPNC1 | 17 | + |
| exon-exon | CMTM4 | 16 | - | AKR1C4 | 10 | + |
| exon-exon | CDYL | 6 | + | CDKAL1 | 6 | + |
| exon-exon | CDH1 | 16 | + | GRTP1 | 13 | - |
| exon-exon | ACTR2 | 2 | + | NFE2L2 | 2 | - |
| exon-exon | ZFP36L2 | 2 | - | LRRC6 | | - |
| exon-exon | TRNT1 | | + | CNTN4 | 3 | + |
| exon-exon | TPCN2 | 11 | + | RSF1 | 11 | - |
| exon-exon | TTYH3 | 7 | + | C7orf50 | 7 | - |
| exon-exon | ST8SIA6 | 10 | - | TAF15 | 17 | + |
| exon-exon | RAC1P2 | | - | AKT3 | 1 | - |
| exon-exon | MRPL48 | | + | GAB2 | 11 | - |
| exon-exon | GPATCH8 | 17 | - | SESN1 | 6 | - |
| exon-exon | GOLGA4 | 3 | + | TMEM87A | 15 | - |
| exon-exon | GLUD2 | X | + | VPS26A | 10 | + |
| exon-exon | FBXW2 | 9 | - | LOC112694756 | 16 | + |
| exon-exon | ATP8A1 | 4 | - | PSMB1 | 6 | - |
| exon-exon | PSAP | 10 | - | PTOV1 | 19 | + |
| exon-exon | NOVA1 | 14 | - | FUS | 16 | + |
| exon-exon | MMP16 | 8 | - | ANKRD13A | 12 | + |
| exon-exon | EFR3A | | + | ANK1 | 8 | - |
| exon-exon | ZZZ3 | 1 | - | ARF4 | 3 | - |
| exon-exon | WDFY3 | 4 | - | FRAS1 | | + |
| exon-exon | CFAP70 | 10 | - | MCU | 10 | + |
| exon-exon | SPOP | 17 | - | SNF8 | 17 | - |
| exon-exon | QKI | 6 | + | PACRG | 6 | + |
| exon-exon | PITPNC1 | 17 | + | EYA2 | 20 | + |
| exon-exon | SHLD2 | 10 | + | TBC1D12 | 10 | + |
| exon-exon | CNOT6L | 4 | - | FRAS1 | | + |
| exon-exon | ARHGAP10 | | + | CCDC30 | | + |
| exon-exon | UBR2 | | + | C9orf64 | | - |
| exon-exon | TOPORS | 9 | - | NDUFB6 | 9 | - |
| exon-exon | TBC1D17 | 19 | + | MED25 | 19 | + |
| exon-exon | SRSF11 | 1 | + | TXNRD1 | 12 | + |
| exon-exon | PDXDC1 | 16 | + | UBE2I | 16 | + |
| exon-exon | MKNK2 | 19 | - | GNG7 | 19 | - |
| exon-exon | MAP4K3 | 2 | - | WDPCP | 2 | - |
| exon-exon | LIMCH1 | 4 | + | SGPP1 | 14 | - |
| exon-exon | FAM219A | 9 | - | RNGTT | 6 | - |
| exon-exon | AJUBA | | - | BAZ1A | 14 | - |
| exon-exon | TRAPPC9 | 8 | - | AGO2 | 8 | - |
| exon-exon | SS18 | 18 | - | TESMIN | | - |
| exon-exon | HSP90AA1 | 14 | - | DYNC1H1 | 14 | + |
| exon-exon | EIF4BP7 | | - | DIPK2A | 3 | + |
| exon-exon | CLIP2 | 7 | + | RFC2 | 7 | - |
| exon-exon | MAD1L1 | 7 | - | TTYH3 | 7 | + |
| exon-exon | AUTS2 | 7 | + | ANTXR1 | 2 | + |
| exon-exon | AP3D1 | 19 | - | PTMS | 12 | + |
| exon-exon | ADAMTSL1 | 9 | + | CDKN2A | 9 | - |
| exon-exon | PLA2R1 | 2 | - | CRK | 17 | - |
| exon-exon | NCAPD2 | 12 | + | MRPL51 | 12 | - |
| exon-exon | SPOUT1 | 9 | - | ATL2 | | - |
| exon-exon | AP1S2 | X | - | PPP4R3B | 2 | - |
| exon-exon | TAF8 | 6 | + | ZMYND8 | 20 | - |
| exon-exon | PTPRO | | + | NBAS | 2 | - |
| exon-exon | HARS2 | 5 | + | DDX1 | 2 | + |
| exon-exon | EDF1 | 9 | - | RABL6 | 9 | + |
| exon-exon | EDC4 | 16 | + | PRPF6 | 20 | + |
| exon-exon | DEK | 6 | - | EIF5B | 2 | + |
| exon-exon | CRLS1 | 20 | + | PSMF1 | 20 | + |
| exon-exon | ZGPAT | 20 | + | RTEL1-TNFRSF6B | 20 | + |
| exon-exon | TXNRD1 | 12 | + | CHST11 | 12 | + |
| exon-exon | RAD50 | 5 | + | YTHDC2 | 5 | + |
| exon-exon | QPCTL | | + | PSIP1 | | - |
| exon-exon | LARP4B | 10 | - | TSPAN33 | | + |
| exon-exon | HMGA2 | 12 | + | CHMP1A | 16 | - |
| exon-exon | C7orf50 | 7 | - | TTYH3 | 7 | + |
| exon-exon | DEF6 | | + | ZP3 | 7 | + |
| exon-exon | HM13 | 20 | + | ASXL1 | 20 | + |
| exon-exon | HERC6 | 4 | + | LRBA | 4 | - |
| exon-exon | EPB41L2 | 6 | - | SON | 21 | + |
| exon-exon | F3 | 1 | - | SQSTM1 | 5 | + |
| exon-exon | NRDE2 | 14 | - | GGA3 | 17 | - |
| exon-exon | NUSAP1 | 15 | + | RRNAD1 | 1 | + |
| exon-exon | LDLR | 19 | + | BRK1 | 3 | + |
| exon-exon | C7orf50 | 7 | - | MAD1L1 | 7 | - |
| exon-exon | IFNGR2 | | + | IFNAR1 | 21 | + |
| exon-exon | CNTN1 | 12 | + | SBNO1 | 12 | - |
| exon-exon | APP | 21 | - | CCDC91 | 12 | + |
| exon-exon | SLC2A11 | 22 | + | SNAP29 | 22 | + |
| exon-exon | RCOR1 | | + | PPM1E | 17 | + |
| exon-exon | MED15 | 22 | + | TXNRD2 | 22 | - |
| exon-exon | DDX27 | 20 | + | EIF6 | 20 | - |
| exon-exon | ARHGAP26 | 5 | + | HSPA9 | 5 | - |
| exon-exon | VMP1 | 17 | + | CLTC | 17 | + |
| exon-exon | UBA2 | 19 | + | GPI | 19 | + |
| exon-exon | PXN | 12 | - | MSI1 | | - |
| exon-exon | HSPA12B | | + | NETO2 | 16 | - |
| exon-exon | ERBB4 | 2 | - | IKZF2 | 2 | - |
| exon-exon | ERBB4 | 2 | - | FUS | 16 | + |
| exon-exon | CTNNA3 | 10 | - | HECTD2 | 10 | + |
| exon-exon | COL11A1 | | - | PANK2 | 20 | + |
| exon-exon | COL11A1 | | - | IVNS1ABP | 1 | - |
| exon-exon | CLASRP | 19 | + | CLPTM1 | 19 | + |
| exon-exon | SMARCC1 | | - | PACS2 | 14 | + |
| exon-exon | ATP2B4 | 1 | + | ASRGL1 | 11 | + |
| exon-exon | TSPAN5 | | - | EIF4E | 4 | - |
| exon-exon | SUPV3L1 | | + | VPS26A | 10 | + |
| exon-exon | PLCB4 | | + | PLCB1 | 20 | + |
| exon-exon | PEX14 | 1 | + | PGD | 1 | + |
| exon-exon | LOC401957 | | + | KDM3B | 5 | + |
| exon-exon | ILF3 | 19 | + | TOP2A | 17 | - |
| exon-exon | HSPA9 | 5 | - | RMND5B | 5 | + |
| exon-exon | DOK6 | | + | CCDC102B | | + |
| exon-exon | PLPBP | 8 | + | NSD3 | 8 | - |
| exon-exon | UBAP1 | 9 | + | SEPTIN9 | 17 | + |
| exon-exon | TSPAN14 | 10 | + | TMEM254 | | + |
| exon-exon | SPC25 | 2 | - | DHRS9 | | + |
| exon-exon | NCL | 2 | - | MAP4K4 | 2 | + |
| exon-exon | MEAF6 | | - | SCMH1 | 1 | - |
| exon-exon | EIF2AK2 | 2 | - | SULT6B1 | | - |
| exon-exon | GALK2 | 15 | + | FAM214A | 15 | - |
| exon-exon | PPP2R1B | | - | TERT | | - |
| exon-exon | MPO | 17 | - | RPLP1 | 15 | + |
| exon-exon | RPS6KB1 | 17 | + | VMP1 | 17 | + |
| exon-exon | TRMT61B | 2 | - | ALK | 2 | - |
| exon-exon | SND1 | 7 | + | CFTR | 7 | + |
| exon-exon | PTCH1 | 9 | - | LUC7L2 | 7 | + |
| exon-exon | MLEC | 12 | + | FAM107B | 10 | - |
| exon-exon | MICALL2 | | - | KIF22 | 16 | + |
| exon-exon | GPD2 | 2 | + | RPS27A | 2 | + |
| exon-exon | TBC1D17 | 19 | + | PPP6R1 | | - |
| exon-exon | RBM28 | | - | ACOT7 | 1 | - |
| exon-exon | SND1 | 7 | + | KRT18 | 12 | + |
| exon-exon | NSRP1 | 17 | + | ATP5PB | 1 | + |
| exon-exon | CNIH2 | | + | PACS1 | 11 | + |
| exon-exon | CDCA8 | 1 | + | GRIK3 | | - |
| exon-exon | CBX1 | 17 | - | SSRP1 | 11 | - |
| exon-exon | UBQLN1 | 9 | - | SHC3 | 9 | - |
| exon-exon | SLC35B1 | | - | TGIF1 | 18 | + |
| exon-exon | SLC35B1 | | - | SLC12A7 | | - |
| exon-exon | SLC35B1 | | - | PMEPA1 | | - |
| exon-exon | SLC35B1 | | - | PDGFRA | 4 | + |
| exon-exon | SLC35B1 | | - | HNRNPUL1 | 19 | + |
| exon-exon | SACM1L | 3 | + | TAFA1 | 3 | + |
| exon-exon | PAXIP1 | 7 | - | DPP6 | 7 | + |
| exon-exon | LRRC1 | | + | CA10 | | - |
| exon-exon | AP3D1 | 19 | - | R3HCC1L | 10 | + |
| exon-exon | CFH | 1 | + | GPC6 | 13 | + |
| exon-exon | CDC40 | 6 | + | METTL24 | 6 | - |
| exon-exon | C1orf21 | 1 | + | ODR4 | 1 | + |
| exon-exon | ZNF595 | 4 | + | PIGG | 4 | + |
| exon-exon | SLC9A7 | | - | OGT | X | + |
| exon-exon | POLR1A | 2 | - | CCT3 | 1 | - |
| exon-exon | BABAM1 | 19 | + | ACTN1 | 14 | - |
| exon-exon | MANBA | 4 | - | UBE2D3 | 4 | - |
| exon-exon | EIF3E | 8 | - | PDS5A | 4 | - |
| exon-exon | PPP1R12A | 12 | - | PAWR | 12 | - |
| exon-exon | IPO7 | 11 | + | MYH9 | 22 | - |
| exon-exon | EHBP1 | 2 | + | UGP2 | 2 | + |
| exon-exon | CPVL | | - | JAZF1 | 7 | - |
| exon-exon | CIZ1 | 9 | - | SPTAN1 | 9 | + |
| exon-exon | ATP9A | 20 | - | UQCC1 | 20 | - |
| exon-exon | GOSR1 | 17 | + | CPD | 17 | + |
| exon-exon | ARMC9 | 2 | + | PSMD1 | 2 | + |
| exon-exon | CCT3 | 1 | - | C1orf61 | 1 | - |
| exon-exon | ZSWIM4 | 19 | + | RFX1 | 19 | - |
| exon-exon | TBK1 | | + | OS9 | 12 | + |
| exon-exon | ICAM5 | | + | ANO8 | | - |
| exon-exon | ERI1 | 8 | + | SCNN1B | | + |
| exon-exon | CANX | 5 | + | PTMS | 12 | + |
| exon-exon | SNRNP200 | 2 | - | MPHOSPH8 | 13 | + |
| exon-exon | KDM4B | 19 | + | FST | 5 | + |
| exon-exon | ABHD12 | 20 | - | PYGB | 20 | + |
| exon-exon | SLC25A16 | | - | ZFAND3 | 6 | + |
| exon-exon | PLXNB2 | 22 | - | CIP2A | 3 | - |
| exon-exon | PIH1D1 | | - | CD44 | 11 | + |
| exon-exon | LARGE1 | 22 | - | XPNPEP3 | 22 | + |
| exon-exon | SLIRP | 14 | + | NGLY1 | 3 | - |
| exon-exon | NCOA1 | 2 | + | SPTBN1 | 2 | + |
| exon-exon | PATJ | 1 | + | DNAJC6 | 1 | + |
| exon-exon | FNIP1 | 5 | - | RAPGEF6 | 5 | - |
| exon-exon | NIBAN2 | 9 | - | CTSD | 11 | - |
| exon-exon | NDUFA12 | 12 | - | FGD6 | 12 | - |
| exon-exon | SORT1 | 1 | - | SPAG17 | 1 | - |
| exon-exon | SCAMP2 | 15 | - | WDR72 | | - |
| exon-exon | ALDH1A1 | 9 | - | YBX1P1 | 14 | - |
| exon-exon | PRKD3 | | - | QPCT | 2 | + |
| exon-exon | EIF2AK2 | 2 | - | PRKD3 | 2 | - |
| exon-exon | FCHSD2 | 11 | - | CARNS1 | | + |
| exon-exon | PTPRF | 1 | + | B4GALT2 | 1 | + |
| exon-exon | ITPK1 | 14 | - | ISM2 | | - |
| exon-exon | ANKLE2 | 12 | - | NOC4L | 12 | + |
| exon-exon | XPO1 | 2 | - | CCT4 | 2 | - |
| exon-exon | CXXC1 | 18 | - | MYO5B | 18 | - |
| exon-exon | BCL2 | 18 | - | VPS4B | 18 | - |
| exon-exon | CTSA | 20 | + | SUZ12 | 17 | + |
| exon-exon | IGLL5 | 22 | + | EEF1D | 8 | - |
| exon-exon | CLIP1 | 12 | - | RILPL2 | 12 | - |
| exon-exon | WWC2 | 4 | + | TENM3 | 4 | + |
| exon-exon | TMEM179B | 11 | + | TAF6L | 11 | + |
| exon-exon | SENP3-EIF4A1 | 17 | + | DNAH2 | 17 | + |
| exon-exon | POLQ | | - | DEFB136 | | - |
| exon-exon | FAM13A | 4 | - | CRLF3 | 17 | - |
| exon-exon | SENP6 | 6 | + | PDK1 | 2 | + |
| exon-exon | TYR | | + | SLMAP | 3 | + |
| exon-exon | OS9 | 12 | + | NELFB | 9 | + |
| exon-exon | RNF170 | | - | FNTA | | + |
| exon-exon | MTDH | 8 | + | HMGB2 | 4 | - |
| exon-exon | EIF3B | 7 | + | PIP4P2 | | - |
| exon-exon | BCL7C | 16 | - | LMF1 | 16 | - |
| exon-exon | B2M | 15 | + | JADE1 | 4 | + |
| exon-exon | ARID2 | 12 | + | YAF2 | 12 | - |
| exon-exon | ELAVL4 | | + | FAF1 | 1 | - |
| exon-exon | ARHGEF12 | 11 | + | HDAC9 | 7 | + |
| exon-exon | IGLL5 | 22 | + | DAZAP1 | 19 | + |
| exon-exon | TYR | | + | PICALM | 11 | - |
| exon-exon | EEFSEC | | + | RPS27A | 2 | + |
| exon-exon | RPL27A | 11 | + | MAN2A1 | 5 | + |
| exon-exon | TANGO6 | 16 | + | DUS2 | 16 | + |
| exon-exon | JAKMIP3 | | + | INPP5A | 10 | + |
| exon-exon | HK2 | 2 | + | TET3 | 2 | + |
| exon-exon | CDC27 | 17 | - | GPHN | 14 | + |
| exon-exon | KIF20B | | + | GBE1 | 3 | - |
| exon-exon | GBE1 | 3 | - | KIF20B | 10 | + |
| exon-exon | COL4A3 | | + | FBXO36 | 2 | + |
| exon-exon | KMT5A | 12 | + | CDK2AP1 | 12 | - |
| exon-exon | CAND1 | 12 | + | ACSS3 | 12 | + |
| exon-exon | TRIM52 | 5 | - | ZNF596 | 8 | + |
| exon-exon | SLK | 10 | + | DNAH5 | | - |
| exon-exon | MTMR3 | 22 | + | HIRA | 22 | - |
| exon-exon | HIRA | 22 | - | MTMR3 | 22 | + |
| exon-exon | CEP128 | 14 | - | GTF2A1 | 14 | - |
| exon-exon | ANKS1A | 6 | + | SLC7A8 | 14 | - |
| exon-exon | EFTUD2 | 17 | - | MAP3K14 | | - |
| exon-exon | CDC6 | 17 | + | RAPGEFL1 | 17 | + |
| exon-exon | RCN2 | 15 | + | CDKN1A | 6 | + |
| exon-exon | RNF41 | | - | LARP4 | 12 | + |
| exon-exon | CNPY2 | 12 | - | RPLP0 | 12 | - |
| exon-exon | RPS6KC1 | | + | KCNH1 | 1 | - |
| exon-exon | EEF2 | 19 | - | RAB1B | 11 | + |
| exon-exon | COA8 | 14 | + | MARK3 | 14 | + |
| exon-exon | ALG9 | 11 | - | SIK2 | 11 | + |
| exon-exon | GRID1 | 10 | - | WAPL | 10 | - |
| exon-exon | GAPDH | 12 | + | BUB1 | 2 | - |
| exon-exon | PRRC2B | 9 | + | HTR3C | | + |
| exon-exon | LDLRAD3 | 11 | + | CD44 | 11 | + |
| exon-exon | POLE2 | | - | CYB5R4 | 6 | + |
| exon-exon | UBE2Q1 | 1 | - | VPS72 | 1 | - |
| exon-exon | FSTL5 | 4 | - | MRPL21 | 11 | - |
| exon-exon | C1orf43 | 1 | - | SCAMP3 | 1 | - |
| exon-exon | RABGEF1 | 7 | + | NQO2 | 6 | + |
| exon-exon | LASP1 | 17 | + | PPP1R1B | | + |
| exon-exon | ZBTB8OS | 1 | - | YARS1 | 1 | - |
| exon-exon | MRPS35 | 12 | + | STK38L | 12 | + |
| exon-exon | CUX1 | 7 | + | CDC42 | 1 | + |
| exon-exon | USP34 | 2 | - | CCT4 | 2 | - |
| exon-exon | SIL1 | | - | CTNNA1 | 5 | + |
| exon-exon | GPC6 | 13 | + | GCHFR | 15 | + |
| exon-exon | LAMC1 | 1 | + | GNAI3 | 1 | + |
| exon-exon | SND1 | 7 | + | USP25 | 21 | + |
| exon-exon | PTPRA | 20 | + | BPIFA2 | 20 | + |
| exon-exon | TESK2 | | - | MAN1C1 | 1 | + |
| exon-exon | RIF1 | 2 | + | LYPD6 | | + |
| exon-exon | OSBPL1A | 18 | - | RPS18 | 6 | + |
| exon-exon | PIEZO1 | 16 | - | APRT | 16 | - |
| exon-exon | MAP4 | 3 | - | SMARCC1 | 3 | - |
| exon-exon | MAST2 | 1 | + | AKR1A1 | | + |
| exon-exon | BACE2 | 21 | + | DPY19L1 | 7 | - |
| exon-exon | TMCO3 | 13 | + | RBM14 | 11 | + |
| exon-exon | TADA2A | | + | DMD | X | - |
| exon-exon | RHPN2 | 19 | - | CPNE8 | 12 | - |
| exon-exon | PAK4 | 19 | + | LEUTX | | + |
| exon-exon | PCMTD2 | 20 | + | PRPF6 | 20 | + |
| exon-exon | TNPO2 | 19 | - | RFX1 | 19 | - |
| exon-exon | INVS | 9 | + | TGFBR1 | 9 | + |
| exon-exon | CSTF3 | | - | EIF3M | 11 | + |
| exon-exon | RAP1GDS1 | | + | KLF5 | 13 | + |
| exon-exon | EEF1A1P6 | 7 | - | DDX49 | 19 | + |
| exon-exon | TXNRD1 | 12 | + | NPM1 | 5 | + |
| exon-exon | SNIP1 | 1 | - | DNALI1 | | + |
| exon-exon | PTPRG | 3 | + | ZNF546 | | + |
| exon-exon | GLRB | | + | LRBA | 4 | - |
| exon-exon | SLC20A1 | 2 | + | POLR1B | 2 | + |
| exon-exon | MAT2B | 5 | + | HMMR | 5 | + |
| exon-exon | CRIM1 | 2 | + | IQCA1 | | - |
| exon-exon | KCNN4 | | - | GYS1 | 19 | - |
| exon-exon | MTREX | 5 | + | IVNS1ABP | 1 | - |
| exon-exon | ACYP2 | | + | MAGED2 | X | + |
| exon-exon | CLTC | 17 | + | RPS6KB1 | 17 | + |
| exon-exon | ITPRID2 | 2 | + | PPP1R1C | | + |
| exon-exon | RAB8A | 19 | + | ADAM18 | 8 | + |
| exon-exon | MRC2 | 17 | + | LRRC37A3 | 17 | - |
| exon-exon | MAP3K3 | 17 | + | LRRC37A3 | 17 | - |
| exon-exon | ERN1 | 17 | - | SMURF2 | 17 | - |
| exon-exon | ELP4 | 11 | + | IMMP1L | 11 | - |
| exon-exon | NSF | | + | SAMD12 | 8 | - |
| exon-exon | NCOA2 | 8 | - | SNTG1 | | + |
| exon-exon | RALGAPA2 | 20 | - | LARGE1 | 22 | - |
| exon-exon | ZKSCAN5 | 7 | + | HELLS | 10 | + |
| exon-exon | ZC3H13 | 13 | - | CIAO2A | 15 | - |
| exon-exon | PRKCE | 2 | + | SNX17 | 2 | + |
| exon-exon | NFATC2 | 20 | - | RAE1 | 20 | + |
| exon-exon | ARPC1B | 7 | + | PDAP1 | 7 | - |
| exon-exon | UBE2G1 | 17 | - | ZZEF1 | 17 | - |
| exon-exon | SPINT1 | 15 | + | HIF1A | 14 | + |
| exon-exon | LRRFIP1 | 2 | + | MLPH | 2 | + |
| exon-exon | FBXL7 | 5 | + | TRIO | 5 | + |
| exon-exon | FAF1 | 1 | - | EPS15 | 1 | - |
| exon-exon | UHRF1 | | + | PIAS4 | 19 | + |
| exon-exon | LSR | | + | SCN1B | | + |
| exon-exon | ANXA9 | | + | NUP210L | 1 | - |
| exon-exon | ZNF619 | | + | ADAMTS9 | | - |
| exon-exon | PSPC1 | 13 | - | LATS2 | 13 | - |
| exon-exon | DIP2C | 10 | - | SFMBT2 | 10 | - |
| exon-exon | TTC27 | | + | BIRC6 | 2 | + |
| exon-exon | SNX14 | 6 | - | PPP2R2A | 8 | + |
| exon-exon | MAP4 | 3 | - | CBFA2T3 | | - |
| exon-exon | LAMA3 | 18 | + | RBBP8 | 18 | + |
| exon-exon | TOM1L1 | 17 | + | RPA2 | 1 | - |
| exon-exon | YAP1 | 11 | + | MAML2 | 11 | - |
| exon-exon | OGG1 | 3 | + | EEF1D | 8 | - |
| exon-exon | CDKAL1 | 6 | + | NAB1 | 2 | + |
| exon-exon | IGF2R | 6 | + | SYTL3 | 6 | + |
| exon-exon | FBXO22 | 15 | + | UBE2Q2 | 15 | + |
| exon-exon | EPHA2 | | - | FBXO42 | 1 | - |
| exon-exon | CHD3 | 17 | + | DNAH2 | 17 | + |
| exon-exon | PPP4R3A | | - | HEATR3 | 16 | + |
| exon-exon | SPIDR | | + | CYRIB | 8 | - |
| exon-exon | CAPN5 | 11 | + | NDUFV1 | 11 | + |
| exon-exon | ZCCHC7 | | + | POLR1E | | + |
| exon-exon | HACD2 | 3 | - | HIP1 | 7 | - |
| exon-exon | DYM | 18 | - | MBD2 | 18 | - |
| exon-exon | PALM2AKAP2 | 9 | + | ACTG1 | 17 | - |
| exon-exon | ABCC1 | 16 | + | BRD7 | 16 | - |
| exon-exon | RNF41 | | - | CS | 12 | - |
| exon-exon | MAGOH | 1 | - | ACADM | 1 | + |
| exon-exon | PTMA | 2 | + | PTMS | 12 | + |
| exon-exon | IQGAP1 | 15 | + | PRC1 | 15 | - |
| exon-exon | ARID4B | 1 | - | BCL6 | 3 | - |
| exon-exon | IRAG2 | | + | SOX5 | | - |
| exon-exon | UIMC1 | 5 | - | NSD1 | 5 | + |
| exon-exon | TFG | 3 | + | ALK | 2 | - |
| exon-exon | RRP1B | 21 | + | TRAPPC10 | 21 | + |
| exon-exon | SWAP70 | 11 | + | WEE1 | 11 | + |
| exon-exon | NSMCE2 | 8 | + | IER3IP1 | 18 | - |
| exon-exon | CLSTN1 | 1 | - | MRPL51 | 12 | - |
| exon-exon | PPIE | 1 | + | MYCL | 1 | - |
| exon-exon | CD274 | | + | DMRT1 | | + |
| exon-exon | WDR7 | 18 | + | CCBE1 | 18 | - |
| exon-exon | WDR60 | 7 | + | ARHGEF7 | 13 | + |
| exon-exon | GIGYF2 | 2 | + | SLC6A20 | 3 | - |
| exon-exon | ARID2 | 12 | + | TMEM117 | 12 | + |
| exon-exon | SCARB1 | 12 | - | TMEM9 | 1 | - |
| exon-exon | RAF1 | 3 | - | ACTR2 | 2 | + |
| exon-exon | MAP4K2 | 11 | - | CDC42BPG | 11 | - |
| exon-exon | NFU1 | 2 | - | TRIM24 | 7 | + |
| exon-exon | HINT1 | 5 | - | RAPGEF6 | 5 | - |
| exon-exon | NFE2L1 | 17 | + | SKAP1 | | - |
| exon-exon | KMT2A | 11 | + | CLTC | 17 | + |
| exon-exon | EFNA4 | 1 | + | RUSC1 | 1 | + |
| exon-exon | RAB3B | | - | TXNDC12 | 1 | - |
| exon-exon | NUP107 | 12 | + | RAP1BL | 5 | - |
| exon-exon | LAMA3 | 18 | + | PLA2G1B | 12 | - |
| exon-exon | CPNE7 | | + | RPL13 | 16 | + |
| exon-exon | PCMT1 | 6 | + | LATS1 | | - |
| exon-exon | PEX14 | 1 | + | PGD | 1 | + |
| exon-exon | NFAT5 | 16 | + | VPS4A | 16 | + |
| exon-exon | NF1 | 17 | + | EPHB3 | | + |
| exon-exon | CD63 | 12 | - | COLGALT1 | 19 | + |
| exon-exon | C12orf66 | 12 | - | TMEM132B | 12 | + |
| exon-exon | STOM | 9 | - | TTLL11 | | - |
| exon-exon | RPS6KB2 | | + | KDM2A | 11 | + |
| exon-exon | ERLIN2 | | + | TMEM68 | | - |
| exon-exon | PXN | 12 | - | PLA2G1B | 12 | - |
| exon-exon | RPRD1A | 18 | - | PRKDC | 8 | - |
| exon-exon | KPNB1 | 17 | + | ZNF595 | 4 | + |
| exon-exon | HNRNPU | 1 | - | YWHAE | 17 | - |
| exon-exon | CPEB2 | 4 | + | CC2D2A | 4 | + |
| exon-exon | YIPF1 | | - | TMEM59 | 1 | - |
| exon-exon | POLE4 | | + | HK2 | 2 | + |
| exon-exon | EPHA2 | | - | ARHGEF19 | | - |
| exon-exon | FAM133DP | 2 | - | CDK6 | 7 | - |
| exon-exon | YAP1 | 11 | + | CUL5 | 11 | + |
| exon-exon | PCNP | 3 | + | TFG | 3 | + |
| exon-exon | NARS2 | 11 | - | MMP10 | 11 | - |
| exon-exon | DDX10 | 11 | + | CUL5 | 11 | + |
| exon-exon | GPR180 | | + | GPC6 | 13 | + |
| exon-exon | HNRNPA2B1 | 7 | - | PPIAP29 | 6 | + |
| exon-exon | ELOVL6 | 4 | - | ENPEP | 4 | + |
| exon-exon | TANC1 | 2 | + | PKP4 | 2 | + |
| exon-exon | MYO5C | 15 | - | SHC4 | 15 | - |
| exon-exon | STK17B | 2 | - | HECW2 | 2 | - |
| exon-exon | SORL1 | 11 | + | PCCA | 13 | + |
| exon-exon | GPLD1 | 6 | - | ALDH5A1 | 6 | + |
| exon-exon | RABGAP1L | 1 | + | KLHL20 | 1 | + |
| exon-exon | PPIL4 | 6 | - | KATNA1 | 6 | - |
| exon-exon | NADSYN1 | 11 | + | TESMIN | | - |
| exon-exon | MYO1C | 17 | - | SLC43A2 | 17 | - |
| exon-exon | CLIC4 | 1 | + | SRRM1 | 1 | + |
| exon-exon | CYLD | 16 | + | KLF3 | 4 | + |
| exon-exon | PRR14L | 22 | - | SMARCD2 | 17 | - |
| exon-exon | CARM1 | 19 | + | DNM2 | 19 | + |
| exon-exon | ARHGAP26 | 5 | + | PLPP1 | 5 | - |
| exon-exon | PTPN23 | 3 | + | ELP6 | 3 | - |
| exon-exon | ANKRD27 | 19 | - | SLC7A9 | | - |
| exon-exon | DNAJC3 | 13 | + | VWA8 | 13 | - |
| exon-exon | LRBA | 4 | - | SH3D19 | 4 | - |
| exon-exon | BTD | 3 | + | FGD5 | 3 | + |
| exon-exon | CBFB | 16 | + | NAE1 | 16 | - |
| exon-exon | BAIAP2L1 | | - | CBLN4 | | - |
| exon-exon | AHCYL1 | 1 | + | ATP6V1G2-DDX39B | 6 | - |
| exon-exon | SRP54 | 14 | + | CCDC175 | | - |
| exon-exon | RPRD2 | 1 | + | GOLPH3L | | - |
| exon-exon | ANP32E | 1 | - | GOLPH3L | | - |
| exon-exon | TRA2A | 7 | - | DNAH11 | | + |
| exon-exon | GATA6 | | + | DSG1 | 18 | + |
| exon-exon | NT5DC1 | 6 | + | FRK | 6 | - |
| exon-exon | BCAS4 | 20 | + | PTPN1 | 20 | + |
| exon-exon | FRK | | - | NT5DC1 | 6 | + |
| exon-exon | TRPS1 | 8 | - | LASP1 | 17 | + |
| exon-exon | PPM1D | | + | TRAPPC9 | 8 | - |
| exon-exon | DDX5 | 17 | - | DEPTOR | 8 | + |
| exon-exon | ARID1A | 1 | + | WDTC1 | 1 | + |
| exon-exon | AKT3 | 1 | - | P2RX5-TAX1BP3 | 17 | - |
| exon-exon | VSTM2L | | + | CTNNBL1 | 20 | + |
| exon-exon | TATDN1 | | - | GSDMB | 17 | - |
| exon-exon | ZCCHC2 | 18 | + | RELCH | 18 | + |
| exon-exon | LMAN2 | 5 | - | KAT6B | 10 | + |
| exon-exon | FGFR2 | 10 | - | ATE1 | 10 | - |
| exon-exon | FBXO28 | | + | IFI16 | 1 | + |
| exon-exon | UVRAG | 11 | + | MOGAT2 | | + |
| exon-exon | TYRO3 | 15 | + | RTF1 | 15 | + |
| exon-exon | SPTAN1 | 9 | + | GLE1 | 9 | + |
| exon-exon | SNRPD3 | 22 | + | UPB1 | | + |
| exon-exon | RIMS2 | | + | ATP6V1C1 | 8 | + |
| exon-exon | TYMS | 18 | + | C1QTNF3-AMACR | 5 | - |
| exon-exon | OSGIN1 | 16 | + | CDH13 | 16 | + |
| exon-exon | MFSD1 | 3 | + | RSRC1 | | + |
| exon-exon | C12orf49 | 12 | - | ATP10A | | - |
| exon-exon | STN1 | 10 | - | CCSER2 | 10 | + |
| exon-exon | SOCS7 | 17 | + | BDNF | | - |
| exon-exon | ACACA | 17 | - | DDX52 | 17 | - |
| exon-exon | REV1 | 2 | - | SUPT3H | 6 | - |
| exon-exon | TC2N | 14 | - | FBLN5 | | - |
| exon-exon | USP31 | 16 | - | CRYL1 | 13 | - |
| exon-exon | PSMA6 | 14 | + | PRORP | 14 | + |
| exon-exon | TANC2 | 17 | + | CA4 | | + |
| exon-exon | TAF4 | 20 | - | BRIP1 | | - |
| exon-exon | SMARCA4 | 19 | + | CARM1 | 19 | + |
| exon-exon | RPS6KB1 | 17 | + | VMP1 | 17 | + |
| exon-exon | RBM6 | 3 | + | BCAR1 | 16 | - |
| exon-exon | MYO9B | 19 | + | FCHO1 | | + |
| exon-exon | MACROD2 | 20 | + | C14orf132 | 14 | + |
| exon-exon | DEPDC1B | 5 | - | ELOVL7 | 5 | - |
| exon-exon | PPIA | 7 | + | OGDH | 7 | + |
| exon-exon | VPS35L | 16 | + | IQCK | 16 | + |
| exon-exon | BCAS3 | 17 | + | REG4 | 1 | - |
| exon-exon | ARFGEF2 | 20 | + | SULF2 | 20 | - |
| exon-exon | AHCYL1 | 1 | + | RAD51C | 17 | + |
| exon-exon | NOTCH1 | 9 | - | NUP214 | 9 | + |
| exon-exon | KCNK2 | 1 | + | PITPNC1 | 17 | + |
| exon-exon | INIP | 9 | - | C5 | | - |
| exon-exon | TNPO1 | 5 | + | MCCC2 | 5 | + |
| exon-exon | PIEZO1 | 16 | - | CBFA2T3 | | - |
| exon-exon | PHF12 | 17 | - | MYO18A | 17 | - |
| exon-exon | IVD | 15 | + | KNSTRN | 15 | + |
| exon-exon | GTF2B | 1 | - | MUTYH | 1 | - |
| exon-exon | FLVCR2 | 14 | + | BATF | | + |
| exon-exon | FLNB | 3 | + | SLMAP | 3 | + |
| exon-exon | ANKRD36B | 2 | - | FAM178B | 2 | - |
| exon-exon | ANP32E | 1 | - | PTMAP5 | 13 | + |
| exon-exon | UTRN | 6 | + | RSPH9 | 6 | + |
| exon-exon | UBE2E1 | 3 | + | COL24A1 | | - |
| exon-exon | TMEM123 | 11 | - | MMP20 | | - |
| exon-exon | SLC26A6 | | - | PRKAR2A | 3 | - |
| exon-exon | MTHFD2 | 2 | + | TAF1B | | + |
| exon-exon | SDHDP7 | | + | DLAT | 11 | + |
| exon-exon | SCAPER | 15 | - | TM6SF1 | | + |
| exon-exon | PRMT1 | 19 | + | BCL2L12 | 19 | + |
| exon-exon | PRKCE | 2 | + | MBOAT2 | 2 | - |
| exon-exon | MTAP | 9 | + | PCDH7 | | + |
| exon-exon | MBOAT2 | 2 | - | PRKCE | 2 | + |
| exon-exon | KIAA0232 | 4 | + | S100P | | + |
| exon-exon | DOC2A | 16 | - | MAPK3 | 16 | - |
| exon-exon | ACBD6 | 1 | - | RRP15 | | + |
| exon-exon | CHST11 | 12 | + | TXNRD1 | 12 | + |
| exon-exon | HARS1 | 5 | - | UBE2D2 | 5 | + |
| exon-exon | USP32 | 17 | - | NLK | 17 | + |
| exon-exon | RABGAP1L | 1 | + | ACBD6 | | - |
| exon-exon | INTS2 | 17 | - | RPS6KB1 | 17 | + |
| exon-exon | DOCK8 | 9 | + | CBWD4P | | - |
| exon-exon | CDK7 | 5 | + | MATR3 | 5 | + |
| exon-exon | PIK3CB | 3 | - | NVL | 1 | - |
| exon-exon | TRMT11 | | + | NCOA7 | | + |
| exon-exon | STRADB | 2 | + | NOP58 | 2 | + |
| exon-exon | PHF20L1 | 8 | + | SAMD12 | 8 | - |
| exon-exon | FGFR1 | 8 | - | C1QTNF3-AMACR | 5 | - |
| exon-exon | PDCD1LG2 | 9 | + | TPGS2 | 18 | - |
| exon-exon | GALNT7 | | + | ORC4 | 2 | - |
| exon-exon | BRWD1 | 21 | - | HLCS | 21 | - |
| exon-exon | NFIA | 1 | + | EHF | 11 | + |
| exon-exon | APP | 21 | - | CYYR1 | | - |
| exon-exon | WNK1 | 12 | + | CWC22 | | - |
| exon-exon | STK10 | | - | RACK1 | 5 | - |
| exon-exon | RFT1 | 3 | - | UQCRC2 | 16 | + |
| exon-exon | PTPRJ | 11 | + | LPXN | 11 | - |
| exon-exon | POLA2 | 11 | + | CAPN1 | 11 | + |
| exon-exon | EIF2A | 3 | + | MED12L | 3 | + |
| exon-exon | OAT | 10 | - | ITCH | 20 | + |
| exon-exon | EXOC7 | 17 | - | CYTH1 | 17 | - |
| exon-exon | EFTUD2 | 17 | - | PDE4DIP | 1 | + |
| exon-exon | TRAPPC9 | 8 | - | VSTM4 | 10 | - |
| exon-exon | LIMCH1 | 4 | + | UCHL1 | 4 | + |
| exon-exon | TCF3 | 19 | - | KLF16 | | - |
| exon-exon | SLC9A7 | | - | ALDH7A1 | 5 | - |
| exon-exon | RABGGTB | 1 | + | ACADM | 1 | + |
| exon-exon | ATF6B | 6 | - | LOC643167 | | + |
| exon-exon | AGBL4 | 1 | - | FAF1 | 1 | - |
| exon-exon | SPAG9 | 17 | - | NGFR | 17 | + |
| exon-exon | SLC37A1 | 21 | + | ABCG1 | 21 | + |
| exon-exon | PDE8A | 15 | + | SLC28A1 | | + |
| exon-exon | NGFR | | + | SPAG9 | 17 | - |
| exon-exon | EIF3A | 10 | - | PRDX3P1 | | - |
| exon-exon | ZNF79 | 9 | + | RALGPS1 | 9 | + |
| exon-exon | VPS18 | 15 | + | ZFYVE19 | 15 | + |
| exon-exon | TRAK1 | 3 | + | ARL13B | 3 | + |
| exon-exon | VAV2 | 9 | - | TRUB2 | 9 | - |
| exon-exon | TONSL | | - | STMN3 | 20 | - |
| exon-exon | LRCH1 | 13 | + | NADSYN1 | 11 | + |
| exon-exon | RAD21 | 8 | - | EXT1 | 8 | - |
| exon-exon | PLA2R1 | 2 | - | RBMS1 | 2 | - |
| exon-exon | IFFO2 | 1 | - | HP1BP3 | 1 | - |
| exon-exon | ERO1A | 14 | - | FERMT2 | 14 | - |
| exon-exon | EIF3K | 19 | + | CYP39A1 | | - |
| exon-exon | DPYSL3 | 5 | - | JAKMIP2 | 5 | - |
| exon-exon | LOC100130394 | | - | DHX30 | 3 | + |
| exon-exon | SETP8 | | + | ANP32E | | - |
| exon-exon | TRUB2 | 9 | - | MRPL47 | | - |
| exon-exon | TBC1D17 | 19 | + | BCL2L12 | 19 | + |
| exon-exon | POFUT1 | 20 | + | TM9SF4 | 20 | + |
| exon-exon | PLXND1 | 3 | - | TMCC1 | 3 | - |
| exon-exon | MDM4 | 1 | + | NT5C3A | 7 | - |
| exon-exon | KLK5 | 19 | - | CDH23 | 10 | + |
| exon-exon | AKAP13 | 15 | + | PDE8A | 15 | + |
| exon-exon | AGPAT5 | 8 | + | MCPH1 | 8 | + |
| exon-exon | TMEM241 | 18 | - | HM13 | 20 | + |
| exon-exon | HELZ | 17 | - | HECW1 | 7 | + |
| exon-exon | NSMF | | - | PNPLA7 | 9 | - |
| exon-exon | COL4A2 | 13 | + | NARS2 | 11 | - |
| exon-exon | ZMPSTE24 | 1 | + | CAP1 | 1 | + |
| exon-exon | TESK2 | | - | PDZK1IP1 | 1 | - |
| exon-exon | PREX1 | 20 | - | ARFGEF2 | 20 | + |
| exon-exon | MOB3B | 9 | - | TEK | 9 | + |
| exon-exon | ZFYVE9 | 1 | + | USP33 | 1 | - |
| exon-exon | TMEM39A | | - | RPL22L1 | 3 | - |
| exon-exon | STRN4 | 19 | - | AP2S1 | 19 | - |
| exon-exon | KIRREL1 | 1 | + | ZFYVE9 | 1 | + |
| exon-exon | MBD2 | 18 | - | PTGR1 | 9 | - |
| exon-exon | FAM126B | 2 | - | SLC39A10 | 2 | + |
| exon-exon | ST7 | 7 | + | PRKAG2 | 7 | - |
| exon-exon | EHMT1 | 9 | + | COL5A1 | 9 | + |
| exon-exon | CENPP | 9 | + | CCSER1 | 4 | + |
| exon-exon | TBC1D31 | 8 | + | NUP133 | 1 | - |
| exon-exon | SNED1 | 2 | + | DNAH7 | | - |
| exon-exon | QPCTL | | + | MRPL4 | 19 | + |
| exon-exon | LRIG3 | 12 | - | MDM2 | 12 | + |
| exon-exon | PAGR1 | 16 | + | CDH1 | 16 | + |
| exon-exon | GXYLT1 | | - | PPHLN1 | 12 | + |
| exon-exon | GON4L | 1 | - | PRPF6 | 20 | + |
| exon-exon | TRPC4AP | 20 | - | MRPL45 | | + |
| exon-exon | TRIM37 | 17 | - | MYO19 | 17 | - |
| exon-exon | CPNE1 | 20 | - | PI3 | | + |
| exon-exon | MED1 | 17 | - | STXBP4 | | + |
| exon-exon | GLB1 | 3 | - | CMTM7 | 3 | + |
| exon-exon | PLEKHB2 | 2 | + | ARHGEF4 | 2 | + |
| exon-exon | CDKAL1 | 6 | + | MOB3B | 9 | - |
| exon-exon | LIMA1 | 12 | - | USP22 | 17 | - |
| exon-exon | DCUN1D4 | 4 | + | N4BP2L2 | 13 | - |
| exon-exon | CIZ1 | 9 | - | LCN2 | 9 | + |
| exon-exon | UBE2K | 4 | + | PDS5A | 4 | - |
| exon-exon | ABL1 | 9 | + | BCR | 22 | + |
| exon-exon | RUNX1 | 21 | - | TSPEAR | 21 | - |
| exon-exon | ACTR8 | 3 | - | ANP32A | 15 | - |
| exon-exon | TGFB1 | 19 | - | HNRNPUL1 | 19 | + |
| exon-exon | KIF13A | 6 | - | TPMT | 6 | - |
| exon-exon | ATL2 | 2 | - | HNRNPLL | 2 | - |
| exon-exon | EMSY | 11 | + | KMT5B | | - |
| exon-exon | ATP13A1 | 19 | - | ZNF14 | 19 | - |
| exon-exon | USP34 | 2 | - | CCT4 | 2 | - |
| exon-exon | SREBF2 | 22 | + | MEI1 | 22 | + |
| exon-exon | MBNL1 | 3 | + | RAF1 | 3 | - |
| exon-exon | ELAVL1 | | - | TYK2 | 19 | - |
| exon-exon | RPL9P8 | 15 | - | LIAS | | + |
| exon-exon | PPP1R9A | | + | XRCC2 | 7 | - |
| exon-exon | FGFR1OP2 | 12 | + | FGFR1 | 8 | - |
| exon-exon | ARL13B | | + | FRMD4B | | - |
| exon-exon | CDC37 | 19 | - | IL27RA | | + |
| exon-exon | TRMT112 | 11 | - | PRDX5 | 11 | + |
| exon-exon | KRT19 | 17 | - | SLC47A1 | 17 | + |
| exon-exon | GMCL1 | 2 | + | ANXA4 | 2 | + |
| exon-exon | ATP2A2 | 12 | + | IFT81 | | + |
| exon-exon | WDFY2 | | + | SERPINE3 | | + |
| exon-exon | VTI1A | 10 | + | UBE2D1 | | + |
| exon-exon | UACA | 15 | - | ARID1A | 1 | + |
| exon-exon | DCAF10 | 9 | + | CENPP | 9 | + |
| exon-exon | UBE2E2 | 3 | + | NUP210 | 3 | - |
| exon-exon | WSB1 | 17 | + | HDAC5 | 17 | - |
| exon-exon | UNK | 17 | + | FAM104A | 17 | - |
| exon-exon | CFTR | 7 | + | MET | 7 | + |
| exon-exon | NIBAN2 | 9 | - | METRNL | | + |
| exon-exon | PHF20 | | + | RBM39 | 20 | - |
| exon-exon | LUC7L2 | 7 | + | UBN2 | 7 | + |
| exon-exon | LSM4 | 19 | - | ELL | 19 | - |
| exon-exon | FLNB | 3 | + | SLMAP | 3 | + |
| exon-exon | BMPR2 | 2 | + | WDR12 | 2 | - |
| exon-exon | UBE2E1 | 3 | + | WNT7A | | - |
| exon-exon | RPRD2 | 1 | + | RXYLT1 | 12 | + |
| exon-exon | PPME1 | 11 | + | PGM2L1 | 11 | - |
| exon-exon | UBE2V2 | 8 | + | PRKAA1 | 5 | - |
| exon-exon | SLC27A4 | 9 | + | STXBP1 | 9 | + |
| exon-exon | NDUFA5 | 7 | - | SND1 | 7 | + |
| exon-exon | DENND10 | 10 | + | GRK5 | 10 | + |
| exon-exon | VAV2 | 9 | - | DEUP1 | | + |
| exon-exon | TMX2-CTNND1 | 11 | + | SMTNL1 | | + |
| exon-exon | TBC1D22A | 22 | + | GRAMD4 | | + |
| exon-exon | ADGRF1 | | - | TNFRSF21 | 6 | - |
| exon-exon | TRANK1 | | - | ULK4 | 3 | - |
| exon-exon | CAPZA2 | | + | MET | 7 | + |
| exon-exon | ARID1A | 1 | + | RPS6KA1 | 1 | + |
| exon-exon | USP1 | 1 | + | ADAM9 | 8 | + |
| exon-exon | SLC30A7 | 1 | + | UROC1 | | - |
| exon-exon | ZC3H12D | 6 | - | UST | | + |
| exon-exon | PTMA | 2 | + | PPIL2 | 22 | + |
| exon-exon | TENT4A | 5 | + | NDUFS6 | | + |
| exon-exon | FGFR2 | 10 | - | CD44 | 11 | + |
| exon-exon | CMIP | 16 | + | DYNLRB2 | | + |
| exon-exon | TMEM68 | 8 | - | PEX5L | 3 | - |
| exon-exon | ARHGEF10L | 1 | + | ZNF595 | 4 | + |
| exon-exon | SUFU | 10 | + | GBF1 | 10 | + |
| exon-exon | ERBB2 | 17 | + | LTBP4 | 19 | + |
| exon-exon | SRRM2 | 16 | + | PRPF8 | 17 | - |
| exon-exon | ABR | 17 | - | YWHAE | 17 | - |
| exon-exon | TADA2A | | + | C17orf78 | | + |
| exon-exon | FUT8 | 14 | + | NUMB | 14 | - |
| exon-exon | BABAM1 | 19 | + | OCEL1 | | + |
| exon-exon | SBF2 | 11 | - | RBBP6 | 16 | + |
| exon-exon | MPG | 16 | + | MXI1 | 10 | + |
| exon-exon | LRP8 | 1 | - | HSPG2 | 1 | - |
| exon-exon | FARP2 | 2 | + | THAP4 | | - |
| exon-exon | ARMC9 | 2 | + | PSMD1 | 2 | + |
| exon-exon | PIGG | 4 | + | CHRDL2 | 11 | - |
| exon-exon | KLHL7 | 7 | + | TPCN2 | | + |
| exon-exon | FGF19 | | - | KLHL7 | 7 | + |
| exon-exon | KIDINS220 | 2 | - | SND1 | 7 | + |
| exon-exon | PRPSAP2 | 17 | + | FBXW10 | 17 | + |
| exon-exon | MAPK8IP3 | 16 | + | JPT2 | 16 | + |
| exon-exon | GCN1 | 12 | - | LAIR1 | | - |
| exon-exon | GPD1L | 3 | + | EDEM1 | 3 | + |
| exon-exon | RPS6KB1 | 17 | + | SNF8 | 17 | - |
| exon-exon | FXR1 | 3 | + | USP13 | | + |
| exon-exon | STARD3 | 17 | + | DOK5 | | + |
| exon-exon | WFDC12 | | + | PI3 | | + |
| exon-exon | TATDN1 | | - | GSDMB | 17 | - |
| exon-exon | CSE1L | 20 | + | LOC105372649 | 20 | + |
| exon-exon | ANKHD1-EIF4EBP3 | 5 | + | PCDH1 | 5 | - |
| exon-exon | SETD3 | 14 | - | CCDC85C | | - |
| exon-exon | SUMF1 | 3 | - | LRRFIP2 | 3 | - |
| exon-exon | FANCD2 | | + | CMTM6 | 3 | - |
| exon-exon | RECK | 9 | + | ALX3 | | - |
| exon-exon | RB1 | 13 | + | ITM2B | 13 | + |
| exon-exon | RELB | | + | NECTIN2 | | + |
| exon-exon | CDK2 | 12 | + | RAB5B | | + |
| exon-exon | CD44 | 11 | + | SLC1A2 | 11 | - |
| exon-exon | UAP1 | | + | RGS4 | 1 | + |
| exon-exon | TANGO6 | 16 | + | UTP4 | 16 | + |
| exon-exon | RBPMS | 8 | + | CD53 | 1 | + |
| exon-exon | DNAJC21 | 5 | + | RAI14 | 5 | + |
| exon-exon | TRIT1 | | - | PPIEL | 1 | - |
| exon-exon | TRIT1 | | - | MYCL | 1 | - |
| exon-exon | TP73 | | + | PACSIN2 | 22 | - |
| exon-exon | RNF187 | 1 | + | RAB11FIP3 | 16 | + |
| exon-exon | RLF | 1 | + | TRIT1 | 1 | - |
| exon-exon | LASP1 | 17 | + | CPXM1 | 20 | - |
| exon-exon | RLF | 1 | + | PPIE | 1 | + |
| exon-exon | AHCYL2 | 7 | + | TMEM178B | 7 | + |
| exon-exon | AP2A2 | 11 | + | SBF2 | 11 | - |
| exon-exon | AP2A2 | 11 | + | SBF2 | 11 | - |
| exon-exon | APEH | 3 | + | SHISA5 | 3 | - |
| exon-exon | DENND5B | 12 | + | B4GALNT3 | 12 | - |
| exon-exon | BCR | 22 | + | LZTR1 | 22 | + |
| exon-exon | BIN2 | 12 | - | CELA1 | | - |
| exon-exon | CLPSL1 | | - | BRPF3 | 6 | - |
| exon-exon | RLF | 1 | + | MYCL | 1 | - |
| exon-exon | CBL | 11 | + | FBXO2 | 1 | - |
| exon-exon | CCM2 | | + | OGDH | 7 | + |
| exon-exon | CD81 | 11 | + | SPAG6 | 10 | + |
| exon-exon | CDK17 | 12 | - | KCNC2 | 12 | - |
| exon-exon | CDK4 | 12 | - | TSFM | 12 | + |
| exon-exon | RLF | 1 | + | COL9A2 | | - |
| exon-exon | CLASRP | 19 | + | SYMPK | 19 | - |
| exon-exon | CLSTN1 | 1 | - | KAZN | 1 | + |
| exon-exon | COG3 | 13 | + | GPC6 | 13 | + |
| exon-exon | CPNE5 | 6 | - | ANXA6 | 5 | - |
| exon-exon | CTDSP2 | 12 | - | ATP23 | 12 | + |
| exon-exon | LINC01549 | | - | CXADR | 21 | - |
| exon-exon | FAM117A | 17 | - | LGALS9 | 17 | + |
| exon-exon | FAM155A | 13 | - | COL4A1 | 13 | - |
| exon-exon | FARP2 | 2 | + | DTNB | 2 | - |
| exon-exon | NUP210 | 3 | - | WNT7A | | - |
| exon-exon | FGFR3 | 4 | + | TACC3 | 4 | + |
| exon-exon | FRMD4A | 10 | - | PFKP | 10 | + |
| exon-exon | GLTP | 12 | - | VPS29 | 12 | - |
| exon-exon | HUWE1 | X | - | RIBC1 | | + |
| exon-exon | FUBP1 | 1 | - | CHMP1A | 16 | - |
| exon-exon | TRIM59-IFT80 | 3 | - | MLH1 | 3 | + |
| exon-exon | IL1RAP | | + | FGF12 | 3 | - |
| exon-exon | LANCL2 | | + | DNAH11 | | + |
| exon-exon | LHFPL6 | 13 | - | SERP2 | 13 | + |
| exon-exon | MARCHF6 | 5 | + | MYO10 | 5 | - |
| exon-exon | MED13L | 12 | - | GRIP1 | 12 | - |
| exon-exon | KMT2C | 7 | - | CHGB | 20 | + |
| exon-exon | CENPT | 16 | - | DPEP3 | 16 | - |
| exon-exon | MTAP | 9 | + | C9orf92 | 9 | - |
| exon-exon | NEK6 | 9 | + | RXRA | | + |
| exon-exon | NFATC3 | 16 | + | CPNE2 | 16 | + |
| exon-exon | PITPNA | 17 | - | RAD51C | 17 | + |
| exon-exon | PLA2G6 | 22 | - | CRYBB1 | | - |
| exon-exon | PLAGL2 | 20 | - | HCK | 20 | + |
| exon-exon | BGN | X | - | PODXL | 7 | + |
| exon-exon | ZNF736 | 7 | + | FAM120B | | + |
| exon-exon | PTN | 7 | - | DGKI | 7 | - |
| exon-exon | PTPRZ1 | 7 | + | MET | 7 | + |
| exon-exon | SNTG1 | 8 | - | NECTIN2 | | - |
| exon-exon | RASSF7 | 11 | + | SCUBE2 | 11 | - |
| exon-exon | RNF213 | 17 | + | SLC26A11 | 17 | + |
| exon-exon | USP43 | 17 | + | CNTLN | 9 | + |
| exon-exon | SH3GL1 | 19 | - | CHAF1A | 19 | + |
| exon-exon | SLC6A8 | | + | GABRA3 | X | - |
| exon-exon | ST7 | 7 | + | CTTNBP2 | 7 | - |
| exon-exon | TCF7L1 | 2 | + | KIF1B | 1 | + |
| exon-exon | TGFB1 | 19 | - | SAE1 | 19 | + |
| exon-exon | TPM3 | 1 | - | ADAR | 1 | - |
| exon-exon | TPT1 | 13 | - | AADAT | 4 | - |
| exon-exon | FIBCD1 | | + | TTLL11 | | + |
| exon-exon | URI1 | 19 | + | SLC6A20 | 3 | - |
| exon-exon | TYW3 | 1 | + | SCRG1 | 4 | - |
| exon-exon | VEZT | 12 | + | CORO1C | 12 | - |
| exon-exon | BRK1 | 3 | - | VHL | 3 | - |
| exon-exon | ZMIZ1 | 10 | + | MAT1A | 10 | - |
| exon-exon | ZNF660-ZNF197 | 3 | + | CHMP2B | 3 | + |
| exon-exon | NKAIN2 | 6 | + | RNF217 | | + |
| exon-exon | ITGB3BP | 1 | + | ADNP2 | 18 | - |
| exon-exon | ADNP2 | | + | ITGB3BP | 1 | - |
| exon-exon | AGAP2 | 12 | - | TSFM | 12 | + |
| exon-exon | B4GALNT3 | 12 | + | DENND5B | 12 | - |
| exon-exon | BAZ2A | 12 | - | METTL1 | 12 | - |
| exon-exon | BAZ2A | 12 | - | METTL1 | 12 | - |
| exon-exon | ITGB3 | 17 | + | YARS1 | 1 | - |
| exon-exon | NELL1 | | + | SLC6A5 | | + |
| exon-exon | BCAT1 | 12 | - | FIP1L1 | 4 | + |
| exon-exon | BRPF3 | 6 | + | CLPSL1 | | + |
| exon-exon | C1orf21 | 1 | + | MIXL1 | | + |
| exon-exon | SMAD9 | | + | C2CD3 | 11 | + |
| exon-exon | RRM2 | 2 | + | PRMT8 | | + |
| exon-exon | CCDC136 | | + | FKBP9P1 | | - |
| exon-exon | FKBP9P1 | | + | CCDC136 | | - |
| exon-exon | GALNT8 | 12 | + | PRMT8 | | + |
| exon-exon | CDK17 | 12 | - | KCNC2 | 12 | - |
| exon-exon | CHFR | 12 | - | SMARCD1 | 12 | + |
| exon-exon | ARHGEF11 | 1 | - | EPN1 | 19 | + |
| exon-exon | CTDSP2 | 12 | - | SLC6A15 | 12 | - |
| exon-exon | CTNND1 | 11 | + | TMEM135 | 11 | + |
| exon-exon | LINC01549 | | - | CXADR | 21 | - |
| exon-exon | DHX35 | | + | LPAR1 | 9 | - |
| exon-exon | EDC3 | 15 | - | COX5A | 15 | - |
| exon-exon | ADCK5 | 8 | + | C8orf34 | 8 | + |
| exon-exon | EGFR | 7 | + | VSTM2A | | + |
| exon-exon | ELAVL2 | | - | PLGRKT | 9 | - |
| exon-exon | ELK1 | X | - | GPRC5A | 12 | + |
| exon-exon | ELK1 | X | - | GPRC5A | 12 | + |
| exon-exon | ETV6 | 12 | + | NELL2 | 12 | - |
| exon-exon | MVK | | - | FAM222A | | - |
| exon-exon | FAM222A | | + | SIRT4 | | + |
| exon-exon | ZNF787 | 19 | - | E2F3 | 6 | + |
| exon-exon | APBB1IP | 10 | - | GOLPH3 | 5 | + |
| exon-exon | GRIP1 | 12 | - | RNFT2 | | + |
| exon-exon | IP6K2 | 3 | - | USP19 | 3 | - |
| exon-exon | GP1BA | | - | IQSEC1 | 3 | + |
| exon-exon | JAK1 | 1 | - | HIVEP3 | 1 | - |
| exon-exon | MARF1 | 16 | - | SPR | 2 | + |
| exon-exon | RPH3AL | 17 | - | TENM1 | X | - |
| exon-exon | KSR1 | 17 | + | PKN3 | | + |
| exon-exon | AP1M2 | 19 | + | LINC00662 | 19 | + |
| exon-exon | LHFPL6 | 13 | + | LNX2 | 13 | + |
| exon-exon | PTPRN2 | 7 | - | CADM2 | | + |
| exon-exon | MAX | 14 | - | TTC7B | 14 | - |
| exon-exon | MECOM | 3 | - | GAP43 | 3 | + |
| exon-exon | MID1 | | - | ARHGAP6 | | - |
| exon-exon | MYO6 | 6 | + | SENP6 | 6 | + |
| exon-exon | NAB2 | 12 | + | TAC3 | | - |
| exon-exon | PTPRK | 6 | - | THEMIS | | - |
| exon-exon | NPAT | | - | RPS11 | 19 | + |
| exon-exon | SLC25A13 | 7 | + | NUS1 | 6 | + |
| exon-exon | PAK4 | 19 | + | AKT2 | 19 | - |
| exon-exon | PAK4 | 19 | + | AKT2 | 19 | - |
| exon-exon | PER3 | 1 | + | CAMTA1 | 1 | - |
| exon-exon | PITPNM2 | 12 | - | ACSS3 | 12 | + |
| exon-exon | PDAP1 | 7 | - | SEL1L2 | 20 | - |
| exon-exon | PLGRKT | 9 | - | HSPBP1 | 19 | - |
| exon-exon | OS9 | 12 | - | PPP1R12A | 12 | + |
| exon-exon | PTPN1 | 20 | + | CHMP4B | 20 | + |
| exon-exon | MTO1 | 6 | + | KCNQ5 | 6 | + |
| exon-exon | PXDC1 | 6 | - | NFS1 | 20 | - |
| exon-exon | RAB3C | | + | CNTN5 | 11 | + |
| exon-exon | R3HDM2 | 12 | + | RDH16 | 12 | - |
| exon-exon | RIMKLB | 12 | + | MICALL2 | 7 | - |
| exon-exon | MACF1 | 1 | + | RPS27A | 2 | + |
| exon-exon | HINT3 | 6 | + | NCOA7 | | + |
| exon-exon | RTN3 | 11 | + | TRPC6 | 11 | - |
| exon-exon | SCMH1 | 1 | - | LIMA1 | 12 | - |
| exon-exon | SCUBE2 | 11 | - | ZNF195 | 11 | + |
| exon-exon | SFMBT1 | 3 | - | CCRL2 | | + |
| exon-exon | SFSWAP | 12 | + | TCP11L2 | | + |
| exon-exon | DPP8 | 15 | - | MEGF11 | 15 | - |
| exon-exon | SLC2A8 | | + | KPNA3 | 13 | - |
| exon-exon | SSPN | 12 | + | GRIN2B | | + |
| exon-exon | CTSD | 11 | - | CMPK1 | 1 | + |
| exon-exon | STAU1 | 20 | - | CABP5 | | - |
| exon-exon | VPS13B | 8 | - | STK3 | 8 | + |
| exon-exon | TFDP2 | 3 | - | LMBRD1 | 6 | - |
| exon-exon | TRMT6 | | - | PLET1 | | - |
| exon-exon | TSFM | 12 | + | R3HDM2 | 12 | - |
| exon-exon | TTC19 | 17 | + | ADORA2B | 17 | + |
| exon-exon | VEZT | 12 | + | CORO1C | 12 | - |
| exon-exon | VHL | 3 | + | BRK1 | 3 | + |
| exon-exon | ZBTB17 | 1 | - | NEB | 2 | + |
| exon-exon | UBAP1 | 9 | + | SP1 | 12 | + |
| exon-exon | ZNF787 | 19 | - | GPR4 | | - |
| exon-exon | ZNF804A | 2 | + | PHLPP1 | | + |
| exon-exon | MID1 | | - | YIPF6 | | + |
| exon-exon | APC | 5 | + | KCNN2 | | + |
| exon-exon | RHBDD3 | 22 | - | D2HGDH | | + |
| exon-exon | TULP3 | 12 | + | LRBA | 4 | - |
| exon-exon | CLTC | 17 | + | RPS6KB1 | 17 | + |
| exon-exon | SDC3 | 1 | - | TAF12 | | - |
| exon-exon | YTHDC1 | 4 | - | TXNL4A | 18 | - |
| exon-exon | NOC4L | 12 | + | FBRSL1 | 12 | + |
| exon-exon | CYFIP2 | 5 | + | PLCG2 | 16 | + |
| exon-exon | WDR45B | 17 | - | RAB40B | 17 | - |
| exon-exon | TTC39C | 18 | + | CABLES1 | 18 | + |
| exon-exon | TOMM40 | 19 | + | CEACAM19 | 19 | + |
| exon-exon | PDCD6 | | + | CCDC127 | | - |
| exon-exon | PAWR | | - | ASTN2 | 9 | - |
| exon-exon | LAMA3 | 18 | + | CARM1 | 19 | + |
| exon-exon | CEP70 | 3 | - | PIK3CB | 3 | - |
| exon-exon | SLC25A36 | | + | IFRD1 | 7 | + |
| exon-exon | RNF43 | 17 | - | HSF5 | | - |
| exon-exon | PAWR | | - | PPP1R12A | 12 | - |
| exon-exon | MUC13 | 3 | - | HEG1 | 3 | - |
| exon-exon | MAP2K6 | | + | SLC12A2 | 5 | + |
| exon-exon | KIAA1958 | 9 | + | SNX30 | | + |
| exon-exon | IFRD2 | 3 | - | RNF123 | 3 | + |
| exon-exon | DMPK | 19 | - | RSPH6A | | - |
| exon-exon | ACTN4 | 19 | + | HNRNPL | 19 | - |
| exon-exon | CCDC34 | 11 | - | LGR4 | 11 | - |
| exon-exon | RABL6 | 9 | + | TMEM141 | | + |
| exon-exon | UBR4 | 1 | - | CAPZB | 1 | - |
| exon-exon | SMURF2 | 17 | - | SAE1 | 19 | + |
| exon-exon | RNASEH2A | | + | GET3 | 19 | + |
| exon-exon | MRPS25 | 3 | - | CD46 | 1 | + |
| exon-exon | RCN2 | 15 | + | NSD2 | 4 | + |
| exon-exon | NAA15 | 4 | + | FAM241A | | + |
| exon-exon | USP4 | 3 | - | RHOA | 3 | - |
| exon-exon | PTP4A2 | 1 | - | CLDN16 | 3 | + |
| exon-exon | ELP4 | 11 | + | DNAJC24 | 11 | + |
| exon-exon | BCAM | 19 | + | H19 | 11 | - |
| exon-exon | ZNF426 | 19 | - | VWA3A | | + |
| exon-exon | RYK | | - | UPK1B | 3 | + |
| exon-exon | MIRLET7BHG | | + | SHISA2 | | - |
| exon-exon | USP31 | 16 | - | SRL | 16 | - |
| exon-exon | SIPA1L3 | 19 | + | ZNF527 | | + |
| exon-exon | MLLT6 | 17 | + | PLXDC1 | 17 | - |
| exon-exon | UBE4B | 1 | + | TBCB | 19 | + |
| exon-exon | DCAF12 | | - | DENND4C | | + |
| exon-exon | FAM172A | 5 | - | NR2F1-AS1 | 5 | - |
| exon-exon | EXT1 | 8 | - | SAMD12 | 8 | - |
| exon-exon | DSTYK | 1 | - | NUAK2 | | - |
| exon-exon | PSEN1 | 14 | + | RBM25 | 14 | + |
| exon-exon | PCMTD1 | 8 | - | PXDNL | | - |
| exon-exon | CILK1 | 6 | - | TUBB | 6 | + |
| exon-exon | TUT1 | 11 | - | SZT2 | 1 | + |
| exon-exon | CACUL1 | 10 | - | VTI1A | 10 | + |
| exon-exon | FMNL2 | 2 | + | GALNT13 | 2 | + |
| exon-exon | CCSER1 | 4 | + | MMRN1 | | + |
| exon-exon | PTBP1 | 19 | + | RNF126 | 19 | - |
| exon-exon | ACVR1B | | + | TAMALIN | | + |
| exon-exon | BAZ1B | 7 | - | MLXIPL | 7 | - |
| exon-exon | TTYH3 | 7 | + | MAD1L1 | 7 | - |
| exon-exon | UBAC1 | 9 | - | SHANK2 | 11 | - |
| exon-exon | DGUOK | 2 | + | ACTG2 | 2 | + |
| exon-exon | SERPINA1 | 14 | - | GAPDH | 12 | + |
| exon-exon | TRIT1 | | - | EP400 | 12 | + |
| exon-exon | PLXNB2 | 22 | - | SCO2 | 22 | - |
| exon-exon | OAZ1 | 19 | + | RNF126 | 19 | - |
| exon-exon | KMT5B | 11 | - | CATSPER1 | | - |
| exon-exon | IGFBP2 | 2 | + | HP | 16 | + |
| exon-exon | ACTB | 7 | - | ALB | 4 | + |
| exon-exon | ACTB | 7 | - | ALB | 4 | + |
| exon-exon | ACTB | 7 | - | ALB | 4 | + |
| exon-exon | RBP4 | 10 | - | FGB | 4 | + |
| exon-exon | FTL | 19 | + | CLU | 8 | - |
| exon-exon | SAMD11 | 1 | + | NOC4L | 12 | + |
| exon-exon | PTBP1 | 19 | + | RNF126 | 19 | - |
| exon-exon | OAZ1 | 19 | + | BTBD2 | 19 | - |
| exon-exon | N4BP2L1 | 13 | - | HMGB1 | 13 | - |
| exon-exon | RLF | 1 | + | C1QTNF12 | | - |
| exon-exon | CXCR4 | 2 | - | UBXN4 | 2 | + |
| exon-exon | NECTIN4 | | - | PFDN2 | 1 | - |
| exon-exon | RLF | 1 | + | CAP1 | 1 | + |
| exon-exon | MECOM | 3 | - | LRRC34 | | - |
| exon-exon | MACF1 | 1 | + | AKIRIN1 | 1 | + |
| exon-exon | SEMA4B | 15 | + | IDH2-DT | | + |
| exon-exon | PCBP2 | 12 | + | LINC00592 | 12 | + |
| exon-exon | ZC3H7A | 16 | - | BCAR4 | | - |
| exon-exon | FTH1 | 11 | - | RAB1A | 2 | - |
| exon-exon | RABGAP1L | 1 | + | CACYBP | 1 | + |
| exon-exon | UBA2 | 19 | + | GPI | 19 | + |
| exon-exon | STK3 | 8 | - | NIPAL2 | 8 | - |
| exon-exon | FRMD6 | 14 | + | LINC00640 | | + |
| exon-exon | RPRD2 | 1 | + | PRPF3 | 1 | + |
| exon-exon | MYH9 | 22 | - | TXN2 | 22 | - |
| exon-exon | APOC3 | 11 | + | ORM1 | 9 | + |
| exon-exon | NCLN | 19 | + | GNA11 | 19 | + |
| exon-exon | PGAM5 | 12 | + | EP400 | 12 | + |
| exon-exon | USP34 | 2 | - | WDPCP | 2 | - |
| exon-exon | ESR1 | 6 | + | CCDC170 | | + |
| exon-exon | STAG1 | 3 | - | MSL2 | 3 | - |
| exon-exon | ESR1 | 6 | + | AKAP12 | 6 | + |
| exon-exon | PCSK2 | 20 | + | CHCHD3 | 7 | - |
| exon-exon | EXOC4 | 7 | + | LRGUK | | + |
| exon-exon | PSMD12 | | - | PITPNC1 | 17 | + |
| exon-exon | FTL | 19 | + | CLU | 8 | - |
| exon-exon | SEC61G | | - | EGFR | 7 | + |
| exon-exon | KSR2 | 12 | - | TAOK3 | 12 | - |
| exon-exon | DOK7 | 4 | + | TFRC | 3 | - |
| exon-exon | PANK4 | | - | NOC4L | 12 | + |
| exon-exon | ANKRD17 | 4 | - | SHROOM3-AS1 | 4 | - |
| exon-exon | RHBDD1 | | + | LINC01934 | | + |
| exon-exon | TMTC1 | 12 | - | SPPL3 | 12 | - |
| exon-exon | TMEM38A | 19 | + | CHERP | | - |
| exon-exon | NOC4L | 12 | + | FBRSL1 | 12 | + |
| exon-exon | FAM168A | | - | RAB6A | 11 | - |
| exon-exon | TMEM50B | 21 | - | RUNX1 | 21 | - |
| exon-exon | SAMD12 | 8 | - | MAL2-AS1 | | - |
| exon-exon | PDE4D | 5 | - | ERCC8 | | - |
| exon-exon | KDM2A | 11 | + | C11orf80 | 11 | + |
| exon-exon | C18orf25 | 18 | + | ZNF407 | 18 | + |
| exon-exon | AKAP10 | 17 | - | HELZ | 17 | - |
| exon-exon | SH3BP2 | 4 | + | ATP8A1 | | - |
| exon-exon | FBRSL1 | 12 | + | ZMPSTE24 | | + |
| exon-exon | CAPNS1 | 19 | + | MAG | 19 | + |
| exon-exon | CEP295 | 11 | + | PPDPFL | | + |
| exon-exon | KMT2E | 7 | + | LHFPL3 | 7 | + |
| exon-exon | MRPS5 | 2 | - | TACR1 | | - |
| exon-exon | FBRSL1 | 12 | + | EP400 | 12 | + |
| exon-exon | ACO2 | 22 | + | CACNG2 | | - |
| exon-exon | FOXP1 | 3 | - | PTPRD | 9 | - |
| exon-exon | PPP1R16B | | + | CTNNBL1 | 20 | + |
| exon-exon | GON4L | 1 | - | ARHGEF2 | 1 | - |
| exon-exon | ENOX1 | | - | TSC22D1 | 13 | - |
| exon-exon | CBFA2T2 | | + | CAMP | | + |
| exon-exon | FBRSL1 | 12 | + | COL9A2 | | - |
| exon-exon | GRIK5 | 19 | - | ZNF829 | 19 | - |
| exon-exon | ZNF208 | | - | MZF1 | | - |
| exon-exon | TNFRSF12A | 16 | + | LINC00514 | | + |
| exon-exon | ADGRA3 | | - | KCNIP4 | 4 | - |
| exon-exon | TRAP1 | | - | LINC01801 | | - |
| exon-exon | WDFY2 | | + | INTS6-AS1 | | + |
| exon-exon | NOL4L | 20 | - | COMMD7 | | - |
| exon-exon | AGRN | 1 | + | NOC4L | 12 | + |
| exon-exon | NOL4L | 20 | - | CDK5RAP1 | 20 | - |
| exon-exon | ERBIN | 5 | + | LINC02055 | 8 | + |
| exon-exon | MTMR3 | 22 | + | LINC01589 | | - |
| exon-exon | SRGAP1 | 12 | + | USP15 | 12 | + |
| exon-exon | BBOX1 | 11 | + | ANO3 | 11 | + |
| exon-exon | NCL | 2 | - | PTMAP2 | 5 | + |
| exon-exon | LLGL2 | 17 | + | RAI1-AS1 | | - |
| exon-exon | TBC1D22A | 22 | + | GRAMD4 | | + |
| exon-exon | MAP2K4 | 17 | + | NBDY | X | + |
| exon-exon | TMOD3 | 15 | + | BCL2L10 | | - |
| exon-exon | AFTPH | | + | C1D | 2 | - |
| exon-exon | SHLD2 | 10 | + | FAM167A-AS1 | 8 | + |
| exon-exon | CSNK2A1 | 20 | - | SLC52A3 | | - |
| exon-exon | AP1M2 | 19 | - | CELF5 | 19 | + |
| exon-exon | UBE2G1 | 17 | - | ZZEF1 | 17 | - |
| exon-exon | GK5 | 3 | - | XRN1 | 3 | - |
| exon-exon | NDUFC2-KCTD14 | 11 | - | KHDC1 | 6 | - |
| exon-exon | NAT10 | 11 | + | C17orf98 | | - |
| exon-exon | FAM171A1 | 10 | - | LINC02105 | | - |
| exon-exon | ALG8 | | - | KHDC1 | 6 | - |
| exon-exon | PYM1 | 12 | - | CS | 12 | - |
| exon-exon | KCNJ6 | | - | ARHGEF26 | | + |
| exon-exon | TNS3 | 7 | - | SPATA48 | | + |
| exon-exon | BCAT1 | 12 | - | TSPAN11 | 12 | + |
| exon-exon | TYMS | 18 | + | MORF4L1 | 15 | + |
| exon-exon | ACO2 | 22 | + | ZC3H7B | 22 | + |
| exon-exon | PTP4A2 | 1 | - | LINC02002 | | - |
| exon-exon | PEAK1 | 15 | - | LINGO1 | | - |
| exon-exon | ADIPOR2 | 12 | + | ERC1 | 12 | + |
| exon-exon | XPR1 | 1 | + | OVAAL | | + |
| exon-exon | IP6K1 | 3 | - | ECSIT | 19 | - |
| exon-exon | SLC38A2 | 12 | - | KCNV1 | | - |
| exon-exon | PPA1 | 10 | - | LRRC20 | | - |
| exon-exon | SORT1 | 1 | - | PSMA5 | | - |
| exon-exon | COL14A1 | 8 | + | DEPTOR | 8 | + |
| exon-exon | KLHL14 | | - | MARK2 | 11 | + |
| exon-exon | SLAMF7 | | + | CCSAP | | - |
| exon-exon | FBRS | 16 | + | AHSP | | + |
| exon-exon | UVRAG | 11 | + | MOGAT2 | | + |
| exon-exon | RAB7A | 3 | + | EEFSEC | 3 | + |
| exon-exon | POLE | 12 | - | ANKLE2 | 12 | - |
| exon-exon | ABHD2 | 15 | + | LOC102724566 | | + |
| exon-exon | XYLB | | + | OXSR1 | 3 | + |
| exon-exon | IKBIP | | - | ANKS1B | 12 | - |
| exon-exon | XPR1 | 1 | + | OVAAL | | + |
| exon-exon | DCAF4 | | + | RGS6 | 14 | + |
| exon-exon | PPP2R5D | 6 | + | MEP1A | | + |
| exon-exon | MEP1A | | + | BAG6 | 6 | - |
| exon-exon | RIOK3 | 18 | + | OSBPL1A | 18 | - |
| exon-exon | ZFHX3 | 16 | - | BCAR1 | 16 | - |
| exon-exon | C6orf132 | | - | LINC00243 | | - |
| exon-exon | TMEM209 | 7 | - | COPG2 | 7 | - |
| exon-exon | PTPRF | 1 | + | LINC02380 | | + |
| exon-exon | NUMB | 14 | - | HEATR4 | 14 | - |
| exon-exon | C19orf12 | | - | ADK | 10 | + |
| exon-exon | TBCD | 17 | + | SCARA5 | | - |
| exon-exon | BRD4 | 19 | - | WDR83 | 19 | + |
| exon-exon | TMTC2 | 12 | + | METTL25 | | + |
| exon-exon | ITPRIP | 10 | - | LOC105377935 | 6 | + |
| exon-exon | CDK5RAP3 | 17 | + | KPNB1 | 17 | + |
| exon-exon | RPTOR | 17 | + | SLC38A10 | 17 | - |
| exon-exon | PSAT1 | 9 | + | CEP78 | | + |
| exon-exon | KMT2E | 7 | + | LHFPL3 | 7 | + |
| exon-exon | IQCK | 16 | + | VPS35L | 16 | + |
| exon-exon | NUP42 | 7 | + | HMGCS1 | 5 | - |
| exon-exon | ANKRD27 | 19 | - | LOC105372368 | | - |
| exon-exon | GATA4 | 8 | + | ERI1 | 8 | + |
| exon-exon | ITPR2 | 12 | - | GTF3C2 | 2 | - |
| exon-exon | DCAF12 | | - | SPAAR | | + |
| exon-exon | SCD5 | | - | SEC31A | 4 | - |
| exon-exon | ST14 | 11 | + | APLP2 | 11 | + |
| exon-exon | MFSD6 | | + | INPP1 | 2 | + |
| exon-exon | C16orf70 | 16 | + | PDP2 | | + |
| exon-exon | SMCHD1 | | + | DLGAP1 | 18 | - |
| exon-exon | ING3 | 7 | + | CHMP1A | 16 | - |
| exon-exon | MIB1 | | + | SMCHD1 | 18 | + |
| exon-exon | GPATCH3 | | - | SPNS2 | 17 | + |
| exon-exon | USP20 | | + | LINC00963 | 9 | + |
| exon-exon | LARS1 | 5 | - | CDKL3 | 5 | - |
| exon-exon | DAGLA | 11 | + | LOC101927495 | | + |
| exon-exon | AAK1 | 2 | - | PDE11A-AS1 | | + |
| exon-exon | ZNF362 | 1 | + | LOC101927979 | | + |
| exon-exon | STK3 | 8 | - | NIPAL2 | 8 | - |
| exon-exon | HPS1 | 10 | - | CHMP1A | 16 | - |
| exon-exon | SKI | 1 | + | FAF1 | 1 | - |
| exon-exon | PUM1 | 1 | - | KANSL1 | 17 | - |
| exon-exon | PSMD4 | 1 | + | S100A10 | 1 | - |
| exon-exon | NIPBL | | + | WDR70 | 5 | + |
| exon-exon | IREB2 | 15 | + | WDR93 | 15 | + |
| exon-exon | FAF1 | 1 | - | SKI | 1 | + |
| exon-exon | ERMP1 | 9 | - | KIAA2026 | 9 | - |
| exon-exon | ARHGEF12 | 11 | + | POU2F3 | | + |
| exon-exon | HNRNPA2B1 | 7 | - | H2AZ2 | 7 | - |
| exon-exon | ACTN1 | 14 | - | RNF41 | 12 | - |
| exon-exon | ERBB2 | 17 | + | JUP | 17 | - |
| exon-exon | AATF | 17 | + | UBE2G1 | 17 | - |
| exon-exon | PFKFB2 | 1 | + | TMEM259 | 19 | - |
| exon-exon | TRA2A | 7 | - | TYW1 | 7 | + |
| exon-exon | TET3 | 2 | + | FAM180A | | - |
| exon-exon | GCAT | | + | EML2 | | - |
| exon-exon | DIS3L2 | 2 | + | AGAP1 | 2 | + |
| exon-exon | C19orf38 | 19 | + | DNM2 | 19 | + |
| exon-exon | KMT5B | 11 | - | LOC105369362 | | + |
| exon-exon | PTK2 | 8 | - | TRAPPC9 | 8 | - |
| exon-exon | HMGN2 | 1 | + | SMPDL3B | | + |
| exon-exon | ERBB2 | 17 | + | STARD3 | 17 | + |
| exon-exon | CPD | 17 | + | AATF | 17 | + |
| exon-exon | EWSR1 | 22 | + | CREM | 10 | + |
| exon-exon | FBXL20 | 17 | - | CDK12 | 17 | + |
| exon-exon | SMS | X | + | CNKSR2 | X | + |
| exon-exon | POLR1C | | + | C6orf226 | | - |
| exon-exon | DDX17 | 22 | - | ATXN10 | | + |
| exon-exon | PHACTR2 | 6 | + | PEX3 | | + |
| exon-exon | NTN4 | | - | LOC105369921 | | - |
| exon-exon | NID1 | 1 | - | HEATR1 | 1 | - |
| exon-exon | CRTC1 | 19 | + | SSBP4 | | + |
| exon-exon | ASAP2 | 2 | + | LOC105373414 | | + |
| exon-exon | ITGA9-AS1 | 3 | - | ACAA1 | 3 | - |
| exon-exon | CMIP | 16 | + | COTL1 | 16 | - |
| exon-exon | TNKS2 | 10 | + | FAM107B | 10 | - |
| exon-exon | TBC1D14 | 4 | + | KIAA0232 | 4 | + |
| exon-exon | TANC1 | 2 | + | WDR75 | 2 | + |
| exon-exon | MCCC1 | 3 | - | KLHL6 | | - |
| exon-exon | HCG18 | 6 | - | COL12A1 | 6 | - |
| exon-exon | ASH1L | 1 | - | GON4L | 1 | - |
| exon-exon | BICD1 | 12 | + | KMT2C | 7 | - |
| exon-exon | FZD4-DT | | + | PPP6R3 | 11 | + |
| exon-exon | RNF121 | 11 | + | PXDNL | | - |
| exon-exon | FAM168A | | - | RNF121 | | + |
| exon-exon | RNF213-AS1 | 17 | - | ARHGDIA | 17 | - |
| exon-exon | FUS | 16 | + | MMP2-AS1 | 16 | - |
| exon-exon | SARNP | 12 | - | MMP19 | | - |
| exon-exon | PARD6B | | + | RIPOR3-AS1 | | + |
| exon-exon | AMDHD2 | | + | ATP6V0C | 16 | + |
| exon-exon | WDR47 | 1 | - | PPFIA2-AS1 | 12 | + |
| exon-exon | USP6NL | 10 | - | LOC105376425 | | + |
| exon-exon | TAX1BP1 | 7 | + | SYT1 | 12 | + |
| exon-exon | PRANCR | 12 | - | SMC2 | 9 | + |
| exon-exon | RNF216 | 7 | - | ABCB5 | | + |
| exon-exon | DGKB | | - | ZFAND6 | 15 | + |
| exon-exon | PIK3CA | | + | LOC105374258 | | - |
| exon-exon | MB21D2 | 3 | - | CTLA4 | | + |
| exon-exon | GNS | 12 | - | LOC100130268 | | + |
| exon-exon | FRS2 | 12 | + | TMTC2 | 12 | + |
| exon-exon | E2F7 | 12 | - | LINC02424 | | - |
| exon-exon | ABI1 | 10 | - | IRAK3 | 12 | + |
| exon-exon | DNM2 | 19 | + | GDF15 | | + |
| exon-exon | LINC01951 | | - | SKAP2 | 7 | - |
| exon-exon | CPSF6 | 12 | + | MYRFL | 12 | + |
| exon-exon | CNOT2 | 12 | + | STK10 | 5 | - |
| exon-exon | CNOT2 | 12 | + | SKAP2 | 7 | - |
| exon-exon | CNOT2 | 12 | + | GPR50 | | + |
| exon-exon | CNOT2 | 12 | + | ADH7 | | - |
| exon-exon | CNOT2 | 12 | + | ACP6 | | - |
| exon-exon | ZNF341 | 20 | + | TTLL9 | 20 | + |
| exon-exon | C12orf66 | 12 | - | CPM | 12 | - |
| exon-exon | ANO6 | 12 | + | MSRB3 | 12 | + |
| exon-exon | ANO4 | | + | C12orf66 | 12 | - |
| exon-exon | PID1 | 2 | - | MRPS6 | | + |
| exon-exon | DYRK2 | 12 | + | CNTN2 | 1 | + |
| exon-exon | SOS1 | 2 | - | LOC439933 | | + |
| exon-exon | SH2B3 | 12 | + | ATXN2 | 12 | - |
| exon-exon | AAMP | | - | ARPC2 | 2 | + |
| exon-exon | VCL | 10 | + | ADK | 10 | + |
| exon-exon | PTPRR | | - | LINC02410 | | + |
| exon-exon | CSRP2 | | - | PTPRR | | - |
| exon-exon | ZHX2 | 8 | + | GPRC6A | | - |
| exon-exon | LAMA5 | 20 | - | AGPAT3 | 21 | + |
| exon-exon | YEATS4 | | + | CFAP54 | 12 | + |
| exon-exon | WWP1 | | + | UTP23 | 8 | + |
| exon-exon | VEZT | 12 | + | C12orf29 | | + |
| exon-exon | TTC28 | 22 | - | TEF | | + |
| exon-exon | TMTC3 | 12 | + | LINC02401 | | + |
| exon-exon | PTCH1 | 9 | - | GAS1RR | | + |
| exon-exon | FRS2 | 12 | + | CFAP54 | 12 | + |
| exon-exon | NIBAN2 | 9 | - | VPS35L | 16 | + |
| exon-exon | CTDSP2 | 12 | - | LINC02458 | 12 | - |
| exon-exon | CAPS2 | | - | LINC02823 | | + |
| exon-exon | WDFY2 | | + | DLGAP2-AS1 | | - |
| exon-exon | ANO2 | 12 | - | KLRK1-AS1 | 12 | + |
| exon-exon | OS9 | 12 | + | LOC105369804 | | - |
| exon-exon | CS | 12 | - | LOC105369804 | | - |
| exon-exon | CPM | 12 | - | XPOT | 12 | + |
| exon-exon | ZDHHC13 | | + | MGAT4C | 12 | - |
| exon-exon | RIC8B | 12 | + | LINC01533 | | + |
| exon-exon | FAR1 | | + | SLC66A1L | | + |
| exon-exon | DNAJC24 | | + | IMMP1L | 11 | - |
| exon-exon | CLEC16A | 16 | + | TM7SF3 | 12 | - |
| exon-exon | CD81-AS1 | | - | CARS1 | 11 | - |
| exon-exon | TSC1 | 9 | - | LINC02403 | | + |
| exon-exon | SLC35E3 | 12 | + | NUP107 | 12 | + |
| exon-exon | KMT5A | 12 | + | ARHGEF25 | | + |
| exon-exon | KCCAT198 | 12 | - | CPM | 12 | - |
| exon-exon | NCOR2 | 12 | - | NUP37 | 12 | - |
| exon-exon | NCOA6 | 20 | - | LSM1 | 8 | - |
| exon-exon | SPAG9 | 17 | - | VIM | 10 | + |
| exon-exon | LINC00963 | 9 | + | STXBP1 | 9 | + |
| exon-exon | FRS2 | 12 | + | SBNO1 | 12 | - |
| exon-exon | COPZ1 | 12 | + | GNPTAB | 12 | - |
| exon-exon | CHCHD3 | 7 | - | CSMD1 | 8 | - |
| exon-exon | GREB1L | 18 | + | TULP3 | 12 | + |
| exon-exon | CEP85L | 6 | - | JAK2 | 9 | + |
| exon-exon | CCDC92 | 12 | - | MAN1A1 | 6 | - |
| exon-exon | APPL2 | 12 | - | MYBPC1 | 12 | + |
| exon-exon | APPL2 | 12 | - | MAN1A1 | 6 | - |
| exon-exon | ANAPC5 | 12 | - | LTA4H | 12 | - |
| exon-exon | MEX3D | | - | DAZAP1 | 19 | + |
| exon-exon | AXL | 19 | + | LOC102724421 | | - |
| exon-exon | SUCO | 1 | + | C12orf42 | 12 | - |
| exon-exon | GNB1L | | - | SEPT5-GP1BB | 22 | + |
| exon-exon | LOC283387 | | - | METTL25 | | + |
| exon-exon | MAGI3 | 1 | + | MROH3P | | + |
| exon-exon | CPSF6 | 12 | + | PRANCR | 12 | - |
| exon-exon | CPSF6 | 12 | + | DNM3OS | | - |
| exon-exon | C21orf91 | | - | COLGALT2 | 1 | - |
| exon-exon | WTIP | | + | GPI | 19 | + |
| exon-exon | TRAF3 | | + | GIHCG | 12 | - |
| exon-exon | TMTC3 | 12 | + | CEP290 | 12 | - |
| exon-exon | TBC1D15 | 12 | + | LYZ | 12 | + |
| exon-exon | SARNP | 12 | - | NT5DC3 | | - |
| exon-exon | PRANCR | 12 | - | NUP107 | 12 | + |
| exon-exon | TATDN1 | | - | MTSS1 | 8 | - |
| exon-exon | CDH12 | 5 | - | LINC02823 | | + |
| exon-exon | EEF1AKMT3 | 12 | + | LINC02444 | | + |
| exon-exon | UHRF1 | | + | PEX11G | | - |
| exon-exon | TBC1D30 | | + | SYT1 | 12 | + |
| exon-exon | SUCO | 1 | + | LOC100506869 | | + |
| exon-exon | SUCO | 1 | + | CDH18 | | - |
| exon-exon | TMEM120B | | + | CFAP251 | 12 | + |
| exon-exon | PSMA3 | 14 | + | ACTR10 | 14 | + |
| exon-exon | NUP155 | | - | LINC02410 | | + |
| exon-exon | FRS2 | 12 | + | LOC100506869 | | + |
| exon-exon | DNM3 | | + | UHRF1 | | + |
| exon-exon | DBN1 | 5 | - | PTMS | 12 | + |
| exon-exon | TGFBR2 | 3 | + | XPC | 3 | - |
| exon-exon | SLC38A10 | 17 | - | TMEM207 | | - |
| exon-exon | INTS9 | 8 | - | LOC105374724 | | - |
| exon-exon | C16orf74 | 16 | - | ICMT | 1 | - |
| exon-exon | CNOT2 | 12 | + | TAFA2 | | - |
| exon-exon | C1orf21 | 1 | + | INTS7 | 1 | - |
| exon-exon | PTPN11 | 12 | + | DIP2B | 12 | + |
| exon-exon | ACIN1 | 14 | - | EFS | | - |
| exon-exon | FAM189A1 | | - | FBN1 | 15 | - |
| exon-exon | UEVLD | 11 | - | PRMT3 | 11 | + |
| exon-exon | RALGPS2 | 1 | + | LINC02444 | | + |
| exon-exon | R3HDM2 | 12 | - | RAP1B | 12 | + |
| exon-exon | PARVA | 11 | + | OR51B5 | 11 | - |
| exon-exon | MICAL2 | 11 | + | NELL1 | 11 | + |
| exon-exon | UTP6 | 17 | - | CDC6 | 17 | + |
| exon-exon | MDM1 | | - | RAP1B | 12 | + |
| exon-exon | HMGA2 | 12 | + | LINC02384 | 12 | - |
| exon-exon | ASPM | | - | LOC100507065 | | - |
| exon-exon | C3orf52 | 3 | + | ZBED2 | | - |
| exon-exon | AARS2 | 6 | - | MYMX | | + |
| exon-exon | FAM83H | | - | CYHR1 | 8 | - |
| exon-exon | TPRN | | - | EXD3 | 9 | - |
| exon-exon | LRSAM1 | | + | SH2D3C | 9 | - |
| exon-exon | RHOH | | + | BCL6 | 3 | - |
| exon-exon | H2BC12 | 6 | - | F13A1 | 6 | - |
| exon-exon | FOXP1 | 3 | - | ZNF860 | | + |
| exon-exon | TES | 7 | + | CAV1 | 7 | + |
| exon-exon | PLXNB2 | 22 | - | SCO2 | 22 | - |
| exon-exon | PDE7A | 8 | - | VXN | 8 | + |
| exon-exon | PDE7A | 8 | - | ADHFE1 | 8 | + |
| exon-exon | TRIP12 | 2 | - | SLC16A14 | 2 | - |
| exon-exon | DNAJC3 | 13 | + | CLDN10 | 13 | + |
| exon-exon | SP110 | 2 | - | FBXO36 | 2 | + |
| exon-exon | TTF2 | 1 | + | LINC01933 | 5 | + |
| exon-exon | EVI5 | 1 | - | FUBP1 | 1 | - |
| exon-exon | POLE | 12 | - | ANKLE2 | 12 | - |
| exon-exon | OAZ1 | 19 | + | DAZAP1 | 19 | + |
| exon-exon | SDHC | 1 | + | NDUFS2 | 1 | + |
| exon-exon | GALNT7 | | + | LINC02504 | | - |
| exon-exon | NPHP4 | 1 | - | FGGY | 1 | + |
| exon-exon | PRPF18 | 10 | + | MCM10 | | + |
| exon-exon | ABCD3 | 1 | + | GAP43 | 3 | + |
| exon-exon | CAT | 11 | + | POLDIP3 | 22 | - |
| exon-exon | MTAP | 9 | + | SMU1 | | - |
| exon-exon | CD70 | | - | RFX2 | 19 | - |
| exon-exon | RALGPS1 | 9 | + | ENG | 9 | - |
| exon-exon | PNN | 14 | + | GEMIN2 | 14 | + |
| exon-exon | BCL6 | 3 | - | RAB29 | 1 | - |
| exon-exon | MED8 | 1 | - | ELOVL1 | 1 | - |
| exon-exon | CDK13 | 7 | + | LINC00265 | 7 | + |
| exon-exon | LYPD6B | 2 | + | MBD5 | 2 | + |
| exon-exon | OGDH | 7 | + | AMPH | 7 | - |
| exon-exon | CTDSPL | 3 | + | CPS1 | | + |
| exon-exon | TRAPPC9 | 8 | - | ASAP1 | 8 | - |
| exon-exon | THRAP3 | 1 | + | MAP7D1 | 1 | + |
| exon-exon | MYOF | 10 | - | C10orf90 | | - |
| exon-exon | IKZF4 | 12 | + | DGKA | 12 | + |
| exon-exon | STK3 | 8 | - | VPS13B-DT | | - |
| exon-exon | IL17RC | | + | ARPC4-TTLL3 | 3 | + |
| exon-exon | TCEA3 | 1 | - | WDHD1 | 14 | - |
| exon-exon | STK40 | 1 | - | GPHN | 14 | + |
| exon-exon | CFAP74 | 1 | - | NUMB | 14 | - |
| exon-exon | AGTRAP | 1 | + | DHRS7 | 14 | - |
| exon-exon | IL32 | 16 | + | TNFRSF12A | 16 | + |
| exon-exon | DIXDC1 | 11 | + | HSPB2-C11orf52 | 11 | + |
| exon-exon | ARIH2 | 3 | + | TMA7 | 3 | + |
| exon-exon | AFM | | + | ALB | 4 | + |
| exon-exon | LOC101927851 | | - | SIK3 | 11 | - |
| exon-exon | HSPA4L | 4 | + | SLC25A31 | 4 | + |
| exon-exon | USP46 | 4 | - | PCDH7 | | + |
| exon-exon | AOPEP | 9 | + | ZNF169 | 9 | + |
| exon-exon | TTC39C | 18 | + | LAMA3 | 18 | + |
| exon-exon | AFM | | + | ALB | 4 | + |
| exon-exon | FNDC3B | 3 | + | LINC01991 | | - |
| exon-exon | ATF6 | 1 | + | LINC00467 | | + |
| exon-exon | KATNB1 | | + | DRC7 | 16 | + |
| exon-exon | FAM126A | 7 | - | HIBADH | | - |
| exon-exon | ST3GAL1 | 8 | - | TDRP | | - |
| exon-exon | MALAT1 | 11 | + | ALB | 4 | + |
| exon-exon | UHRF1BP1L | 12 | - | ANO4 | 12 | + |
| exon-exon | LINC02499 | | + | ALB | 4 | + |
| exon-exon | CAPZA2 | | + | TFEC | | - |
| exon-exon | BEST1 | 11 | + | RBP4 | 10 | - |
| exon-exon | AFM | | + | ALB | 4 | + |
| exon-exon | UBE2R2 | 9 | + | TRBV23OR9-2 | | + |
| exon-exon | TTR | 18 | + | HRG | 3 | + |
| exon-exon | TCP11L2 | 12 | + | LOC100507477 | | + |
| exon-exon | LOC100507065 | 12 | - | GNPTAB | 12 | - |
| exon-exon | BIRC6 | 2 | + | YIPF4 | 2 | + |
| exon-exon | CPSF6 | 12 | + | EEA1 | 12 | - |
| exon-exon | AATF | 17 | + | KRT15 | 17 | - |
| exon-exon | ZDHHC20 | 13 | - | CPAMD8 | 19 | - |
| exon-exon | CCDC152 | | + | CYP2E1 | | + |
| exon-exon | TRIT1 | | - | ADH1C | 4 | - |
| exon-exon | HLTF | 3 | - | WWTR1 | 3 | - |
| exon-exon | C16orf70 | 16 | + | GNAO1 | 16 | + |
| exon-exon | LOC101927418 | | - | KLHL28 | 14 | - |
| exon-exon | RALGAPB | | + | LBP | | + |
| exon-exon | PTMS | 12 | + | FAM177A1 | 14 | + |
| exon-exon | ZNF148 | 3 | - | LYPLA2 | 1 | + |
| exon-exon | SFI1 | 22 | + | ZNRF3 | 22 | + |
| exon-exon | MYLK | 3 | - | TM7SF2 | 11 | + |
| exon-exon | ZNRF3 | | + | SFI1 | 22 | + |
| exon-exon | PLEKHG4B | | + | ADCY2 | 5 | + |
| exon-exon | PTK2 | 8 | - | TRAPPC9 | 8 | - |
| exon-exon | C1orf174 | 1 | - | RAD18 | 3 | - |
| exon-exon | GPC4 | X | - | GPC3 | X | - |
| exon-exon | PTBP1 | 19 | + | RNF126 | 19 | - |
| exon-exon | MRPS31P5 | | - | SPRYD7 | | - |
| exon-exon | OAZ1 | 19 | + | CSNK1G2 | 19 | + |
| exon-exon | ARID3B | | + | RBMS1P1 | | - |
| exon-exon | MGAT5 | 2 | + | CXCR4 | 2 | - |
| exon-exon | NKX2-3 | | + | TRDC | 14 | + |
| exon-exon | TTC27 | | + | BIRC6 | 2 | + |
| exon-exon | SEC62 | 3 | + | MECOM | 3 | - |
| exon-exon | RAD54L | 1 | + | LRRC41 | 1 | - |
| exon-exon | ITFG1 | 16 | - | ZNF423 | 16 | - |
| exon-exon | ECT2 | 3 | + | EGFEM1P | | + |
| exon-exon | FOCAD | 9 | + | LINC01239 | 9 | + |
| exon-exon | USP34 | 2 | - | CCT4 | 2 | - |
| exon-exon | ANO1 | 11 | + | LINC02753 | | - |
| exon-exon | COIL | | - | CA4 | | + |
| exon-exon | TCF12 | 15 | + | NCOA3 | 20 | + |
| exon-exon | UBE2L3 | 22 | + | YPEL1 | 22 | - |
| exon-exon | ANKRD13D | 11 | + | FCRL4 | | - |
| exon-exon | PSPC1 | 13 | - | MPHOSPH8 | 13 | + |
| exon-exon | TMEM123 | 11 | - | MMP27 | | - |
| exon-exon | MPZL1 | 1 | + | RCSD1 | 1 | + |
| exon-exon | MACF1 | 1 | + | LOC105378663 | | + |
| exon-exon | MACF1 | 1 | + | DHX58 | | - |
| exon-exon | NET1 | 10 | + | ADARB2-AS1 | | + |
| exon-exon | DNAJA3 | 16 | + | ZDHHC16 | 10 | + |
| exon-exon | BPTF | 17 | + | RNF135 | 17 | + |
| exon-exon | TNFSF10 | 3 | - | LINC02068 | | - |
| exon-exon | RBM45 | | + | LINC01117 | 2 | + |
| exon-exon | CIPC | 14 | + | LRRC74A | | + |
| exon-exon | GATAD2A | 19 | + | UBA52 | 19 | + |
| exon-exon | DDR1 | 6 | + | IER3-AS1 | | + |
| exon-exon | ATG7 | 3 | + | SLC6A1 | 3 | + |
| exon-exon | HEG1 | 3 | - | CLSTN2 | 3 | + |
| exon-exon | FAM102A | 9 | - | PHF19 | 9 | - |
| exon-exon | EXOC4 | 7 | + | PTPRN2 | 7 | - |
| exon-exon | CDYL | 6 | + | EEF1E1-BLOC1S5 | | - |
| exon-exon | ADAMTS17 | 15 | - | AKAP13 | 15 | + |
| exon-exon | FAM104A | 17 | - | EEF1D | 8 | - |
| exon-exon | OTUD4 | | - | CPE | 4 | + |
| exon-exon | ZNF433-AS1 | 19 | + | ATCAY | 19 | + |
| exon-exon | C9orf85 | 9 | + | FXN | 9 | + |
| exon-exon | XPR1 | 1 | + | NCF2 | | - |
| exon-exon | LOC101929295 | 11 | + | DEUP1 | | + |
| exon-exon | SLC66A2 | 18 | - | LINC02864 | 18 | - |
| exon-exon | DLEU2 | 13 | - | LINC00462 | 13 | - |
| exon-exon | TSPAN5 | | - | ADH4 | 4 | - |
| exon-exon | SSH2 | 17 | - | VSIR | 10 | - |
| exon-exon | SUN1 | 7 | + | ABHD16A | 6 | - |
| exon-exon | SMARCD2 | 17 | - | NUFIP2 | 17 | - |
| exon-exon | SH3PXD2A | 10 | - | LINC01435 | | - |
| exon-exon | RBFOX2 | 22 | - | MRTFA | 22 | - |
| exon-exon | RANGAP1 | 22 | - | PBX2 | 6 | - |
| exon-exon | COMMD9 | 11 | - | C11orf91 | 11 | - |
| exon-exon | NF1 | 17 | + | RAB11FIP4 | 17 | + |
| exon-exon | ATG101 | | + | CSRNP2 | 12 | - |
| exon-exon | BMPR2 | 2 | + | CYP20A1 | 2 | + |
| exon-exon | MED27 | 9 | - | TG | 8 | + |
| exon-exon | PEAK1 | 15 | - | LOC105370906 | 15 | + |
| exon-exon | LMAN2 | 5 | - | DOCK2 | 5 | + |
| exon-exon | KIF5C | 2 | + | GALNT13 | 2 | + |
| exon-exon | PGS1 | 17 | + | LOC101928674 | | + |
| exon-exon | DUSP22 | | + | HDHD5 | 22 | - |
| exon-exon | LBR | | - | LINC02765 | | - |
| exon-exon | ILF3 | 19 | + | SLC44A2 | 19 | + |
| exon-exon | ARHGEF1 | 19 | + | RPS19 | 19 | + |
| exon-exon | ZNF618 | 9 | + | PARP4 | 13 | - |
| exon-exon | CEP55 | | + | IVNS1ABP | 1 | - |
| exon-exon | TTC21B | 2 | - | SLC38A11 | | - |
| exon-exon | PRCC | | + | NUGGC | | - |
| exon-exon | KIF3B | 20 | + | ZNF341-AS1 | | - |
| exon-exon | TTC39A | | - | CDC42 | 1 | + |
| exon-exon | EEF1AKNMT | | + | EIF4G3 | 1 | - |
| exon-exon | SNTG1 | 8 | + | CHCHD7 | 8 | + |
| exon-exon | GPD2 | 2 | + | GALNT5 | 2 | + |
| exon-exon | PXMP4 | 20 | - | RBM39 | 20 | - |
| exon-exon | TYMS | 18 | + | SEPTIN9 | 17 | + |
| exon-exon | LCN2 | 9 | + | LMX1B | | + |
| exon-exon | SARNP | 12 | - | KCNN4 | 19 | - |
| exon-exon | KCNK15-AS1 | 20 | - | LOC105374016 | | - |
| exon-exon | ALMS1 | | + | TNC | 9 | - |
| exon-exon | ABTB1 | | + | GRM7-AS3 | | - |
| exon-exon | LOC102723729 | 8 | - | IKBKB | 8 | + |
| exon-exon | REEP5 | 5 | - | MCC | 5 | - |
| exon-exon | LOC105372310 | 19 | - | GAP43 | 3 | + |
| exon-exon | CCDC6 | 10 | - | ANK3 | 10 | - |
| exon-exon | CARM1 | 19 | + | C19orf38 | | + |
| exon-exon | C8orf44-SGK3 | 8 | + | DNAJC5B | | + |
| exon-exon | UNK | 17 | + | ITGB4 | 17 | + |
| exon-exon | ANKRD12 | 18 | + | PTPRM | 18 | + |
| exon-exon | GANAB | 11 | - | SSRP1 | 11 | - |
| exon-exon | PMF1-BGLAP | 1 | + | EEF1D | 8 | - |
| exon-exon | ZNF112 | | - | PLAUR | 19 | - |
| exon-exon | TTC28 | 22 | - | EIF4ENIF1 | 22 | - |
| exon-exon | SCAMP2 | 15 | - | SCAPER | 15 | - |
| exon-exon | PPP2R5C | | + | LINC02314 | | + |
| exon-exon | PEMT | 17 | - | TOM1L2 | 17 | - |
| exon-exon | MTMR3 | 22 | + | THOC5 | 22 | - |
| exon-exon | MRPL24 | 1 | - | ARHGEF11 | 1 | - |
| exon-exon | HBP1 | 7 | + | LHFPL3 | 7 | + |
| exon-exon | IMMT | 2 | - | HSPD1 | 2 | - |
| exon-exon | EXO1 | 1 | + | WDR64 | 1 | + |
| exon-exon | ATF1 | 12 | + | DIP2B | 12 | + |
| exon-exon | LINC01117 | 2 | + | UBXN2A | 2 | + |
| exon-exon | EPB41 | 1 | + | TRNAU1AP | 1 | + |
| exon-exon | STT3A | 11 | + | MIR4300HG | | - |
| exon-exon | FGF23 | | - | LINC02386 | | - |
| exon-exon | CREBBP | 16 | - | LINC01569 | | - |
| exon-exon | PTEN | | + | LOC102724596 | | + |
| exon-exon | SCARB2 | 4 | - | CCDC158 | 4 | - |
| exon-exon | HRH1 | | + | SLC6A11 | | + |
| exon-exon | ARSG | 17 | + | AP2B1 | 17 | + |
| exon-exon | WDPCP | 2 | - | SOCS5 | 2 | + |
| exon-exon | PPM1H | 12 | - | LINC01445 | | + |
| exon-exon | PLCB1 | 20 | + | WDFY3-AS2 | | + |
| exon-exon | PIP5K1B | 9 | + | MAP7D1 | 1 | + |
| exon-exon | NIPBL | | + | WDR70 | 5 | + |
| exon-exon | MAD2L1 | 4 | - | MAPK10 | 4 | - |
| exon-exon | GMPS | 3 | + | SLC66A1L | | + |
| exon-exon | RPA2 | 1 | - | EPB41 | 1 | + |
| exon-exon | ESCO1 | 18 | - | LAMA3 | 18 | + |
| exon-exon | RPN2 | 20 | + | MYL9 | 20 | + |
| exon-exon | KLHL22 | 22 | - | ZNF74 | 22 | + |
| exon-exon | WASF2 | 1 | - | FGR | 1 | - |
| exon-exon | ZMYND8 | 20 | - | LINC01754 | | - |
| exon-exon | PLAA | | - | RUSC2 | 9 | + |
| exon-exon | MFSD2A | 1 | + | PABPC4-AS1 | 1 | + |
| exon-exon | PRPF18 | 10 | + | FDFT1 | 8 | + |
| exon-exon | CDV3 | 3 | + | LINC01213 | | + |
| exon-exon | ARHGEF10L | 1 | + | PADI4 | 1 | + |
| exon-exon | NFX1 | 9 | + | ACO1 | | + |
| exon-exon | ZMYM2 | 13 | + | DMRT2 | | + |
| exon-exon | POFUT1 | 20 | + | TM9SF4 | 20 | + |
| exon-exon | TSPAN18 | 11 | + | LINC02755 | | - |
| exon-exon | PHLPP1 | 18 | + | WDR12 | 2 | - |
| exon-exon | SMPD4BP | 2 | + | RAB27B | 18 | + |
| exon-exon | ZNF335 | 20 | - | NCOA5 | | - |
| exon-exon | PEPD | 19 | - | NME7 | 1 | - |
| exon-exon | NCAPH | 2 | + | KCNIP3 | | + |
| exon-exon | WWTR1 | 3 | - | SOX2-OT | 3 | + |
| exon-exon | CTTN | 11 | + | ANO1 | 11 | + |
| exon-exon | PIK3C2G | 12 | + | SAE1 | 19 | + |
| exon-exon | DIDO1 | 20 | - | RPS4X | X | - |
| exon-exon | WBP2 | 17 | - | UNK | 17 | + |
| exon-exon | CCDC88B | | + | KCNK4-TEX40 | 11 | + |
| exon-exon | SH3PXD2A | 10 | - | STN1 | 10 | - |
| exon-exon | SEMA4B | 15 | + | IDH2-DT | | + |
| exon-exon | MIR4435-2HG | 2 | - | TXNL4A | 18 | - |
| exon-exon | C6orf62 | 6 | - | RIPOR2 | 6 | - |
| exon-exon | GRIP1 | 12 | - | RPSAP52 | | - |
| exon-exon | MYH9 | 22 | - | TXN2 | 22 | - |
| exon-exon | SLC25A13 | 7 | - | CHAMP1 | | + |
| exon-exon | PIK3IP1-DT | 22 | + | LIMK2 | 22 | + |
| exon-exon | CLN6 | 15 | - | INSYN1 | 15 | - |
| exon-exon | PEX14 | 1 | + | KIF1B | 1 | + |
| exon-exon | FDXR | | - | GARNL3 | 9 | + |
| exon-exon | BCR | 22 | + | ABL1 | 9 | + |
| exon-exon | ANKRD12 | 18 | + | PTPRM | 18 | + |
| exon-exon | PDXK | 21 | + | LCA5L | | - |
| exon-exon | LPIN2 | | - | MYOM1 | | - |
| exon-exon | CLPTM1 | 19 | + | AP1M1 | 19 | + |
| exon-exon | ABL1 | 9 | + | BCR | 22 | + |
| exon-exon | PPP2R1B | | - | ALG9 | 11 | - |
| exon-exon | GCC2 | 2 | + | ANXA4 | 2 | + |
| exon-exon | CCSER1 | 4 | + | MMRN1 | | + |
| exon-exon | RAI14 | 5 | + | ASB4 | | + |
| exon-exon | PDE4D | 5 | - | LINC01511 | | - |
| exon-exon | WNK1 | 12 | + | IQSEC3 | | + |
| exon-exon | PTK2 | 8 | - | ZFPM2-AS1 | 8 | - |
| exon-exon | CIC | 19 | + | COQ8B | 19 | - |
| exon-exon | GALNT11 | 7 | + | EZH2 | 7 | - |
| exon-exon | PTBP3 | 9 | - | LOC105376276 | | + |
| exon-exon | DDX19A | 16 | + | ABCC11 | | - |
| exon-exon | CDKAL1 | 6 | + | C6orf89 | 6 | + |
| exon-exon | UNK | 17 | + | C17orf77 | | + |
| exon-exon | KDM2A | 11 | + | ADAM5 | 8 | + |
| exon-exon | CPT1A | 11 | - | PPFIA1 | 11 | + |
| exon-exon | MYLK | 3 | - | PLXND1 | | - |
| exon-exon | DAPK2 | 15 | - | CIAO2A | 15 | - |
| exon-exon | NSF | | + | LOC101927060 | 17 | - |
| exon-exon | MTAP | 9 | + | LINC01239 | 9 | + |
| exon-exon | TANC1 | 2 | + | CRLF1 | | - |
| exon-exon | ZMYND8 | 20 | - | LINC01429 | | - |
| exon-exon | DIS3L2 | 2 | + | SP100 | 2 | + |
| exon-exon | BRD4 | 19 | - | CALR3 | | - |
| exon-exon | AATF | 17 | + | LIG3 | 17 | + |
| exon-exon | NKD1 | | + | LINC02181 | | + |
| exon-exon | SYNRG | 17 | - | EVX1 | 7 | + |
| exon-exon | TC2N | 14 | - | TRIP11 | | - |
| exon-exon | PLEKHA5 | 12 | + | RASGEF1C | | - |
| exon-exon | EIF5 | 14 | + | EVI5 | 1 | - |
| exon-exon | PVR | 19 | + | IGSF23 | 19 | + |
| exon-exon | MAPKAPK5 | 12 | + | ALDH2 | 12 | + |
| exon-exon | ATN1 | 12 | + | ENO2 | 12 | + |
| exon-exon | ZNF385B | 2 | - | CWC22 | | - |
| exon-exon | P4HA1 | 10 | - | ACOXL-AS1 | | - |
| exon-exon | AGAP3 | 7 | + | MKLN1 | 7 | + |
| exon-exon | BICC1 | 10 | + | UBE2D1 | 10 | + |
| exon-exon | PKNOX1 | 21 | + | H2BW2 | | + |
| exon-exon | AGO2 | 8 | - | STRN3 | 14 | - |
| exon-exon | LINC00189 | 21 | + | TENM1 | X | - |
| exon-exon | TSPEAR-AS2 | 21 | + | GABRA3 | X | - |
| exon-exon | TG | 8 | + | THADA | 2 | - |
| exon-exon | FSCN1 | 7 | + | FBXL18 | 7 | - |
| exon-exon | SNHG19 | 16 | - | CSF1R | 5 | - |
| exon-exon | DENND4B | 1 | - | NUP210L | 1 | - |
| exon-exon | LYST | 1 | - | TSNAX-DISC1 | 1 | + |
| exon-exon | GALK2 | 15 | + | TERB2 | | + |
| exon-exon | CUX1 | 7 | + | THSD7A | 7 | - |
| exon-exon | ARNTL | 11 | + | TEAD1 | 11 | + |
| exon-exon | TMEM117 | | + | JADE1 | 4 | + |
| exon-exon | TRIM25 | 17 | - | TRIM37 | 17 | - |
| exon-exon | KCNQ1 | 11 | + | METTL15 | 11 | + |
| exon-exon | RAI1 | 17 | + | PEMT | 17 | - |
| exon-exon | PEMT | 17 | - | RAI1 | 17 | + |
| exon-exon | LTBP3 | 11 | - | CERS3 | 15 | - |
| exon-exon | LYPD1 | 2 | - | NCKAP5 | 2 | - |
| exon-exon | OXR1 | 8 | + | MRPS28 | 8 | - |
| exon-exon | TMEM87B | 2 | + | MERTK | 2 | + |
| exon-exon | ELL | 19 | - | ZNF100 | 19 | - |
| exon-exon | TFDP1 | 13 | + | TMEM255B | 13 | + |
| exon-exon | ZNF460 | 19 | + | C19orf18 | | - |
| exon-exon | MPHOSPH8 | 13 | + | ATP8A2 | | + |
| exon-exon | F3 | 1 | - | SLC44A3-AS1 | 1 | - |
| exon-exon | BDNF | | - | BBOX1-AS1 | 11 | - |
| exon-exon | ZSCAN25 | 7 | + | TPST1 | 7 | + |
| exon-exon | CTTN | 11 | + | LINC02133 | 16 | + |
| exon-exon | RPH3AL | 17 | - | OXTR | | - |
| exon-exon | SPCS2 | | + | SUMO1P3 | | + |
| exon-exon | GTF2I | 7 | + | GTF2IRD1 | | + |
| exon-exon | ANKS1A | 6 | + | UQCC2 | 6 | - |
| exon-exon | DCUN1D1 | 3 | - | CCDC50 | 3 | + |
| exon-exon | NADSYN1 | 11 | + | TRIM9 | 14 | - |
| exon-exon | ZZEF1 | 17 | - | CCDC144A | 17 | + |
| exon-exon | PPHLN1 | 12 | + | TMTC1 | | - |
| exon-exon | LRRC3C | | + | NAT1 | 8 | + |
| exon-exon | KDM4B | 19 | + | UBXN6 | 19 | - |
| exon-exon | DIS3L2 | 2 | + | UBE2E3 | 2 | + |
| exon-exon | SIRLNT | | - | ADAM9 | 8 | + |
| exon-exon | LINC02015 | | + | KCNMB2-AS1 | | - |
| exon-exon | IPO8 | | - | CDH13 | 16 | + |
| exon-exon | PDXDC1 | 16 | + | ICE1 | 5 | + |
| exon-exon | SMAD2 | 18 | - | ZBTB7C | 18 | - |
| exon-exon | CHD9 | 16 | + | SPG7 | 16 | + |
| exon-exon | MTERF3 | | - | LINC01111 | | + |
| exon-exon | IGF2BP2 | | - | NCEH1 | 3 | - |
| exon-exon | ETV6 | 12 | + | YTHDF2 | 1 | + |
| exon-exon | SPPL3 | 12 | - | CD99L2 | X | - |
| exon-exon | MYO9A | 15 | - | GRAMD2A | | - |
| exon-exon | DYNC1LI1 | 3 | - | PXK | 3 | + |
| exon-exon | ABTB2 | 11 | - | KDM2A | 11 | + |
| exon-exon | BPTF | 17 | + | CCDC40 | | + |
| exon-exon | AKAP1 | 17 | + | C17orf67 | | - |
| exon-exon | TC2N | 14 | - | ATXN3 | 14 | - |
| exon-exon | CSAD | | - | ITGB7 | 12 | - |
| exon-exon | SDHD | 11 | + | CUL5 | 11 | + |
| exon-exon | DCP2 | 5 | + | NDUFB2 | 7 | + |
| exon-exon | PCBP2 | 12 | + | LINC00592 | 12 | + |
| exon-exon | GMEB1 | | + | TRNAU1AP | 1 | + |
| exon-exon | ABI2 | 2 | + | CYP20A1 | 2 | + |
| exon-exon | WRAP53 | 17 | + | SLC44A2 | 19 | + |
| exon-exon | WNT5B | 12 | + | ERC1 | 12 | + |
| exon-exon | ARHGAP4 | X | - | RENBP | | - |
| exon-exon | SPOPL | | + | ITPRID2 | 2 | + |
| exon-exon | PITPNM2 | 12 | - | LINC02418 | | - |
| exon-exon | DNAJB6 | 7 | + | UBE3C | 7 | + |
| exon-exon | CFAP410 | 21 | - | ACTG1 | 17 | - |
| exon-exon | ARHGEF2 | 1 | - | SSR2 | 1 | - |
| exon-exon | ATP6V0A1 | 17 | + | ATF6 | 1 | + |
| exon-exon | XPR1 | 1 | + | QSOX1 | 1 | + |
| exon-exon | ACTN4 | 19 | + | VCP | 9 | - |
| exon-exon | WWP1 | | + | CPB2 | | - |
| exon-exon | LINC01992 | | - | PGAP3 | 17 | - |
| exon-exon | RARA | 17 | + | POLDIP2 | 17 | - |
| exon-exon | RARA-AS1 | | - | POLDIP2 | 17 | - |
| exon-exon | WAC | 10 | + | UBAC2 | 13 | + |
| exon-exon | TRAF3IP2-AS1 | 6 | + | SNX3 | 6 | - |
| exon-exon | DYRK1A | 21 | + | ZBTB46 | 20 | - |
| exon-exon | ILK | 11 | + | PABPC1 | 8 | - |
| exon-exon | SMG1 | 16 | - | ANO3 | 11 | + |
| exon-exon | C19orf25 | 19 | - | MED1 | 17 | - |
| exon-exon | RPS3 | 11 | + | TSKU | 11 | + |
| exon-exon | PPFIA1 | 11 | + | HSD3B2 | | + |
| exon-exon | TMEM45B | 11 | + | BARX2 | | + |
| exon-exon | PBXIP1 | 1 | - | LINC01252 | | + |
| exon-exon | CD9 | 12 | + | PBXIP1 | 1 | - |
| exon-exon | TANC2 | 17 | + | WFDC21P | 17 | - |
| exon-exon | GSK3B | 3 | - | LOC105371768 | 17 | + |
| exon-exon | GTF3C6 | | + | RNF40 | | + |
| exon-exon | MIR4300HG | 11 | - | MAP6 | 11 | - |
| exon-exon | CLTC | 17 | + | WFDC21P | 17 | - |
| exon-exon | C17orf75 | | - | TOP2A | 17 | - |
| exon-exon | BCAS3 | 17 | + | RAD51C | 17 | + |
| exon-exon | AXIN1 | 16 | - | FAM234A | 16 | + |
| exon-exon | AKAP1 | 17 | + | WIPF2 | 17 | + |
| exon-exon | SYT12 | 11 | + | C11orf80 | 11 | + |
| exon-exon | C7orf50 | 7 | - | PIP4K2B | 17 | - |
| exon-exon | CSTB | 21 | - | ERGIC1 | 5 | + |
| exon-exon | STT3B | 3 | + | LOC100507291 | | + |
| exon-exon | ARFGEF3 | | + | LINC02539 | | - |
| exon-exon | IPO11 | 5 | + | GJE1 | | + |
| exon-exon | EEF2K | 16 | + | VWA3A | | + |
| exon-exon | CAPZB | 1 | - | OTUD3 | | + |
| exon-exon | ACTR3B | 7 | + | PTPRN2 | 7 | - |
| exon-exon | ACOT7 | 1 | - | KLHL21 | 1 | - |
| exon-exon | CNTLN | 9 | + | ADAMTSL1 | 9 | + |
| exon-exon | NOL4L | 20 | - | COMMD7 | | - |
| exon-exon | TADA2A | | + | GDPD4 | 11 | - |
| exon-exon | LINC02728 | | - | PLXDC1 | 17 | - |
| exon-exon | GAB2 | 11 | - | MYO7A | 11 | + |
| exon-exon | ACER3 | 11 | + | THRSP | | + |
| exon-exon | PVT1 | 8 | + | CASC21 | | + |
| exon-exon | CLASRP | 19 | + | RELB | | + |
| exon-exon | KLF3 | 4 | + | SCFD2 | | - |
| exon-exon | HSP90AB1 | 6 | + | SLC29A1 | 6 | + |
| exon-exon | ZNF771 | 16 | + | ZNF48 | 16 | + |
| exon-exon | CUEDC1 | 17 | - | HSF5 | | - |
| exon-exon | SOCS7 | 17 | + | SRCIN1 | | - |
| exon-exon | SENP2 | 3 | + | MAP3K13 | 3 | + |
| exon-exon | ADNP | 20 | - | DPM1 | 20 | - |
| exon-exon | ZFP37 | | - | LOC102723932 | | - |
| exon-exon | PTMA | 2 | + | CASC3 | 17 | + |
| exon-exon | HEYL | 1 | - | COL9A2 | | - |
| exon-exon | CANX | 5 | + | RUFY1 | 5 | + |
| exon-exon | GORASP2 | 2 | + | PKP4-AS1 | 2 | - |
| exon-exon | KCMF1 | 2 | + | DNAH6 | | + |
| exon-exon | ATP11C | X | - | LOC101928833 | | - |
| exon-exon | TMEM14C | 6 | + | PAK1IP1 | 6 | + |
| exon-exon | RNGTT | 6 | - | MDN1 | 6 | - |
| exon-exon | HACD3 | | + | ANKDD1A | 15 | + |
| exon-exon | EIF4G3 | 1 | - | SVIP | 11 | - |
| exon-exon | GRIN2A | 16 | - | LOC105371080 | | - |
| exon-exon | PRDM16 | | + | NARS2 | 11 | - |
| exon-exon | NFIX | 19 | + | RAD23A | 19 | + |
| exon-exon | ZMYND8 | 20 | - | SULF2 | 20 | - |
| exon-exon | FDFT1 | 8 | + | NEIL2 | 8 | + |
| exon-exon | B4GALNT3 | 12 | + | CCDC77 | 12 | + |
| exon-exon | STX16-NPEPL1 | 20 | + | EVI5 | 1 | - |
| exon-exon | DDX50 | 10 | + | HNRNPH3 | 10 | + |
| exon-exon | USP32 | 17 | - | IKZF3 | 17 | - |
| exon-exon | LUC7L3 | 17 | + | C17orf64 | | + |
| exon-exon | LRP5 | 11 | + | DRAP1 | 11 | + |
| exon-exon | LIG3 | 17 | + | LOC105371768 | 17 | + |
| exon-exon | CASC3 | 17 | + | FCHSD2 | 11 | - |
| exon-exon | RPL36 | 19 | + | MFSD12 | 19 | - |
| exon-exon | MFSD12 | 19 | - | RPL36 | 19 | + |
| exon-exon | DDX5 | 17 | - | PRKDC | 8 | - |
| exon-exon | MAP2K7 | 19 | + | SH3GL1 | 19 | - |
| exon-exon | IGSF3 | | - | TBX15 | | - |
| exon-exon | RASSF3 | 12 | + | LINC02408 | | + |
| exon-exon | PPM1H | 12 | - | USP15 | 12 | + |
| exon-exon | DYRK2 | 12 | + | LOC102724421 | | - |
| exon-exon | ARHGAP23 | 17 | + | ASIC2 | 17 | - |
| exon-exon | ARFGAP2 | 11 | - | PEMT | 17 | - |
| exon-exon | ARFGEF2 | 20 | + | TAFA5 | | + |
| exon-exon | WDR35 | | - | PUM2 | 2 | - |
| exon-exon | UNC13D | 17 | - | SRP68 | 17 | - |
| exon-exon | SHANK2 | 11 | - | ACTE1P | | - |
| exon-exon | RFT1 | 3 | - | DCP1A | 3 | - |
| exon-exon | INPP4A | | + | VWA3B | | + |
| exon-exon | FDCSP | | + | PRR27 | 4 | + |
| exon-exon | ARID1A | 1 | + | DHDDS | | + |
| exon-exon | BOP1 | | - | CYHR1 | 8 | - |
| exon-exon | RPL7L1 | 6 | + | FOXP4 | 6 | + |
| exon-exon | PTPN14 | 1 | - | LINC01744 | | - |
| exon-exon | CDK19 | 6 | - | ZFAND3 | 6 | + |
| exon-exon | FIG4 | 6 | + | WASF1 | 6 | - |
| exon-exon | ATG5 | 6 | - | LOC107986637 | | - |
| exon-exon | ASCC1 | 10 | - | MICU1 | 10 | - |
| exon-exon | PABPC1L | 20 | + | CPNE7 | 16 | + |
| exon-exon | ZHX2 | 8 | + | LOC105369147 | 8 | - |
| exon-exon | SKI | 1 | + | KCNT2 | | - |
| exon-exon | SRP68 | 17 | - | LPO | 17 | + |
| exon-exon | LOC105369699 | | + | GYG2 | X | + |
| exon-exon | TARBP1 | | - | RBM34 | 1 | - |
| exon-exon | NADK | | - | CFAP74 | 1 | - |
| exon-exon | KMT2B | 19 | + | ZBTB32 | 19 | + |
| exon-exon | FBXL8 | 16 | + | ALS2CL | | - |
| exon-exon | COQ4 | 9 | + | DNM1 | | + |
| exon-exon | TBC1D30 | | + | EEF1AKMT3 | 12 | + |
| exon-exon | PPM1H | 12 | - | AVIL | 12 | - |
| exon-exon | MDM2 | 12 | + | LINC02231 | | - |
| exon-exon | HECW1 | | + | COA1 | 7 | - |
| exon-exon | TSFM | 12 | + | LOC100506869 | | + |
| exon-exon | LINC02403 | | + | INHBC | | + |
| exon-exon | ECE1 | 1 | - | LOC112694756 | 16 | + |
| exon-exon | LOC100506869 | | + | CDK4 | 12 | - |
| exon-exon | R3HDM2 | 12 | - | LOC105369791 | | + |
| exon-exon | OS9 | 12 | + | LOC105369791 | | + |
| exon-exon | KDM4B | 19 | + | SNTG1 | | + |
| exon-exon | DCTN2 | 12 | - | LOC100506869 | | + |
| exon-exon | TBC1D15 | 12 | + | LGR5 | 12 | + |
| exon-exon | PDZRN4 | | + | LINC02426 | | + |
| exon-exon | SH3KBP1 | X | - | LCP1 | 13 | - |
| exon-exon | SDK1 | 7 | + | EGFR-AS1 | | - |
| exon-exon | FSCN1 | 7 | + | CD36 | | + |
| exon-exon | PPP1R9A-AS1 | 7 | - | GNGT1 | | + |
| exon-exon | NLGN1 | 3 | + | KASH5 | 19 | + |
| exon-exon | IGF2R | 6 | + | CNTNAP2 | 7 | + |
| exon-exon | CTDSP2 | 12 | - | OS9 | 12 | + |
| exon-exon | TIGAR | 12 | + | TSPAN9 | 12 | + |
| exon-exon | ADARB2 | | - | PFKP | 10 | + |
| exon-exon | TSFM | 12 | + | LOC100506869 | | + |
| exon-exon | ST6GAL1 | | + | UBXN7-AS1 | | + |
| exon-exon | RPL36 | 19 | + | TTYH1 | 19 | + |
| exon-exon | LRRN2 | | - | LEMD1 | 1 | - |
| exon-exon | RPS20 | 8 | - | IARS1 | 9 | - |
| exon-exon | FANK1 | 10 | + | STOX1 | | + |
| exon-exon | AP1B1 | 22 | - | IGLV8-61 | | + |
| exon-exon | MRPL50 | | - | ERP44 | 9 | - |
| exon-exon | EGFR | 7 | + | SEC61G-DT | 7 | + |
| exon-exon | RPS18 | 6 | + | MAK16 | | + |
| exon-exon | GNG7 | 19 | - | SGTA | | - |
| exon-exon | NEGR1 | 1 | - | ZRANB2 | | - |
| exon-exon | CTDSP2 | 12 | - | LOC100506869 | | + |
| exon-exon | KIDINS220 | 2 | - | C3orf70 | 3 | - |
| exon-exon | CDK5RAP2 | 9 | - | RCC1 | 1 | + |
| exon-exon | AMOTL1 | 11 | + | C11orf97 | | + |
| exon-exon | PEX14 | 1 | + | CLP1 | 11 | + |
| exon-exon | RPS6KC1 | | + | LYST | 1 | - |
| exon-exon | NSL1 | | - | LINC01740 | | + |
| exon-exon | ZSCAN2 | 15 | + | WDR73 | | - |
| exon-exon | ZWILCH | 15 | + | MAP2K1 | 15 | + |
| exon-exon | TNRC6B | 22 | + | LARGE1 | 22 | - |
| exon-exon | SLC20A2 | 8 | - | IKBKB | 8 | + |
| exon-exon | SHROOM3 | 4 | + | STX18 | 4 | - |
| exon-exon | PPP1CB | 2 | + | PLB1 | 2 | + |
| exon-exon | MED13L | 12 | - | RAC2 | 22 | - |
| exon-exon | KHDC4 | 1 | - | EAF1 | | + |
| exon-exon | U2AF2 | 19 | + | ZNF524 | | + |
| exon-exon | AGO2 | 8 | - | SAMD12 | 8 | - |
| exon-exon | EPHA2 | | - | ARHGEF19 | | - |
| exon-exon | EHD1 | 11 | - | BATF2 | | - |
| exon-exon | ZMYM6 | 1 | - | SCMH1 | 1 | - |
| exon-exon | ZDHHC14 | 6 | + | ARID1B | | + |
| exon-exon | SHOC2 | 10 | + | ADD3 | 10 | + |
| exon-exon | TOM1L2 | | - | NECAB2 | | + |
| exon-exon | SARS1 | 1 | + | STXBP3 | | + |
| exon-exon | PTPRJ | 11 | + | MADD | 11 | + |
| exon-exon | PITPNM3 | | - | STX8 | 17 | - |
| exon-exon | LRBA | 4 | - | ASIC5 | | - |
| exon-exon | KMT2C | 7 | - | PTPRN2 | 7 | - |
| exon-exon | FAM118A | 22 | + | ST7L | 1 | - |
| exon-exon | DDX31 | 9 | - | AK8 | | - |
| exon-exon | ZNF121 | 19 | - | NAGLU | | + |
| exon-exon | XPO6 | 16 | - | EYA4 | | + |
| exon-exon | RNLS | | - | GRID1 | 10 | - |
| exon-exon | ANP32B | 9 | + | TTLL3 | 3 | + |
| exon-exon | SGTA | 19 | - | BLOC1S5-TXNDC5 | 6 | - |
| exon-exon | PTPRT | 20 | - | RNLS | 10 | - |
| exon-exon | PPP2R2A | 8 | + | CSN2 | | - |
| exon-exon | OBSCN | 1 | + | NLRP3 | 1 | + |
| exon-exon | CWC27 | 5 | + | RANBP17 | 5 | + |
| exon-exon | CHD6 | 20 | - | INMT-MINDY4 | 7 | + |
| exon-exon | TFDP2 | 3 | - | ATR | 3 | - |
| exon-exon | RPRD1B | 20 | + | CTNNBL1 | 20 | + |
| exon-exon | PEPD | 19 | - | CHST8 | | + |
| exon-exon | ELF2 | 4 | - | NDUFC1 | | - |
| exon-exon | SETBP1 | 18 | + | FANCI | | + |
| exon-exon | STAG1 | 3 | - | NCK1 | 3 | + |
| exon-exon | SP1 | 12 | + | COPZ1 | 12 | + |
| exon-exon | RC3H2 | 9 | - | STK35 | 20 | + |
| exon-exon | ADARB2-AS1 | | + | GLDC | 9 | - |
| exon-exon | USP48 | 1 | - | WNT4 | 1 | - |
| exon-exon | TMEM123 | 11 | - | MMP7 | 11 | - |
| exon-exon | TBC1D9 | 4 | - | RNF150 | | - |
| exon-exon | JAKMIP2 | 5 | - | DPYSL3 | 5 | - |
| exon-exon | PTPRJ | 11 | + | STK33 | | - |
| exon-exon | PTPRJ | 11 | + | DDB2 | 11 | + |
| exon-exon | PPL | 16 | - | SP2 | 17 | + |
| exon-exon | PAF1 | 19 | - | MED29 | 19 | + |
| exon-exon | PAAF1 | 11 | + | RELT | | + |
| exon-exon | ITPK1 | 14 | - | AKR1A1 | | + |
| exon-exon | IQCG | 3 | - | LMLN-AS1 | | - |
| exon-exon | IFT172 | | - | RBKS | 2 | - |
| exon-exon | ECE1 | 1 | - | RAP1GAP | | - |
| exon-exon | DSTYK | 1 | - | LEMD1 | 1 | - |
| exon-exon | SPAG9 | 17 | - | PARP6 | 15 | - |
| exon-exon | CLK1 | 2 | - | FLACC1 | 2 | - |
| exon-exon | BZW2 | 7 | + | ATP8A2 | | + |
| exon-exon | B3GLCT | | + | KIF13B | 8 | - |
| exon-exon | WDR43 | 2 | + | BABAM2 | 2 | + |
| exon-exon | UBE2J2 | 1 | - | MXRA8 | | - |
| exon-exon | RBFOX2 | 22 | - | TMEM184B | 22 | - |
| exon-exon | NEK11 | 3 | + | COL6A6 | 3 | + |
| exon-exon | NCOA3 | 20 | + | MICALL1 | 22 | + |
| exon-exon | NAPB | 20 | - | INO80C | | - |
| exon-exon | OASL | 12 | - | KIAA1191 | 5 | - |
| exon-exon | LRP1B | 2 | - | ARFGAP3 | 22 | - |
| exon-exon | LAMA5 | 20 | - | CABLES2 | | - |
| exon-exon | ITCH | | + | BPIFB4 | | + |
| exon-exon | HNRNPUL2-BSCL2 | 11 | - | WDR74 | | - |
| exon-exon | GRB2 | 17 | - | GALK1 | | - |
| exon-exon | BRD1 | 22 | - | POLR2F | 22 | + |
| exon-exon | AHR | 7 | + | LRRC72 | | + |
| exon-exon | TBC1D14 | 4 | + | EVC2 | 4 | - |
| exon-exon | TAX1BP1 | 7 | + | AMPH | 7 | - |
| exon-exon | PHYKPL | 5 | - | LRP4-AS1 | | + |
| exon-exon | FAM114A1 | 4 | + | NPAS3 | 14 | + |
| exon-exon | PBX4 | | - | LPAR2 | 19 | - |
| exon-exon | NET1 | 10 | + | ZMYND11 | 10 | + |
| exon-exon | LRBA | 4 | - | SPPL3 | 12 | - |
| exon-exon | BABAM2 | 2 | + | TUBD1 | | - |
| exon-exon | ATP8A1 | 4 | - | FAM114A1 | | + |
| exon-exon | AMPH | | - | TAX1BP1 | 7 | + |
| exon-exon | CWF19L2 | 11 | - | VAV1 | 19 | + |
| exon-exon | CTBP2 | 10 | - | FBXO17 | | - |
| exon-exon | MAT2B | 5 | + | HMMR | 5 | + |
| exon-exon | SPC24 | | - | RACK1 | 5 | - |
| exon-exon | ARFGEF2 | 20 | + | BCAS3 | 17 | + |
| exon-exon | SUCO | 1 | + | DNM3 | 1 | + |
| exon-exon | DOK7 | 4 | + | HTT | 4 | + |
| exon-exon | LINC01460 | 2 | - | RBKS | 2 | - |
| exon-exon | ZNF526 | | + | CLASRP | 19 | + |
| exon-exon | RBFOX2 | 22 | - | MYH9 | 22 | - |
| exon-exon | KTN1 | 14 | + | ME3 | 11 | - |
| exon-exon | ITGA9 | 3 | + | STAC | | + |
| exon-exon | ADAMTS6 | 5 | - | CLPTM1L | 5 | - |
| exon-exon | FBXL18 | 7 | - | ACTB | 7 | - |
| exon-exon | EDF1 | 9 | - | COL5A1 | 9 | + |
| exon-exon | CCDC88C | 14 | - | PPP4R3A | 14 | - |
| exon-exon | RIMKLB | 12 | + | CEP112 | 17 | - |
| exon-exon | MAPKAPK2 | 1 | + | CR1 | | + |
| exon-exon | SYNRG | 17 | - | PLXDC1 | 17 | - |
| exon-exon | PHLDB3 | 19 | - | ETHE1 | 19 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | + |
| exon-exon | MAP4 | 3 | - | CAMP | | + |
| exon-exon | MAML3 | 4 | - | CLGN | 4 | - |
| exon-exon | KMT2E | 7 | + | LHFPL3 | 7 | + |
| exon-exon | DDX52 | 17 | - | PLXDC1 | 17 | - |
| exon-exon | CDH23 | | + | MACROH2A2 | 10 | + |
| exon-exon | B4GALT1 | 9 | - | BAG1 | 9 | - |
| exon-exon | APPL1 | | + | SPATA12 | 3 | + |
| exon-exon | ABI3BP | | - | IMPG2 | 3 | - |
| exon-exon | ARHGEF18 | 19 | + | CERS4 | 19 | + |
| exon-exon | CARS2 | 13 | - | OCIAD1 | 4 | + |
| exon-exon | ARFGAP2 | 11 | - | MTCH2 | 11 | - |
| exon-exon | ZNF669 | | - | ITPKB | 1 | - |
| exon-exon | DIP2C | 10 | - | PLD5 | 1 | - |
| exon-exon | PMEPA1 | | - | ATP6V0D1 | 16 | - |
| exon-exon | PCNX1 | 14 | + | CYP2J2 | | - |
| exon-exon | BCAS3 | 17 | + | PPM1D | 17 | + |
| exon-exon | ZNF442 | | - | NDUFB7 | 19 | - |
| exon-exon | SOCS5 | | + | PRADC1 | | - |
| exon-exon | SIPA1L3 | 19 | + | POLD1 | | + |
| exon-exon | XRCC5 | 2 | + | PTGR1 | 9 | - |
| exon-exon | NDST1 | | + | SEMA6A | 5 | - |
| exon-exon | PPP1R37 | | + | NWD1 | | + |
| exon-exon | NPC1 | | - | OSBPL1A | 18 | - |
| exon-exon | MICALL1 | 22 | + | EIF3L | 22 | + |
| exon-exon | KLHL14 | | - | CCDC178 | | - |
| exon-exon | DPP9 | 19 | - | DHX8 | 17 | + |
| exon-exon | KIAA1217 | 10 | + | RNF10 | 12 | + |
| exon-exon | CPD | 17 | + | EFCAB5 | 17 | + |
| exon-exon | USP53 | | + | MYOZ2 | 4 | + |
| exon-exon | UBE2J2 | 1 | - | ACAP3 | 1 | - |
| exon-exon | CNBP | 3 | - | FBL | 19 | - |
| exon-exon | SCAPER | 15 | - | TSPAN3 | 15 | - |
| exon-exon | PRRC2A | 6 | + | AIF1 | 6 | + |
| exon-exon | PCIF1 | 20 | + | UBE2C | 20 | + |
| exon-exon | AMOTL2 | 3 | - | TOPBP1 | 3 | - |
| exon-exon | VPS13A | | + | SNRPF | 12 | + |
| exon-exon | TTYH3 | 7 | + | SMAP1 | 6 | + |
| exon-exon | STRN4 | 19 | - | AP2S1 | 19 | - |
| exon-exon | SLC2A4RG | 20 | + | ZGPAT | 20 | + |
| exon-exon | RHOA | 3 | - | NICN1 | 3 | - |
| exon-exon | CD63 | 12 | - | SND1 | 7 | + |
| exon-exon | QTRT2 | 3 | + | HMG20A | 15 | + |
| exon-exon | MPP7 | | - | MGMT | 10 | + |
| exon-exon | LYRM4 | | - | HOXD13 | 2 | + |
| exon-exon | FNDC3B | 3 | + | IQCJ-SCHIP1 | 3 | + |
| exon-exon | ERBIN | 5 | + | NLN | | + |
| exon-exon | DHRS12 | 13 | - | KLF5 | 13 | + |
| exon-exon | RNF185 | 22 | + | FARP1 | 13 | + |
| exon-exon | GAS6-AS1 | | + | SMARCB1 | 22 | + |
| exon-exon | ZACN | | + | PRRC2A | 6 | + |
| exon-exon | CTNNAL1 | 9 | - | EPB41L4B | | - |
| exon-exon | SPRED3 | | + | RASGRP4 | | - |
| exon-exon | TNFSF10 | 3 | - | FNDC3B | 3 | + |
| exon-exon | CLDN1 | | - | FNDC3B | 3 | + |
| exon-exon | UBR2 | | + | ANHX | | - |
| exon-exon | ST6GAL1 | | + | HRG | 3 | + |
| exon-exon | RCCD1 | 15 | + | COL19A1 | 6 | + |
| exon-exon | RASSF3 | 12 | + | GLTP | 12 | - |
| exon-exon | TSC2 | | + | CHTF18 | | + |
| exon-exon | PLXDC2 | 10 | + | MDH1B | 2 | - |
| exon-exon | RNPS1 | 16 | - | UBA2 | 19 | + |
| exon-exon | MMS19 | 10 | - | CRTAC1 | | - |
| exon-exon | HS2ST1 | 1 | + | SH3GLB1 | 1 | + |
| exon-exon | ENSA | 1 | - | CTSS | 1 | - |
| exon-exon | KDSR | | - | SERPINB5 | | + |
| exon-exon | TGM2 | 20 | - | TRPM5 | | - |
| exon-exon | KCTD1 | 18 | - | TWSG1 | | + |
| exon-exon | ARIH1 | 15 | + | TMEM202 | | + |
| exon-exon | ARHGEF1 | 19 | + | CBLC | 19 | + |
| exon-exon | SCARB2 | 4 | - | TARS3 | 15 | - |
| exon-exon | WDR70 | 5 | + | NIPBL | 5 | + |
| exon-exon | TTC27 | | + | BIRC6 | 2 | + |
| exon-exon | TRAIP | | - | WASF2 | 1 | - |
| exon-exon | TMEM63A | 1 | - | SDE2 | 1 | - |
| exon-exon | TBC1D22A | 22 | + | TRMU | 22 | + |
| exon-exon | PTPN4 | | + | CFAP221 | | + |
| exon-exon | MECOM | 3 | - | LRRC34 | | - |
| exon-exon | ITCH | | + | AHCY | 20 | - |
| exon-exon | INTS4 | 11 | - | TENM4 | 11 | - |
| exon-exon | GON4L | 1 | - | SYT11 | 1 | + |
| exon-exon | ESR1 | 6 | + | CCDC170 | | + |
| exon-exon | DSTYK | 1 | - | CCSAP | | - |
| exon-exon | AFAP1L2 | 10 | - | ABLIM1 | 10 | - |
| exon-exon | ADD3 | 10 | + | AFAP1L2 | | - |
| exon-exon | PDLIM1 | 10 | - | SORBS1 | 10 | - |
| exon-exon | NME7 | 1 | - | KIFAP3 | 1 | - |
| exon-exon | CARMIL1 | 6 | + | MEIS2 | 15 | - |
| exon-exon | SF1 | 11 | - | NAB1 | 2 | + |
| exon-exon | LENG1 | 19 | - | ACSBG2 | | + |
| exon-exon | FTL | 19 | + | MYH9 | 22 | - |
| exon-exon | FARS2 | 6 | + | HSD17B11 | 4 | - |
| exon-exon | ESRRG | 1 | - | MTARC2 | | + |
| exon-exon | UBQLN1 | 9 | - | SLC28A3 | | - |
| exon-exon | UBQLN2 | X | + | MAP2K4 | 17 | + |
| exon-exon | RPRD2 | 1 | + | CA14 | | + |
| exon-exon | FGD4 | 12 | + | FAR2 | 12 | + |
| exon-exon | RSF1 | 11 | - | INTS4 | 11 | - |
| exon-exon | EPPK1 | 8 | - | CYHR1 | 8 | - |
| exon-exon | DDX6 | 11 | - | LNX2 | 13 | - |
| exon-exon | CCDC85C | 14 | - | TDP1 | | + |
| exon-exon | ATP1B1 | 1 | + | FMO4 | 1 | + |
| exon-exon | SLC9A1 | 1 | - | UBXN11 | 1 | - |
| exon-exon | SPATS2L | 2 | + | HAT1 | 2 | + |
| exon-exon | SORBS1 | 10 | - | TCTN3 | 10 | - |
| exon-exon | RAI1 | 17 | + | MTUS2 | 13 | + |
| exon-exon | RNF11 | 1 | + | FAF1 | 1 | - |
| exon-exon | ATP6V0A4 | 7 | - | WASHC3 | 12 | - |
| exon-exon | STX8 | 17 | - | TMEM35A | X | + |
| exon-exon | SLCO3A1 | | + | GNB5 | 15 | - |
| exon-exon | TSPAN15 | 10 | + | HK1 | 10 | + |
| exon-exon | TRAF3IP2 | 6 | - | FYN | 6 | - |
| exon-exon | NEMP1 | | - | CTDSP2 | 12 | - |
| exon-exon | TIMP3 | 22 | + | FBXO7 | 22 | + |
| exon-exon | SORL1 | 11 | + | TECTA | 11 | + |
| exon-exon | PPP1CB | 2 | + | PLB1 | 2 | + |
| exon-exon | PANK2 | | + | ATRN | 20 | + |
| exon-exon | PRKG1 | 10 | + | RASL11B | | + |
| exon-exon | NRG1 | | + | DAZAP2 | 12 | + |
| exon-exon | JUP | 17 | - | P3H4 | 17 | - |
| exon-exon | GATAD2A | 19 | + | CHERP | | - |
| exon-exon | EHMT2 | 6 | - | NELFE | | - |
| exon-exon | CEP350 | | + | TOR1AIP1 | 1 | + |
| exon-exon | SMARCA4 | 19 | + | CARM1 | 19 | + |
| exon-exon | SHROOM3 | 4 | + | CCDC68 | | - |
| exon-exon | RRAGC | | - | EIF2B3 | 1 | - |
| exon-exon | NOVA1 | 14 | - | YLPM1 | 14 | + |
| exon-exon | PTPRF | 1 | + | PARD3 | 10 | - |
| exon-exon | NBPF1 | 1 | - | ANKRD13C | | - |
| exon-exon | PATJ | 1 | + | NEGR1 | 1 | - |
| exon-exon | GANAB | 11 | - | UBXN1 | 11 | - |
| exon-exon | FAM168A | | - | PRKCQ | 10 | - |
| exon-exon | DOC2B | | - | RPH3AL | | - |
| exon-exon | ANKRD13C | | - | RALYL | 8 | + |
| exon-exon | ACER2 | | + | DENND4C | | + |
| exon-exon | VPS35 | 16 | - | ITFG1 | 16 | - |
| exon-exon | USP34 | 2 | - | WDPCP | 2 | - |
| exon-exon | TEAD1 | 11 | + | GDPD4 | 11 | - |
| exon-exon | SLC38A10 | 17 | - | P4HB | 17 | - |
| exon-exon | SIPA1L3 | 19 | + | GTF2F1 | 19 | - |
| exon-exon | PEX14 | 1 | + | RBP7 | | + |
| exon-exon | NXN | 17 | - | SMG6 | 17 | - |
| exon-exon | MARK3 | 14 | + | CERS6 | 2 | + |
| exon-exon | NNAT | 20 | + | RPN2 | 20 | + |
| exon-exon | FUT8 | 14 | + | CHURC1-FNTB | 14 | + |
| exon-exon | CTNNA1 | 5 | + | KDM3B | 5 | + |
| exon-exon | ARID2 | 12 | + | TMEM117 | 12 | + |
| exon-exon | WDR33 | 2 | - | ATIC | 2 | + |
| exon-exon | USP42 | 7 | + | ANKRD61 | | + |
| exon-exon | RBFOX2 | 22 | - | CACNG2 | | - |
| exon-exon | ITCH | | + | ASIP | 20 | + |
| exon-exon | CSNK1A1 | 5 | - | PDE6A | | - |
| exon-exon | RREB1 | 6 | + | LY86 | | + |
| exon-exon | GSK3A | 19 | - | NTF4 | | - |
| exon-exon | NFATC2IP | 16 | + | LRRC8A | 9 | + |
| exon-exon | ZFAND1 | 8 | - | ZC2HC1A | 8 | + |
| exon-exon | UBA1 | X | + | KRBOX4 | | + |
| exon-exon | PSTPIP1 | 15 | + | RCN2 | 15 | + |
| exon-exon | PRKAR2A | 3 | - | QRICH1 | 3 | - |
| exon-exon | MGST2 | 4 | + | LRBA | 4 | - |
| exon-exon | MAPKAPK3 | 3 | + | TUG1 | 22 | + |
| exon-exon | HERC1 | 15 | - | DAPK2 | 15 | - |
| exon-exon | MAEA | 4 | + | CTBP1 | 4 | - |
| exon-exon | FBXL20 | 17 | - | ORMDL3 | 17 | - |
| exon-exon | EP300 | 22 | + | XPNPEP3 | 22 | + |
| exon-exon | CCND3 | 6 | - | GRK2 | 11 | + |
| exon-exon | TPX2 | 20 | + | HM13 | 20 | + |
| exon-exon | TPX2 | 20 | + | DEFB123 | | + |
| exon-exon | RHPN2 | 19 | - | PEPD | 19 | - |
| exon-exon | RHEB | | - | ACTA2 | 10 | - |
| exon-exon | PPFIBP1 | 12 | + | SMCO2 | | + |
| exon-exon | NUP210 | 3 | - | WNT7A | | - |
| exon-exon | KPNA6 | 1 | + | KHDRBS1 | 1 | + |
| exon-exon | MUC16 | 19 | - | OR7G3 | | - |
| exon-exon | DEK | 6 | - | KDM1B | 6 | + |
| exon-exon | CTPS1 | 1 | + | NFYC | 1 | + |
| exon-exon | CHRNA9 | | + | RHOH | | + |
| exon-exon | ABCD3 | 1 | + | ABCA4 | 1 | - |
| exon-exon | SELENOF | 1 | - | MAGOH | 1 | - |
| exon-exon | C3 | 19 | - | SH2D3A | | - |
| exon-exon | AGTPBP1 | 9 | - | BOLL | | - |
| exon-exon | PLA2G6 | 22 | - | DNAL4 | | - |
| exon-exon | MTMR8 | | - | ZC4H2 | X | - |
| exon-exon | ENOPH1 | 4 | + | ARGLU1 | 13 | - |
| exon-exon | ME2 | 18 | + | DPP10 | 2 | + |
| exon-exon | CDKAL1 | 6 | + | FARS2 | 6 | + |
| exon-exon | ALG8 | | - | TENM4 | 11 | - |
| exon-exon | RALGAPA2 | 20 | - | NINL | 20 | - |
| exon-exon | RRP1 | 21 | + | DLG1 | 3 | - |
| exon-exon | RIT1 | | - | LMNA | 1 | + |
| exon-exon | MSL2 | 3 | - | STAG1 | 3 | - |
| exon-exon | MECOM | 3 | - | LINC00578 | | + |
| exon-exon | CHCHD3 | 7 | - | EXOC4 | 7 | + |
| exon-exon | DLG1 | 3 | - | RRP1 | 21 | + |
| exon-exon | ARHGAP23 | 17 | + | CYB561 | 17 | - |
| exon-exon | PPP3CA | 4 | - | BPNT1 | 1 | - |
| exon-exon | MYBBP1A | 17 | - | MYH10 | 17 | - |
| exon-exon | DECR1 | 8 | + | RIPK2 | 8 | + |
| exon-exon | COPB1 | 11 | - | CYP2R1 | 11 | - |
| exon-exon | B4GALT5 | 20 | - | SPATA2 | | - |
| exon-exon | AXIN1 | 16 | - | CDH1 | 16 | + |
| exon-exon | ATP2A3 | | - | RTEL1-TNFRSF6B | 20 | + |
| exon-exon | AZIN2 | | + | HPCA | 1 | + |
| exon-exon | UTRN | 6 | + | ZC2HC1B | 6 | + |
| exon-exon | ESR1 | 6 | + | AKAP12 | 6 | + |
| exon-exon | XPO6 | 16 | - | PARN | 16 | - |
| exon-exon | PRPF4B | 6 | + | CDYL | 6 | + |
| exon-exon | KDM4B | 19 | + | TNFAIP8L1 | | + |
| exon-exon | ITGAV | 2 | + | DEFB132 | | + |
| exon-exon | IPO13 | | + | CFAP57 | | + |
| exon-exon | HELQ | | - | ABRAXAS1 | 4 | - |
| exon-exon | ARRDC1 | 9 | + | GLB1L2 | 11 | + |
| exon-exon | RORA | 15 | - | ANXA2 | 15 | - |
| exon-exon | DSTYK | 1 | - | NUAK2 | | - |
| exon-exon | SP2-AS1 | 17 | - | COPZ2 | 17 | - |
| exon-exon | ZZZ3 | 1 | - | NFIA | 1 | + |
| exon-exon | TUT7 | | - | SHC3 | 9 | - |
| exon-exon | VPS8 | 3 | + | ACTL6A | 3 | + |
| exon-exon | UTRN | 6 | + | PHACTR2 | 6 | + |
| exon-exon | UNKL | 16 | - | IFT140 | 16 | - |
| exon-exon | TTLL5 | 14 | + | VRTN | 14 | + |
| exon-exon | AGBL4 | 1 | - | ELAVL4 | 1 | + |
| exon-exon | TRAPPC10 | 21 | + | PKNOX1 | 21 | + |
| exon-exon | TRAF3IP1 | 2 | + | LOC101928881 | | + |
| exon-exon | TRAF3 | | + | ERN1 | | - |
| exon-exon | TRAF2 | 9 | + | RABL6 | 9 | + |
| exon-exon | TMEM182 | 2 | + | SLC9A2 | | + |
| exon-exon | THOC5 | 22 | - | SEC14L3 | | - |
| exon-exon | RSF1 | 11 | - | TENM4 | 11 | - |
| exon-exon | RCC1 | 1 | + | UBE2D2 | 5 | + |
| exon-exon | NRP1 | 10 | - | PARD3 | 10 | - |
| exon-exon | PBXIP1 | 1 | - | ARHGEF2 | 1 | - |
| exon-exon | MATN2 | | + | LAPTM4B | 8 | + |
| exon-exon | KRT5 | 12 | - | AAAS | 12 | - |
| exon-exon | INPP4B | 4 | - | DEPTOR | 8 | + |
| exon-exon | IMPG2 | | - | SENP7 | 3 | - |
| exon-exon | GTF2IRD1 | 7 | + | LIMK1 | | + |
| exon-exon | GTF2IRD1 | 7 | + | CLIP2 | 7 | + |
| exon-exon | TOGARAM2 | | + | BABAM2 | 2 | + |
| exon-exon | HS6ST2 | X | - | GPC3 | X | - |
| exon-exon | ESR1 | 6 | + | RAB32 | | + |
| exon-exon | DNAJC11 | 1 | - | UTS2 | | - |
| exon-exon | CTNNA1 | 5 | + | SEC24A | 5 | + |
| exon-exon | CSNK1A1 | 5 | - | CAMK2A | 5 | - |
| exon-exon | ANKFY1 | 17 | - | NLRP1 | 17 | - |
| exon-exon | ADSL | 22 | + | TNRC6B | 22 | + |
| exon-exon | SPINT2 | 19 | + | VPS26B | 11 | + |
| exon-exon | CHD7 | | + | RAB2A | 8 | + |
| exon-exon | ARHGEF11 | 1 | - | CEP131 | 17 | - |
| exon-exon | ZNF808 | 19 | + | LIG1 | 19 | - |
| exon-exon | USF2 | 19 | + | THEG5 | | - |
| exon-exon | KIF5B | 10 | - | ZEB1 | 10 | + |
| exon-exon | IFNAR1 | 21 | + | KMT2B | 19 | + |
| exon-exon | AKT2 | 19 | - | DPY19L3 | | + |
| exon-exon | CCDC6 | 10 | - | RET | 10 | + |
| exon-exon | SETD3 | 14 | - | ATG2B | 14 | - |
| exon-exon | NFKB1 | 4 | + | KLHDC10 | 7 | + |
| exon-exon | ARHGAP26 | 5 | + | AFAP1L1 | 5 | + |
| exon-exon | URI1 | 19 | + | GPC6 | 13 | + |
| exon-exon | TRIM14 | 9 | - | GAB2 | 11 | - |
| exon-exon | SAP30BP | 17 | + | TMEM94 | 17 | + |
| exon-exon | MACF1 | 1 | + | LATS2 | 13 | - |
| exon-exon | JADE3 | X | + | CP | 3 | - |
| exon-exon | FOXJ3 | 1 | - | SCMH1 | 1 | - |
| exon-exon | DNAJC3 | 13 | + | FREM2-AS1 | | - |
| exon-exon | DDB1 | 11 | - | CPSF7 | 11 | - |
| exon-exon | LIMS1 | 2 | + | STARD7 | 2 | - |
| exon-exon | ZNF445 | 3 | - | TCAIM | 3 | + |
| exon-exon | TMEM53 | 1 | - | CTPS1 | 1 | + |
| exon-exon | SHANK2 | 11 | - | COL8A2 | 1 | - |
| exon-exon | JMJD1C | 10 | - | ZNF365 | 10 | + |
| exon-exon | CTPS1 | 1 | + | TMEM53 | | - |
| exon-exon | ATAD2 | 8 | - | KCNQ3 | 8 | - |
| exon-exon | PLEKHM2 | | + | LPCAT2 | 16 | + |
| exon-exon | USP4 | 3 | - | NICN1 | 3 | - |
| exon-exon | RECK | 9 | + | DPP7 | 9 | - |
| exon-exon | MVB12A | | + | MYO9B | 19 | + |
| exon-exon | HIPK2 | 7 | - | PARP12 | 7 | - |
| exon-exon | HCG18 | 6 | - | ABHD16A | 6 | - |
| exon-exon | COL14A1 | 8 | + | DEPTOR | 8 | + |
| exon-exon | RBM4 | 11 | + | CCS | | + |
| exon-exon | ATAD3C | | + | TTLL10 | | + |
| exon-exon | AP3D1 | 19 | - | LMNB2 | 19 | - |
| exon-exon | VAV2 | 9 | - | ALG1 | 16 | + |
| exon-exon | SCAPER | 15 | - | TLN2 | 15 | + |
| exon-exon | RPRD1B | 20 | + | ID1 | 20 | + |
| exon-exon | P4HA1 | 10 | - | CFAP70 | | - |
| exon-exon | MAEA | 4 | + | CTBP1 | 4 | - |
| exon-exon | IST1 | 16 | + | AP1G1 | 16 | - |
| exon-exon | HID1 | | - | STIM2 | 4 | + |
| exon-exon | FUBP3 | 9 | + | CDADC1 | | + |
| exon-exon | RBM14 | 11 | + | CCS | | + |
| exon-exon | CDADC1 | | + | FUBP3 | 9 | + |
| exon-exon | AHDC1 | 1 | - | LINC00502 | | + |
| exon-exon | CDC20 | 1 | + | DEF8 | | + |
| exon-exon | AGPAT5 | 8 | + | FDFT1 | 8 | + |
| exon-exon | ARIH2 | 3 | + | SLMAP | 3 | + |
| exon-exon | ZSWIM6 | 5 | + | NDUFAF2 | 5 | + |
| exon-exon | ULK2 | 17 | - | NT5M | | + |
| exon-exon | ITPR2 | 12 | - | TM7SF3 | 12 | - |
| exon-exon | HEXD | | + | SLC16A3 | 17 | + |
| exon-exon | HADHA | 2 | - | ZNF385B | 2 | - |
| exon-exon | PRMT2 | 21 | + | ARHGEF9 | X | - |
| exon-exon | EXOC4 | 7 | + | NPFFR2 | | + |
| exon-exon | ATP6V1E1 | 22 | - | CECR2 | 22 | + |
| exon-exon | ATP6V1C1 | 8 | + | AZIN1-AS1 | | + |
| exon-exon | ZNF558 | | - | MBD3L1 | | + |
| exon-exon | GATAD2B | 1 | - | NUP210L | 1 | - |
| exon-exon | ATP7A | | + | COX7B | X | + |
| exon-exon | VPS13D | 1 | + | ARHGAP39 | 8 | - |
| exon-exon | TSPAN31 | 12 | + | OS9 | 12 | + |
| exon-exon | SWI5 | 9 | + | DNM1 | | + |
| exon-exon | PSKH1 | | + | NUTF2 | | + |
| exon-exon | NPTN | 15 | - | SET | 9 | + |
| exon-exon | PRRC2B | 9 | + | D2HGDH | | + |
| exon-exon | MORC2 | 22 | - | TOM1 | 22 | + |
| exon-exon | EIF3H | 8 | - | CIT | | - |
| exon-exon | PTPRE | | + | SH3PXD2A | 10 | - |
| exon-exon | ARHGAP35 | 19 | + | BAIAP2 | 17 | + |
| exon-exon | CNOT2 | 12 | + | NUP107 | 12 | + |
| exon-exon | IMMP2L | 7 | - | LOC105375451 | | - |
| exon-exon | RCC1 | 1 | + | SERINC2 | 1 | + |
| exon-exon | KCNQ1 | 11 | + | CD81 | 11 | + |
| exon-exon | FLOT2 | 17 | - | SEZ6 | 17 | - |
| exon-exon | CTBP2 | 10 | - | CTNNB1 | 3 | + |
| exon-exon | CCNT2 | 2 | + | MAP3K19 | 2 | - |
| exon-exon | ZKSCAN4 | | - | SLC44A4 | 6 | - |
| exon-exon | PARD3 | 10 | - | ARHGAP12 | 10 | - |
| exon-exon | OXR1 | 8 | + | CASC8 | 8 | - |
| exon-exon | ZNF217 | 20 | - | BCAS1 | 20 | - |
| exon-exon | TNFRSF19 | | + | SACS-AS1 | | + |
| exon-exon | STK16 | 2 | + | PLCD4 | 2 | + |
| exon-exon | C2CD2 | | - | HECTD2 | 10 | + |
| exon-exon | SIPA1L3 | 19 | + | PTOV1 | 19 | + |
| exon-exon | MCF2L | | + | LAMA5 | 20 | - |
| exon-exon | FHIT | 3 | - | STT3B | | + |
| exon-exon | ASAH2 | 10 | - | SGMS1 | 10 | - |
| exon-exon | KIAA1671 | 22 | + | HTR1E | 6 | + |
| exon-exon | DEAF1 | 11 | - | CHID1 | 11 | - |
| exon-exon | AGRN | 1 | + | HMGB3 | | + |
| exon-exon | PGAP3 | 17 | - | AATF | 17 | + |
| exon-exon | CPD | 17 | + | WNT3 | | - |
| exon-exon | OSBPL5 | | - | TRPM5 | | - |
| exon-exon | DDX52 | 17 | - | IKZF3 | 17 | - |
| exon-exon | MED1 | 17 | - | GRB7 | | + |
| exon-exon | LRBA | 4 | - | GATB | 4 | - |
| exon-exon | HIBADH | 7 | - | LOC105375304 | | - |
| exon-exon | GTPBP2 | | - | RSPH9 | 6 | + |
| exon-exon | FOXP4 | | + | GUCA1A | 6 | + |
| exon-exon | CERS6 | | + | ABCB11 | 2 | - |
| exon-exon | FANCI | 15 | + | YPEL1 | 22 | - |
| exon-exon | WWP2 | 16 | + | NFAT5 | 16 | + |
| exon-exon | TBC1D15 | 12 | + | LGR5 | 12 | + |
| exon-exon | SRPK2 | 7 | - | ATXN7L1 | 7 | - |
| exon-exon | SMG5 | 1 | - | PMF1-BGLAP | 1 | + |
| exon-exon | RTN3 | 11 | + | SLC22A9 | | + |
| exon-exon | REV3L | 6 | - | FYN | 6 | - |
| exon-exon | NOL10 | 2 | - | SND1 | 7 | + |
| exon-exon | MIB1 | | + | GREB1L | 18 | + |
| exon-exon | ME1 | | - | SNAP91 | 6 | - |
| exon-exon | ARFRP1 | 20 | - | IRX2 | 5 | - |
| exon-exon | MBNL2 | 13 | + | HS6ST3 | 13 | + |
| exon-exon | ITSN1 | 21 | + | LINC00945 | | + |
| exon-exon | ITGB5 | 3 | - | ZNF148 | 3 | - |
| exon-exon | IQGAP1 | 15 | + | SEMA4B | 15 | + |
| exon-exon | ELP1 | 9 | - | EPB41L4B | | - |
| exon-exon | FARP2 | 2 | + | SEPTIN2 | 2 | + |
| exon-exon | RLF | 1 | + | PPT1 | 1 | - |
| exon-exon | DNM2 | 19 | + | SLC44A2 | 19 | + |
| exon-exon | CTCF | 16 | + | HSD11B2 | 16 | + |
| exon-exon | CMTM7 | 3 | + | GPD1L | 3 | + |
| exon-exon | CCND3 | 6 | - | TRERF1 | 6 | - |
| exon-exon | ARHGAP5 | 14 | + | NPAS3 | 14 | + |
| exon-exon | ARHGAP29 | 1 | - | ALG14 | | - |
| exon-exon | ACVR1B | | + | ANKRD33 | | + |
| exon-exon | ABCC3 | 17 | + | TMEM104 | | + |
| exon-exon | MTMR2 | 11 | - | CLNS1A | 11 | - |
| exon-exon | KDM2A | 11 | + | SYNDIG1 | | + |
| exon-exon | EPB41L1 | 20 | + | CNBD2 | 20 | + |
| exon-exon | MEIS2 | 15 | - | TRPM1 | 15 | - |
| exon-exon | SPPL2A | 15 | - | TENM4 | 11 | - |
| exon-exon | PVT1 | 8 | + | TPCN2 | | + |
| exon-exon | MACROD1 | 11 | - | BAD | 11 | - |
| exon-exon | GAB2 | 11 | - | FGF7 | 15 | + |
| exon-exon | RLF | 1 | + | CAP1 | 1 | + |
| exon-exon | FAM168A | | - | PXDNL | | - |
| exon-exon | RANBP10 | 16 | - | USP10 | 16 | + |
| exon-exon | MREG | 2 | - | SPAG17 | 1 | - |
| exon-exon | SMCHD1 | | + | NDC80 | 18 | + |
| exon-exon | TBCD | 17 | + | HLCS | 21 | - |
| exon-exon | SETD2 | 3 | - | RBM6 | 3 | + |
| exon-exon | RPTOR | 17 | + | GPC3 | X | - |
| exon-exon | BCR | 22 | + | GNAZ | 22 | + |
| exon-exon | FAF1 | 1 | - | AGBL4 | 1 | - |
| exon-exon | TRA2B | 3 | - | LINC00879 | | + |
| exon-exon | SND1 | 7 | + | IMMP2L | 7 | - |
| exon-exon | PPP2R2A | 8 | + | SMIM19 | 8 | + |
| exon-exon | MSI1 | | - | KRT78 | | - |
| exon-exon | C1QTNF6 | 22 | - | RAC2 | 22 | - |
| exon-exon | ZBTB44 | 11 | - | FRS2 | 12 | + |
| exon-exon | TNS3 | 7 | - | ALG13 | | + |
| exon-exon | TMTC2 | 12 | + | MYRFL | 12 | + |
| exon-exon | TMEM255A | | - | FPR2 | 19 | + |
| exon-exon | EIF4G2 | 11 | - | TMEM41B | 11 | - |
| exon-exon | TANC2 | 17 | + | ARHGEF12 | 11 | + |
| exon-exon | SLIT3 | 5 | - | TBC1D30 | | + |
| exon-exon | SLC7A5 | 16 | - | NOS1AP | 1 | + |
| exon-exon | SEMA5A | | - | SLC6A19 | | + |
| exon-exon | RP9 | 7 | - | JAZF1-AS1 | | + |
| exon-exon | RASSF3 | 12 | + | STK10 | 5 | - |
| exon-exon | PTPRR | | - | NAV3 | | + |
| exon-exon | PPFIA2 | 12 | - | HMGA2 | 12 | + |
| exon-exon | OTOGL | | + | HMGA2 | 12 | + |
| exon-exon | CHD2 | 15 | + | AGBL1 | | + |
| exon-exon | NDUFS2 | 1 | + | SLC24A2 | 9 | - |
| exon-exon | NAV3 | | + | EVX1 | 7 | + |
| exon-exon | NAV3 | | + | DOK3 | 5 | - |
| exon-exon | KCNN3 | | - | YEATS4 | | + |
| exon-exon | JAZF1 | 7 | - | EVX1 | 7 | + |
| exon-exon | FXN | | + | FPR2 | 19 | + |
| exon-exon | RIPOR3 | 20 | - | TMEM189-UBE2V1 | 20 | - |
| exon-exon | ETS1 | 11 | - | UBE2V2 | 8 | + |
| exon-exon | DNM3OS | | - | TMTC2 | 12 | + |
| exon-exon | BNIP3 | 10 | - | MARCHF6 | 5 | + |
| exon-exon | DCAF6 | 1 | + | YEATS4 | | + |
| exon-exon | DCAF6 | 1 | + | HMCN1 | 1 | + |
| exon-exon | DBF4 | | + | VAMP4 | | - |
| exon-exon | DAP | 5 | - | SEMA5A | 5 | - |
| exon-exon | CPSF6 | 12 | + | COL9A1 | 6 | - |
| exon-exon | CD2AP | | + | MGAT4C | 12 | - |
| exon-exon | B4GALT3 | | - | ERO1B | 1 | - |
| exon-exon | ACVR2A | | + | SUMO1 | | - |
| exon-exon | NCAPD3 | 11 | - | ASPH | 8 | - |
| exon-exon | ABCA9 | 17 | - | TANC2 | 17 | + |
| exon-exon | AGAP1 | 2 | + | ATG4B | 2 | + |
| exon-exon | TBC1D32 | | - | RPF2 | 6 | + |
| exon-exon | R3HDM2 | 12 | - | TPH2 | 12 | + |
| exon-exon | NUP107 | 12 | + | PAAF1 | 11 | + |
| exon-exon | LRP1 | 12 | + | CAND1 | 12 | + |
| exon-exon | DNM3 | | + | TPH2 | 12 | + |
| exon-exon | UHRF1BP1L | 12 | - | ZDHHC17 | 12 | + |
| exon-exon | TMTC2 | 12 | + | LYZ | 12 | + |
| exon-exon | JARID2 | 6 | + | ZNF423 | 16 | - |
| exon-exon | SHPRH | | - | B4GALNT1 | | - |
| exon-exon | SART3 | 12 | - | PAH | | - |
| exon-exon | RSF1 | 11 | - | PRRC2C | 1 | + |
| exon-exon | PTPRR | | - | SNRPF | 12 | + |
| exon-exon | PLXNC1 | | + | TXNRD1 | 12 | + |
| exon-exon | LTA4H | 12 | - | BTBD11 | 12 | + |
| exon-exon | HECTD4 | 12 | - | LTA4H | 12 | - |
| exon-exon | GRM1 | 6 | + | CNOT2 | 12 | + |
| exon-exon | GNL1 | 6 | - | REPS1 | 6 | - |
| exon-exon | FRS2 | 12 | + | SBF2 | 11 | - |
| exon-exon | CHUK | | - | CHMP1A | 16 | - |
| exon-exon | EIF4G3 | 1 | - | SPSB1 | 1 | + |
| exon-exon | CSNK1G2 | 19 | + | PDE5A | 4 | - |
| exon-exon | BTBD2 | | - | KIAA1109 | 4 | + |
| exon-exon | BTBD11 | | + | CMKLR1 | | - |
| exon-exon | XPOT | | + | LYZ | 12 | + |
| exon-exon | VPS53 | 17 | - | TXNDC17 | | + |
| exon-exon | VPS13B | 8 | + | STAU2 | 8 | - |
| exon-exon | TANC2 | 17 | + | CASC17 | | - |
| exon-exon | ST6GALNAC6 | | - | NUP107 | 12 | + |
| exon-exon | TTC28 | 22 | - | SLMO2-ATP5E | 20 | - |
| exon-exon | SKA2 | 17 | - | HEATR6 | | - |
| exon-exon | NTN4 | | - | TRHDE | | + |
| exon-exon | NTN4 | | - | NUP107 | 12 | + |
| exon-exon | NEDD1 | | + | TMTC2 | 12 | + |
| exon-exon | NDUFB9 | 8 | + | CSMD3 | | - |
| exon-exon | MPRIP | 17 | + | TNFRSF13B | | - |
| exon-exon | MDM2 | 12 | + | SYK | 9 | + |
| exon-exon | LAMA2 | | + | UQCRB | 8 | - |
| exon-exon | RGL2 | 6 | - | PTMS | 12 | + |
| exon-exon | HMGA2 | 12 | + | NR2C1 | 12 | - |
| exon-exon | FRS2 | 12 | + | HMGA2 | 12 | + |
| exon-exon | EDA | | + | TEX11 | X | - |
| exon-exon | CTDSP2 | 12 | - | AUH | | - |
| exon-exon | CRAT | | - | TTLL11 | | - |
| exon-exon | CPQ | 8 | + | MATN2 | 8 | + |
| exon-exon | CEP290 | | - | VEZT | 12 | + |
| exon-exon | APC | 5 | + | NREP-AS1 | | + |
| exon-exon | NPEPPS | 17 | + | SLC25A3 | 12 | + |
| exon-exon | ABCA9 | 17 | - | CEP112 | 17 | - |
| exon-exon | STK40 | 1 | - | OSCP1 | 1 | - |
| exon-exon | PA2G4 | 12 | + | MARK1 | | + |
| exon-exon | HDX | | - | ERICH1 | 8 | - |
| exon-exon | DDX46 | 5 | + | TPO | 2 | + |
| exon-exon | DCTN2 | 12 | - | SRGAP1 | 12 | + |
| exon-exon | CD55 | 1 | + | RGS21 | | + |
| exon-exon | RBM39 | 20 | - | CRYZL1 | 21 | - |
| exon-exon | ZNF318 | | - | CD2AP | 6 | + |
| exon-exon | BRD4 | 19 | - | NUTM1 | 15 | + |
| exon-exon | ZDHHC17 | 12 | + | NCR2 | | + |
| exon-exon | SLC6A15 | 12 | - | MYRFL | 12 | + |
| exon-exon | PTPRR | | - | SLC6A15 | 12 | - |
| exon-exon | NAP1L1 | 12 | - | PTPRR | | - |
| exon-exon | LDLRAD3 | 11 | + | MOB2 | 11 | - |
| exon-exon | HDAC7 | 12 | - | SRGAP1 | 12 | + |
| exon-exon | DCPS | 11 | + | FGF3 | | - |
| exon-exon | ARNTL | 11 | + | RIC8B | | + |
| exon-exon | ACTB | 7 | - | LENG8 | 19 | + |
| exon-exon | TSFM | 12 | + | CPM | 12 | - |
| exon-exon | SEC16A | | - | RXRA | | + |
| exon-exon | PITPNM2 | 12 | - | ARHGEF25 | | + |
| exon-exon | OS9 | 12 | + | CEP85L | 6 | - |
| exon-exon | MLXIP | 12 | + | ASH2L | 8 | + |
| exon-exon | MCRS1 | 12 | - | SRRM4 | 12 | + |
| exon-exon | MAN1A1 | 6 | - | FMNL3 | 12 | - |
| exon-exon | LRRC4 | | - | LTA4H | 12 | - |
| exon-exon | STRN3 | 14 | - | SHFL | 19 | + |
| exon-exon | JAK2 | 9 | + | RIC1 | 9 | + |
| exon-exon | HDAC11 | 3 | + | CDH18 | | - |
| exon-exon | GNPTAB | 12 | - | DRAM1 | 12 | + |
| exon-exon | GLIPR1L1 | | + | RAB3IP | 12 | + |
| exon-exon | ELK3 | 12 | + | SBNO1 | 12 | - |
| exon-exon | CEP85L | 6 | - | TMEM120B | 12 | + |
| exon-exon | CEP85L | 6 | - | WASHC3 | 12 | - |
| exon-exon | CCT2 | 12 | + | KCNC2 | 12 | - |
| exon-exon | CAMSAP1 | 9 | - | LCN8 | | - |
| exon-exon | SLC12A8 | 3 | - | MYLK | 3 | - |
| exon-exon | CAMKK2 | 12 | - | PMCH | | - |
| exon-exon | BAK1 | | - | FAM83C | | - |
| exon-exon | ASH2L | 8 | + | CASS4 | | + |
| exon-exon | ARHGAP10 | | + | EDNRA | 4 | + |
| exon-exon | ZNF562 | 19 | - | DTX3 | | + |
| exon-exon | ZNF44 | 19 | - | MYRFL | 12 | + |
| exon-exon | MDM2 | 12 | + | TSPAN31 | 12 | + |
| exon-exon | ZDHHC17 | 12 | + | NAV3 | | + |
| exon-exon | TRIO | 5 | + | TERT | | - |
| exon-exon | TBX15 | | - | FMN2 | 1 | + |
| exon-exon | RPL13 | 16 | + | MYH9 | 22 | - |
| exon-exon | MPZL1 | 1 | + | TNFSF4 | 1 | - |
| exon-exon | METTL25 | 12 | + | GALNT9 | | - |
| exon-exon | MDM1 | | - | NAV3 | | + |
| exon-exon | HMGA2 | 12 | + | DNM3OS | | - |
| exon-exon | CPSF6 | 12 | + | TMBIM4 | 12 | - |
| exon-exon | CPSF6 | 12 | + | MYF6 | | + |
| exon-exon | CHD2 | 15 | + | DNM3OS | | - |
| exon-exon | YY1 | 14 | + | TESPA1 | | - |
| exon-exon | YEATS4 | | + | AGAP2 | 12 | - |
| exon-exon | MCM6 | 2 | - | ZRANB3 | 2 | - |
| exon-exon | TRHDE | 12 | + | TBC1D15 | 12 | + |
| exon-exon | STAT2 | 12 | - | B4GALNT1 | | - |
| exon-exon | SPRYD4 | 12 | + | MDM1 | | - |
| exon-exon | RAP1B | 12 | + | SCYL2 | 12 | + |
| exon-exon | PPP1R13B | 14 | - | PYM1 | 12 | - |
| exon-exon | NT5DC3 | | - | PTPRR | | - |
| exon-exon | MYO10 | 5 | - | SARNP | 12 | - |
| exon-exon | MOK | 14 | - | MUCL1 | | + |
| exon-exon | ITGA7 | 12 | - | MYRFL | 12 | + |
| exon-exon | ITGB1 | 10 | - | MYL9 | 20 | + |
| exon-exon | FRS2 | 12 | + | CPM | 12 | - |
| exon-exon | FBXL7 | 5 | + | NRDC | 1 | - |
| exon-exon | TAFA2 | 12 | - | TMBIM4 | 12 | - |
| exon-exon | DAB1 | 1 | - | DRAM1 | 12 | + |
| exon-exon | CHST11 | 12 | + | PTPRR | | - |
| exon-exon | CHPT1 | 12 | + | TXNRD1 | 12 | + |
| exon-exon | CCDC127 | | - | MUCL1 | | + |
| exon-exon | AHRR | 5 | + | AVIL | 12 | - |
| exon-exon | SLC2A13 | | - | ARHGDIB | 12 | - |
| exon-exon | RBBP7 | | - | NDUFAF4 | 6 | - |
| exon-exon | OS9 | 12 | + | CD48 | 1 | - |
| exon-exon | IL1RAPL1 | X | + | KERA | | - |
| exon-exon | DNM3 | | + | KERA | | - |
| exon-exon | DCAF6 | 1 | + | UFC1 | 1 | + |
| exon-exon | CPNE8 | 12 | - | PRMT8 | | + |
| exon-exon | ADIPOR2 | 12 | + | SLC2A13 | | - |
| exon-exon | TOX | 8 | - | CHD7 | | + |
| exon-exon | ZNF385A | 12 | - | NAV3 | | + |
| exon-exon | SYT1 | 12 | + | PHKB | 16 | + |
| exon-exon | NAV3 | | + | SLC6A15 | 12 | - |
| exon-exon | MDM2 | 12 | + | LINC00615 | | + |
| exon-exon | FRS2 | 12 | + | PLEKHG7 | | + |
| exon-exon | DERA | 12 | + | DNAJA2 | 16 | - |
| exon-exon | DCTN2 | 12 | - | NAV3 | | + |
| exon-exon | CTDSP2 | 12 | - | NFE2 | | - |
| exon-exon | CTDSP2 | 12 | - | CPM | 12 | - |
| exon-exon | TNS3 | 7 | - | PKD1L1 | 7 | - |
| exon-exon | CHD4 | 12 | - | CPM | 12 | - |
| exon-exon | CACNA1C | 12 | + | SLC6A15 | 12 | - |
| exon-exon | CACNA1C | 12 | + | EEA1 | 12 | - |
| exon-exon | ARHGEF7 | 13 | + | EXOC4 | 7 | + |
| exon-exon | ADAMTS7 | | - | PEAK1 | 15 | - |
| exon-exon | ZDHHC17 | 12 | + | RAB3IP | 12 | + |
| exon-exon | TRIO | 5 | + | TERT | | - |
| exon-exon | RRAS2 | | - | PSMA1 | 11 | - |
| exon-exon | PWWP2B | | + | LYST | 1 | - |
| exon-exon | PSMD1 | 2 | + | SP140L | 2 | + |
| exon-exon | NTN4 | | - | RAP1B | 12 | + |
| exon-exon | NTN4 | | - | KIFAP3 | 1 | - |
| exon-exon | MAP2K5 | 15 | + | MYRFL | 12 | + |
| exon-exon | IQCH | 15 | + | CTNND2 | 5 | - |
| exon-exon | FRS2 | 12 | + | ATXN1 | 6 | - |
| exon-exon | FBXL7 | 5 | + | CCT5 | 5 | + |
| exon-exon | FAM78B | 1 | - | RAB3IP | 12 | + |
| exon-exon | CNOT2 | 12 | + | CRADD | 12 | + |
| exon-exon | ATXN1 | 6 | - | SLC24A1 | 15 | + |
| exon-exon | ATXN1 | 6 | - | DNM3 | 1 | + |
| exon-exon | PCCA | 13 | + | CLYBL | | + |
| exon-exon | UHMK1 | 1 | + | DCAF8 | 1 | - |
| exon-exon | MTOR | 1 | - | ZMYM4-AS1 | | - |
| exon-exon | MKLN1 | 7 | + | DNM3 | 1 | + |
| exon-exon | LINC-PINT | 7 | - | FMO3 | | + |
| exon-exon | LINC-PINT | 7 | - | CCT3 | 1 | - |
| exon-exon | GATAD2B | 1 | - | GRM8 | 7 | - |
| exon-exon | ARHGEF11 | 1 | - | CD48 | 1 | - |
| exon-exon | ZFC3H1 | 12 | - | MON2 | 12 | + |
| exon-exon | XPR1 | 1 | + | TNR | 1 | - |
| exon-exon | KCNH6 | | + | ACE | | + |
| exon-exon | TBC1D15 | 12 | + | SLC16A7 | | + |
| exon-exon | SLC16A7 | | + | NUP107 | 12 | + |
| exon-exon | REV3L | 6 | - | TRAF3IP2 | 6 | - |
| exon-exon | RAB21 | | + | FRS2 | 12 | + |
| exon-exon | NHSL1 | 6 | - | CDIP1 | 16 | - |
| exon-exon | MON2 | 12 | + | TBC1D15 | 12 | + |
| exon-exon | KIAA1614 | 1 | + | F11R | 1 | - |
| exon-exon | HMGA2 | 12 | + | ARFGAP2 | 11 | - |
| exon-exon | IL13RA1 | X | + | DOCK11 | X | + |
| exon-exon | DIAPH2 | X | + | RAB3IP | 12 | + |
| exon-exon | CPM | 12 | - | MON2 | 12 | + |
| exon-exon | ATP9B | | + | LUC7L | 16 | - |
| exon-exon | ANKH | 5 | - | DNAH5 | | - |
| exon-exon | TMEM120B | | + | GRIP1 | 12 | - |
| exon-exon | PWP1 | | + | CCDC63 | 12 | + |
| exon-exon | PTPN11 | 12 | + | MYRFL | 12 | + |
| exon-exon | KRR1 | 12 | - | CDK17 | | - |
| exon-exon | GOLPH3L | 1 | - | HACD3 | 15 | + |
| exon-exon | KNTC1 | 12 | + | BTBD11 | 12 | + |
| exon-exon | HECTD4 | 12 | - | AMDHD1 | | + |
| exon-exon | GNS | 12 | - | NUP107 | 12 | + |
| exon-exon | FMNL3 | 12 | - | HECTD4 | 12 | - |
| exon-exon | ELK3 | 12 | + | KRT78 | | - |
| exon-exon | CHPT1 | 12 | + | ATXN2 | 12 | - |
| exon-exon | CAMKK2 | 12 | - | DIP2B | 12 | + |
| exon-exon | YEATS4 | | + | NME7 | 1 | - |
| exon-exon | RAP1B | 12 | + | DPT | | - |
| exon-exon | DHRS7B | 17 | + | PKHD1 | 6 | - |
| exon-exon | PRRG4 | 11 | + | ZNF215 | 11 | + |
| exon-exon | MARCHF6 | 5 | + | GALNT18 | | - |
| exon-exon | GAS5 | 1 | - | ACP6 | | - |
| exon-exon | EIF3M | 11 | + | UEVLD | 11 | - |
| exon-exon | DENND1B | | - | TSPAN31 | 12 | + |
| exon-exon | DCAF8 | 1 | - | CD1C | 1 | + |
| exon-exon | CTDSP2 | 12 | - | RALB | 2 | + |
| exon-exon | CPM | 12 | - | CCT2 | 12 | + |
| exon-exon | ATP1A1 | 1 | + | SLC22A15 | | + |
| exon-exon | CFH | 1 | + | ASPM | | - |
| exon-exon | SFMBT1 | 3 | - | CAMK4 | 5 | + |
| exon-exon | ARHGEF3 | 3 | - | SNX24 | 5 | + |
| exon-exon | CWC25 | 17 | - | PLXDC1 | 17 | - |
| exon-exon | MCC | 5 | - | PXK | 3 | + |
| exon-exon | MOK | 14 | - | CINP | | - |
| exon-exon | RBM25 | 14 | + | SRP9P1 | 10 | - |
| exon-exon | RAB31 | 18 | + | PIEZO2 | 18 | - |
| exon-exon | CD83 | 6 | + | JARID2 | | + |
| exon-exon | STAMBPL1 | 10 | + | CHUK | 10 | - |
| exon-exon | EPHB2 | 1 | + | MDS2 | 1 | + |
| exon-exon | PUS1 | | + | GALNT9 | | - |
| exon-exon | DYNC1LI2 | 16 | - | ZNF610 | 19 | + |
| exon-exon | BTBD9 | 6 | - | GCLC | 6 | - |
| exon-exon | RERE | 1 | - | PEX10 | | - |
| exon-exon | NUMB | 14 | - | HEATR4 | 14 | - |
| exon-exon | PIM3 | 22 | + | SCO2 | 22 | - |
| exon-exon | RBM6 | 3 | + | BCL6 | 3 | - |
| exon-exon | AQR | 15 | - | ZNF770 | | - |
| exon-exon | ARHGAP24 | 4 | + | NENF | | + |
| exon-exon | SETD2 | 3 | - | CD58 | 1 | - |
| exon-exon | PCGF3 | 4 | + | TACC3 | 4 | + |
| exon-exon | RCC1 | 1 | + | ZNF217 | 20 | - |
| exon-exon | ARL6IP6 | 2 | + | CFLAR | 2 | + |
| exon-exon | MTAP | 9 | + | MTMR6 | 13 | - |
| exon-exon | ANKRD44 | 2 | - | ABCB10 | | - |
| exon-exon | CTDSP1 | | + | DNM3OS | | - |
| exon-exon | CIITA | 16 | + | DLG2 | 11 | - |
| exon-exon | ZNF407 | 18 | + | EPSTI1 | 13 | - |
| exon-exon | CCDC83 | | + | PICALM | 11 | - |
| exon-exon | ACOT7 | 1 | - | NPHP4 | 1 | - |
| exon-exon | SLC7A1 | | - | ZNF608 | 5 | - |
| exon-exon | SMAD2 | 18 | - | PARD6G | | - |
| exon-exon | AP1S3 | 2 | - | MAPK4 | | + |
| exon-exon | TMF1 | 3 | - | UBA3 | 3 | - |
| exon-exon | MAPK1 | 22 | - | CDKN1A | 6 | + |
| exon-exon | GPR160 | 3 | + | PLSCR1 | 3 | - |
| exon-exon | CBLB | 3 | - | BCL6 | 3 | - |
| exon-exon | ZDHHC20 | 13 | - | SNTA1 | 20 | - |
| exon-exon | WDR43 | 2 | + | PPP1CB | 2 | + |
| exon-exon | USP34 | 2 | - | XPO1 | 2 | - |
| exon-exon | UBAP2 | 9 | - | DCAF12 | | - |
| exon-exon | TTF2 | 1 | + | CD101 | | + |
| exon-exon | TRAF3IP2 | 6 | - | FYN | 6 | - |
| exon-exon | TIPRL | 1 | + | DCAF6 | 1 | + |
| exon-exon | UBQLN4P1 | | - | ITPR3 | 6 | + |
| exon-exon | TAOK1 | 17 | + | NLK | 17 | + |
| exon-exon | STK24 | 13 | - | SLC15A1 | | - |
| exon-exon | STAT3 | 17 | - | CAVIN1 | 17 | - |
| exon-exon | SMCHD1 | | + | NDC80 | 18 | + |
| exon-exon | SLU7 | 5 | - | ATP10B | | - |
| exon-exon | SH2B2 | | + | CUX1 | 7 | + |
| exon-exon | SENP7 | 3 | - | ZBTB11 | 3 | - |
| exon-exon | SCYL2 | 12 | + | DEPDC4 | 12 | - |
| exon-exon | SAFB2 | 19 | - | INSR | 19 | - |
| exon-exon | TESC | 12 | - | FBXO21 | 12 | - |
| exon-exon | PXDNL | | - | PCMTD1 | 8 | - |
| exon-exon | HACD2 | 3 | - | MYLK | 3 | - |
| exon-exon | PGS1 | 17 | + | AFMID | 17 | + |
| exon-exon | NSMAF | 8 | - | TOX | | - |
| exon-exon | NOTCH1 | 9 | - | LCN15 | | - |
| exon-exon | NEMF | 14 | - | SOS2 | 14 | - |
| exon-exon | NCEH1 | 3 | - | SPATA16 | | - |
| exon-exon | ETFRF1 | 12 | + | IRAG2 | 12 | + |
| exon-exon | LSS | 21 | - | MCM3AP | 21 | - |
| exon-exon | TATDN1 | | - | DEPTOR | 8 | + |
| exon-exon | LHFPL2 | 5 | - | ARSB | 5 | - |
| exon-exon | KDM2B | 12 | - | MORN3 | | - |
| exon-exon | INPP5F | | + | BAG3 | 10 | + |
| exon-exon | IKZF1 | 7 | + | VWC2 | | + |
| exon-exon | CPD | 17 | + | EFCAB5 | 17 | + |
| exon-exon | CCDC12 | 3 | - | KIF9 | 3 | - |
| exon-exon | ATP2A3 | | - | ANKFY1 | 17 | - |
| exon-exon | ASH1L | 1 | - | ARHGEF11 | 1 | - |
| exon-exon | ANKRD11 | 16 | - | VPS9D1 | 16 | - |
| exon-exon | PTK2 | 8 | - | TSNARE1 | 8 | - |
| exon-exon | GNA13 | 17 | - | ALPK2 | | - |
| exon-exon | PPP6R2 | 22 | + | SCO2 | 22 | - |
| exon-exon | BSG | 19 | + | CDC34 | | + |
| exon-exon | ZNF292 | 6 | + | TIAM2 | 6 | + |
| exon-exon | NFIX | 19 | + | MAST1 | | + |
| exon-exon | PITPNC1 | 17 | + | THRA1/BTR | | + |
| exon-exon | PIM3 | 22 | + | CRELD2 | | + |
| exon-exon | TNFRSF10D | | - | MAN1B1 | | + |
| exon-exon | SMYD3 | 1 | - | EFCAB2 | 1 | + |
| exon-exon | RTF1 | 15 | + | RPAP1 | 15 | - |
| exon-exon | ACAP2 | | - | DLG1 | 3 | - |
| exon-exon | VPS13B | 8 | + | OXR1 | 8 | + |
| exon-exon | FGFR2 | 10 | - | COL14A1 | 8 | + |
| exon-exon | TAF2 | 8 | - | SAMD12 | 8 | - |
| exon-exon | CAPZA2 | | + | CADPS2 | 7 | - |
| exon-exon | RNF38 | 9 | - | PDCD1LG2 | 9 | + |
| exon-exon | ATAD2B | 2 | - | NGEF | 2 | - |
| exon-exon | UBA6 | 4 | - | PARM1 | 4 | + |
| exon-exon | TRIP12 | 2 | - | DIRC3 | | - |
| exon-exon | MBNL1 | 3 | + | SLC41A3 | 3 | - |
| exon-exon | FAM193A | 4 | + | MSANTD1 | | + |
| exon-exon | CACNA2D3 | | + | CACNA1D | | + |
| exon-exon | POLR1A | 2 | - | REEP1 | 2 | - |
| exon-exon | ABI3 | | + | TSPOAP1 | 17 | - |
| exon-exon | DGKH | 13 | + | HEPACAM | | - |
| exon-exon | CUL5 | 11 | + | BBOX1 | | + |
| exon-exon | TOX | 8 | - | EYA1 | 8 | - |
| exon-exon | SWAP70 | 11 | + | ZNF143 | 11 | + |
| exon-exon | BCL6 | 3 | - | IGHE | 14 | - |
| exon-exon | ZNF804A | 2 | + | PDE1A | 2 | - |
| exon-exon | NDUFAF5 | 20 | + | TMEM106C | 12 | + |
| exon-exon | TRAK1 | 3 | + | TEX264 | 3 | + |
| exon-exon | ZC3H11A | 1 | + | ATP2B4 | 1 | + |
| exon-exon | FHIT | 3 | - | CADPS | 3 | - |
| exon-exon | CHD7 | | + | SNAP23 | 15 | + |
| exon-exon | PRTFDC1 | 10 | - | GPR158-AS1 | | - |
| exon-exon | ARL5B | 10 | + | NSUN6 | 10 | - |
| exon-exon | RBPMS | 8 | + | MET | 7 | + |
| exon-exon | IARS2 | | + | DCAF17 | | + |
| exon-exon | TRIB3 | 20 | + | DEFB129 | | + |
| exon-exon | BUD23 | 7 | + | SEMA3A | | - |
| exon-exon | MICOS13 | 19 | - | MLLT6 | 17 | + |
| exon-exon | FAXC | 6 | - | PDE4B | 1 | + |
| exon-exon | PPP6R3 | 11 | + | APLP2 | 11 | + |
| exon-exon | ZNF586 | 19 | + | HCST | | + |
| exon-exon | SUCLA2 | 13 | - | TINAG | | + |
| exon-exon | PAN3 | 13 | + | FNDC3A | 13 | + |
| exon-exon | MZF1 | | - | TRIM28 | 19 | + |
| exon-exon | DYRK1B | 19 | - | GAPDHS | | + |
| exon-exon | CD2AP | | + | ANKFN1 | | + |
| exon-exon | SAMD12 | 8 | - | TMEM74 | | - |
| exon-exon | PVT1 | 8 | + | COL14A1 | 8 | + |
| exon-exon | TATDN1 | | - | MTSS1 | 8 | - |
| exon-exon | HLTF | 3 | - | IQCJ-SCHIP1 | 3 | + |
| exon-exon | GRTP1 | 13 | - | LINC01986 | | + |
| exon-exon | HDAC4 | 2 | - | GAS8 | 16 | + |
| exon-exon | FGFR2 | 10 | - | KRT8 | 12 | - |
| exon-exon | LMBRD1 | | - | GLO1 | 6 | - |
| exon-exon | DNAJC11 | 1 | - | CAMTA1 | 1 | + |
| exon-exon | CHD8 | 14 | - | DNAJC11 | 1 | - |
| exon-exon | SH3BGRL2 | | + | EYS | 6 | - |
| exon-exon | EYS | 6 | - | FILIP1 | 6 | - |
| exon-exon | NPLOC4 | 17 | - | PDE6G | | - |
| exon-exon | ARHGAP35 | 19 | + | CRX | | + |
| exon-exon | ZFPL1 | | + | SART1 | 11 | + |
| exon-exon | TBRG1 | 11 | + | IFT46 | 11 | - |
| exon-exon | USP34 | 2 | - | XPO1 | 2 | - |
| exon-exon | SOGA1 | | - | SAMHD1 | 20 | - |
| exon-exon | PSMA3 | 14 | + | ACTR10 | 14 | + |
| exon-exon | KIF1C | 17 | + | RNF167 | 17 | + |
| exon-exon | CPB2 | 13 | - | LCP1 | 13 | - |
| exon-exon | BCL7B | 7 | - | TNFRSF12A | 16 | + |
| exon-exon | MTSS1 | 8 | - | FGFR2 | 10 | - |
| exon-exon | RBPMS | 8 | + | PAK5 | 20 | - |
| exon-exon | TYK2 | 19 | - | DOCK6 | 19 | - |
| exon-exon | TJAP1 | 6 | + | KLC4 | 6 | + |
| exon-exon | COX6B1 | 19 | + | CEP89 | | - |
| exon-exon | YIPF7 | 4 | - | ADRA1A | | - |
| exon-exon | WNK1 | 12 | + | SH2B3 | 12 | + |
| exon-exon | UBR3 | 2 | + | SSB | 2 | + |
| exon-exon | TNKS1BP1 | 11 | - | PAX7 | | + |
| exon-exon | TMEM120B | | + | UBR4 | 1 | - |
| exon-exon | MTSS1 | 8 | - | ATE1 | 10 | - |
| exon-exon | TCF7L1 | 2 | + | ODF2 | 9 | + |
| exon-exon | SREBF1 | 17 | - | TOM1L2 | 17 | - |
| exon-exon | SLC9B2 | 4 | - | CENPE | 4 | - |
| exon-exon | SERPINA6 | | - | GCH1 | 14 | - |
| exon-exon | PPARD | 6 | + | ANKS1A | 6 | + |
| exon-exon | PELP1 | 17 | - | SPAG7 | 17 | - |
| exon-exon | TENT4B | 16 | + | HEATR3 | 16 | + |
| exon-exon | MTFR1 | | + | YIPF7 | 4 | - |
| exon-exon | LRRC8A | 9 | + | DNAH6 | | + |
| exon-exon | HNRNPM | 19 | + | RFX2 | 19 | - |
| exon-exon | ANXA5 | 4 | - | INO80C | | - |
| exon-exon | GTF2I | 7 | + | GTF2IRD1 | | + |
| exon-exon | CPT1A | 11 | - | KRT8 | 12 | - |
| exon-exon | CPN1 | 10 | - | PKD2L1 | 10 | - |
| exon-exon | CAMK2G | 10 | - | FAM102A | 9 | - |
| exon-exon | C8B | | - | PAH | | - |
| exon-exon | ASGR2 | 17 | - | NDEL1 | 17 | + |
| exon-exon | ADRA1A | | - | YIPF7 | 4 | - |
| exon-exon | PRDM2 | 1 | + | FBLIM1 | 1 | + |
| exon-exon | SLC30A9 | 4 | + | COX7B2 | | - |
| exon-exon | SIKE1 | 1 | - | FAF1 | 1 | - |
| exon-exon | TMEM216 | | + | TMEM138 | 11 | + |
| exon-exon | AFP | 4 | + | ALB | 4 | + |
| exon-exon | ZNF652 | 17 | - | PHB | 17 | - |
| exon-exon | TNK2 | 3 | - | TRA2B | 3 | - |
| exon-exon | RNF168 | 3 | - | TNIK | 3 | - |
| exon-exon | CCDC50 | 3 | + | PEX5L | 3 | - |
| exon-exon | KDELR1 | 19 | - | SULT2B1 | | + |
| exon-exon | ELL | 19 | - | PBX4 | 19 | - |
| exon-exon | PRKCE | 2 | + | RTN4 | 2 | - |
| exon-exon | ACVR2A | | + | PIGF | | - |
| exon-exon | NUGGC | | - | PURG | 8 | - |
| exon-exon | EXTL3 | | + | RBPMS | 8 | + |
| exon-exon | ESCO1 | 18 | - | GREB1L | 18 | + |
| exon-exon | ELOC | | - | ASPH | 8 | - |
| exon-exon | EFR3A | | + | ATAD2 | 8 | - |
| exon-exon | EEF1D | 8 | - | STAU2 | 8 | - |
| exon-exon | WFDC2 | 20 | + | SCNN1G | | + |
| exon-exon | CTNNAL1 | 9 | - | EPB41L4B | | - |
| exon-exon | CCDC130 | 19 | + | SAFB2 | 19 | - |
| exon-exon | PI4KB | 1 | - | SH3D21 | 1 | + |
| exon-exon | HOOK3 | 8 | + | IKBKB | 8 | + |
| exon-exon | CNNM2 | 10 | + | SUFU | | + |
| exon-exon | TUT4 | 1 | - | LRP8 | | - |
| exon-exon | TSGA10 | 2 | - | LYG2 | | - |
| exon-exon | RALGAPB | | + | SCNN1G | | + |
| exon-exon | NEK9 | 14 | - | TRIM9 | 14 | - |
| exon-exon | MAP3K4 | 6 | + | PLG | 6 | + |
| exon-exon | TSC1 | 9 | - | DERL1 | 8 | - |
| exon-exon | RACGAP1 | | - | PYM1 | 12 | - |
| exon-exon | QKI | 6 | + | PACRG | 6 | + |
| exon-exon | DERL1 | 8 | - | TSC1 | 9 | - |
| exon-exon | APOA2 | 1 | - | VTN | 17 | - |
| exon-exon | LMBRD1 | | - | EYS | 6 | - |
| exon-exon | TSC2 | | + | RPS2 | 16 | - |
| exon-exon | NCL | 2 | - | SRRM1 | 1 | + |
| exon-exon | MLIP | | + | LRRC1 | | + |
| exon-exon | ENSA | 1 | - | ARNT | 1 | - |
| exon-exon | ALDH8A1 | | - | PPM1H | 12 | - |
| exon-exon | NFIC | 19 | + | SFRP1 | 8 | - |
| exon-exon | ZMYM2 | 13 | + | ZNF90 | 19 | + |
| exon-exon | BRD4 | 19 | - | ARMC6 | 19 | + |
| exon-exon | RAI14 | 5 | + | SCP2 | | + |
| exon-exon | PCCA | 13 | + | ZIC2 | | + |
| exon-exon | LPIN2 | | - | MYOM1 | | - |
| exon-exon | METTL16 | 17 | - | TXNDC17 | | + |
| exon-exon | KIAA1109 | 4 | + | CCNA2 | 4 | - |
| exon-exon | CLIC4 | 1 | + | ARFGAP3 | 22 | - |
| exon-exon | RHPN2 | 19 | - | SLC7A10 | | - |
| exon-exon | PTPN23 | 3 | + | CCDC14 | 3 | - |
| exon-exon | KIAA0319L | 1 | - | CIB2 | | - |
| exon-exon | LNPEP | 5 | + | GPBP1 | 5 | + |
| exon-exon | KLF12 | 13 | - | SMIM2-AS1 | 13 | + |
| exon-exon | RNF138 | | + | MCM3AP | 21 | - |
| exon-exon | ST7 | 7 | + | CAPZA2 | 7 | + |
| exon-exon | CMC1 | 3 | + | WDR72 | | - |
| exon-exon | BAALC | 8 | + | EIF3E | 8 | - |
| exon-exon | PPARA | 22 | + | SLC16A7 | | + |
| exon-exon | SEC61G | | - | EGFR | 7 | + |
| exon-exon | NQO1 | 16 | - | TBRG4 | 7 | - |
| exon-exon | LANCL2 | | + | SEPTIN14 | | - |
| exon-exon | CRTC1 | 19 | + | KLHL26 | | + |
| exon-exon | PTBP1 | 19 | + | PALM | 19 | + |
| exon-exon | SNX29 | 16 | + | LITAF | 16 | - |
| exon-exon | SERTAD2 | | - | DEFB124 | 20 | - |
| exon-exon | PPP1R12A | 12 | - | EIF2S3B | 12 | + |
| exon-exon | ASH1L | 1 | - | ZNF687 | 1 | + |
| exon-exon | KDM2B | 12 | - | AFF4 | 5 | - |
| exon-exon | LRRC28 | 15 | + | IQCH | 15 | + |
| exon-exon | AFF4 | 5 | - | KDM2B | 12 | - |
| exon-exon | SKAP2 | 7 | - | LOC646588 | | - |
| exon-exon | SRSF1 | 17 | - | DDX5 | 17 | - |
| exon-exon | HNRNPH1 | 5 | - | DDX5 | 17 | - |
| exon-exon | HNRNPA2B1 | 7 | - | DDX5 | 17 | - |
| exon-exon | CXCR4 | 2 | - | GNAS | 20 | + |
| exon-exon | LRIG2 | | + | CHIA | | + |
| exon-exon | DLEU2 | 13 | - | SOS1 | 2 | - |
| exon-exon | DNAJC15 | 13 | + | RNASEH2B | 13 | + |
| exon-exon | KIF1C | 17 | + | DNAH2 | 17 | + |
| exon-exon | GPATCH8 | 17 | - | TP53BP1 | 15 | - |
| exon-exon | KLF12 | 13 | - | MED4 | 13 | - |
| exon-exon | UBA2 | 19 | + | GPI | 19 | + |
| exon-exon | TALDO1 | 11 | + | EPS8L2 | 11 | + |
| exon-exon | PCBP2 | 12 | + | AMHR2 | | + |
| exon-exon | FXR1 | 3 | + | NAALADL2 | 3 | + |
| exon-exon | SHPRH | | - | NDUFS5 | | + |
| exon-exon | DPP9 | 19 | - | ADRM1 | 20 | + |
| exon-exon | GGNBP2 | 17 | + | ZMAT4 | 8 | - |
| exon-exon | DHRS2 | 14 | + | GSTM2 | 1 | + |
| exon-exon | RAB11FIP1 | 8 | - | KCNU1 | | + |
| exon-exon | ADGRA2 | 8 | + | GSR | 8 | - |
| exon-exon | NECTIN4 | | - | PFDN2 | 1 | - |
| exon-exon | ZNF248 | | - | FAM107B | 10 | - |
| exon-exon | VPS13B | 8 | + | MYO9B | 19 | + |
| exon-exon | METTL16 | 17 | - | VPS53 | 17 | - |
| exon-exon | LINC00482 | | - | SERINC2 | 1 | + |
| exon-exon | KATNBL1 | 15 | - | TP53BP1 | 15 | - |
| exon-exon | ERBB2 | 17 | + | CTTN | 11 | + |
| exon-exon | POLE | 12 | - | ANKS1B | 12 | - |
| exon-exon | RFX7 | 15 | - | LIPC | 15 | + |
| exon-exon | PTPN14 | 1 | - | NSL1 | 1 | - |
| exon-exon | BCL11B | 14 | - | MIPOL1 | 14 | + |
| exon-exon | AP1B1 | 22 | - | GRK3 | | + |
| exon-exon | GRK3 | 22 | + | AP1B1 | 22 | - |
| exon-exon | RCOR1 | | + | TECPR2 | 14 | + |
| exon-exon | MYO9A | 15 | - | CELF6 | 15 | - |
| exon-exon | TNC | 9 | - | HNRNPUL1 | 19 | + |
| exon-exon | DGUOK | 2 | + | ACTG2 | 2 | + |
| exon-exon | WDR62 | | + | HCST | | + |
| exon-exon | FAM13C | 10 | - | ZNF365 | 10 | + |
| exon-exon | VAC14 | 16 | - | WWOX | 16 | + |
| exon-exon | UBE4B | 1 | + | ZNF536 | 19 | + |
| exon-exon | ITCH | | + | AHCY | 20 | - |
| exon-exon | EPN2 | | + | KCNJ12 | | + |
| exon-exon | SEMA3A | | - | ARFGEF2 | 20 | + |
| exon-exon | B3GLCT | | + | TEX26 | | + |
| exon-exon | ACKR2 | 3 | + | POMGNT2 | | - |
| exon-exon | OPA3 | 19 | - | RDH8 | | + |
| exon-exon | TMEM123 | 11 | - | MMP20 | | - |
| exon-exon | SPTAN1 | 9 | + | SLC27A4 | 9 | + |
| exon-exon | SLC7A1 | | - | RSPH9 | 6 | + |
| exon-exon | RFT1 | 3 | - | KIF9-AS1 | 3 | + |
| exon-exon | PRKCD | 3 | + | KIF9 | 3 | - |
| exon-exon | METTL24 | | - | SLC22A16 | | - |
| exon-exon | SGSH | 17 | - | EHBP1 | 2 | + |
| exon-exon | MED25 | | + | TRPM4 | 19 | + |
| exon-exon | DDX46 | 5 | + | CAMLG | 5 | + |
| exon-exon | CHD2 | 15 | + | PDXK | 21 | + |
| exon-exon | UBR5 | 8 | - | DRD4 | 11 | + |
| exon-exon | NT5C2 | 10 | - | ATP5MD | 10 | - |
| exon-exon | MTMR3 | 22 | + | HEXIM2 | | + |
| exon-exon | ZNF433-AS1 | 19 | + | DNM2 | 19 | + |
| exon-exon | CPNE2 | 16 | + | NUP93 | 16 | + |
| exon-exon | ADAM9 | 8 | + | KCNU1 | | + |
| exon-exon | ZNF3 | 7 | - | ACTL6B | | - |
| exon-exon | DNAH14 | 1 | + | IRAK1 | X | - |
| exon-exon | JUP | 17 | - | CAMTA2 | 17 | - |
| exon-exon | EPS8L2 | 11 | + | B4GALNT4 | | + |
| exon-exon | CTNNA1 | 5 | + | MGME1 | | + |
| exon-exon | ITGAV | 2 | + | TRIR | | - |
| exon-exon | UBE2O | 17 | - | SRSF2 | 17 | - |
| exon-exon | TRAPPC9 | 8 | - | TSNARE1 | 8 | - |
| exon-exon | PSMD3 | 17 | + | CDK12 | 17 | + |
| exon-exon | NPLOC4 | 17 | - | SIRT7 | | - |
| exon-exon | NCOA3 | 20 | + | EYA2 | 20 | + |
| exon-exon | CDH4 | | + | NME1-NME2 | 17 | + |
| exon-exon | PRRC2B | 9 | + | PITPNC1 | 17 | + |
| exon-exon | PPP6R2 | 22 | + | MPV17 | 2 | - |
| exon-exon | AHDC1 | 1 | - | NUP214 | 9 | + |
| exon-exon | XPR1 | 1 | + | OVAAL | | + |
| exon-exon | SOGA1 | | - | MROH8 | 20 | - |
| exon-exon | S100PBP | | + | RBBP4 | 1 | + |
| exon-exon | PTDSS2 | | + | IFITM2 | 11 | + |
| exon-exon | CDC27 | 17 | - | FN1 | 2 | - |
| exon-exon | PPP6R3 | 11 | + | LRP5 | 11 | + |
| exon-exon | PHF12 | 17 | - | SEZ6 | 17 | - |
| exon-exon | FAM222B | 17 | - | CAT | 11 | + |
| exon-exon | PRXL2A | 10 | + | DYDC2 | | + |
| exon-exon | DYNLRB1 | 20 | + | ARCN1 | 11 | + |
| exon-exon | DPP9 | 19 | - | PTPRS | 19 | - |
| exon-exon | DLG4 | | - | SHBG | | + |
| exon-exon | CDC25C | 5 | - | ETF1 | 5 | - |
| exon-exon | ASAP2 | 2 | + | ERI3 | | - |
| exon-exon | KMT5B | 11 | - | C11orf24 | 11 | - |
| exon-exon | C12orf73 | 12 | - | NEK6 | 9 | + |
| exon-exon | RPS6KB1 | 17 | + | VMP1 | 17 | + |
| exon-exon | GDPD5 | 11 | - | WNT11 | | - |
| exon-exon | TNRC18 | 7 | - | RNF216 | 7 | - |
| exon-exon | RAB11FIP3 | 16 | + | SLMAP | 3 | + |
| exon-exon | ODF2 | 9 | + | SLC27A4 | 9 | + |
| exon-exon | MYO9A | 15 | - | PKM | 15 | - |
| exon-exon | MAP4K5 | 14 | - | PYGL | 14 | - |
| exon-exon | FLNB | 3 | + | FGR | 1 | - |
| exon-exon | WWC2 | 4 | + | TENM3 | 4 | + |
| exon-exon | FAM102A | 9 | - | PTGES2 | 9 | - |
| exon-exon | MIDEAS | 14 | - | FAM161B | 14 | - |
| exon-exon | CERK | | - | CCNL2 | 1 | - |
| exon-exon | QRICH1 | 3 | - | SHISA5 | 3 | - |
| exon-exon | NSUN5 | 7 | - | BCL7B | 7 | - |
| exon-exon | GADD45GIP1 | 19 | - | CSTF1 | 20 | + |
| exon-exon | FMNL2 | 2 | + | GPBAR1 | | + |
| exon-exon | ABTB2 | 11 | - | APIP | | - |
| exon-exon | RPF1 | 1 | + | GNG5 | 1 | - |
| exon-exon | SKAP1 | 17 | - | HLA-DPB1 | 6 | + |
| exon-exon | RHNO1 | 12 | + | ITFG2 | 12 | + |
| exon-exon | ITPR3 | 6 | + | ZBTB17 | 1 | - |
| exon-exon | CBFA2T2 | | + | DCTN3 | | - |
| exon-exon | KMT2E | 7 | + | LHFPL3 | 7 | + |
| exon-exon | CALD1 | 7 | + | AKR1B10 | 7 | + |
| exon-exon | VPS11 | | + | ATP5MG | 11 | + |
| exon-exon | SCNN1A | 12 | - | LPAR5 | | - |
| exon-exon | REV3L | 6 | - | FYN | 6 | - |
| exon-exon | KCTD13 | | - | QPRT | | + |
| exon-exon | BAIAP2 | 17 | + | SPECC1L-ADORA2A | | + |
| exon-exon | THEM4 | | - | S100A10 | 1 | - |
| exon-exon | PHYHIPL | 10 | + | LINC00844 | | + |
| exon-exon | MET | 7 | + | CAV1 | 7 | + |
| exon-exon | KLC1 | 14 | + | MARK3 | 14 | + |
| exon-exon | ASRGL1 | 11 | + | CPSF7 | 11 | - |
| exon-exon | AP2A2 | 11 | + | VPS26A | 10 | + |
| exon-exon | PRKAB2 | 1 | - | HNRNPLL | 2 | - |
| exon-exon | XPR1 | 1 | + | MSMP | | - |
| exon-exon | CUTA | 6 | - | GRM4 | 6 | - |
| exon-exon | POLR2B | 4 | + | FIP1L1 | 4 | + |
| exon-exon | DLG3 | X | + | UNC5D | | + |
| exon-exon | ANKRD11 | 16 | - | CHMP1A | 16 | - |
| exon-exon | SLC25A13 | 7 | - | SEM1 | 7 | - |
| exon-exon | DNM2 | 19 | + | ILF3 | 19 | + |
| exon-exon | BAIAP2L1 | | - | BCAS4 | 20 | + |
| exon-exon | ADGRG6 | 6 | + | VTA1 | | + |
| exon-exon | ATE1 | 10 | - | NSMCE4A | 10 | - |
| exon-exon | MFHAS1 | 8 | - | LOC105374659 | | + |
| exon-exon | MAP4 | 3 | - | DHX30 | 3 | + |
| exon-exon | LRWD1 | | + | CCDC107 | 9 | + |
| exon-exon | SASH1 | | + | GPLD1 | 6 | - |
| exon-exon | MSH2 | 2 | + | M1AP | | - |
| exon-exon | FOXJ3 | 1 | - | EVL | 14 | + |
| exon-exon | DAZAP1 | 19 | + | ARHGAP45 | 19 | + |
| exon-exon | AARS1 | 16 | - | LOC100506083 | | - |
| exon-exon | GNB2 | 7 | + | RPS4X | X | - |
| exon-exon | RBM6 | 3 | + | P4HA2 | 5 | - |
| exon-exon | GPATCH1 | 19 | + | UPK1B | 3 | + |
| exon-exon | VPS35L | 16 | + | SYT17 | 16 | + |
| exon-exon | TPD52 | 8 | - | ZNF704 | 8 | - |
| exon-exon | RPAP1 | 15 | - | TMEM87A | 15 | - |
| exon-exon | P4HA1 | 10 | - | LAMA3 | 18 | + |
| exon-exon | NUP205 | 7 | + | ASH1L | 1 | - |
| exon-exon | MEST | 7 | + | CKS1B | 1 | + |
| exon-exon | LRCH1 | 13 | + | LINC02240 | 5 | + |
| exon-exon | DDI2 | 1 | + | EFHD2 | | + |
| exon-exon | AGO2 | 8 | - | PTK2 | 8 | - |
| exon-exon | PXK | | + | TTC7A | 2 | + |
| exon-exon | PIGS | | - | LOC105372725 | | + |
| exon-exon | GTF2I | 7 | + | GTF2IRD1 | | + |
| exon-exon | TMEM123 | 11 | - | MMP8 | | - |
| exon-exon | FBXL19 | 16 | + | C16orf71 | | + |
| exon-exon | SHROOM4 | X | - | ARID3A | | + |
| exon-exon | CTNNA3 | 10 | - | HERC4 | 10 | - |
| exon-exon | FAM172A | 5 | - | NR2F1-AS1 | 5 | - |
| exon-exon | XRCC2 | | - | WASL | 7 | - |
| exon-exon | RNF38 | 9 | - | LCE5A | | + |
| exon-exon | MVB12B | 9 | + | MAMDC2 | 9 | + |
| exon-exon | GPATCH11 | | + | DYM | 18 | - |
| exon-exon | DNM1L | 12 | + | BICD1 | 12 | + |
| exon-exon | FARS2 | 6 | + | SYCP2L | 6 | + |
| exon-exon | VPS13C | 15 | - | LINC00593 | | + |
| exon-exon | CCN2 | 6 | - | RPL6 | 12 | - |
| exon-exon | SPTY2D1 | | - | SERGEF | 11 | - |
| exon-exon | SEC11A | 15 | - | VPS33B | 15 | - |
| exon-exon | PDE8A | 15 | + | SLCO3A1 | 15 | + |
| exon-exon | NAALADL2 | 3 | + | VPS13C | 15 | - |
| exon-exon | RPRD2 | 1 | + | PRPF3 | 1 | + |
| exon-exon | POGZ | 1 | - | HHIPL2 | | - |
| exon-exon | MEF2A | 15 | + | WDR61 | 15 | - |
| exon-exon | ERBIN | 5 | + | ARL15 | 5 | - |
| exon-exon | PXDC1 | 6 | - | NCKAP5-AS2 | 2 | + |
| exon-exon | CNN2 | 19 | + | MED16 | 19 | - |
| exon-exon | HPN-AS1 | 19 | - | LGI4 | 19 | - |
| exon-exon | CDC27 | 17 | - | BRAF | 7 | - |
| exon-exon | CALD1 | 7 | + | SLC41A1 | 1 | - |
| exon-exon | ZNF57 | | + | NANOS3 | | + |
| exon-exon | ZNF136 | | + | XAB2 | 19 | - |
| exon-exon | FZR1 | | + | MAN2B1 | 19 | - |
| exon-exon | DST | 6 | - | MLIP | 6 | + |
| exon-exon | CFAP69 | 7 | + | STEAP1 | 7 | + |
| exon-exon | SH3D19 | 4 | - | INPP4B | 4 | - |
| exon-exon | PPP6R2 | 22 | + | TRABD | 22 | + |
| exon-exon | INPP5F | | + | GRK5 | 10 | + |
| exon-exon | CEP170 | 1 | - | AKT3 | 1 | - |
| exon-exon | CD55 | 1 | + | CENPL | 1 | - |
| exon-exon | AHCTF1 | 1 | - | SMYD3 | 1 | - |
| exon-exon | ADSS2 | 1 | - | BPNT1 | 1 | - |
| exon-exon | ZDHHC21 | 9 | - | PHGDH | 1 | + |
| exon-exon | ATP2A2 | 12 | + | IFT81 | | + |
| exon-exon | RECK | 9 | + | ACER3 | 11 | + |
| exon-exon | PPFIA1 | 11 | + | TSKU | 11 | + |
| exon-exon | NDUFS4 | 5 | + | HMGCR | 5 | + |
| exon-exon | CERT1 | | - | ELOVL7 | 5 | - |
| exon-exon | CLPB | 11 | - | KIAA2026 | 9 | - |
| exon-exon | ZNF79 | 9 | + | SLC2A8 | 9 | + |
| exon-exon | CLCN6 | 1 | + | RAF1 | 3 | - |
| exon-exon | TRAK1 | 3 | + | RAF1 | 3 | - |
| exon-exon | RAF1 | 3 | - | TRAK1 | 3 | + |
| exon-exon | TRAPPC9 | 8 | - | KCNK9 | | - |
| exon-exon | NIPBL | | + | SPEF2 | | + |
| exon-exon | HDAC4 | 2 | - | PDE11A | | - |
| exon-exon | GFOD2 | | - | TRIO | 5 | + |
| exon-exon | FMNL3 | 12 | - | CPNE8 | 12 | - |
| exon-exon | ANKRD44 | 2 | - | LINC01473 | 2 | - |
| exon-exon | IREB2 | 15 | + | DIAPH3 | 13 | - |
| exon-exon | ZNF814 | 19 | - | EIF3B | 7 | + |
| exon-exon | TMTC2 | 12 | + | METTL25 | | + |
| exon-exon | SLC3A2 | 11 | + | GRAP2 | 22 | + |
| exon-exon | SIPA1L3 | 19 | + | CEP89 | | - |
| exon-exon | SBF1 | 22 | - | TENM4 | 11 | - |
| exon-exon | RNF157 | 17 | - | CA10 | | - |
| exon-exon | PTK2 | 8 | - | TRAPPC9 | 8 | - |
| exon-exon | MBTD1 | | - | PART1 | 5 | + |
| exon-exon | GRAP2 | 22 | + | BRD1 | 22 | - |
| exon-exon | FAM222B | 17 | - | CRLF3 | 17 | - |
| exon-exon | ADAM9 | 8 | + | SSPN | 12 | + |
| exon-exon | TBC1D23 | | + | CMSS1 | 3 | + |
| exon-exon | CHIC2 | 4 | - | SIPA1L3 | 19 | + |
| exon-exon | APPBP2 | | - | CA10 | | - |
| exon-exon | ANKRD11 | 16 | - | CPNE7 | 16 | + |
| exon-exon | USP10 | 16 | + | ATP2C2 | 16 | + |
| exon-exon | RIMKLB | 12 | + | ELP3 | | + |
| exon-exon | SPTAN1 | 9 | + | MAPKAP1 | | - |
| exon-exon | PTPRG | 3 | + | SYNPR | | + |
| exon-exon | MVB12B | 9 | + | TG | 8 | + |
| exon-exon | RNGTT | 6 | - | AHI1 | 6 | - |
| exon-exon | PLEKHA5 | 12 | + | AEBP2 | 12 | + |
| exon-exon | RUNX1 | 21 | - | IFNAR1 | 21 | + |
| exon-exon | PEAK1 | 15 | - | PSTPIP1 | | + |
| exon-exon | NRCAM | 7 | - | SEM1 | 7 | - |
| exon-exon | NPTN | 15 | - | HMG20A | 15 | + |
| exon-exon | ISL2 | | + | PEAK1 | 15 | - |
| exon-exon | GFPT1 | | - | NFU1 | 2 | - |
| exon-exon | NFAT5 | 16 | + | DENND2C | | - |
| exon-exon | LRP12 | 8 | - | RALGPS1 | 9 | + |
| exon-exon | MLLT1 | 19 | - | SH3GL1 | 19 | - |
| exon-exon | AMBRA1 | 11 | - | HARBI1 | 11 | - |
| exon-exon | PDZD8 | 10 | - | ENO4 | 10 | + |
| exon-exon | OLMALINC | | + | CALCOCO2 | 17 | + |
| exon-exon | GRIN2B | | - | MANSC1 | | - |
| exon-exon | GRIN2B | | - | LOH12CR2 | | - |
| exon-exon | WDR45B | 17 | - | SPAG5-AS1 | 17 | + |
| exon-exon | ACSL5 | | + | TCF7L2 | 10 | + |
| exon-exon | KANSL1 | 17 | - | MAPT | 17 | + |
| exon-exon | TOX3 | 16 | - | CASC16 | | - |
| exon-exon | KPNA6 | 1 | + | TMEM39B | 1 | + |
| exon-exon | MAPKAPK5 | 12 | + | SMARCD1 | 12 | + |
| exon-exon | HECTD4 | 12 | - | PKP2 | 12 | - |
| exon-exon | BRI3BP | | + | MARS1 | 12 | + |
| exon-exon | BMPR2 | 2 | + | MARCHF4 | 2 | - |
| exon-exon | ACP3 | | + | SAFB2 | 19 | - |
| exon-exon | DLGAP1 | 18 | - | ARHGAP28 | 18 | + |
| exon-exon | TEAD1 | 11 | + | MICAL2 | 11 | + |
| exon-exon | TMPRSS2 | 21 | - | ERG | 21 | - |
| exon-exon | LEPR | 1 | + | SGIP1 | 1 | + |
| exon-exon | MINPP1 | | + | LIPJ | | + |
| exon-exon | CDYL2 | 16 | - | VEPH1 | 3 | - |
| exon-exon | AAK1 | 2 | - | KCMF1 | 2 | + |
| exon-exon | SCYL1 | 11 | + | RPS18 | 6 | + |
| exon-exon | TSC22D1 | 13 | - | NDUFS7 | 19 | + |
| exon-exon | SLC45A3 | 1 | - | ERG | 21 | - |
| exon-exon | RERE | 1 | - | OOEP | 6 | - |
| exon-exon | TMPRSS2 | 21 | - | ERG | 21 | - |
| exon-exon | SERINC5 | | - | TTC39A | | - |
| exon-exon | AFG3L2 | 18 | - | ETV4 | 17 | - |
| exon-exon | SEMA3D | 7 | - | RBM28 | 7 | - |
| exon-exon | APC | 5 | + | KIAA0825 | 5 | - |
| exon-exon | NF1 | 17 | + | RAB11FIP4 | 17 | + |
| exon-exon | TRIM33 | 1 | - | CSDE1 | 1 | - |
| exon-exon | PDE4D | 5 | - | DEPDC1B | 5 | - |
| exon-exon | ACSL3 | | + | SGPP2 | 2 | + |
| exon-exon | TMPRSS2 | 21 | - | ETV4 | 17 | - |
| exon-exon | INTS3 | 1 | + | CHTOP | 1 | + |
| exon-exon | EXOC4 | 7 | + | TRUB2 | 9 | - |
| exon-exon | COL23A1 | | - | FAM193B | 5 | - |
| exon-exon | LYAR | 4 | - | CTBP1 | 4 | - |
| exon-exon | TSPAN15 | 10 | + | HK1 | 10 | + |
| exon-exon | SLC24A3 | 20 | + | DSTN | 20 | + |
| exon-exon | NUDT19 | 19 | + | SLC7A9 | | - |
| exon-exon | DSTN | 20 | + | SLC24A3 | | + |
| exon-exon | PGK1 | X | + | ATP7A | X | + |
| exon-exon | ZBTB20 | 3 | - | CPNE4 | 3 | - |
| exon-exon | MNAT1 | 14 | + | L2HGDH | 14 | - |
| exon-exon | PPP1R3E | 14 | - | MYH6 | 14 | - |
| exon-exon | NUDCD1 | 8 | - | VWA8 | 13 | - |
| exon-exon | NUBPL | | + | DOCK2 | 5 | + |
| exon-exon | ITGB4 | 17 | + | SMIM6 | 17 | + |
| exon-exon | GRB10 | 7 | - | SCIN | 7 | + |
| exon-exon | CSMD2 | | - | FYB1 | 5 | - |
| exon-exon | FBLN1 | 22 | + | RIBC2 | 22 | + |
| exon-exon | BTBD7 | 14 | - | RGS9 | | + |
| exon-exon | EIF2A | 3 | + | ANKUB1 | 3 | - |
| exon-exon | ABCC4 | 13 | - | DNAJC3-DT | | - |
| exon-exon | ZSWIM4 | 19 | + | ZNF540 | 19 | + |
| exon-exon | ZSWIM4 | 19 | + | HSH2D | 19 | + |
| exon-exon | ZNF791 | 19 | + | ETHE1 | 19 | - |
| exon-exon | URI1 | 19 | + | XRCC1 | 19 | - |
| exon-exon | WWOX | 16 | + | VAT1L | 16 | + |
| exon-exon | CAV1 | 7 | + | MAST3 | 19 | + |
| exon-exon | PPP1R37 | | + | RHPN2 | 19 | - |
| exon-exon | PLD3 | 19 | + | CD79A | | + |
| exon-exon | PLAUR | | - | BABAM1 | 19 | + |
| exon-exon | MTPAP | 10 | - | ALKBH3 | 11 | + |
| exon-exon | LINC00665 | | - | ITGAM | 16 | + |
| exon-exon | HIP1 | 7 | - | STYXL1 | 7 | - |
| exon-exon | ATF7IP2 | 16 | + | STYXL1 | 7 | - |
| exon-exon | ATXN7 | 3 | + | THOC7 | | - |
| exon-exon | ANKRD11 | 16 | - | KLHL32 | 6 | + |
| exon-exon | ALDH9A1 | 1 | - | TMCO1 | 1 | - |
| exon-exon | TCF7L2 | 10 | + | VTI1A | 10 | + |
| exon-exon | RNF135 | | + | RAB11FIP4 | 17 | + |
| exon-exon | PLEKHA7 | 11 | - | SERGEF | 11 | - |
| exon-exon | PARD3 | 10 | - | CUL2 | 10 | - |
| exon-exon | MTMR3 | 22 | + | NF2 | 22 | + |
| exon-exon | FKBP8 | 19 | - | BORCS8-MEF2B | 19 | - |
| exon-exon | FBXW11 | 5 | - | STK10 | 5 | - |
| exon-exon | ZNF584 | 19 | + | IGLON5 | 19 | + |
| exon-exon | BIRC6 | 2 | + | BABAM2 | 2 | + |
| exon-exon | ZNF568 | | + | LOC105372441 | | + |
| exon-exon | WDR70 | 5 | + | EGFLAM-AS4 | | - |
| exon-exon | THRAP3 | 1 | + | AGO1 | 1 | + |
| exon-exon | RHPN2 | 19 | - | GRIN2D | | + |
| exon-exon | BRSK1 | 19 | + | COX6B1 | 19 | + |
| exon-exon | UTP18 | 17 | + | ITGB3 | 17 | + |
| exon-exon | GRIK4 | | + | SESN1 | 6 | - |
| exon-exon | TRAPPC9 | 8 | - | KCNK9 | | - |
| exon-exon | TNKS2 | 10 | + | HECTD2 | 10 | + |
| exon-exon | PRKCI | 3 | + | SAMD7 | | + |
| exon-exon | PPP2R2A | 8 | + | ZDHHC2 | 8 | + |
| exon-exon | PIN4 | X | + | LPCAT2 | 16 | + |
| exon-exon | NPAS3 | 14 | + | RB1 | 13 | + |
| exon-exon | ANKFY1 | 17 | - | SPINT2 | 19 | + |
| exon-exon | CREBBP | 16 | - | SRL | 16 | - |
| exon-exon | AFAP1 | 4 | - | KCNIP4 | 4 | - |
| exon-exon | UBE2C | 20 | + | DNTTIP1 | | + |
| exon-exon | GRAMD4 | | + | FBLN1 | 22 | + |
| exon-exon | FOXJ3 | 1 | - | SVBP | 1 | - |
| exon-exon | TESK2 | | - | IPP | | - |
| exon-exon | CDK13 | 7 | + | POU6F2 | 7 | + |
| exon-exon | ZMYM4 | | + | AP2S1 | 19 | - |
| exon-exon | USP34 | 2 | - | FAM178B | 2 | - |
| exon-exon | SCMH1 | 1 | - | TRAPPC3 | 1 | - |
| exon-exon | PRPF40B | 12 | + | EGFLAM-AS2 | | - |
| exon-exon | NECAP2 | 1 | + | EPHA2 | 1 | - |
| exon-exon | ERGIC1 | 5 | + | RANBP17 | 5 | + |
| exon-exon | CDH6 | 5 | + | SKP2 | 5 | + |
| exon-exon | TPD52L1 | | + | RNF217 | | + |
| exon-exon | SPINT2 | 19 | + | PPM1N | 19 | + |
| exon-exon | SFMBT2 | 10 | - | AKR1C4 | 10 | + |
| exon-exon | RRP12 | 10 | - | EXOSC1 | | - |
| exon-exon | ALDH3A1 | 17 | - | ULK2 | 17 | - |
| exon-exon | MARK3 | 14 | + | TDRD9 | 14 | + |
| exon-exon | ADAM9 | 8 | + | HTRA4 | | + |
| exon-exon | UBE2R2 | 9 | + | PRSS3 | | + |
| exon-exon | LRBA | 4 | - | SH3D19 | 4 | - |
| exon-exon | ZC3H3 | 8 | - | PYCR3 | 8 | - |
| exon-exon | SEMA4C | | - | FAM178B | 2 | - |
| exon-exon | SLC44A3 | 1 | + | ABCD3 | 1 | + |
| exon-exon | PTPN2 | 18 | - | FTL | 19 | + |
| exon-exon | PQBP1 | X | + | ERAS | | + |
| exon-exon | MAP3K5 | 6 | - | NKAIN2 | 6 | + |
| exon-exon | LATS1 | 6 | - | AFG1L | 6 | + |
| exon-exon | PTRH2 | 17 | - | RNFT1 | 17 | - |
| exon-exon | JUP | 17 | - | P3H4 | 17 | - |
| exon-exon | FRMD8 | | + | POLA2 | 11 | + |
| exon-exon | PPIL2 | 22 | + | UBE2L3 | 22 | + |
| exon-exon | TM9SF4 | 20 | + | HM13 | 20 | + |
| exon-exon | GPC1 | 2 | + | ANKFN1 | | + |
| exon-exon | ACTR2 | 2 | + | TSGA10 | | - |
| exon-exon | UBR1 | | - | TGM5 | | - |
| exon-exon | RTN4 | 2 | - | MITD1 | | - |
| exon-exon | PIK3CB | 3 | - | BFSP2 | | + |
| exon-exon | ESYT3 | | + | RPN1 | 3 | - |
| exon-exon | MBIP | | - | PCLO | 7 | - |
| exon-exon | CDC25A | | - | SPINK8 | | - |
| exon-exon | CCP110 | 16 | + | GOLPH3L | | - |
| exon-exon | ACYP2 | | + | PPP1CB | 2 | + |
| exon-exon | NFE2L2 | 2 | - | PDE11A | | - |
| exon-exon | PSD4 | | + | IL1RN | 2 | + |
| exon-exon | DSTN | 20 | + | ARPC5 | 1 | - |
| exon-exon | ATP2C1 | 3 | + | COL6A6 | 3 | + |
| exon-exon | PRPF39 | | + | TOGARAM1 | | + |
| exon-exon | SPAG1 | | + | STK3 | 8 | - |
| exon-exon | FOXRED2 | | - | MYH9 | 22 | - |
| exon-exon | LIFR | 5 | - | BCAS3 | 17 | + |
| exon-exon | AGAP3 | 7 | + | RELN | | - |
| exon-exon | MB21D2 | 3 | - | FGF12 | 3 | - |
| exon-exon | STAG1 | 3 | - | MSL2 | 3 | - |
| exon-exon | SLC12A8 | 3 | - | BCAS1 | 20 | - |
| exon-exon | NFX1 | 9 | + | UBE2R2 | 9 | + |
| exon-exon | KDM4A | | + | PTCH2 | 1 | - |
| exon-exon | SEMA3F | 3 | + | RBM6 | 3 | + |
| exon-exon | TKT | 3 | - | CFAP20DC | 3 | - |
| exon-exon | CTSC | 11 | - | GRM5 | 11 | - |
| exon-exon | ADD1 | 4 | + | FAM193A | 4 | + |
| exon-exon | KIAA0100 | 17 | - | ALKBH5 | 17 | + |
| exon-exon | TMX3 | | - | METTL4 | | - |
| exon-exon | SMAD2 | 18 | - | CD226 | | - |
| exon-exon | AAMP | | - | MARCHF4 | 2 | - |
| exon-exon | SIRT6 | 19 | - | CREB3L3 | 19 | + |
| exon-exon | PHGDH | 1 | + | HMGCS2 | | - |
| exon-exon | ACAP2 | | - | ATP13A3 | 3 | - |
| exon-exon | NPLOC4 | 17 | - | P4HB | 17 | - |
| exon-exon | ADAM9 | 8 | + | RNF170 | 8 | - |
| exon-exon | CARD8 | 19 | - | SULT2B1 | | + |
| exon-exon | SLCO3A1 | | + | BMPR2 | 2 | + |
| exon-exon | RABEP1 | 17 | + | PIGL | 17 | + |
| exon-exon | DNAJC16 | 1 | + | FHAD1 | 1 | + |
| exon-exon | TPD52L1 | | + | RNF217 | | + |
| exon-exon | OTUD7B | 1 | - | HORMAD1 | 1 | - |
| exon-exon | OSCP1 | 1 | - | SOX2-OT | 3 | + |
| exon-exon | AGO2 | 8 | - | PTK2 | 8 | - |
| exon-exon | RECQL | 12 | - | FGF23 | | - |
| exon-exon | OPA1 | 3 | + | PPP2R3A | | + |
| exon-exon | ERICH1 | 8 | - | IYD | | + |
| exon-exon | EHBP1L1 | 11 | + | FRMD8 | 11 | + |
| exon-exon | MED20 | | - | TLL2 | | - |
| exon-exon | TRIM28 | 19 | + | ZBTB45 | 19 | - |
| exon-exon | FAM193A | 4 | + | TNIP2 | | - |
| exon-exon | CTSB | 8 | - | DEFB136 | | - |
| exon-exon | ATP1B3 | 3 | + | RNF7 | 3 | + |
| exon-exon | ACVR2A | | + | CASP8 | 2 | + |
| exon-exon | MYH9 | 22 | - | FOXRED2 | 22 | - |
| exon-exon | PHC3 | 3 | - | FNDC3B | 3 | + |
| exon-exon | UNK | 17 | + | DPYD | 1 | - |
| exon-exon | ART3 | 4 | + | NUP54 | | - |
| exon-exon | ZNF532 | 18 | + | MALT1 | 18 | + |
| exon-exon | ZNF490 | | - | FARSA | 19 | - |
| exon-exon | MXRA8 | 1 | - | CDK11A | 1 | - |
| exon-exon | CTIF | 18 | + | MOCOS | 18 | + |
| exon-exon | ABCG1 | | + | MEI1 | 22 | + |
| exon-exon | ABCG1 | | + | CCDC134 | 22 | + |
| exon-exon | TASOR2 | | + | NET1 | | + |
| exon-exon | NFE2L2 | 2 | - | ZC3H13 | 13 | - |
| exon-exon | LAMTOR4 | 7 | + | AP4M1 | 7 | + |
| exon-exon | ZBED4 | 22 | + | SUGCT | 7 | + |
| exon-exon | SLC12A7 | 5 | - | TMEM117 | 12 | + |
| exon-exon | P3H1 | 1 | - | ERI3 | | - |
| exon-exon | PACSIN2 | 22 | - | TTLL1 | 22 | - |
| exon-exon | LMAN2 | 5 | - | F12 | | - |
| exon-exon | TMTC2 | 12 | + | METTL25 | | + |
| exon-exon | SYPL1 | 7 | - | AKR1D1 | | + |
| exon-exon | STAT4 | | - | ACKR3 | 2 | + |
| exon-exon | EXOC4 | 7 | + | PTAFR | 1 | - |
| exon-exon | ATP2B4 | 1 | + | ERBB4 | 2 | - |
| exon-exon | NPC1 | | - | FGD4 | 12 | + |
| exon-exon | RASA1 | 5 | + | RAPGEF6 | 5 | - |
| exon-exon | SNAPIN | | + | S100A1 | 1 | + |
| exon-exon | MYH9 | 22 | - | LTO1 | 11 | - |
| exon-exon | RFTN1 | 3 | - | DAZL | 3 | - |
| exon-exon | TAF3 | | + | DNAJC1 | 10 | - |
| exon-exon | TACC2 | 10 | + | HS1BP3 | 2 | - |
| exon-exon | PTK7 | 6 | + | DLK2 | 6 | - |
| exon-exon | MMUT | 6 | - | SUPT3H | 6 | - |
| exon-exon | HAT1 | 2 | + | EXOC6B | 2 | - |
| exon-exon | FBXO9 | 6 | + | CD74 | 5 | - |
| exon-exon | CD74 | 5 | - | ROS1 | 6 | - |
| exon-exon | SERGEF | 11 | - | ANKRD29 | 18 | - |
| exon-exon | ECE1 | 1 | - | NIPAL3 | 1 | + |
| exon-exon | PICALM | 11 | - | CCDC81 | | + |
| exon-exon | DCP1A | | - | LINC00681 | | + |
| exon-exon | VPS13B | 8 | + | SGCZ | | - |
| exon-exon | KDM4B | 19 | + | AKAP8L | 19 | - |
| exon-exon | COQ8B | 19 | - | AKAP8 | | - |
| exon-exon | GTPBP1 | 22 | + | TOMM22 | 22 | + |
| exon-exon | NBEA | | + | NDFIP2 | | + |
| exon-exon | GLI3 | | - | HIBADH | | - |
| exon-exon | EZR | 6 | - | ROS1 | 6 | - |
| exon-exon | HM13 | 20 | + | BCL2L1 | | - |
| exon-exon | TAF8 | 6 | + | CRISP1 | | - |
| exon-exon | LARP4 | 12 | + | MUCL1 | | + |
| exon-exon | ADGRF5 | | - | MEP1A | | + |
| exon-exon | DTNA | 18 | + | AQP4 | 18 | - |
| exon-exon | ARID1A | 1 | + | THSD7B | | + |
| exon-exon | USP9X | X | + | ATP6AP2 | X | + |
| exon-exon | NPLOC4 | 17 | - | ALYREF | 17 | - |
| exon-exon | MAST3 | 19 | + | MAP1S | 19 | + |
| exon-exon | CHMP4B | 20 | + | CBFA2T2 | 20 | + |
| exon-exon | ENO2 | 12 | + | ACRBP | 12 | - |
| exon-exon | SHH | | - | KNG1 | 3 | + |
| exon-exon | PSMA3 | 14 | + | STRADA | 17 | - |
| exon-exon | CAMKK2 | 12 | - | HPD | 12 | - |
| exon-exon | ZBTB7B | 1 | + | ZMPSTE24 | | + |
| exon-exon | NFYC | 1 | + | ZBTB7B | | + |
| exon-exon | ASPH | 8 | - | DCLK1 | | - |
| exon-exon | SATB1 | 3 | - | GOLGA5 | 14 | + |
| exon-exon | WWP1 | | + | LRRCC1 | | + |
| exon-exon | WDR55 | | + | PAIP2 | 5 | + |
| exon-exon | VPS53 | 17 | - | SMG6 | 17 | - |
| exon-exon | EEF2 | 19 | - | MAP2K2 | 19 | - |
| exon-exon | UTRN | 6 | + | AIG1 | | + |
| exon-exon | UBE2D2 | 5 | + | CTNNA1 | 5 | + |
| exon-exon | TXNDC15 | | + | LEAP2 | | + |
| exon-exon | TCF25 | 16 | + | ZC3H18 | | + |
| exon-exon | ST7 | 7 | + | FOXP2 | | + |
| exon-exon | RBFOX2 | 22 | - | RAC2 | 22 | - |
| exon-exon | PPP2R5C | | + | CCDC28B | 1 | + |
| exon-exon | MTMR3 | 22 | + | TSHZ2 | 20 | + |
| exon-exon | MGMT | 10 | + | DOCK1 | 10 | + |
| exon-exon | ABHD16A | 6 | - | FKBPL | 6 | - |
| exon-exon | MAP4 | 3 | - | QRICH1 | 3 | - |
| exon-exon | KIF23 | | + | PIAS1 | 15 | + |
| exon-exon | KDM4C | 9 | + | INSL4 | | + |
| exon-exon | GTPBP1 | 22 | + | CDC42EP1 | | + |
| exon-exon | CPN1 | 10 | - | ACTR1A | 10 | - |
| exon-exon | BAZ1B | 7 | - | MLXIPL | 7 | - |
| exon-exon | ACAP2 | | - | DLG1 | 3 | - |
| exon-exon | STRN3 | 14 | - | MAML3 | 4 | - |
| exon-exon | ITPR2 | 12 | - | DCDC2 | 6 | - |
| exon-exon | DNAJC3 | 13 | + | MCF2L | 13 | + |
| exon-exon | SYF2 | 1 | - | RHD | | + |
| exon-exon | SPOPL | | + | ZEB2-AS1 | | + |
| exon-exon | EBNA1BP2 | 1 | - | FMO3 | | + |
| exon-exon | TMPRSS6 | | - | MPST | 22 | + |
| exon-exon | PSMA3 | 14 | + | ACTR10 | 14 | + |
| exon-exon | HAUS6 | 9 | - | PLIN2 | 9 | - |
| exon-exon | CLIP1 | 12 | - | RSRC2 | 12 | - |
| exon-exon | TEN1-CDK3 | 17 | + | UNK | 17 | + |
| exon-exon | AGPAT3 | 21 | + | RRP1 | 21 | + |
| exon-exon | WDR37 | 10 | + | AHNAK | 11 | - |
| exon-exon | UGT2B4 | | - | MTHFD2L | 4 | + |
| exon-exon | OAF | 11 | + | APOA5 | | - |
| exon-exon | ITGA5 | | - | GTSF1 | 12 | - |
| exon-exon | CARD10 | 22 | - | LGALS2 | | - |
| exon-exon | URI1 | 19 | + | RYR1 | 19 | + |
| exon-exon | RAI1 | 17 | + | MAN1A2 | | + |
| exon-exon | VAMP1 | 12 | - | CHD4 | 12 | - |
| exon-exon | TTC28 | 22 | - | PITPNB | 22 | - |
| exon-exon | EFNA5 | 5 | - | FBXL17 | 5 | - |
| exon-exon | IP6K1 | 3 | - | MON1A | | - |
| exon-exon | SLC47A2 | | - | ALDH3A1 | 17 | - |
| exon-exon | SNRPA | 19 | + | ANKRD24 | | + |
| exon-exon | ABCA7 | 19 | + | COL5A3 | | - |
| exon-exon | ANKRD11 | 16 | - | RAB11FIP3 | 16 | + |
| exon-exon | ZNF277 | 7 | + | IMMP2L | 7 | - |
| exon-exon | ZC3HC1 | 7 | - | ADAM22 | | + |
| exon-exon | AKAP9 | 7 | + | ZNF3 | 7 | - |
| exon-exon | C9orf147 | 9 | - | ABLIM1 | 10 | - |
| exon-exon | TNKS | 8 | + | RHOT1 | 17 | + |
| exon-exon | SMAD3 | 15 | + | DLGAP4 | 20 | + |
| exon-exon | WDR60 | 7 | + | VIPR2 | | - |
| exon-exon | FHIT | 3 | - | CAMK4 | 5 | + |
| exon-exon | TRIP12 | 2 | - | SLC16A14 | 2 | - |
| exon-exon | ZBTB21 | | - | PFKL | 21 | + |
| exon-exon | ZBTB21 | | - | AIRE | | + |
| exon-exon | TRAPPC10 | 21 | + | RTL4 | | + |
| exon-exon | VOPP1 | 7 | - | ZNF713 | 7 | + |
| exon-exon | THOC2 | X | - | LINC01673 | | + |
| exon-exon | LHFPL2 | 5 | - | H2AC6 | 6 | + |
| exon-exon | KHSRP | 19 | - | TFE3 | X | - |
| exon-exon | HUNK | | + | MAMLD1 | X | + |
| exon-exon | DIP2A | 21 | + | THOC2 | X | - |
| exon-exon | DCX | | - | PASD1 | | + |
| exon-exon | CXADR | 21 | + | CMC4 | X | - |
| exon-exon | CRIM1 | 2 | + | TACR1 | | - |
| exon-exon | RHOA | 3 | - | NICN1 | 3 | - |
| exon-exon | MCC | 5 | - | PSMD6 | 3 | - |
| exon-exon | ADAMTS9-AS2 | 3 | + | PTPRG | 3 | + |
| exon-exon | FAM172A | 5 | - | FHIT | | - |
| exon-exon | HMGB1 | 13 | - | CRYL1 | 13 | - |
| exon-exon | BRAF | 7 | - | AP3B1 | 5 | - |
| exon-exon | TRA2A | 7 | - | THADA | 2 | - |
| exon-exon | WARS1 | 14 | - | CCNY | | + |
| exon-exon | ETV6 | 12 | + | NTRK3 | 15 | - |
| exon-exon | TPM1 | 15 | + | PTMS | 12 | + |
| exon-exon | MALAT1 | 11 | + | ALK | 2 | - |
| exon-exon | ERC1 | 12 | + | RET | 10 | + |
| exon-exon | ERC1 | 12 | + | RET | 10 | + |
| exon-exon | GAS8 | 16 | + | WDR59 | 16 | - |
| exon-exon | STRN | 2 | - | ALK | 2 | - |
| exon-exon | TFG | 3 | + | MET | 7 | + |
| exon-exon | MET | 7 | + | TFG | 3 | + |
| exon-exon | METRN | 16 | + | C1orf122 | 1 | + |
| exon-exon | PAX8 | 2 | - | NFE2L2 | 2 | - |
| exon-exon | NFIX | 19 | + | GATAD2A | 19 | + |
| exon-exon | FBXL20 | 17 | - | UNC45B | | + |
| exon-exon | TSC1 | 9 | - | DOLPP1 | 9 | + |
| exon-exon | SART1 | 11 | + | CNTN5 | 11 | + |
| exon-exon | LDLR | 19 | + | HSH2D | 19 | + |
| exon-exon | PHF21A | 11 | - | GLIS2 | | + |
| exon-exon | RRAS2 | | - | COPB1 | 11 | - |
| exon-exon | MAPKAPK2 | 1 | + | RASSF5 | 1 | + |
| exon-exon | ME3 | 11 | - | TYR | 11 | + |
| exon-exon | CBX7 | | - | VPREB1 | | + |
| exon-exon | NFYA | 6 | + | TSPO2 | 6 | + |
| exon-exon | TRIP12 | 2 | - | PID1 | 2 | - |
| exon-exon | YIPF1 | | - | YTHDF2 | 1 | + |
| exon-exon | PANX1 | 11 | + | CEP126 | 11 | + |
| exon-exon | HIRA | 22 | - | BCL2L13 | 22 | + |
| exon-exon | MAN2A1 | 5 | + | CDK14 | 7 | + |
| exon-exon | NSD2 | 4 | + | PIBF1 | | + |
| exon-exon | PARD6G | 18 | - | RFTN2 | 2 | - |
| exon-exon | LAMC2 | 1 | + | WASHC3 | 12 | - |
| exon-exon | FILIP1L | 3 | - | IMPG2 | 3 | - |
| exon-exon | TTLL5 | 14 | + | TMED10 | 14 | - |
| exon-exon | TMED10 | 14 | - | TTLL5 | 14 | + |
| exon-exon | PHACTR2 | 6 | + | PLAGL1 | 6 | - |
| exon-exon | NRP2 | 2 | + | PARD3B | 2 | + |
| exon-exon | DHX15 | 4 | - | RBPJ | 4 | + |
| exon-exon | NQO2 | 6 | + | SLC3A2 | 11 | + |
| exon-exon | SELENOW | 19 | + | EHD2 | 19 | + |
| exon-exon | RALY | 20 | + | ASXL1 | 20 | + |
| exon-exon | FRMD6 | 14 | + | LINC00640 | | + |
| exon-exon | RNH1 | 11 | - | HRAS | | - |
| exon-exon | EIF2A | 3 | + | B2M | 15 | + |
| exon-exon | DNM2 | 19 | + | CNN1 | 19 | + |
| exon-exon | USP7 | 16 | - | PRKCB | 16 | + |
| exon-exon | WIPF2 | 17 | + | TUBD1 | | - |
| exon-exon | KSR1 | 17 | + | NOS2 | | - |
| exon-exon | FBXL20 | 17 | - | TADA2A | | + |
| exon-exon | HHAT | | + | KCNH1 | 1 | - |
| exon-exon | CISD3 | | + | STARD3 | 17 | + |
| exon-exon | PTPRK | 6 | - | RSPO3 | 6 | + |
| exon-exon | SCYL1 | 11 | + | PACS1 | 11 | + |
| exon-exon | RUNX1 | 21 | - | ZMAT4 | 8 | - |
| exon-exon | PHGR1 | | + | DISP2 | | + |
| exon-exon | ZNF774 | 15 | + | TTLL13P | | + |
| exon-exon | USP25 | 21 | + | CYYR1 | | - |
| exon-exon | DYRK1A | 21 | + | APP | 21 | - |
| exon-exon | BIRC2 | 11 | + | TMEM123 | 11 | - |
| exon-exon | AFAP1 | 4 | - | ABLIM2 | 4 | - |
| exon-exon | SIPA1 | | + | RHOD | 11 | + |
| exon-exon | AHCTF1 | 1 | - | SMYD3 | 1 | - |
| exon-exon | EFNA3 | | + | PIK3C2G | | + |
| exon-exon | TENT4B | 16 | + | SHANK2 | 11 | - |
| exon-exon | TESMIN | | - | PPFIA1 | 11 | + |
| exon-exon | ZMIZ1 | 10 | + | NSMCE4A | 10 | - |
| exon-exon | TCF12 | 15 | + | MGST2 | | + |
| exon-exon | STK26 | | + | ZC4H2 | X | - |
| exon-exon | MIAT | 22 | + | TMEM230 | 20 | - |
| exon-exon | MVP | 16 | + | MTPN | 7 | - |
| exon-exon | JAZF1 | 7 | - | LOC101928782 | | + |
| exon-exon | FAM222B | 17 | - | PHF12 | 17 | - |
| exon-exon | EP300 | 22 | + | IPO5 | 13 | + |
| exon-exon | EHBP1 | 2 | + | MDH1 | 2 | + |
| exon-exon | CD99L2 | X | - | ARHGAP36 | | + |
| exon-exon | BPTF | 17 | + | PITPNC1 | 17 | + |
| exon-exon | ADI1 | 2 | - | KHDRBS3 | 8 | + |
| exon-exon | TCF12 | 15 | + | TEX9 | 15 | + |
| exon-exon | SCNN1G | | + | COL27A1 | 9 | + |
| exon-exon | XRCC5 | 2 | + | MYO5A | 15 | - |
| exon-exon | MRTFB | 16 | + | SNX29 | 16 | + |
| exon-exon | KIAA0319L | 1 | - | YTHDF2 | 1 | + |
| exon-exon | ST3GAL3 | 1 | + | TAL1 | | - |
| exon-exon | RNF11 | 1 | + | TMEM61 | 1 | + |
| exon-exon | RALGAPB | | + | RPRD1B | 20 | + |
| exon-exon | PTBP2 | 1 | + | KAZN | 1 | + |
| exon-exon | FAF1 | 1 | - | NFIA | 1 | + |
| exon-exon | CACHD1 | 1 | + | CLIC4 | 1 | + |
| exon-exon | TRIM25 | 17 | - | TBX4 | | + |
| exon-exon | EMC2 | | + | PAPSS2 | 10 | + |
| exon-exon | NAALADL2 | 3 | + | PEX5L | 3 | - |
| exon-exon | ERBB2 | 17 | + | ARL5C | | - |
| exon-exon | TMEM135 | 11 | + | AAMDC | 11 | + |
| exon-exon | ELAVL1 | | - | HDGFL2 | 19 | + |
| exon-exon | PUM1 | 1 | - | RPH3AL | | - |
| exon-exon | NUP153 | 6 | - | RNF2 | | + |
| exon-exon | APOLD1 | 12 | + | CDKN1B | 12 | + |
| exon-exon | SNX27 | 1 | + | ADAR | 1 | - |
| exon-exon | MYO1D | 17 | - | SSH2 | 17 | - |
| exon-exon | NSD3 | 8 | - | PSD3 | 8 | - |
| exon-exon | SKIL | | + | EHD2 | 19 | + |
| exon-exon | RHOT1 | 17 | + | FGFR1 | 8 | - |
| exon-exon | RAD54L2 | 3 | + | ERC2 | 3 | - |
| exon-exon | MATR3 | 5 | + | CTNNA1 | 5 | + |
| exon-exon | ZMAT3 | 3 | - | LINC01014 | | + |
| exon-exon | TMEM123 | 11 | - | MMP7 | 11 | - |
| exon-exon | PDE7A | 8 | - | TRIM55 | 8 | + |
| exon-exon | EIF2AK2 | 2 | - | CEBPZ | | - |
| exon-exon | CSN3 | | + | FDCSP | | + |
| exon-exon | USP22 | 17 | - | MYH10 | 17 | - |
| exon-exon | YPEL2 | | + | HSPA12B | | + |
| exon-exon | MTHFD1L | 6 | + | NKAIN2 | 6 | + |
| exon-exon | VPS35 | 16 | - | SLC6A2 | 16 | + |
| exon-exon | UVRAG | 11 | + | PAK1 | 11 | - |
| exon-exon | USP43 | 17 | + | ENDOV | | + |
| exon-exon | RANBP10 | 16 | - | RRP15 | | + |
| exon-exon | NXT1 | | + | VPS16 | 20 | + |
| exon-exon | MAP2K4 | 17 | + | DNAH9 | | + |
| exon-exon | EVPL | 17 | - | MAP2K6 | 17 | + |
| exon-exon | CES2 | 16 | + | GPATCH2 | | - |
| exon-exon | LLGL1 | 17 | + | DRG2 | 17 | + |
| exon-exon | IGF1R | 15 | + | MAPK6 | 15 | + |
| exon-exon | CENPV | 17 | - | FERMT1 | | - |
| exon-exon | C2CD3 | 11 | - | P2RY6 | | + |
| exon-exon | ACER3 | 11 | + | UVRAG | 11 | + |
| exon-exon | ZNF345 | 19 | + | TRIM21 | | - |
| exon-exon | STAT3 | 17 | - | CAVIN1 | 17 | - |
| exon-exon | SLC30A6 | 2 | + | SPAST | 2 | + |
| exon-exon | PGS1 | 17 | + | BIRC5 | 17 | + |
| exon-exon | KDM2A | 11 | + | RHOD | 11 | + |
| exon-exon | GUK1 | 1 | + | TPPP | | - |
| exon-exon | GATAD2A | 19 | + | MAU2 | 19 | + |
| exon-exon | GABRP | 5 | + | KCNIP1 | 5 | + |
| exon-exon | ABR | 17 | - | STAP2 | 19 | - |
| exon-exon | PRRC2B | 9 | + | SET | 9 | + |
| exon-exon | NSA2 | 5 | + | HEXB | 5 | + |
| exon-exon | NPTN | 15 | - | CLUAP1 | 16 | + |
| exon-exon | TRAPPC9 | 8 | - | COL22A1 | | - |
| exon-exon | FAM214A | 15 | - | FAM169B | | - |
| exon-exon | MSI2 | 17 | + | WIPF2 | 17 | + |
| exon-exon | CHMP5 | 9 | + | VMP1 | 17 | + |
| exon-exon | APTX | 9 | - | GNE | 9 | - |
| exon-exon | AKAP1 | 17 | + | GGA3 | 17 | - |
| exon-exon | ZNF732 | 4 | - | DAB1 | 1 | - |
| exon-exon | TCF12 | 15 | + | TMEM255B | 13 | + |
| exon-exon | SPTBN2 | 11 | - | FGF19 | 11 | - |
| exon-exon | WARS1 | 14 | - | MSH6 | 2 | + |
| exon-exon | MAPK1 | 22 | - | KCNJ4 | | - |
| exon-exon | AFAP1 | 4 | - | ABLIM2 | 4 | - |
| exon-exon | GUK1 | 1 | + | TARBP1 | | - |
| exon-exon | ANKRD11 | 16 | - | LINGO1 | | - |
| exon-exon | URI1 | 19 | + | IFNL1 | | + |
| exon-exon | TRPS1 | 8 | - | ZNRF2 | | + |
| exon-exon | TP53BP1 | 15 | - | DMXL2 | 15 | - |
| exon-exon | TBCD | 17 | + | SLC9A3R1 | 17 | + |
| exon-exon | SMAD3 | 15 | + | DIS3L | 15 | + |
| exon-exon | SEPTIN9 | 17 | + | SEC14L1 | 17 | + |
| exon-exon | RNF13 | 3 | + | TM4SF4 | 3 | + |
| exon-exon | RIC8B | 12 | + | RFX4 | 12 | + |
| exon-exon | WDR45B | 17 | - | CYBC1 | 17 | - |
| exon-exon | RERE | 1 | - | ENO1 | 1 | - |
| exon-exon | PBRM1 | 3 | - | TKT | 3 | - |
| exon-exon | NSD1 | 5 | + | ZNF346 | 5 | + |
| exon-exon | MTF2 | 1 | + | BRDT | | + |
| exon-exon | MSH2 | 2 | + | TTC7A | 2 | + |
| exon-exon | LIFR | 5 | - | C9 | 5 | - |
| exon-exon | ILKAP | 2 | - | PER2 | 2 | - |
| exon-exon | ENOX1 | | - | FNDC3A | 13 | + |
| exon-exon | DGCR2 | 22 | - | CLTCL1 | 22 | - |
| exon-exon | RPS19 | 19 | + | HNRNPUL1 | 19 | + |
| exon-exon | DCAF6 | 1 | + | MPZL1 | 1 | + |
| exon-exon | ASH1L | 1 | - | ARHGEF2 | 1 | - |
| exon-exon | APBA2 | | + | GABRB3 | | - |
| exon-exon | RIC8B | 12 | + | LINC01483 | 17 | + |
| exon-exon | WWP2 | 16 | + | TSEN54 | 17 | + |
| exon-exon | TSC2 | | + | TMEM204 | | + |
| exon-exon | STK17B | 2 | - | HECW2 | 2 | - |
| exon-exon | ST14 | 11 | + | ST7 | 7 | + |
| exon-exon | SMARCA4 | 19 | + | ICAM1 | 19 | + |
| exon-exon | OAZ1 | 19 | + | BTBD2 | 19 | - |
| exon-exon | GIGYF2 | 2 | + | CHRND | | + |
| exon-exon | EXOC4 | 7 | + | SLC25A13 | 7 | - |
| exon-exon | DDB1 | 11 | - | TMEM258 | 11 | - |
| exon-exon | CHMP4B | 20 | + | CBFA2T2 | 20 | + |
| exon-exon | CCNY | 10 | + | DENND1A | 9 | - |
| exon-exon | TSC2 | | + | LINC02124 | | + |
| exon-exon | SCARB1 | 12 | - | DHX37 | | - |
| exon-exon | PVT1 | 8 | + | CS | 12 | - |
| exon-exon | MAN1A2 | 1 | + | TTF2 | | + |
| exon-exon | AHCY | 20 | - | DHPS | 19 | - |
| exon-exon | IFFO2 | 1 | - | UBR4 | 1 | - |
| exon-exon | GMDS | | - | METTL24 | 6 | - |
| exon-exon | FRMD8 | | + | MAST1 | | + |
| exon-exon | ELF5 | | - | CAT | 11 | + |
| exon-exon | UBL3 | 13 | - | MTIF3 | 13 | - |
| exon-exon | RNF121 | 11 | + | CYSLTR2 | | + |
| exon-exon | PTK2 | 8 | - | SLC45A4 | | - |
| exon-exon | ZNF91 | 19 | - | RNF38 | 9 | - |
| exon-exon | UCK2 | 1 | + | SNX27 | 1 | + |
| exon-exon | TTC6 | 14 | + | MIPOL1 | 14 | + |
| exon-exon | QKI | 6 | + | PACRG | 6 | + |
| exon-exon | RTN4 | 2 | - | DTNB | 2 | - |
| exon-exon | RARA | 17 | + | PRR11 | | + |
| exon-exon | PTPRK | 6 | - | MAP4K3-DT | 2 | + |
| exon-exon | NOS1AP | 1 | + | MROH9 | | + |
| exon-exon | APH1A | 1 | - | RGS4 | 1 | + |
| exon-exon | TRAPPC10 | 21 | + | BRWD1 | 21 | - |
| exon-exon | VPS26C | 21 | - | IGSF5 | 21 | + |
| exon-exon | PPP1R1B | 17 | + | PIPOX | 17 | + |
| exon-exon | MOSPD2 | X | + | REPS2 | | + |
| exon-exon | MIR924HG | 18 | - | CGGBP1 | 3 | - |
| exon-exon | HOOK3 | 8 | + | IKBKB | 8 | + |
| exon-exon | LRP12 | 8 | - | TRAPPC9 | 8 | - |
| exon-exon | TUBGCP3 | 13 | - | FARP1 | 13 | + |
| exon-exon | TMBIM4 | 12 | - | GRIP1 | 12 | - |
| exon-exon | MYH9 | 22 | - | CACNG2 | | - |
| exon-exon | SPECC1 | 17 | + | TMEM11 | 17 | - |
| exon-exon | MED1 | 17 | - | TMPRSS9 | 19 | + |
| exon-exon | LAMB2 | 3 | - | ADGRG5 | | + |
| exon-exon | ACTB | 7 | - | P4HB | 17 | - |
| exon-exon | MAPK1IP1L | 14 | + | ARF6 | 14 | + |
| exon-exon | L2HGDH | 14 | - | LMBRD1 | 6 | - |
| exon-exon | GPR137C | | + | FERMT2 | 14 | - |
| exon-exon | FBXL20 | 17 | - | SIRT6 | | - |
| exon-exon | ESRP2 | 16 | - | SLC7A6 | 16 | + |
| exon-exon | RNF121 | 11 | + | ESRRG | | - |
| exon-exon | MAP4 | 3 | - | KIF9-AS1 | 3 | + |
| exon-exon | MANF | | + | SETD2 | 3 | - |
| exon-exon | KLHL18 | 3 | + | TEX264 | 3 | + |
| exon-exon | ARRB1 | 11 | - | GAB2 | 11 | - |
| exon-exon | PEX14 | 1 | + | PTPN14 | 1 | - |
| exon-exon | TM2D2 | | - | ADAM9 | 8 | + |
| exon-exon | SGPP2 | 2 | + | ALG14 | | - |
| exon-exon | RAD51AP1 | | + | CD27-AS1 | 12 | - |
| exon-exon | TPRG1 | | + | DGKG | 3 | - |
| exon-exon | MED13 | 17 | - | VMP1 | 17 | + |
| exon-exon | ITGB5 | 3 | - | PARP14 | 3 | + |
| exon-exon | IQCB1 | | - | CACNG4 | 17 | + |
| exon-exon | EAF2 | | + | RGS9 | | + |
| exon-exon | CMSS1 | 3 | + | TBKBP1 | | + |
| exon-exon | GNE | 9 | - | RNF38 | 9 | - |
| exon-exon | INTS9 | 8 | - | PHYHIP | | - |
| exon-exon | WIPF2 | 17 | + | EZH1 | 17 | - |
| exon-exon | STXBP4 | | + | PPM1D | 17 | + |
| exon-exon | STXBP4 | | + | MSI2 | 17 | + |
| exon-exon | RARA | 17 | + | MYO1D | 17 | - |
| exon-exon | NF1 | 17 | + | NLE1 | 17 | - |
| exon-exon | MED1 | 17 | - | GDPD1 | 17 | + |
| exon-exon | MBTD1 | | - | EFCAB3 | 17 | + |
| exon-exon | GRB7 | 17 | + | PGAP3 | 17 | - |
| exon-exon | CEP57 | | + | MTMR2 | 11 | - |
| exon-exon | FBXL20 | 17 | - | ERBB2 | 17 | + |
| exon-exon | CDK12 | 17 | + | PPM1E | 17 | + |
| exon-exon | BCAS3 | 17 | + | CASC3 | 17 | + |
| exon-exon | USP39 | 2 | + | DNAH6 | | + |
| exon-exon | SHC1 | 1 | - | RPRD2 | 1 | + |
| exon-exon | RPRD2 | 1 | + | SHC1 | 1 | - |
| exon-exon | RNF169 | 11 | + | CBX1 | 17 | - |
| exon-exon | BRCA2 | 13 | + | N4BP2L2 | 13 | - |
| exon-exon | RAB3GAP1 | 2 | + | ACMSD | | + |
| exon-exon | RAB38 | | - | CA10 | | - |
| exon-exon | PNCK | | - | HCFC1 | X | - |
| exon-exon | PLEKHF2 | | + | NDUFAF6 | | + |
| exon-exon | KAT6B | 10 | + | ADK | 10 | + |
| exon-exon | GFM1 | 3 | + | MLF1 | | + |
| exon-exon | EPS15L1 | 19 | - | CLNS1A | 11 | - |
| exon-exon | EFHD1 | 2 | + | EIF4E2 | 2 | + |
| exon-exon | CORO1B | | - | ERBB2 | 17 | + |
| exon-exon | CKS1B | 1 | + | SHC1 | 1 | - |
| exon-exon | TRIM44 | 11 | + | ARRB1 | 11 | - |
| exon-exon | BCR | 22 | + | IRAG1 | 11 | - |
| exon-exon | APPL1 | | + | SPATA12 | 3 | + |
| exon-exon | TTC6 | 14 | + | MIPOL1 | 14 | + |
| exon-exon | RFFL | 17 | - | NR1D1 | 17 | - |
| exon-exon | PSMD11 | 17 | + | CDK12 | 17 | + |
| exon-exon | NUMA1 | 11 | - | AATF | 17 | + |
| exon-exon | LRTOMT | 11 | + | UVRAG | 11 | + |
| exon-exon | FBXL20 | 17 | - | MYO1D | 17 | - |
| exon-exon | TANGO6 | 16 | + | CDH1 | 16 | + |
| exon-exon | SREBF2 | 22 | + | MEI1 | 22 | + |
| exon-exon | IPO11 | 5 | + | TNFAIP8 | 5 | + |
| exon-exon | CTBP2 | 10 | - | ADAM12 | 10 | - |
| exon-exon | UVRAG | 11 | + | LRTOMT | | + |
| exon-exon | TAOK1 | 17 | + | ACER3 | 11 | + |
| exon-exon | STARD3 | 17 | + | UVRAG | 11 | + |
| exon-exon | SOCS7 | 17 | + | FLOT2 | 17 | - |
| exon-exon | RARA | 17 | + | NARS2 | 11 | - |
| exon-exon | FBXL20 | 17 | - | GDPD5 | 11 | - |
| exon-exon | DDX52 | 17 | - | PSMD3 | 17 | + |
| exon-exon | ARRB1 | 11 | - | UVRAG | 11 | + |
| exon-exon | SLC7A5 | 16 | - | CA5A | | - |
| exon-exon | VAMP7 | X | + | TGFB2 | 1 | + |
| exon-exon | TYK2 | 19 | - | CDC37 | 19 | - |
| exon-exon | TMEM87B | 2 | + | MERTK | 2 | + |
| exon-exon | SCARB2 | 4 | - | STAU2 | 8 | - |
| exon-exon | RALGPS1 | 9 | + | TYRP1 | | + |
| exon-exon | KIAA1755 | 20 | - | HS6ST2 | X | - |
| exon-exon | UBA3 | 3 | - | FRMD4B | | - |
| exon-exon | ARHGEF26 | 3 | + | LINC00880 | | - |
| exon-exon | KRT8 | 12 | - | CSAD | 12 | - |
| exon-exon | YIPF4 | 2 | + | COMMD1 | 2 | + |
| exon-exon | SACM1L | 3 | + | LIMD1 | 3 | + |
| exon-exon | MPDZ | 9 | - | NFIB | 9 | - |
| exon-exon | MCM5 | 22 | + | HMOX1 | 22 | + |
| exon-exon | CNOT2 | 12 | + | RAB3IP | 12 | + |
| exon-exon | CDC42BPA | 1 | - | EPRS1 | 1 | - |
| exon-exon | ARID1B | 6 | + | NKAIN2 | 6 | + |
| exon-exon | SPOP | 17 | - | XYLT2 | | + |
| exon-exon | KDM3B | 5 | + | BRK1 | 3 | + |
| exon-exon | SCD | 10 | + | GPR19 | 12 | - |
| exon-exon | RNF43 | 17 | - | CACNA1G-AS1 | | - |
| exon-exon | LASP1 | 17 | + | ARHGAP23 | 17 | + |
| exon-exon | CDK8 | | + | IKZF3 | 17 | - |
| exon-exon | AKAP1 | 17 | + | ANKFN1 | | + |
| exon-exon | ADCK2 | 7 | + | DPP6 | 7 | + |
| exon-exon | ACSF2 | 17 | + | SPAG9 | 17 | - |
| exon-exon | UBQLN1 | 9 | - | GKAP1 | 9 | - |
| exon-exon | SPAG5 | 17 | - | BLMH | 17 | - |
| exon-exon | SMG6 | 17 | - | WDR20 | 14 | + |
| exon-exon | HIF1A | 14 | + | EEF1D | 8 | - |
| exon-exon | HNRNPUL2-BSCL2 | 11 | - | C11orf49 | 11 | + |
| exon-exon | RCC2 | 1 | - | PADI4 | 1 | + |
| exon-exon | RABEP1 | 17 | + | ASPA | 17 | + |
| exon-exon | MAST4 | 5 | + | NLN | | + |
| exon-exon | FLOT2 | 17 | - | PEX12 | | - |
| exon-exon | DDX42 | 17 | + | BRIP1 | | - |
| exon-exon | TEAD4 | 12 | + | C2CD5 | 12 | - |
| exon-exon | SS18L1 | 20 | + | CDH4 | 20 | + |
| exon-exon | SEMA3C | 7 | - | CNTNAP2 | 7 | + |
| exon-exon | RASSF8 | 12 | + | RERGL | 12 | - |
| exon-exon | NAP1L4 | 11 | - | RPAP1 | 15 | - |
| exon-exon | COX7B | X | + | MACROH2A1 | 5 | - |
| exon-exon | LCOR | 10 | + | CPNE8 | 12 | - |
| exon-exon | FGD4 | 12 | + | ABCC9 | 12 | - |
| exon-exon | C2CD5 | | - | ITPR2 | 12 | - |
| exon-exon | ANAPC5 | 12 | - | KDM2B | 12 | - |
| exon-exon | ADIPOR2 | 12 | + | FOXJ2 | | + |
| exon-exon | ITGB5 | 3 | - | WAC-AS1 | 10 | - |
| exon-exon | DAP | 5 | - | SNX9 | 6 | + |
| exon-exon | SUFU | 10 | + | GBF1 | 10 | + |
| exon-exon | B4GALT1 | 9 | - | BAG1 | 9 | - |
| exon-exon | MACROH2A1 | 5 | - | CNOT6 | 5 | + |
| exon-exon | ZNRF3 | | + | ASCC2 | 22 | - |
| exon-exon | ZNF544 | 19 | + | SENP6 | 6 | + |
| exon-exon | TLK1 | 2 | - | SSB | 2 | + |
| exon-exon | SHTN1 | 10 | - | EMX2OS | 10 | - |
| exon-exon | NSD3 | 8 | - | ADAM32 | | + |
| exon-exon | STAG1 | 3 | - | CRPPA-AS1 | | + |
| exon-exon | SHROOM3 | 4 | + | TRIM28 | 19 | + |
| exon-exon | RMND5A | 2 | + | CD8A | 2 | - |
| exon-exon | PLD3 | 19 | + | ACTN4 | 19 | + |
| exon-exon | LTBP4 | 19 | + | MYO1B | 2 | + |
| exon-exon | DYNC1I2 | 2 | + | SP3 | 2 | - |
| exon-exon | ATF6 | 1 | + | SH2D1B | | - |
| exon-exon | WDR76 | 15 | + | PDIA3 | 15 | + |
| exon-exon | TBL1XR1 | 3 | - | PIK3CA | 3 | + |
| exon-exon | GSK3B | 3 | - | FSTL1 | 3 | - |
| exon-exon | GNAI3 | 1 | + | SARS1 | 1 | + |
| exon-exon | CELSR1 | 22 | - | CERK | 22 | - |
| exon-exon | SLC39A1 | 1 | - | RAB13 | 1 | - |
| exon-exon | TRA2A | 7 | - | HECW1 | 7 | + |
| exon-exon | SLC44A1 | 9 | + | RAD23B | 9 | + |
| exon-exon | SKIL | | + | GPR160 | 3 | + |
| exon-exon | SESTD1 | 2 | - | ZNF385B | 2 | - |
| exon-exon | SAMD4B | 19 | + | SIPA1L3 | 19 | + |
| exon-exon | RRM1 | 11 | + | STIM1 | 11 | + |
| exon-exon | RFX3 | 9 | - | GLDC | 9 | - |
| exon-exon | MED25 | | + | AP2A1 | 19 | + |
| exon-exon | MAEA | 4 | + | TMEM71 | 8 | - |
| exon-exon | PATJ | 1 | + | ST6GALNAC5 | 1 | + |
| exon-exon | NEK4 | 3 | - | SEPSECS | | - |
| exon-exon | GALNT14 | 2 | - | SF3B6 | 2 | - |
| exon-exon | ACTN2 | 1 | + | CHRM3 | 1 | + |
| exon-exon | ACER3 | 11 | + | NARS2 | 11 | - |
| exon-exon | ZNF292 | 6 | + | FIG4 | 6 | + |
| exon-exon | ZC3HAV1 | 7 | - | ITPKB | 1 | - |
| exon-exon | QARS1 | 3 | - | USP19 | 3 | - |
| exon-exon | ITPKB | 1 | - | ZC3HAV1 | 7 | - |
| exon-exon | ANKRD46 | 8 | - | TMEM222 | | + |
| exon-exon | MICALL1 | 22 | + | EIF3L | 22 | + |
| exon-exon | TRIM33 | 1 | - | CSDE1 | 1 | - |
| exon-exon | PRR19 | | + | PPP1R37 | 19 | + |
| exon-exon | MEGF8 | 19 | + | PRR19 | 19 | + |
| exon-exon | ARFGEF2 | 20 | + | CNIH2 | 11 | + |
| exon-exon | YPEL2 | | + | PAK1 | 11 | - |
| exon-exon | WIPF2 | 17 | + | USP32 | 17 | - |
| exon-exon | PPM1D | | + | CCND1 | 11 | + |
| exon-exon | PGS1 | 17 | + | KIF22 | 16 | + |
| exon-exon | NF1 | 17 | + | CDK5RAP3 | 17 | + |
| exon-exon | HEATR6 | | - | PPME1 | 11 | + |
| exon-exon | GOPC | | - | ABLIM1 | 10 | - |
| exon-exon | ESR1 | 6 | + | CCDC170 | | + |
| exon-exon | DCAF7 | 17 | + | VMP1 | 17 | + |
| exon-exon | BCAS3 | 17 | + | SHANK2 | 11 | - |
| exon-exon | BCAS3 | 17 | + | RNF169 | 11 | + |
| exon-exon | TAF15 | 17 | + | MAN1A2 | | + |
| exon-exon | PTGFRN | | + | NOTCH2 | 1 | - |
| exon-exon | DIAPH3 | 13 | - | ELAPOR2 | 7 | - |
| exon-exon | PRPF18 | 10 | + | CACNB2 | 10 | + |
| exon-exon | LRRC8E | | + | MFSD12 | 19 | - |
| exon-exon | KIAA1109 | 4 | + | ADGRA3 | 4 | - |
| exon-exon | ESRRG | 1 | - | ADCY10 | | - |
| exon-exon | ALCAM | 3 | + | EIF2A | 3 | + |
| exon-exon | TESMIN | | - | CPT1A | | - |
| exon-exon | CHD9 | 16 | + | RAD51B | 14 | + |
| exon-exon | STAU1 | 20 | - | CTSA | 20 | + |
| exon-exon | RARA | 17 | + | ZNF595 | 4 | + |
| exon-exon | PPM1H | 12 | - | SRGAP1 | 12 | + |
| exon-exon | PMEPA1 | | - | PTGIS | | - |
| exon-exon | CACNB1 | 17 | - | MLLT6 | 17 | + |
| exon-exon | NUDCD1 | 8 | - | EIF3H | 8 | - |
| exon-exon | NCK1 | | + | RAB6B | 3 | - |
| exon-exon | TMEM123 | 11 | - | MMP27 | | - |
| exon-exon | CDK15 | | + | FOLR2 | | + |
| exon-exon | CSNK1G2 | 19 | + | SCAMP4 | | + |
| exon-exon | RNF19A | 8 | - | SNX31 | | - |
| exon-exon | NIPBL | | + | CLSPN | 1 | - |
| exon-exon | FBXL20 | 17 | - | MIEN1 | 17 | - |
| exon-exon | FAM219A | 9 | - | PAX5 | 9 | - |
| exon-exon | CD59 | 11 | - | FBXO3 | 11 | - |
| exon-exon | ASXL1 | 20 | + | TM9SF4 | 20 | + |
| exon-exon | ARIH2 | 3 | + | DHX30 | 3 | + |
| exon-exon | ACOT9 | X | - | APOO | X | - |
| exon-exon | CLSTN1 | 1 | - | CTNNBIP1 | | - |
| exon-exon | SBNO2 | 19 | - | TPGS1 | | + |
| exon-exon | SBNO2 | 19 | - | ARHGEF1 | 19 | + |
| exon-exon | RPS6KB1 | 17 | + | VMP1 | 17 | + |
| exon-exon | MYO10 | 5 | - | BASP1-AS1 | | - |
| exon-exon | MSL2 | 3 | - | STAG1 | 3 | - |
| exon-exon | LONP1 | 19 | - | ZNF780B | 19 | - |
| exon-exon | ABTB2 | 11 | - | TYR | 11 | + |
| exon-exon | RASA1 | 5 | + | VDAC1 | 5 | - |
| exon-exon | LHFPL2 | 5 | - | KCNIP1 | 5 | + |
| exon-exon | HSF1 | 8 | + | ADAMTS12 | 5 | - |
| exon-exon | NSD2 | 4 | + | GRK4 | 4 | + |
| exon-exon | SORBS2 | 4 | - | AIF1 | 6 | + |
| exon-exon | PCNX2 | 1 | - | PTPN14 | 1 | - |
| exon-exon | GABPB2 | 1 | + | OR10J1 | | + |
| exon-exon | DSTYK | 1 | - | NAV1 | 1 | + |
| exon-exon | DOCK7 | 1 | - | PATJ | 1 | + |
| exon-exon | TESK2 | | - | GPR37L1 | 1 | + |
| exon-exon | SMC5 | 9 | + | IMMP2L | 7 | - |
| exon-exon | SEMA4C | | - | WNT5B | | + |
| exon-exon | TRAF2 | 9 | + | EPB41L4B | | - |
| exon-exon | SAP30BP | 17 | + | KCTD2 | 17 | + |
| exon-exon | KDM5A | 12 | - | NINJ2 | | - |
| exon-exon | ILF3 | 19 | + | SLC44A2 | 19 | + |
| exon-exon | DMC1 | | - | FAM227A | | - |
| exon-exon | IKBKB | 8 | + | FADD | | + |
| exon-exon | MSI2 | 17 | + | PCTP | 17 | + |
| exon-exon | LAMA5 | 20 | - | UBN1 | 16 | + |
| exon-exon | USP32 | 17 | - | PGS1 | 17 | + |
| exon-exon | RNF11 | 1 | + | FAF1 | 1 | - |
| exon-exon | TRIM37 | 17 | - | LINC01483 | 17 | + |
| exon-exon | SEPTIN9 | 17 | + | NARF | 17 | + |
| exon-exon | SCAMP2 | 15 | - | SLC12A8 | | - |
| exon-exon | RPS6KB1 | 17 | + | VMP1 | 17 | + |
| exon-exon | RALBP1 | 18 | + | TWSG1 | | + |
| exon-exon | IKZF1 | 7 | + | LRBA | 4 | - |
| exon-exon | DIP2B | | + | RTTN | 18 | - |
| exon-exon | CTDSP2 | 12 | - | COL15A1 | 9 | + |
| exon-exon | FGFR3 | 4 | + | TACC3 | 4 | + |
| exon-exon | RORA | 15 | - | CLSTN2 | 3 | + |
| exon-exon | GDI2 | 10 | - | CPVL | 7 | - |
| exon-exon | LIN9 | 1 | - | KDM5B | 1 | - |
| exon-exon | VPS53 | 17 | - | GLOD4 | 17 | - |
| exon-exon | LYN | 8 | + | TGS1 | 8 | + |
| exon-exon | TSFM | 12 | + | NUP107 | 12 | + |
| exon-exon | TBC1D30 | | + | PPM1H | 12 | - |
| exon-exon | PPM1H | 12 | - | RAP1B | 12 | + |
| exon-exon | PPM1H | 12 | - | MDM2 | 12 | + |
| exon-exon | VPS52 | 6 | - | MSH5-SAPCD1 | 6 | + |
| exon-exon | NUP107 | 12 | + | CYP27B1 | | - |
| exon-exon | MDM2 | 12 | + | PPM1H | 12 | - |
| exon-exon | MDM2 | 12 | + | EGFR | 7 | + |
| exon-exon | HOXC10 | | + | PYM1 | 12 | - |
| exon-exon | GNS | 12 | - | NUP107 | 12 | + |
| exon-exon | EGFR | 7 | + | PPM1H | 12 | - |
| exon-exon | EGFR | 7 | + | GNS | 12 | - |
| exon-exon | ZC3H18 | 16 | + | CHMP1A | 16 | - |
| exon-exon | PPL | 16 | - | SEC14L5 | 16 | + |
| exon-exon | NFASC | 1 | + | PRELP | 1 | + |
| exon-exon | COA1 | 7 | - | HECW1 | 7 | + |
| exon-exon | COX14 | 12 | + | SPATS2 | | + |
| exon-exon | ARID1A | 1 | + | RNF31 | 14 | + |
| exon-exon | PDZRN4 | | + | CPM | 12 | - |
| exon-exon | UBXN2A | 2 | + | NIPSNAP2 | 7 | + |
| exon-exon | LANCL2 | | + | PEX1 | 7 | - |
| exon-exon | LMO7 | 13 | + | UCHL3 | 13 | + |
| exon-exon | CASD1 | 7 | + | VWC2 | | + |
| exon-exon | ZNF610 | | + | RALA | 7 | + |
| exon-exon | ZNF550 | 19 | - | CXCL17 | 19 | - |
| exon-exon | ZNF544 | 19 | + | AP2A1 | 19 | + |
| exon-exon | LINC00265 | | + | ANLN | 7 | + |
| exon-exon | JAZF1 | 7 | - | CPT1C | | + |
| exon-exon | HIBADH | 7 | - | SUGCT | 7 | + |
| exon-exon | EIF3K | 19 | + | CIC | 19 | + |
| exon-exon | REPS1 | 6 | - | ELMO1 | 7 | - |
| exon-exon | SCAF1 | 19 | + | TRAPPC6A | 19 | - |
| exon-exon | RBMS2 | 12 | + | LITAF | 16 | - |
| exon-exon | PLEKHA6 | 1 | - | DTX3 | | + |
| exon-exon | NFASC | 1 | + | SOX13 | 1 | + |
| exon-exon | NAT8L | | + | DBNDD1 | | - |
| exon-exon | R3HDM2 | 12 | - | MARS1 | 12 | + |
| exon-exon | EEF1AKMT3 | 12 | + | INHBE | | + |
| exon-exon | NFASC | 1 | + | NTRK1 | 1 | + |
| exon-exon | ZC3H7B | 22 | + | L3MBTL2 | 22 | + |
| exon-exon | NAP1L4 | 11 | - | UBE2R2 | 9 | + |
| exon-exon | TXNDC15 | | + | ARPC2 | 2 | + |
| exon-exon | TMEM161B | | - | LINC00461 | 5 | - |
| exon-exon | CSKMT | | + | DPF2 | 11 | + |
| exon-exon | ARHGAP21 | 10 | - | ENKUR | | - |
| exon-exon | APBA2 | | + | CHD4 | 12 | - |
| exon-exon | NELL2 | | - | OS9 | 12 | + |
| exon-exon | ARID1B | 6 | + | TIAM2 | 6 | + |
| exon-exon | LHPP | 10 | + | FANK1 | 10 | + |
| exon-exon | CSNK2A1 | 20 | - | SMARCA2 | 9 | + |
| exon-exon | ASTN2 | 9 | - | ARHGDIG | | + |
| exon-exon | SDF2L1 | 22 | + | DEPDC5 | 22 | + |
| exon-exon | FAM219A | 9 | - | POLN | | - |
| exon-exon | EGFR | 7 | + | SEC61G | 7 | - |
| exon-exon | EGFR | 7 | + | ERP44 | 9 | - |
| exon-exon | XRN1 | 3 | - | SMYD3 | 1 | - |
| exon-exon | SLC22A3 | 6 | + | ZDHHC14 | 6 | + |
| exon-exon | RHEB | | - | PRKAG2 | 7 | - |
| exon-exon | TRRAP | 7 | + | ANKRD12 | 18 | + |
| exon-exon | IRAK2 | | + | BRK1 | 3 | + |
| exon-exon | FCGRT | 19 | + | BCAT2 | 19 | - |
| exon-exon | ERRFI1 | 1 | - | VAMP3 | | + |
| exon-exon | CREB5 | 7 | + | KCNH2 | 7 | - |
| exon-exon | AGAP3 | 7 | + | JAZF1-AS1 | | + |
| exon-exon | TSFM | 12 | + | INHBE | | + |
| exon-exon | OS9 | 12 | + | KIF5A | 12 | + |
| exon-exon | CLEC16A | 16 | + | TXNDC11 | 16 | - |
| exon-exon | B4GALNT1 | | - | TSFM | 12 | + |
| exon-exon | SPG11 | 15 | - | EIF3J | 15 | + |
| exon-exon | FTL | 19 | + | SPP1 | 4 | + |
| exon-exon | SEC61G | | - | EGFR-AS1 | | - |
| exon-exon | PRKAR2A | 3 | - | SPINK8 | | - |
| exon-exon | CEP85L | 6 | - | SYTL3 | 6 | + |
| exon-exon | ARIH2 | 3 | + | CAMP | | + |
| exon-exon | SENP3-EIF4A1 | 17 | + | PHOSPHO1 | | - |
| exon-exon | FKBP8 | 19 | - | SLC1A6 | 19 | - |
| exon-exon | ADAM17 | 2 | - | NHEJ1 | | - |
| exon-exon | PGD | 1 | + | CAMTA1 | 1 | + |
| exon-exon | PCCA | 13 | + | PIBF1 | | + |
| exon-exon | NOL9 | 1 | - | ACOT7 | 1 | - |
| exon-exon | GRHL2 | 8 | + | NFU1 | 2 | - |
| exon-exon | GRHL2 | 8 | + | MAP2K2 | 19 | - |
| exon-exon | CLRN3 | | - | SP1 | 12 | + |
| exon-exon | BMP2K | | + | NCOR2 | 12 | - |
| exon-exon | RASA2 | 3 | + | HSP90AB1 | 6 | + |
| exon-exon | BIRC6 | 2 | + | TTC27 | 2 | + |
| exon-exon | ANO9 | 11 | - | TFAP4 | | - |
| exon-exon | ADAP1 | 7 | - | PRKAR1B | 7 | - |
| exon-exon | USP12 | | - | SRCAP | 16 | + |
| exon-exon | LAMA3 | 18 | + | JUP | 17 | - |
| exon-exon | ISY1-RAB43 | 3 | - | AXL | 19 | + |
| exon-exon | EPC1 | 10 | - | SNX5 | 20 | - |
| exon-exon | DDRGK1 | | - | SLFNL1 | | - |
| exon-exon | TXNRD1 | 12 | + | UIMC1 | 5 | - |
| exon-exon | SEPTIN11 | 4 | + | SHROOM3 | 4 | + |
| exon-exon | PTMA | 2 | + | DZIP3 | 3 | + |
| exon-exon | RLF | 1 | + | MACF1 | 1 | + |
| exon-exon | GOPC | | - | ROS1 | 6 | - |
| exon-exon | CEP85L | 6 | - | ROS1 | 6 | - |
| exon-exon | SDC4 | 20 | - | ROS1 | 6 | - |
| exon-exon | SDC4 | 20 | - | ROS1 | 6 | - |
| exon-exon | GOPC | | - | ROS1 | 6 | - |
| exon-exon | KLC1 | 14 | + | ROS1 | 6 | - |
| exon-exon | INMT-MINDY4 | 7 | + | CREB5 | 7 | + |
| exon-exon | ACSL3 | | + | ETV1 | 7 | - |
| exon-exon | ACTB | 7 | - | GLI1 | | + |
| exon-exon | AGAP3 | 7 | + | CDK5 | | - |
| exon-exon | SUN2 | 22 | - | THBS1 | 15 | + |
| exon-exon | MYO1C | 17 | - | SNW1 | 14 | - |
| exon-exon | MKNK1 | 1 | - | SEM1 | 7 | - |
| exon-exon | INPPL1 | 11 | + | CD2BP2 | 16 | - |
| exon-exon | DDOST | 1 | - | RAN | 12 | + |
| exon-exon | FBXL15 | 10 | + | FASN | 17 | - |
| exon-exon | ERC1 | 12 | + | SYCP2 | 20 | - |
| exon-exon | CMTM7 | 3 | + | PPAN-P2RY11 | 19 | + |
| exon-exon | SHE | | - | P3H3 | | + |
| exon-exon | F11R | 1 | - | HPRT1 | X | + |
| exon-exon | PRRG2 | | + | KASH5 | 19 | + |
| exon-exon | NCBP3 | 17 | - | PPM1E | 17 | + |
| exon-exon | ABR | 17 | - | FMNL1 | 17 | + |
| exon-exon | GTPBP4 | 10 | + | KCMF1 | 2 | + |
| exon-exon | METTL2A | 17 | + | EFCAB3 | 17 | + |
| exon-exon | EDF1 | 9 | - | NPDC1 | 9 | - |
| exon-exon | ZMIZ1 | 10 | + | BPGM | 7 | + |
| exon-exon | XRCC5 | 2 | + | HTR2B | | - |
| exon-exon | SERPINE2 | 2 | - | XRCC5 | 2 | + |
| exon-exon | C11orf58 | 11 | + | ZNF619 | 3 | + |
| exon-exon | RBBP5 | 1 | - | GSPT1 | 16 | - |
| exon-exon | PRMT9 | 4 | - | LRBA | 4 | - |
| exon-exon | CENPL | | - | HINT1 | 5 | - |
| exon-exon | ZNRD2 | 11 | + | STRN4 | 19 | - |
| exon-exon | SDF4 | 1 | - | MYC | 8 | + |
| exon-exon | TMEM135 | 11 | + | ZNF829 | 19 | - |
| exon-exon | PKN1 | 19 | + | ASH1L | 1 | - |
| exon-exon | RCN1 | 11 | + | DNAJC24 | 11 | + |
| exon-exon | MTDH | 8 | + | FAM167A-AS1 | 8 | + |
| exon-exon | JHY | | + | EIF3D | 22 | - |
| exon-exon | CDON | 11 | - | GPD1L | 3 | + |
| exon-exon | TIRAP | | + | DCPS | 11 | + |
| exon-exon | MELTF | 3 | - | DVL1 | | - |
| exon-exon | ADGRA2 | 8 | + | PRAMEF17 | | + |
| exon-exon | EXT1 | 8 | - | DCTN6 | 8 | + |
| exon-exon | DHPS | 19 | - | RPS9 | 19 | + |
| exon-exon | DCUN1D2 | 13 | - | TFDP1 | 13 | + |
| exon-exon | DGLUCY | 14 | + | MTDH | 8 | + |
| exon-exon | FAM167A-AS1 | | + | POP1 | | + |
| exon-exon | NR2F6 | 19 | - | ANO8 | | - |
| exon-exon | PARD3 | 10 | - | KDM3A | 2 | + |
| exon-exon | TBC1D8 | 2 | - | KIF14 | | - |
| exon-exon | NHLRC4 | 16 | + | PIGQ | 16 | + |
| exon-exon | DDX10 | 11 | + | YAP1 | 11 | + |
| exon-exon | UNKL | 16 | - | CLCN7 | 16 | - |
| exon-exon | PRRC2B | 9 | + | NCOR2 | 12 | - |
| exon-exon | PDCD11 | 10 | + | TAF5 | 10 | + |
| exon-exon | NR6A1 | 9 | - | PSMB7 | 9 | - |
| exon-exon | ABCA8 | 17 | - | ASTN2 | 9 | - |
| exon-exon | EPG5 | 18 | - | PARVB | 22 | + |
| exon-exon | GPC4 | X | - | GPC3 | X | - |
| exon-exon | ZNF800 | 7 | - | SND1 | 7 | + |
| exon-exon | SSH2 | 17 | - | EFCAB5 | 17 | + |
| exon-exon | SCAI | | - | PSMB7 | 9 | - |
| exon-exon | EHD2 | 19 | + | SNTG2 | 2 | + |
| exon-exon | LAMB1 | 7 | - | LAMB4 | | - |
| exon-exon | PRKCG | | + | CAV1 | 7 | + |
| exon-exon | POLR3H | 22 | - | C10orf105 | | - |
| exon-exon | LINC01118 | | + | LINC01119 | | + |
| exon-exon | NF1 | 17 | + | EVI2A | 17 | - |
| exon-exon | CARF | 2 | + | TGS1 | 8 | + |
| exon-exon | AGRN | 1 | + | UBE2J2 | 1 | - |
| exon-exon | LOC100506911 | | + | KDM1B | 6 | + |
| exon-exon | DOP1B | 21 | + | MORC3 | | + |
| exon-exon | DOP1B | 21 | + | MORC3 | | + |
| exon-exon | SYMPK | 19 | - | TOM1L2 | 17 | - |
| exon-exon | KYNU | 2 | + | LOC645139 | 17 | + |
| exon-exon | SLC2A11 | 22 | + | MIF | 22 | + |
| exon-exon | SLC2A11 | 22 | + | MIF | 22 | + |
| exon-exon | ATXN2L | 16 | + | SNX31 | | - |
| exon-exon | TAB1 | 22 | + | MIEF1 | 22 | + |
| exon-exon | TAB1 | 22 | + | MIEF1 | 22 | + |
| exon-exon | PPDPF | 20 | + | UBAP2L | 1 | + |
| exon-exon | CERK | | - | ELP6 | 3 | - |
| exon-exon | C22orf34 | | - | CYP3A4 | 7 | - |
| exon-exon | DIAPH3 | 13 | - | GPA33 | 1 | - |
| exon-exon | PKM | 15 | - | SNRNP200 | 2 | - |
| exon-exon | MAP3K1 | | + | NDUFAF2 | 5 | + |
| exon-exon | MAP4 | 3 | - | HGSNAT | 8 | + |
| exon-exon | LZTR1 | | + | MIF4GD | | - |
| exon-exon | CSNK2B | 6 | + | MICA | 6 | + |
| exon-exon | ZC3H7B | 22 | + | L3MBTL2 | 22 | + |
| exon-exon | DNAJC19 | | - | DYNC1I1 | 7 | + |
| exon-exon | RLF | 1 | + | NDUFS5 | | + |
| exon-exon | PODXL2 | | + | PCM1 | 8 | + |
| exon-exon | MACF1 | 1 | + | RLF | | + |
| exon-exon | HNRNPM | 19 | + | CBX1 | 17 | - |
| exon-exon | EBF1 | 5 | - | ING3 | 7 | + |
| exon-exon | GPT2 | 16 | + | SH3BGRL | X | + |
| exon-exon | NHSL1 | 6 | - | UMAD1 | 7 | + |
| exon-exon | CCDC12 | 3 | - | IQSEC1 | 3 | - |
| exon-exon | AXIN1 | 16 | - | HDAC8 | X | - |
| exon-exon | AKIRIN1 | 1 | + | PPIE | 1 | + |
| exon-exon | SGPL1 | 10 | + | ADAMTS14 | | + |
| exon-exon | PHACTR2 | 6 | + | ZC2HC1B | 6 | + |
| exon-exon | NKD1 | | + | ADCY7 | 16 | + |
| exon-exon | ATP1B1 | 1 | + | PCDHA10 | | + |
| exon-exon | MEGF6 | | - | UBE2I | 16 | + |
| exon-exon | LRCH3 | 3 | + | FYTTD1 | 3 | + |
| exon-exon | GRAMD4 | | + | GTSE1 | 22 | + |
| exon-exon | CHN1 | 2 | - | SOGA3 | 6 | - |
| exon-exon | CACHD1 | 1 | + | ROR1 | 1 | + |
| exon-exon | ATG7 | 3 | + | SLC9A9 | | - |
| exon-exon | ASH1L | 1 | - | RIT1 | | - |
| exon-exon | ZNF543 | | + | ZNF8-ERVK3-1 | 19 | + |
| exon-exon | ZC3H4 | 19 | - | ZNF8-ERVK3-1 | 19 | + |
| exon-exon | VPS26A | 10 | + | KIFBP | 10 | + |
| exon-exon | TSC22D3 | X | - | GRIK5 | | - |
| exon-exon | PPP2R1A | 19 | + | SULT2A1 | | - |
| exon-exon | EPHA2 | | - | FBXO42 | 1 | - |
| exon-exon | DNM3 | | + | COP1 | 1 | - |
| exon-exon | SLC2A1 | 1 | - | TSPAN1 | 1 | + |
| exon-exon | SHANK3 | 22 | + | PPP6R2 | 22 | + |
| exon-exon | PRDX3 | 10 | - | TIAL1 | 10 | - |
| exon-exon | PDLIM5 | 4 | + | SMARCAD1 | 4 | + |
| exon-exon | MYCBP2 | 13 | - | N4BP2L2 | 13 | - |
| exon-exon | HTATIP2 | 11 | + | SUPT20H | 13 | - |
| exon-exon | SMPDL3A | | + | TNIK | 3 | - |
| exon-exon | MRC2 | 17 | + | MAP3K3 | 17 | + |
| exon-exon | C2CD5 | | - | PKP2 | 12 | - |
| exon-exon | DIPK2A | 3 | + | CLVS2 | | + |
| exon-exon | RNF135 | | + | C17orf78 | | + |
| exon-exon | SMURF2 | 17 | - | LRRC37A3 | 17 | - |
| exon-exon | ZNF252P | | - | ANKLE2 | 12 | - |
| exon-exon | CREBBP | 16 | - | SLX4 | | - |
| exon-exon | PHB | 17 | - | SPOP | 17 | - |
| exon-exon | EXOSC2 | 9 | + | ASS1 | 9 | + |
| exon-exon | ATP6V1E1 | 22 | - | NUDT1 | | + |
| exon-exon | KIRREL3 | 11 | - | HNRNPUL1 | 19 | + |
| exon-exon | RNF115 | 1 | - | ARNTL2 | | + |
| exon-exon | GAS6 | | - | DYSF | 2 | + |
| exon-exon | SHPK | 17 | - | P2RX5-TAX1BP3 | 17 | - |
| exon-exon | UBQLN1 | 9 | - | GKAP1 | 9 | - |
| exon-exon | SRCAP | 16 | + | ZNF524 | | + |
| exon-exon | RANGAP1 | 22 | - | L3MBTL2 | 22 | + |
| exon-exon | PPHLN1 | 12 | + | PAX3 | 2 | - |
| exon-exon | OSBP2 | 22 | + | NIPSNAP1 | 22 | - |
| exon-exon | FAM230C | | + | ZNF607 | 19 | - |
| exon-exon | MCU | 10 | + | JMJD1C | 10 | - |
| exon-exon | HERPUD2 | 7 | - | SEPTIN7 | 7 | + |
| exon-exon | GALNT7 | | + | CMAS | 12 | + |
| exon-exon | CRIM1 | 2 | + | FEZ2 | 2 | - |
| exon-exon | ATF6B | 6 | - | KRTCAP2 | 1 | - |
| exon-exon | ACO1 | | + | APTX | 9 | - |
| exon-exon | ZC3H11A | 1 | + | NCL | 2 | - |
| exon-exon | SETD2 | 3 | - | SMG6 | 17 | - |
| exon-exon | SDHAF2 | 11 | + | TMEM258 | 11 | - |
| exon-exon | MXD3 | 5 | - | PYCR2 | | - |
| exon-exon | NEMF | 14 | - | L2HGDH | 14 | - |
| exon-exon | PKP4 | 2 | + | ZNF548 | 19 | + |
| exon-exon | PARVA | 11 | + | MICAL2 | 11 | + |
| exon-exon | LRRFIP2 | 3 | - | MLH1 | 3 | + |
| exon-exon | LRP11 | 6 | - | FSD1 | 19 | + |
| exon-exon | GPALPP1 | 13 | + | GTF2F2 | | + |
| exon-exon | HNRNPA2B1 | 7 | - | CBX3 | 7 | + |
| exon-exon | DNAJB1 | 19 | - | ATP13A1 | 19 | - |
| exon-exon | AGPAT4 | 6 | - | PRKN | 6 | - |
| exon-exon | RPS6KB1 | 17 | + | VMP1 | 17 | + |
| exon-exon | KAT5 | | + | RASIP1 | 19 | - |
| exon-exon | SRSF9 | 12 | - | KDM4C | 9 | + |
| exon-exon | FRMD4A | 10 | - | SYNPO | | + |
| exon-exon | CA12 | | - | NDUFA6 | 22 | - |
| exon-exon | SAMD4B | 19 | + | ECH1 | 19 | - |
| exon-exon | PGAP3 | 17 | - | GSDMB | 17 | - |
| exon-exon | NSUN4 | 1 | + | NCCRP1 | | + |
| exon-exon | CDH23 | | + | FAM110D | | + |
| exon-exon | VSIR | 10 | - | CDH23 | 10 | + |
| exon-exon | ZDHHC7 | | - | RPL23 | 17 | - |
| exon-exon | VWA8 | 13 | - | LHFPL6 | 13 | - |
| exon-exon | MRRF | 9 | + | ELP1 | 9 | - |
| exon-exon | GXYLT1 | | - | PPHLN1 | 12 | + |
| exon-exon | DIP2A | 21 | + | KCNE1 | | - |
| exon-exon | ZNF771 | 16 | + | PARVA | 11 | + |
| exon-exon | UBR4 | 1 | - | CDKN1A | 6 | + |
| exon-exon | PARVA | 11 | + | ZNF771 | 16 | + |
| exon-exon | HOOK2 | 19 | - | CPAMD8 | 19 | - |
| exon-exon | FRYL | 4 | - | OCIAD2 | | - |
| exon-exon | FOXRED2 | | - | EIF3D | 22 | - |
| exon-exon | HNRNPA2B1 | 7 | - | LMO7 | 13 | + |
| exon-exon | ELP1 | 9 | - | MRRF | 9 | + |
| exon-exon | PRELID2 | | - | LARS1 | 5 | - |
| exon-exon | MPZL1 | 1 | + | UCK2 | 1 | + |
| exon-exon | ZNF277 | 7 | + | IFRD1 | 7 | + |
| exon-exon | TMEM233 | | + | BORCS5 | 12 | + |
| exon-exon | SP140L | | + | ITM2C | 2 | + |
| exon-exon | EEF1G | 11 | - | MTA2 | 11 | - |
| exon-exon | CREBL2 | 12 | + | CPNE1 | 20 | - |
| exon-exon | GOLM2 | 15 | + | SORD | 15 | + |
| exon-exon | SCARF2 | 22 | - | DPPA2 | | - |
| exon-exon | HACE1 | | - | PPRC1 | 10 | + |
| exon-exon | JTB | 1 | - | SNAPIN | | + |
| exon-exon | FNDC3A | 13 | + | SETDB2-PHF11 | 13 | + |
| exon-exon | FARP1 | 13 | + | STK24 | 13 | - |
| exon-exon | EBPL | 13 | - | KPNA3 | 13 | - |
| exon-exon | CNOT2 | 12 | + | PTPRR | | - |
| exon-exon | CHTOP | 1 | + | RAB13 | 1 | - |
| exon-exon | VGLL4 | 3 | - | PRKG1 | 10 | + |
| exon-exon | ST7 | 7 | + | SREBF1 | 17 | - |
| exon-exon | SNX9 | 6 | + | CYP2C19 | | + |
| exon-exon | GPS2 | 17 | - | MPP2 | 17 | - |
| exon-exon | FBXW11 | 5 | - | NPM1 | 5 | + |
| exon-exon | RPS6KB1 | 17 | + | VMP1 | 17 | + |
| exon-exon | RPS24 | 10 | + | CAMK2G | 10 | - |
| exon-exon | PRR11 | 17 | + | SNRPEP4 | 19 | - |
| exon-exon | DNMT1 | 19 | - | RAVER1 | 19 | - |
| exon-exon | ATMIN | 16 | + | BCL2L1 | | - |
| exon-exon | BAIAP2 | 17 | + | SLC16A3 | 17 | + |
| exon-exon | UPF3A | 13 | + | OSBPL9 | 1 | + |
| exon-exon | RHOD | | + | RPLP0 | 12 | - |
| exon-exon | ERF | 19 | - | NOC4L | 12 | + |
| exon-exon | JMY | | + | EPS8L2 | 11 | + |
| exon-exon | ITSN2 | 2 | - | SMIM14 | 4 | - |
| exon-exon | AGRN | 1 | + | AKT1 | 14 | - |
| exon-exon | ARMC9 | 2 | + | PSMD1 | 2 | + |
| exon-exon | PPT2-EGFL8 | 6 | + | CLIC1 | 6 | - |
| exon-exon | SUPT6H | 17 | + | DTYMK | | - |
| exon-exon | RAD54B | 8 | - | BRIP1 | | - |
| exon-exon | IRF1-AS1 | 5 | + | SLC22A5 | 5 | + |
| exon-exon | ARID1B | 6 | + | SNX9 | 6 | + |
| exon-exon | ANP32E | 1 | - | ANP32B | 9 | + |
| exon-exon | ROBO2 | 3 | + | CADM2 | | + |
| exon-exon | FAM234B | 12 | + | GPRC5A | 12 | + |
| exon-exon | DNM1 | 9 | + | TRIO | 5 | + |
| exon-exon | CSNK1A1 | 5 | - | LAMTOR2 | 1 | + |
| exon-exon | CHST11 | 12 | + | SLC41A2 | | - |
| exon-exon | CEP72 | | + | EXOC3 | 5 | + |
| exon-exon | RABL6 | 9 | + | CDC16 | 13 | + |
| exon-exon | ATG16L1 | | + | INPP5D | | + |
| exon-exon | ZNF367 | 9 | - | CDC14B | 9 | - |
| exon-exon | AKAP12 | 6 | + | MTHFD1L | 6 | + |
| exon-exon | PPL | 16 | - | SEC14L5 | 16 | + |
| exon-exon | ANP32A | 15 | - | SURF4 | 9 | - |
| exon-exon | ACTB | 7 | - | RELA | 11 | - |
| exon-exon | WDFY3 | 4 | - | NAV3 | | + |
| exon-exon | PSMA1 | 11 | - | MYH9 | 22 | - |
| exon-exon | RABGGTB | 1 | + | HDLBP | 2 | - |
| exon-exon | TPST1 | 7 | + | APC | 5 | + |
| exon-exon | SLC33A1 | 3 | - | PLCH1 | | - |
| exon-exon | VPS35 | 16 | - | MYLK3 | 16 | - |
| exon-exon | GALE | | - | MPHOSPH8 | 13 | + |
| exon-exon | CHD2 | 15 | + | STARD9 | | + |
| exon-exon | STAU1 | 20 | - | PREX1 | 20 | - |
| exon-exon | SLC37A1 | 21 | + | LTN1 | | - |
| exon-exon | PEX5 | 12 | + | LPL | 8 | + |
| exon-exon | NOL9 | 1 | - | DNAJC11 | 1 | - |
| exon-exon | RMDN3 | 15 | - | RAD51 | | + |
| exon-exon | CYB5B | 16 | + | PMFBP1 | | - |
| exon-exon | POLRMT | 19 | - | PALM | 19 | + |
| exon-exon | ANAPC10 | 4 | - | OTUD4 | 4 | - |
| exon-exon | THADA | 2 | - | DYTN | | - |
| exon-exon | PAX5 | 9 | - | MLLT3 | 9 | - |
| exon-exon | OLA1 | 2 | - | LRRFIP1 | 2 | + |
| exon-exon | LOC153893 | | + | UTP6 | | - |
| exon-exon | TERT | | - | ALK | 2 | - |
| exon-exon | PPM1D | | + | C17orf64 | | + |
| exon-exon | TBX4 | | + | LUC7L2 | 7 | + |
| exon-exon | PDK1 | 2 | + | DLX2 | | - |
| exon-exon | GDA | 9 | + | C9orf85 | | + |
| exon-exon | PIP5K1A | | + | SCNM1 | 1 | + |
| exon-exon | GYS1 | 19 | - | PPFIA3 | 19 | + |
| exon-exon | FGFR2 | 10 | - | ACADSB | 10 | + |
| exon-exon | CTBP1 | 4 | - | ATF6 | 1 | + |
| exon-exon | SLC3A2 | 11 | + | POLR2G | 11 | + |
| exon-exon | DCBLD2 | 3 | - | PATJ | 1 | + |
| exon-exon | PCNP | 3 | + | OSBPL3 | 7 | - |
| exon-exon | ANXA4 | 2 | + | NUMB | 14 | - |
| exon-exon | PMM2 | 16 | + | ABAT | 16 | + |
| exon-exon | NRP1 | 10 | - | ITGB1 | 10 | - |
| exon-exon | C3 | 19 | - | NME1-NME2 | 17 | + |
| exon-exon | NF1 | 17 | + | TXNL4A | 18 | - |
| exon-exon | GALNT7 | | + | SAP30 | | + |
| exon-exon | CLTC | 17 | + | VMP1 | 17 | + |
| exon-exon | CALM2P2 | | + | BTAF1 | 10 | + |
| exon-exon | STX3 | 11 | + | ATP5F1A | 18 | - |
| exon-exon | SLC19A2 | 1 | - | DCAF6 | 1 | + |
| exon-exon | SIK1 | | - | FSCN1 | 7 | + |
| exon-exon | PCID2 | 13 | - | CUL4A | 13 | + |
| exon-exon | MYO10 | 5 | - | RETREG1 | 5 | - |
| exon-exon | NOP58 | 2 | + | GPR157 | 1 | - |
| exon-exon | NIBAN2 | 9 | - | ZER1 | 9 | - |
| exon-exon | WNK1 | 12 | + | ERC1 | 12 | + |
| exon-exon | RBM17 | 10 | + | TOP2A | 17 | - |
| exon-exon | EIF3B | 7 | + | HSP90AA1 | 14 | - |
| exon-exon | E2F3 | 6 | + | CDKAL1 | 6 | + |
| exon-exon | ST7 | 7 | + | TRIM24 | 7 | + |
| exon-exon | ABCC1 | 16 | + | NFATC2IP | 16 | + |
| exon-exon | SLC22A23 | 6 | - | CDKAL1 | 6 | + |
| exon-exon | PMM2 | 16 | + | ABAT | 16 | + |
| exon-exon | PBX3 | 9 | + | GLE1 | 9 | + |
| exon-exon | CHAF1A | 19 | + | KDM4B | 19 | + |
| exon-exon | P4HB | 17 | - | PTMAP5 | 13 | + |
| exon-exon | METAP1 | 2 | + | EIF4E | 4 | - |
| exon-exon | HMCES | 3 | + | MECOM | 3 | - |
| exon-exon | AGRN | 1 | + | PGAP6 | 16 | - |
| exon-exon | TRIP6 | 7 | + | RPL13AP5 | 10 | + |
| exon-exon | WNK1 | 12 | + | ERC1 | 12 | + |
| exon-exon | SDHA | | + | GTPBP10 | 7 | + |
| exon-exon | ESYT2 | 7 | - | PTPRN2 | 7 | - |
| exon-exon | CUL1 | 7 | + | BRAF | 7 | - |
| exon-exon | ATXN7L1 | 7 | - | GRM8 | 7 | - |
| exon-exon | CENPK | | - | CHMP1A | 16 | - |
| exon-exon | ADCY9 | 16 | - | PATE3 | | + |
| exon-exon | TMEM104 | 17 | + | SLC9A3R1 | 17 | + |
| exon-exon | THSD4 | 15 | + | LRRC49 | | + |
| exon-exon | SLC35E3 | 12 | + | NUP107 | 12 | + |
| exon-exon | UCK2 | 1 | + | SELL | | - |
| exon-exon | MTSS1 | 8 | - | WASHC5 | 8 | - |
| exon-exon | LARP4 | 12 | + | DIP2B | 12 | + |
| exon-exon | GTPBP10 | 7 | + | PDS5B | 13 | + |
| exon-exon | CSTF3 | | - | CAPRIN1 | 11 | + |
| exon-exon | WNK1 | 12 | + | ELOA | 1 | + |
| exon-exon | TMEM184C | 4 | + | ARHGAP10 | 4 | + |
| exon-exon | MTA3 | 2 | + | ABCG8 | | + |
| exon-exon | BAIAP2 | 17 | + | SLC38A10 | 17 | - |
| exon-exon | NSD3 | 8 | - | ADAM18 | 8 | + |
| exon-exon | VRK2 | 2 | + | FUS | 16 | + |
| exon-exon | MTDH | 8 | + | TRHR | | + |
| exon-exon | KCNC2 | 12 | - | CAPS2 | | - |
| exon-exon | GPR107 | 9 | + | BRAT1 | | - |
| exon-exon | PRORP | | + | ARHGAP5 | | + |
| exon-exon | ERBB2 | 17 | + | GSE1 | 16 | + |
| exon-exon | CDH26 | | + | PPM1A | 14 | + |
| exon-exon | TSPAN1 | 1 | + | TMEM59 | 1 | - |
| exon-exon | TCEANC2 | 1 | + | AP2A1 | 19 | + |
| exon-exon | RPL13A | 19 | + | SSBP3 | 1 | - |
| exon-exon | PUF60 | 8 | - | SURF2 | | + |
| exon-exon | FLVCR1 | 1 | + | CDC42BPA | 1 | - |
| exon-exon | PIK3R3 | 1 | - | AP2A1 | 19 | + |
| exon-exon | NFIA | 1 | + | SCP2 | | + |
| exon-exon | HNRNPR | 1 | - | TXLNA | 1 | + |
| exon-exon | FGGY | 1 | + | SLC1A7 | | - |
| exon-exon | ARHGAP29 | 1 | - | COL24A1 | | - |
| exon-exon | SRSF5 | 14 | + | NKAIN2 | 6 | + |
| exon-exon | SRSF11 | 1 | + | FUS | 16 | + |
| exon-exon | PLPBP | 8 | + | SET | 9 | + |
| exon-exon | PROM1 | 4 | - | TAPT1 | 4 | - |
| exon-exon | POLDIP3 | 22 | - | CYB5R3 | 22 | - |
| exon-exon | ZNF324 | | + | NEO1 | 15 | + |
| exon-exon | HARS2 | 5 | + | SEC11C | 18 | + |
| exon-exon | DNAJC24 | | + | IMMP1L | 11 | - |
| exon-exon | POLR1A | 2 | - | AFF3 | 2 | - |
| exon-exon | NFX1 | 9 | + | BAG1 | 9 | - |
| exon-exon | WDR20 | 14 | + | DYNC1H1 | 14 | + |
| exon-exon | TUFT1 | 1 | + | ACBD6 | | - |
| exon-exon | SS18L1 | 20 | + | TAF4 | 20 | - |
| exon-exon | SKIL | | + | MECOM | 3 | - |
| exon-exon | RNF213 | 17 | + | CA11 | | - |
| exon-exon | PYGO1 | 15 | - | MAPK6 | 15 | + |
| exon-exon | RPL13AP5 | 10 | + | KASH5 | 19 | + |
| exon-exon | PRKCI | 3 | + | MECOM | 3 | - |
| exon-exon | MICOS10 | 1 | + | QARS1 | 3 | - |
| exon-exon | LMF2 | 22 | - | TYMP | 22 | - |
| exon-exon | APTX | 9 | - | NOL6 | 9 | - |
| exon-exon | SUGP2 | 19 | - | ARMC6 | 19 | + |
| exon-exon | NTN4 | | - | SPG7 | 16 | + |
| exon-exon | GNPTG | 16 | + | NUBP2 | | + |
| exon-exon | RPS6KL1 | | - | PSMA7 | 20 | - |
| exon-exon | RAPGEF1 | 9 | - | SUGT1P4-STRA6LP-CCDC180 | 9 | + |
| exon-exon | HMGN2P46 | 15 | + | ETV1 | 7 | - |
| intron-exon | TMPRSS2 | 21 | - | ETV5 | 3 | - |
| exon-exon | MS4A6E | 11 | + | MS4A14 | 11 | + |
| exon-intron | SNRNP27 | 2 | + | MXD1 | 2 | + |
| exon-intron | OARD1 | 6 | - | APOBEC2 | 6 | - |
| exon-exon | ZC3H10 | 12 | + | ESYT1 | 12 | + |
| exon-exon | MXD1 | 2 | - | SNRNP27 | 2 | - |
| exon-exon | LMAN2 | 5 | - | MXD3 | 5 | - |
| exon-intron | RAD54L2 | 3 | + | TEX264 | 3 | + |
| exon-exon | CCDC77 | 12 | + | B4GALNT3 | 12 | + |
| exon-exon | HEXA | 15 | - | CELF6 | 15 | - |
| exon-exon | TNFSF13 | 17 | - | TNFSF12 | 17 | - |
| exon-intron | PNISR | 6 | - | COQ3 | 6 | - |
| exon-exon | MAPK12 | 22 | - | HDAC10 | 22 | - |
| exon-exon | ELOVL1 | 1 | + | MED8 | 1 | + |
| exon-intron | NIPSNAP2 | 7 | - | MRPS17 | 7 | - |
| exon-exon | PCBP2 | 12 | - | PRR13 | 12 | - |
| exon-exon | ST14 | 11 | - | APLP2 | 11 | - |
| exon-intron | COPS5 | 8 | - | PPP1R42 | 8 | - |
| exon-intron | C1QTNF6 | 22 | - | Z82188.2 | 22 | - |
| exon-exon | LINC02816 | 1 | + | KIAA1614 | 1 | + |
| exon-intron | MCM9 | 6 | + | FAM184A | 6 | + |
| intron-exon | AC073517.1 | 7 | + | ORAI2 | 7 | + |
| intron-exon | FPGT | 1 | + | TNNI3K | 1 | + |
| exon-intron | S100A4 | 1 | + | LOC101928034 | 1 | + |
| exon-exon | GCN1 | 12 | + | RPLP0 | 12 | + |
| exon-intron | BTN3A3 | 6 | + | BTN2A1 | 6 | + |
| exon-exon | LOC105378843 | 1 | - | GBP4 | 1 | - |
| exon-exon | C7orf61 | 7 | + | TSC22D4 | 7 | + |
| exon-exon | C2orf42 | 2 | + | TIA1 | 2 | + |
| exon-exon | GBP5 | 1 | - | GBP4 | 1 | - |
| exon-exon | MS4A14 | 11 | - | MS4A6E | 11 | - |
| exon-exon | RAB43 | 3 | + | ISY1 | 3 | + |
| exon-intron | LINC00301 | 11 | + | MS4A8 | 11 | + |
| exon-intron | RFT1 | 3 | - | SFMBT1 | 3 | - |
| exon-exon | MXD3 | 5 | + | LMAN2 | 5 | + |
| exon-exon | GNMT | 6 | - | CNPY3 | 6 | - |
| exon-exon | C7orf61 | 7 | + | TSC22D4 | 7 | + |
| exon-exon | RNF185 | 22 | + | LIMK2 | 22 | + |
| exon-exon | ZNF781 | 19 | + | ZNF607 | 19 | + |
| exon-intron | MCM9 | 6 | + | FAM184A | 6 | + |
| exon-intron | CCDC28B | 1 | + | IQCC | 1 | + |
| exon-intron | SIGLEC11 | 19 | + | IL4I1 | 19 | + |
| exon-exon | SPDYA | 2 | - | PPP1CB | 2 | - |
| exon-intron | ZC3H10 | 12 | + | ESYT1 | 12 | + |
| exon-exon | EPHX1 | 1 | - | SRP9 | 1 | - |
| exon-exon | TINCR | 19 | + | SAFB2 | 19 | + |
| exon-exon | UCN2 | 3 | + | COL7A1 | 3 | + |
| exon-exon | SEC61A2 | 10 | - | DHTKD1 | 10 | - |
| exon-exon | LMAN2 | 5 | - | MXD3 | 5 | - |
| exon-exon | TP53RK | 20 | - | SLC13A3 | 20 | - |
| exon-intron | ARL2 | 11 | + | SNX15 | 11 | + |
| intron-exon | MS4A5 | 11 | + | MS4A1 | 11 | + |
| exon-exon | VAMP8 | 2 | + | VAMP5 | 2 | + |
| exon-intron | ARFGAP3 | 22 | + | PACSIN2 | 22 | + |
| exon-exon | PEX26 | 22 | + | TUBA8 | 22 | + |
| exon-intron | ZNF664 | 12 | + | ZNF664-RFLNA | 12 | + |
| exon-exon | HYAL2 | 3 | + | TUSC2 | 3 | + |
| exon-exon | IL18R1 | 2 | - | IL1RL1 | 2 | - |
| intron-exon | CLCA4-AS1 | 1 | + | CLCA3P | 1 | + |
| exon-intron | LMAN2 | 5 | - | MXD3 | 5 | - |
| exon-intron | RBM7 | 11 | + | AP002373.1 | 11 | + |
| exon-exon | COX17 | 3 | - | POPDC2 | 3 | - |
| exon-exon | MRPL53 | 2 | + | CCDC142 | 2 | + |
| exon-exon | BRK1 | 3 | + | VHL | 3 | + |
| exon-exon | HIGD1AP1 | 12 | + | CCDC13 | 3 | - |
| exon-exon | SYT17 | 16 | - | ITPRIPL2 | 16 | - |
| exon-exon | LOC105374197 | 3 | + | WDR49 | 3 | + |
| exon-exon | C7orf61 | 7 | + | TSC22D4 | 7 | + |
| exon-exon | NUDT3 | 6 | + | RPS10 | 6 | + |
| exon-exon | NCOA4 | 10 | + | MSMB | 10 | + |
| exon-exon | NUDT13 | 10 | + | ECD | 10 | + |
| exon-intron | CRCP | 7 | - | ASL | 7 | - |
| exon-intron | ZKSCAN7 | 3 | + | KRT8 | 12 | + |
| exon-exon | PRR13 | 12 | + | PCBP2 | 12 | + |
| exon-intron | S100A4 | 1 | + | LOC101928034 | 1 | + |
| exon-exon | LOC100287896 | 11 | + | POLD3 | 11 | + |
| exon-intron | ZKSCAN7 | 3 | + | ZNF660-ZNF197 | 3 | + |
| exon-exon | WDR49 | 3 | - | SERPINI2 | 3 | - |
| exon-exon | TRIM13 | 13 | + | KCNRG | 13 | + |
| exon-intron | PPP1R32 | 11 | - | SDHAF2 | 11 | - |
| intron-exon | MSMB | 10 | - | NCOA4 | 10 | - |
| exon-exon | MS4A6E | 11 | + | MS4A7 | 11 | + |
| exon-exon | XPR1 | 1 | + | KIAA1614 | 1 | + |
| exon-exon | TCTEX1D2 | 3 | - | PCYT1A | 3 | - |
| exon-exon | MRPS5 | 2 | + | ZNF514 | 2 | + |
| intron-exon | SPOCK1 | 5 | + | KLHL3 | 5 | + |
| exon-intron | PTAFR | 1 | + | DNAJC8 | 1 | + |
| exon-intron | BCO2 | 11 | - | SDHD | 11 | - |
| exon-exon | ATF2 | 2 | - | CHN1 | 2 | - |
| exon-exon | SLC13A3 | 20 | + | TP53RK | 20 | + |
| exon-exon | SLC13A3 | 20 | + | TP53RK | 20 | + |
| exon-intron | EIF4G2 | 11 | + | ZBED5 | 11 | + |
| exon-exon | SHC1 | 1 | - | PYGO2 | 1 | - |
| exon-exon | LIMK2 | 22 | - | RNF185 | 22 | - |
| exon-exon | ARPIN | 15 | - | AP3S2 | 15 | - |
| exon-exon | MTHFD2 | 2 | + | SLC4A5 | 2 | + |
| exon-exon | EEF1AKMT3 | 12 | + | TSFM | 12 | + |
| exon-exon | MCM9 | 6 | + | FAM184A | 6 | + |
| exon-exon | NETO2 | 16 | + | ITFG1 | 16 | + |
| exon-exon | BORCS7 | 10 | + | AS3MT | 10 | + |
| exon-intron | CUTC | 10 | - | COX15 | 10 | - |
| exon-exon | L1CAM | X | + | ARHGAP4 | X | + |
| intron-exon | AC105036.3 | 15 | + | SNUPN | 15 | + |
| exon-exon | GALNT8 | 12 | - | NDUFA9 | 12 | - |
| exon-exon | ZKSCAN7 | 3 | + | ZNF660-ZNF197 | 3 | + |
| exon-intron | CUTC | 10 | - | COX15 | 10 | - |
| exon-exon | RRS1 | 8 | + | ADHFE1 | 8 | + |
| exon-exon | TINCR | 19 | + | SAFB2 | 19 | + |
| exon-intron | LOC100287896 | 11 | + | POLD3 | 11 | + |
| exon-exon | PCMTD2 | 20 | - | MYT1 | 20 | - |
| exon-exon | KIAA1614 | 1 | - | LINC02816 | 1 | - |
| exon-intron | SRP9 | 1 | + | EPHX1 | 1 | + |
| exon-exon | LOC100630923 | 7 | + | ORAI2 | 7 | + |
| exon-exon | UNC5CL | 6 | + | TSPO2 | 6 | + |
| exon-exon | HLA-DMB | 6 | + | HLA-DMA | 6 | + |
| intron-exon | LOC107987267 | 19 | - | PCBP2 | 12 | + |
| exon-intron | STIMATE-MUSTN1 | 3 | - | ITIH4 | 3 | - |
| exon-exon | MRPL53 | 2 | + | CCDC142 | 2 | + |
| intron-exon | RAET1G | 6 | - | RAET1E | 6 | - |
| intron-exon | SFMBT1 | 3 | + | RFT1 | 3 | + |
| exon-exon | SLC13A3 | 20 | + | TP53RK | 20 | + |
| exon-intron | GALNT8 | 12 | - | NDUFA9 | 12 | - |
| intron-exon | AL358472.2 | 1 | + | RAB13 | 1 | + |
| exon-exon | GALT | 9 | + | IL11RA | 9 | + |
| exon-exon | ZC3H10 | 12 | + | ESYT1 | 12 | + |
| exon-exon | CSDE1 | 1 | + | SIKE1 | 1 | + |
| exon-exon | PCYT1A | 3 | + | TCTEX1D2 | 3 | + |
| exon-exon | ANKRD35 | 1 | - | PIAS3 | 1 | - |
| exon-exon | SLC39A1 | 1 | - | CRTC2 | 1 | - |
| exon-exon | PEX26 | 22 | + | TUBA8 | 22 | + |
| exon-intron | CRCP | 7 | - | AC068533.4 | 7 | - |
| exon-exon | MRPL33 | 2 | + | BABAM2 | 2 | + |
| exon-exon | AP3S2 | 15 | + | ARPIN | 15 | + |
| exon-exon | SIKE1 | 1 | - | CSDE1 | 1 | - |
| exon-exon | MS4A6E | 11 | + | MS4A14 | 11 | + |
| exon-exon | MSMB | 10 | - | NCOA4 | 10 | - |
| exon-exon | LINC00301 | 11 | + | MS4A8 | 11 | + |
| exon-exon | HLA-DMB | 6 | + | HLA-DMA | 6 | + |
| exon-exon | MOB1B | 4 | + | DCK | 4 | + |
| exon-intron | VAMP8 | 2 | + | VAMP5 | 2 | + |
| exon-exon | RFT1 | 3 | - | SFMBT1 | 3 | - |
| exon-intron | CCND1 | 11 | + | LTO1 | 11 | + |
| intron-exon | LOC112577599 | 1 | - | EXO5 | 1 | - |
| exon-exon | SAFB2 | 19 | - | TINCR | 19 | - |
| exon-intron | GGT1 | 22 | - | SNRPD3 | 22 | - |
| exon-intron | NSUN4 | 1 | + | FAAH | 1 | + |
| exon-exon | NSUN4 | 1 | + | FAAH | 1 | + |
| exon-exon | PM20D2 | 6 | - | PNRC1 | 6 | - |
| exon-exon | SKP1 | 5 | + | PPP2CA | 5 | + |
| exon-exon | CHRNA10 | 11 | + | NUP98 | 11 | + |
| exon-exon | PEX26 | 22 | + | TUBA8 | 22 | + |
| exon-exon | LOC100630923 | 7 | + | ORAI2 | 7 | + |
| exon-exon | LSM8 | 7 | + | ANKRD7 | 7 | + |
| intron-exon | PTPN9 | 15 | + | SNUPN | 15 | + |
| intron-exon | LOC101928053 | 11 | + | LOC112268072 | 11 | + |
| intron-exon | AL358472.2 | 1 | + | RAB13 | 1 | + |
| exon-exon | ZNF705A | 12 | - | CLEC4A | 12 | - |
| exon-exon | OTUB1 | 11 | - | COX8A | 11 | - |
| exon-exon | SSR1 | 6 | + | CAGE1 | 6 | + |
| exon-intron | CPLX3 | 15 | - | LMAN1L | 15 | - |
| exon-exon | IL11RA | 9 | - | GALT | 9 | - |
| exon-exon | UBE4A | 11 | + | ATP5MG | 11 | + |
| exon-exon | MS4A1 | 11 | - | MS4A5 | 11 | - |
| exon-exon | GALNT8 | 12 | - | NDUFA9 | 12 | - |
| exon-exon | SEC22A | 3 | - | PDIA5 | 3 | - |
| exon-exon | RAD54L2 | 3 | + | TEX264 | 3 | + |
| exon-exon | BCO2 | 11 | - | SDHD | 11 | - |
| exon-exon | SNRNP27 | 2 | + | MXD1 | 2 | + |
| exon-exon | ANKRD12 | 18 | - | NDUFV2 | 18 | - |
| exon-exon | ZNF649 | 19 | - | ZNF577 | 19 | - |
| exon-exon | KIAA1614 | 1 | - | XPR1 | 1 | - |
| exon-exon | PPP1R32 | 11 | - | SDHAF2 | 11 | - |
| exon-intron | ECD | 10 | - | NUDT13 | 10 | - |
| intron-exon | AIFM2 | 10 | + | TYSND1 | 10 | + |
| exon-exon | PPP1R32 | 11 | - | SDHAF2 | 11 | - |
| exon-exon | EFCAB11 | 14 | - | FOXN3 | 14 | - |
| exon-intron | SEC22A | 3 | - | PDIA5 | 3 | - |
| exon-exon | PPP1R32 | 11 | - | SDHAF2 | 11 | - |
| exon-exon | RPL17 | 18 | - | C18orf32 | 18 | - |
| exon-exon | FAAH | 1 | - | NSUN4 | 1 | - |
| exon-exon | MRPL53 | 2 | + | CCDC142 | 2 | + |
| exon-exon | MS4A6E | 11 | + | MS4A14 | 11 | + |
| intron-exon | LOC112577599 | 1 | - | EXO5 | 1 | - |
| exon-exon | SPDYA | 2 | - | PPP1CB | 2 | - |
| exon-exon | MCM9 | 6 | + | FAM184A | 6 | + |
| exon-exon | LOC100652768 | 11 | + | TAGLN | 11 | + |
| intron-exon | PPP1R42 | 8 | + | COPS5 | 8 | + |
| exon-exon | HOXD11 | 2 | + | HOXD10 | 2 | + |
| exon-intron | ZNF664 | 12 | + | ZNF664-RFLNA | 12 | + |
| exon-exon | TMED6 | 16 | - | COG8 | 16 | - |
| exon-intron | VHL | 3 | - | LOC107303339 | 3 | - |
| exon-exon | RAB43 | 3 | + | ISY1 | 3 | + |
| exon-intron | LOC100287896 | 11 | + | POLD3 | 11 | + |
| exon-exon | PM20D2 | 6 | - | PNRC1 | 6 | - |
| intron-exon | RP11-234B24.6 | 12 | + | GALNT8 | 12 | + |
| exon-intron | SNRNP27 | 2 | + | MXD1 | 2 | + |
| intron-exon | LOC112577599 | 1 | - | EXO5 | 1 | - |
| intron-exon | AL645941.2 | 6 | - | HLA-DMB | 6 | - |
| exon-exon | TIA1 | 2 | - | C2orf42 | 2 | - |
| intron-exon | PRR13 | 12 | + | PCBP2 | 12 | + |
| intron-exon | UBE2W | 8 | - | STAU2 | 8 | - |
| exon-exon | TMX2 | 11 | + | CTNND1 | 11 | + |
| exon-exon | RNF185 | 22 | + | LIMK2 | 22 | + |
| exon-exon | NUP98 | 11 | - | CHRNA10 | 11 | - |
| exon-exon | PVR | 19 | + | CEACAM19 | 19 | + |
| exon-intron | CCND1 | 11 | + | LTO1 | 11 | + |
| exon-exon | OARD1 | 6 | - | TSPO2 | 6 | - |
| exon-exon | ARPIN | 15 | - | AP3S2 | 15 | - |
| exon-exon | OTUB1 | 11 | - | COX8A | 11 | - |
| exon-exon | VAMP8 | 2 | + | VAMP5 | 2 | + |
| exon-exon | CTNNBIP1 | 1 | - | CLSTN1 | 1 | - |
| exon-exon | MOB1B | 4 | + | DCK | 4 | + |
| exon-exon | WDR37 | 10 | + | LINC00200 | 10 | + |
| exon-exon | DCK | 4 | - | MOB1B | 4 | - |
| intron-exon | AL358472.2 | 1 | + | RAB13 | 1 | + |
| exon-exon | CCND1 | 11 | + | LTO1 | 11 | + |
| exon-exon | TYSND1 | 10 | - | AIFM2 | 10 | - |
| exon-exon | VAMP8 | 2 | + | VAMP5 | 2 | + |
| exon-exon | NUP98 | 11 | - | CHRNA10 | 11 | - |
| exon-exon | NDUFA9 | 12 | + | GALNT8 | 12 | + |
| exon-exon | LOC100630923 | 7 | + | ORAI2 | 7 | + |
| exon-exon | ATG9A | 2 | - | ABCB6 | 2 | - |
| exon-exon | NCOA4 | 10 | + | MSMB | 10 | + |
| exon-exon | TP53RK | 20 | - | SLC13A3 | 20 | - |
| exon-intron | OARD1 | 6 | + | APOBEC2 | 6 | + |
| exon-exon | IL10RB-DT | 21 | - | IFNAR2 | 21 | - |
| exon-exon | TNFSF12 | 17 | + | TNFSF13 | 17 | + |
| exon-exon | HLA-DMA | 6 | - | HLA-DMB | 6 | - |
| exon-exon | RFT1 | 3 | - | SFMBT1 | 3 | - |
| exon-intron | EXO5 | 1 | + | LOC112577599 | 1 | + |
| exon-exon | SHC1 | 1 | - | PYGO2 | 1 | - |
| exon-intron | EFEMP2 | 11 | - | MUS81 | 11 | - |
| exon-intron | ASL | 7 | + | AC068533.4 | 7 | + |
| exon-exon | NDUFA9 | 12 | + | GALNT8 | 12 | + |
| exon-intron | TTLL5 | 14 | - | FLVCR2 | 14 | - |
| exon-exon | EIF4G2 | 11 | + | LOC112268072 | 11 | + |
| exon-exon | WDR37 | 10 | + | LINC00200 | 10 | + |
| exon-exon | NDUFV2 | 18 | + | ANKRD12 | 18 | + |
| exon-exon | SPDYA | 2 | - | PPP1CB | 2 | - |
| exon-exon | PDIA5 | 3 | + | SEC22A | 3 | + |
| exon-exon | SDHD | 11 | + | BCO2 | 11 | + |
| exon-exon | CRTC2 | 1 | + | SLC39A1 | 1 | + |
| exon-exon | TMX2 | 11 | + | CTNND1 | 11 | + |
| exon-exon | EPHX1 | 1 | - | SRP9 | 1 | - |
| exon-exon | TAX1BP3 | 17 | + | P2RX5 | 17 | + |
| exon-exon | VAMP5 | 2 | - | VAMP8 | 2 | - |
| exon-exon | MRPS5 | 2 | + | ZNF514 | 2 | + |
| exon-exon | AIFM2 | 10 | + | SAR1A | 10 | + |
| exon-exon | TSC22D4 | 7 | - | C7orf61 | 7 | - |
| exon-intron | LOC100630923 | 7 | + | ORAI2 | 7 | + |
| exon-exon | GALNT8 | 12 | - | NDUFA9 | 12 | - |
| exon-intron | FKBP1A | 20 | - | SDCBP2 | 20 | - |
| exon-exon | LOC100630923 | 7 | + | ORAI2 | 7 | + |
| intron-exon | LOC107303339 | 3 | + | VHL | 3 | + |
| exon-exon | IER3IP1 | 18 | - | HDHD2 | 18 | - |
| exon-exon | SIDT2 | 11 | + | TAGLN | 11 | + |
| exon-exon | MS4A1 | 11 | - | MS4A5 | 11 | - |
| exon-exon | CHRNA10 | 11 | + | NUP98 | 11 | + |
| exon-exon | C1orf74 | 1 | + | IRF6 | 1 | + |
| exon-exon | RDH11 | 14 | - | VTI1B | 14 | - |
| exon-exon | MAK | 6 | + | SYCP2L | 6 | + |
| exon-exon | DCK | 4 | - | MOB1B | 4 | - |
| exon-exon | HLA-DMA | 6 | - | HLA-DMB | 6 | - |
| intron-exon | PCSK7 | 11 | - | LOC100652768 | 11 | - |
| exon-intron | SAR1A | 10 | - | AIFM2 | 10 | - |
| exon-exon | TOPORS | 9 | - | DDX58 | 9 | - |
| exon-exon | HOXA10 | 7 | - | HOXA9 | 7 | - |
| exon-exon | MRPS5 | 2 | + | ZNF514 | 2 | + |
| exon-exon | RAB43 | 3 | + | ISY1 | 3 | + |
| exon-intron | TTLL5 | 14 | - | FLVCR2 | 14 | - |
| exon-exon | ZNF577 | 19 | + | ZNF649 | 19 | + |
| exon-exon | ZNF425 | 7 | - | ZNF786 | 7 | - |
| exon-exon | ECD | 10 | - | P4HA1 | 10 | - |
| exon-exon | PLA2G12A | 4 | + | CFI | 4 | + |
| exon-exon | MVP | 16 | - | PAGR1 | 16 | - |
| exon-exon | CNPY3 | 6 | + | CNPY3-GNMT | 6 | + |
| exon-intron | HLA-DMB | 6 | + | AL645941.2 | 6 | + |
| exon-exon | SKP1 | 5 | + | PPP2CA | 5 | + |
| exon-exon | SNX15 | 11 | - | ARL2 | 11 | - |
| exon-exon | ENTPD7 | 10 | + | CUTC | 10 | + |
| exon-exon | PCBP2 | 12 | - | PRR13 | 12 | - |
| intron-exon | PYGO2 | 1 | + | SHC1 | 1 | + |
| exon-exon | AIFM2 | 10 | + | TYSND1 | 10 | + |
| exon-exon | BABAM2 | 2 | - | MRPL33 | 2 | - |
| intron-exon | COQ3 | 6 | + | PNISR | 6 | + |
| exon-intron | SIDT2 | 11 | + | TAGLN | 11 | + |
| exon-exon | CFDP1 | 16 | + | TMEM170A | 16 | + |
| exon-exon | ARID4B | 1 | - | RBM34 | 1 | - |
| exon-exon | BRK1 | 3 | + | VHL | 3 | + |
| exon-exon | TPH1 | 11 | - | SERGEF | 11 | - |
| exon-exon | PCBP2 | 12 | - | PRR13 | 12 | - |
| exon-exon | RRS1 | 8 | + | ADHFE1 | 8 | + |
| exon-exon | CRTC2 | 1 | + | SLC39A1 | 1 | + |
| exon-exon | CLEC4A | 12 | + | ZNF705A | 12 | + |
| exon-exon | C1orf74 | 1 | + | IRF6 | 1 | + |
| exon-exon | WDR37 | 10 | + | LINC00200 | 10 | + |
| intron-exon | LOC105374063 | 3 | - | POPDC2 | 3 | - |
| exon-exon | VAMP8 | 2 | + | VAMP5 | 2 | + |
| exon-exon | PNRC1 | 6 | + | PM20D2 | 6 | + |
| exon-intron | FBXO16 | 8 | - | ZNF395 | 8 | - |
| intron-exon | C1QTNF3-AMACR | 5 | + | C1QTNF3 | 5 | + |
| exon-exon | ENTPD7 | 10 | + | CUTC | 10 | + |
| intron-exon | POLD3 | 11 | + | LOC105369386 | 11 | + |
| exon-exon | ELOA | 1 | - | RPL11 | 1 | - |
| exon-intron | MVP | 16 | - | PAGR1 | 16 | - |
| exon-exon | PLA2G12A | 4 | + | CFI | 4 | + |
| exon-intron | ZC3H10 | 12 | + | ESYT1 | 12 | + |
| exon-exon | ARMCX1 | X | - | ARMCX4 | X | - |
| exon-exon | XPR1 | 1 | + | LOC107985230 | 1 | + |
| exon-exon | MOB1B | 4 | + | DCK | 4 | + |
| exon-exon | TEX264 | 3 | - | RAD54L2 | 3 | - |
| intron-exon | AC104109.3 | 5 | - | SKP1 | 5 | - |
| exon-intron | PLA2G12A | 4 | + | AC126283.2 | 4 | + |
| exon-exon | IL11RA | 9 | - | GALT | 9 | - |
| exon-intron | RAB43 | 3 | + | ISY1 | 3 | + |
| exon-exon | MDP1 | 14 | + | NEDD8 | 14 | + |
| exon-exon | GIMAP5 | 7 | - | GIMAP1 | 7 | - |
| exon-exon | WDR49 | 3 | - | SERPINI2 | 3 | - |
| exon-exon | ARPIN | 15 | - | AP3S2 | 15 | - |
| exon-exon | CYB5R4 | 6 | - | RIPPLY2 | 6 | - |
| exon-exon | RPL17 | 18 | - | C18orf32 | 18 | - |
| exon-exon | TRIM13 | 13 | + | KCNRG | 13 | + |
| exon-exon | CD22 | 19 | - | MAG | 19 | - |
| intron-exon | COX8A | 11 | + | OTUB1 | 11 | + |
| exon-exon | KLHL3 | 5 | - | SPOCK1 | 5 | - |
| exon-exon | GIMAP5 | 7 | - | GIMAP1 | 7 | - |
| exon-exon | LOC112268469 | 4 | - | LIMK2 | 22 | + |
| exon-exon | CFDP1 | 16 | + | TMEM170A | 16 | + |
| exon-exon | SLC13A3 | 20 | + | TP53RK | 20 | + |
| exon-intron | MS4A14 | 11 | - | MS4A7 | 11 | - |
| exon-exon | PCBP2 | 12 | - | PRR13 | 12 | - |
| exon-exon | RABGGTB | 1 | - | ACADM | 1 | - |
| exon-intron | MRPS17 | 7 | + | NIPSNAP2 | 7 | + |
| exon-exon | ATG9A | 2 | - | ABCB6 | 2 | - |
| exon-exon | TINCR | 19 | + | SAFB2 | 19 | + |
| intron-exon | LEFTY3 | 1 | + | EPHX1 | 1 | + |
| exon-intron | MCM9 | 6 | + | FAM184A | 6 | + |
| exon-exon | HYAL2 | 3 | + | TUSC2 | 3 | + |
| exon-exon | DCK | 4 | - | MOB1B | 4 | - |
| exon-exon | IL2RB | 22 | + | C1QTNF6 | 22 | + |
| exon-exon | SNUPN | 15 | - | PTPN9 | 15 | - |
| exon-exon | PPP1R42 | 8 | + | COPS5 | 8 | + |
| exon-exon | UNC5CL | 6 | + | TSPO2 | 6 | + |
| exon-intron | ZNF286A | 17 | + | AC005324.4 | 17 | + |
| exon-exon | ZNF664 | 12 | + | ZNF664-RFLNA | 12 | + |
| exon-exon | CATSPERB | 14 | - | TC2N | 14 | - |
| exon-exon | IFNAR2 | 21 | + | IL10RB | 21 | + |
| exon-exon | MC1R | | + | FOXK1 | 7 | + |
| exon-exon | NME1-NME2 | 17 | - | COX1 | MT | + |
| exon-exon | SLC25A3 | 12 | - | H3-3A | 1 | + |
| exon-intron | MYL12A | 18 | - | COPS3 | 17 | - |
| exon-exon | DYNLRB1 | 20 | - | RPL6P27 | 18 | - |
| exon-exon | TRMT11 | | - | ST20-MTHFS | 15 | - |
| exon-exon | RPL15P3 | 6 | - | RPL15 | 3 | + |
| exon-intron | SPDYE2 | 7 | + | POLR2J3 | 7 | - |
| intron-exon | TBC1D15 | 12 | - | ERCC4 | 16 | + |
| exon-exon | RBM6 | 3 | - | RBM6 | 3 | + |
| exon-exon | RPL13AP5 | 10 | - | RPL13AP5 | 10 | + |
| exon-exon | COX4I1 | 16 | - | TRIM28 | 19 | + |
| exon-exon | RANBP9 | 6 | - | HBB | 11 | - |
| exon-exon | KEAP1 | 19 | + | KEAP1 | 19 | - |
| exon-exon | EIF5 | 14 | - | HSP90AB1 | 6 | + |
| exon-exon | ND5 | MT | - | RPL24 | 3 | - |
| exon-exon | TMEM254 | 10 | - | PNPLA2 | 11 | + |
| exon-intron | HLA-DQB1 | 6 | - | LOC100129620 | | + |
| exon-intron | RRN3P2 | 16 | + | AC009093.10 | | + |
| intron-exon | DIPK1A | 1 | - | RPL19 | 17 | + |
| intron-exon | CHCHD3 | 7 | + | ND2 | MT | + |
| exon-exon | RPS24P8 | 3 | + | ZC3H11A | | + |
| exon-exon | UBA3 | 3 | + | UBA3 | 3 | - |
| exon-intron | TOMM70 | 3 | - | ATXN2L | 16 | + |
| exon-exon | SLC12A2 | 5 | - | PABPC1 | 8 | - |
| exon-intron | MINDY3 | | + | LOC100505549 | 18 | + |
| exon-intron | RNA45SN1 | 21 | - | RNR1 | MT | + |
| exon-exon | ATP6V1G2-DDX39B | 6 | + | ND2 | MT | + |
| intron-exon | ACCS | 11 | - | ATXN7 | 3 | + |
| intron-exon | CLINT1 | 5 | - | ATP8 | MT | + |
| exon-exon | DST | 6 | + | MALAT1 | 11 | - |
| exon-exon | RPS3 | 11 | - | CYTB | MT | + |
| intron-exon | RPL31 | 2 | - | RPL31P35 | | + |
| exon-exon | CCDC174 | 3 | - | ATXN2L | 16 | + |
| intron-exon | BAALC | 8 | - | MORN3 | | - |
| exon-intron | NPM1 | 5 | - | FAM172A | 5 | - |
| exon-exon | ARHGDIB | 12 | + | ARHGDIB | 12 | - |
| exon-exon | UBE2Q2P1 | | - | GOLGA6L5P | | - |
| exon-exon | CNOT2 | 12 | - | CNOT2 | 12 | + |
| exon-exon | SCLT1 | 4 | - | ZNF550 | 19 | - |
| exon-exon | CD74 | 5 | + | S100A4 | 1 | - |
| exon-exon | CTDSPL | 3 | - | ND1 | MT | + |
| exon-exon | CDC42 | 1 | - | GNAQ | 9 | + |
| exon-exon | COX6B1 | 19 | - | EEF1A1P5 | 9 | + |
| exon-exon | COX6B1 | 19 | - | COX6B1 | 19 | + |
| exon-exon | TPT1 | 13 | - | CD38 | 4 | + |
| exon-exon | FLCN | 17 | + | P2RY1 | | - |
| exon-exon | DNMT3A | 2 | + | ATP8 | MT | + |
| exon-intron | SRSF6 | 20 | - | RNR2 | MT | + |
| exon-exon | COX1 | MT | - | EEF1A1P5 | 9 | + |
| exon-exon | NCF4 | | - | NCF4 | 22 | + |
| exon-exon | AHNAK | 11 | + | ATP8 | MT | + |
| exon-intron | COX3 | MT | - | NIBAN3 | 19 | + |
| intron-exon | NUP210L | | - | ARHGDIB | 12 | - |
| exon-intron | ARL6IP5 | 3 | - | ZNF511-PRAP1 | | - |
| exon-intron | RACK1 | 5 | + | LOC105377043 | 3 | + |
| exon-intron | HSP90AB1 | 6 | + | ANKRD17 | 4 | - |
| exon-exon | COX2 | MT | + | ND3 | MT | + |
| exon-exon | ARPC1B | 7 | - | RPL6P27 | 18 | - |
| exon-exon | ANXA5 | 4 | + | COX1 | MT | + |
| exon-exon | HDDC2 | 6 | + | LRRFIP2 | 3 | - |
| exon-exon | TXN | 9 | + | TALDO1 | 11 | + |
| intron-exon | WDFY4 | 10 | + | ARF3 | 12 | - |
| exon-exon | RPS3 | 11 | - | RPL26 | 17 | - |
| exon-exon | RPL31P10 | | + | MPO | 17 | - |
| exon-exon | ACTB | 7 | + | GPX1 | | + |
| exon-exon | SHANK3 | 22 | - | SHANK3 | | + |
| intron-exon | LOC105372064 | 18 | - | ATP8 | MT | + |
| exon-exon | ND2 | MT | - | ANAPC5 | 12 | - |
| intron-exon | LOC105369302 | | - | LOC101927745 | | - |
| intron-exon | TPM3 | 1 | + | U2SURP | 3 | + |
| exon-exon | CANX | 5 | + | CANX | 5 | - |
| exon-intron | RNA45SN3 | 21 | + | ZFYVE21 | | + |
| intron-exon | GNAQ | 9 | + | RNA45SN3 | 21 | + |
| intron-exon | VIPR2 | | - | RNA45SN3 | 21 | - |
| intron-exon | LOC105375236 | | + | RNA45SN2 | 21 | - |
| intron-exon | TP63 | 3 | - | RNA45SN3 | 21 | - |
| exon-intron | RNA45SN1 | 21 | - | AL135926.1 | | + |
| exon-intron | RNA45SN1 | 21 | + | TRHDE | | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN2 | 21 | + | FBN2 | 5 | + |
| intron-exon | LOC112268284 | 21 | - | RNA45SN1 | 21 | + |
| intron-exon | PPARGC1A | 4 | + | RNA45SN1 | 21 | - |
| exon-intron | RNA45SN3 | 21 | - | RNA28SP | 21 | - |
| exon-intron | RNA45SN2 | 21 | - | KCNIP1 | 5 | + |
| intron-exon | ESRRB | | - | RNA45SN3 | 21 | - |
| exon-intron | CDC27P10 | | + | PCGF6 | 10 | - |
| exon-exon | TRERF1 | 6 | - | RNA45SN3 | 21 | + |
| intron-exon | SFXN2 | | + | RNA45SN3 | 21 | + |
| intron-exon | EPHA5 | 4 | + | NACA | 12 | - |
| intron-exon | TENM2 | 5 | + | RNA45SN1 | 21 | + |
| intron-exon | LOC110121494 | | + | RNA45SN1 | 21 | + |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN3 | 21 | - |
| exon-intron | RNA45SN2 | 21 | - | FOXN3 | 14 | + |
| exon-intron | RNA45SN2 | 21 | + | PRTG | | - |
| exon-intron | RNA45SN2 | 21 | - | CAMTA1 | 1 | + |
| exon-intron | RNA45SN3 | 21 | - | DLG2 | 11 | - |
| exon-intron | RNA45SN1 | 21 | + | CAVIN2-AS1 | 2 | - |
| intron-exon | CFAP61 | 20 | + | RNA45SN2 | 21 | + |
| intron-exon | ATP6V0A4 | 7 | - | RNA45SN2 | 21 | + |
| exon-intron | RNA45SN3 | 21 | - | LSAMP | 3 | + |
| exon-intron | RNA45SN1 | 21 | + | WDR7 | 18 | - |
| exon-intron | RNA45SN2 | 21 | - | ESCO1 | 18 | + |
| intron-exon | LOC105370182 | | + | RNA45SN1 | 21 | + |
| intron-exon | CDON | 11 | - | RNA45SN2 | 21 | + |
| intron-exon | PMP22 | 17 | - | RNA45SN1 | 21 | - |
| intron-exon | LOC105375412 | | + | LOC101927995 | | + |
| intron-exon | TSGA10 | 2 | - | LOC105370849 | | - |
| exon-exon | ADRA1A | | + | ADRA1A | | - |
| exon-intron | RNA45SN1 | 21 | - | RNA28SP | 21 | - |
| intron-exon | RNR2 | MT | - | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN3 | 21 | - | RNA45SN3 | 21 | + |
| intron-exon | RNA28SP | 21 | + | RNA45SN3 | 21 | + |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN1 | 21 | + |
| exon-intron | RNA45SN1 | 21 | + | RNA28SP | 21 | - |
| exon-exon | RNA45SN2 | 21 | - | RNA45SN3 | 21 | + |
| intron-exon | RNA28SP | 21 | - | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN3 | 21 | - | NUCB2 | 11 | + |
| intron-exon | RNA28SP | 21 | + | RNA45SN2 | 21 | - |
| intron-exon | RNR2 | MT | + | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN1 | 21 | - | RNA45SN3 | 21 | + |
| exon-intron | RNA45SN1 | 21 | - | RNA28SP | 21 | - |
| intron-exon | RNA18SP5 | 21 | - | RNA45SN3 | 21 | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN1 | 21 | + |
| exon-exon | RNA45SN3 | 21 | + | LOC112268284 | 21 | - |
| intron-exon | LOC100506403 | 21 | - | RNA45SN1 | 21 | + |
| exon-intron | ZNF548 | 19 | - | GSTA1 | 6 | + |
| exon-exon | SH3GL3 | 15 | - | L3MBTL1 | 20 | + |
| exon-exon | EXOSC2 | 9 | + | EXOSC2 | 9 | - |
| exon-exon | LEMD3 | 12 | - | MAPK14 | 6 | + |
| exon-exon | TNFRSF1A | 12 | + | TNFRSF1A | 12 | - |
| exon-exon | DCN | 12 | - | SSR1 | 6 | - |
| exon-exon | TMEM181 | 6 | + | SMARCA2 | 9 | + |
| exon-exon | RPL22 | 1 | + | TP53BP1 | 15 | - |
| exon-exon | CDC42EP4 | 17 | + | EXOC7 | 17 | - |
| exon-exon | PPM1G | 2 | - | GOLGB1 | 3 | - |
| exon-exon | ATXN3 | 14 | - | TPRXL | | + |
| exon-intron | HMGA2 | 12 | + | COG5 | 7 | + |
| exon-exon | P2RY8 | X | - | CRLF2 | | - |
| exon-intron | PUM1 | 1 | - | MIR1323 | 19 | + |
| exon-exon | TRAV14DV4 | 14 | + | TRAJ9 | 14 | + |
| exon-exon | TRAV38-1 | 14 | + | TRAJ41 | 14 | + |
| exon-exon | TRAV19 | 14 | + | TRAJ24 | | + |
| exon-exon | IGHV3-23 | 14 | - | IGHV3-11 | 14 | - |
| exon-intron | LOC105374363 | | + | AC074117.1 | | + |
| exon-intron | NARF | 17 | - | LOC105371941 | | - |
| intron-exon | AFF1 | 4 | + | ATXN3 | 14 | - |
| exon-exon | BACH1 | | + | GRIK1-AS2 | | + |
| exon-exon | LOC107985486 | | - | BACH1 | 21 | - |
| exon-intron | TOP3B | | - | YPEL1 | 22 | - |
| exon-exon | GATD3B | 21 | - | GATD3A | | + |
| exon-exon | IL2RB | 22 | - | MYH9 | 22 | - |
| exon-exon | GATD3A | 21 | - | GATD3B | 21 | + |
| exon-exon | HSPA13 | 21 | + | KDM5C | X | + |
| exon-exon | DESI1 | 22 | - | POLDIP3 | 22 | + |
| intron-exon | CYP2D6 | 22 | - | NDUFA6-DT | 22 | - |
| exon-exon | COMT | 22 | + | LARGE1 | 22 | + |
| exon-intron | IL10RB | 21 | + | CBR1 | 21 | + |
| intron-exon | LOC100133286 | 21 | - | IL10RB | 21 | - |
| exon-intron | AP1B1 | 22 | + | AP1B1 | 22 | - |
| intron-exon | RTCB | 22 | + | ANKRD54 | 22 | + |
| intron-exon | LOC100133286 | 21 | - | IL10RB | 21 | - |
| exon-exon | RTCB | 22 | + | ANKRD54 | 22 | + |
| exon-exon | TMPRSS3 | 21 | - | PIGP | | - |
| exon-exon | MAP3K7CL | 21 | + | ING1 | 13 | + |
| exon-exon | TTLL1 | | - | POLR3H | 22 | - |
| exon-exon | GPX1 | 3 | + | GPX1 | | - |
| exon-intron | GPX1 | 3 | + | CHURC1-FNTB | 14 | + |
| exon-intron | XPNPEP3 | 22 | + | RBX1 | | + |
| exon-exon | SMIM34A | | - | LOC105372793 | | - |
| exon-exon | XPNPEP3 | 22 | + | RBX1 | | + |
| exon-exon | XPNPEP3 | 22 | + | RBX1 | | + |
| exon-exon | GART | 21 | - | TMEM50B | 21 | - |
| exon-exon | PWP2 | | - | TRAPPC10 | 21 | - |
| exon-exon | LOC105372776 | | + | TIAM1 | 21 | + |
| exon-exon | RBX1 | 22 | - | XPNPEP3 | 22 | - |
| exon-exon | LOC102724159 | 21 | + | TRAPPC10 | 21 | - |
| exon-exon | PRR14L | 22 | - | PISD | 22 | - |
| intron-exon | BAIAP2L2 | | - | SLC16A8 | | - |
| exon-intron | PISD | 22 | + | PRR14L | 22 | + |
| exon-exon | CSDC2 | | + | SNU13 | 22 | + |
| intron-exon | AP000275.1 | | + | SYNJ1 | 21 | + |
| exon-exon | SNU13 | 22 | - | CSDC2 | 22 | - |
| intron-exon | AP000275.1 | | + | SYNJ1 | 21 | + |
| exon-exon | TUBG2 | 17 | + | IFNGR2 | 21 | - |
| exon-exon | ADA2 | 22 | + | CECR3 | | + |
| intron-exon | AP000275.1 | | + | SYNJ1 | 21 | + |
| exon-intron | SNU13 | 22 | - | DESI1 | 22 | - |
| exon-intron | SNU13 | 22 | - | CSDC2 | 22 | - |
| exon-exon | DGCR8 | | + | RANBP1 | 22 | + |
| exon-exon | TAB1 | 22 | + | MIEF1 | 22 | + |
| intron-exon | RANBP1 | 22 | - | DGCR8 | 22 | - |
| exon-exon | MIEF1 | 22 | - | TAB1 | | - |
| exon-intron | GUCD1 | 22 | - | ADORA2A-AS1 | | - |
| exon-intron | SIM2 | | + | HLCS | 21 | + |
| exon-exon | SPECC1L | | + | ADORA2A | | + |
| exon-intron | VPS26C | 21 | - | DSCR9 | 21 | - |
| exon-exon | ADSL | 22 | - | TNRC6B | 22 | - |
| intron-exon | IL10RB | 21 | - | IFNAR2 | 21 | - |
| exon-exon | DSCR9 | 21 | + | VPS26C | 21 | + |
| exon-intron | ADA2 | 22 | + | CECR3 | | + |
| intron-exon | PRR14L | 22 | - | PISD | 22 | - |
| intron-exon | PRR14L | 22 | - | PISD | 22 | - |
| exon-exon | ADSL | 22 | - | TNRC6B | 22 | - |
| exon-exon | SCAF4 | 21 | + | IFNAR1 | 21 | + |
| exon-exon | IFNAR1 | 21 | - | SCAF4 | 21 | - |
| intron-exon | SH2D3C | | - | COL6A1 | 21 | + |
| exon-exon | SCAF4 | 21 | + | IFNAR1 | 21 | + |
| exon-exon | SCAF4 | 21 | + | IFNAR1 | 21 | + |
| exon-intron | CSTB | 21 | - | RRP1B | | - |
| exon-exon | IFNAR1 | 21 | - | SCAF4 | 21 | - |
| exon-intron | CSTB | 21 | - | RRP1B | | - |
| exon-exon | COL6A1 | 21 | - | SUMO3 | 21 | - |
| exon-exon | IFNAR1 | 21 | - | SCAF4 | 21 | - |
| intron-exon | SAMSN1-AS1 | | + | LOC388813 | | + |
| exon-exon | GATD3A | 21 | - | PDXK | 21 | - |
| exon-exon | CHODL | 21 | - | C21orf91 | 21 | - |
| exon-exon | GATD3B | 21 | + | PDXK | 21 | - |
| exon-exon | CHODL | 21 | - | C21orf91 | 21 | - |
| exon-exon | MYH9 | 22 | - | HMOX1 | 22 | - |
| exon-exon | TRIOBP | 22 | - | EIF3D | 22 | - |
| exon-exon | EIF3D | 22 | + | TRIOBP | 22 | + |
| exon-exon | MIF-AS1 | 22 | - | SLC2A11 | | - |
| exon-intron | EIF3D | 22 | + | TRIOBP | 22 | + |
| exon-exon | LCA5L | 21 | - | GET1-SH3BGR | 21 | - |
| exon-exon | SUMO3 | 21 | - | UBE2G2 | | - |
| exon-exon | NDUFV3 | | + | PKNOX1 | 21 | + |
| exon-exon | SUMO3 | 21 | - | UBE2G2 | | - |
| exon-exon | TOP3B | | - | PI4KA | 22 | - |
| exon-exon | NDUFV3 | | + | PKNOX1 | 21 | + |
| exon-exon | PI4KA | 22 | + | TOP3B | 22 | + |
| exon-exon | ARVCF | 22 | + | PI4KA | 22 | + |
| exon-exon | ARVCF | 22 | + | PI4KA | 22 | + |
| intron-exon | PRMT2 | 21 | - | COL6A2 | 21 | - |
| exon-exon | ARVCF | 22 | + | PI4KA | 22 | + |
| exon-intron | MORC3 | | - | AP000692.2 | | - |
| exon-exon | ARVCF | 22 | + | PI4KA | 22 | + |
| exon-exon | ARFGAP3 | 22 | + | PACSIN2 | 22 | + |
| exon-exon | NDUFV3 | | + | PKNOX1 | 21 | + |
| exon-exon | MORC3 | | - | DOP1B | 21 | - |
| exon-exon | ARFGAP3 | 22 | + | PACSIN2 | 22 | + |
| exon-exon | PSMD11 | 17 | - | TSPO | | - |
| exon-exon | RUNX1 | 21 | - | CBFA2T2 | 20 | + |
| exon-exon | RUNX1 | 21 | - | NOL4L | 20 | - |
| exon-exon | RUNX1 | 21 | - | NOL4L | 20 | - |
| exon-exon | NOL4L | 20 | - | RUNX1 | 21 | - |
| exon-exon | RUNX1 | 21 | - | CBFA2T2 | 20 | + |
| intron-exon | CHORDC1 | 11 | + | DISC1FP1 | 11 | + |
| exon-exon | ESRP1 | 8 | + | RAF1 | 3 | - |
| exon-exon | SLC45A3 | 1 | - | BRAF | 7 | - |
| exon-exon | KMT2A | 11 | + | BTBD18 | 11 | - |
| exon-exon | IGHV3-30 | 14 | - | IGHV3-11 | 14 | - |
| exon-exon | EML4 | 2 | + | ALK | 2 | - |
| intron-exon | EML4 | 2 | + | ALK | 2 | - |
| exon-intron | CA2 | 8 | + | SLC39A11 | 17 | + |
| exon-exon | TALAM1 | 11 | - | MALAT1 | 11 | - |
| exon-intron | PGC | 6 | - | CUL3 | 2 | + |
| exon-intron | LYZ | 12 | + | EP300 | 22 | - |
| exon-exon | RPL6 | 12 | + | FN1 | 2 | - |
| exon-intron | LIPF | 10 | + | VWC2L | 2 | + |
| intron-exon | KIF6 | 6 | + | HSD17B2 | 16 | + |
| exon-intron | GKN1 | 2 | + | USP34 | 2 | + |
| exon-intron | PRRC2C | 1 | + | FAM184A | 6 | - |
| intron-exon | PSG4 | 19 | - | PSG7 | 19 | - |
| exon-intron | NCOR2 | 12 | - | ZNF664-RFLNA | 12 | - |
| intron-exon | AC226119.1 | 4 | - | LOC100420818 | 4 | - |
| intron-exon | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | + | LOC101929240 | 17 | + |
| exon-exon | COX6C | 8 | + | FURIN | 15 | - |
| exon-exon | WDR34 | 9 | - | PRRT3-AS1 | 3 | + |
| exon-exon | CLCN3 | 4 | + | SMNDC1 | 10 | - |
| intron-exon | SYT1 | 12 | + | DDA1 | | + |
| intron-exon | RP11-649A16.1 | 3 | - | LOC112268449 | 3 | - |
| exon-exon | LTBP3 | 11 | - | SCYL1 | 11 | - |
| intron-exon | IGFBP7 | 4 | - | POLR2B | 4 | - |
| intron-exon | CFLAR-AS1 | 2 | - | CFLAR | 2 | - |
| intron-exon | NSL1 | | - | NAA50 | 3 | + |
| intron-exon | DPP10 | 2 | + | SPAST | 2 | + |
| exon-exon | HCFC1 | X | - | VGLL1 | X | + |
| exon-exon | PUM1 | 1 | - | ATP5F1C | 10 | + |
| exon-exon | IRF2BP2 | 1 | - | IRF2BP2 | 1 | + |
| intron-exon | FAM86B2 | | + | LOC100506990 | 8 | + |
| exon-exon | ZNF155 | | + | ZNF230 | | + |
| intron-exon | SPAG17 | 1 | - | WDR3 | 1 | + |
| exon-exon | CUTA | 6 | + | RPS23 | 5 | - |
| intron-exon | PRKN | 6 | - | WASF1 | 6 | - |
| exon-exon | MED1 | 17 | - | HPCAL4 | 1 | - |
| exon-exon | PAIP2B | 2 | - | YEATS2 | 3 | + |
| exon-exon | USO1 | 4 | - | SECISBP2L | 15 | + |
| exon-exon | NR2F6 | 19 | + | NR2F6 | 19 | - |
| exon-exon | CD74 | 5 | + | CD74 | 5 | - |
| exon-exon | RPS4X | X | + | LOC107985139 | 18 | + |
| exon-intron | ZNF667 | 19 | + | FLCN | 17 | - |
| intron-exon | MICAL3 | 22 | + | LOC105378179 | 14 | + |
| exon-exon | CELF5 | | + | CELF5 | 19 | - |
| exon-intron | CELF5 | | + | CELF5 | 19 | - |
| exon-exon | CTSO | 4 | + | CTSO | 4 | - |
| exon-exon | IGLC2 | 22 | + | IGLC6 | | + |
| intron-exon | TYW1 | 7 | + | PMS2P4 | 7 | + |
| exon-exon | ADAM15 | 1 | + | MRPL36 | 5 | - |
| exon-exon | SUPT6H | 17 | + | IGHA2 | 14 | - |
| exon-exon | RNA45SN2 | 21 | + | IL17RA | 22 | + |
| exon-exon | CCDC88B | | + | GATD1 | | - |
| exon-exon | C20orf27 | 20 | + | FZD7 | 2 | + |
| intron-exon | IGH | 14 | - | IGHA1 | 14 | - |
| intron-exon | TIMELESS | 12 | - | RPS15P4 | 2 | - |
| exon-exon | ECHS1 | 10 | + | ECHS1 | 10 | - |
| exon-exon | DNAJC4 | 11 | - | DNAJC4 | 11 | + |
| exon-intron | YARS2 | 12 | - | EIF2AK2 | 2 | + |
| exon-intron | HBG2 | 11 | + | LOC106099065 | 11 | + |
| exon-intron | ZNF667 | 19 | + | FLCN | 17 | - |
| exon-exon | CD74 | 5 | + | CD74 | 5 | - |
| exon-exon | NCL | 2 | + | NCL | 2 | - |
| exon-intron | NEU3 | | + | SH3KBP1 | X | - |
| exon-exon | DDB1 | 11 | - | FOXP1 | 3 | - |
| exon-intron | NEFL | 8 | + | TVP23C-CDRT4 | 17 | + |
| exon-intron | YARS2 | 12 | - | BICD1 | 12 | - |
| exon-intron | ERAL1 | 17 | - | ZNF610 | 19 | - |
| exon-exon | INS-IGF2 | 11 | + | HNRNPA1 | 12 | - |
| exon-exon | NXT1 | | - | NXT1 | | + |
| exon-intron | DLAT | 11 | - | SPTB | 14 | - |
| intron-exon | SPTB | 14 | + | DLAT | 11 | + |
| exon-exon | HHIP | 4 | - | HHIP | 4 | + |
| exon-exon | YPEL4 | 11 | - | FBXL16 | 16 | - |
| exon-exon | CLU | 8 | + | CLU | 8 | - |
| intron-exon | PSMD11 | 17 | + | GINM1 | | + |
| intron-exon | RNA28SP | 21 | + | CALM3 | 19 | + |
| intron-exon | HTT | 4 | + | LRPAP1 | 4 | + |
| exon-intron | ZFP14 | 19 | - | GNB1 | 1 | - |
| exon-intron | CHD2 | 15 | + | TENM2 | 5 | + |
| exon-exon | SAMD10 | 20 | + | SERBP1P5 | | - |
| intron-exon | MAGI3 | 1 | - | RPL23AP42 | 3 | - |
| intron-exon | AL024495.1 | | - | LINC02885 | 22 | - |
| exon-intron | RN7SK | 6 | + | 7SK | | - |
| exon-exon | FYCO1 | 3 | - | SAT1 | X | + |
| exon-exon | TNS1 | 2 | - | LOC105369519 | | + |
| exon-exon | CHD4 | 12 | + | BGN | X | + |
| exon-exon | TALAM1 | 11 | - | HBA2 | 16 | + |
| intron-exon | BX664727.3 | | + | MEG3 | 14 | + |
| intron-exon | PRKAA2 | 1 | + | SLC25A37 | 8 | + |
| exon-exon | SKIL | | - | INSIG1 | 7 | + |
| exon-intron | HBG1 | 11 | + | LOC106099065 | 11 | + |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| intron-exon | NUP93 | 16 | + | FABP1 | 2 | - |
| exon-intron | HBG1 | 11 | + | LOC106099064 | | + |
| exon-exon | INS-IGF2 | 11 | + | PYCR2 | | + |
| exon-exon | COX10-AS1 | 17 | + | LOC100506974 | | + |
| exon-intron | LOC105376078 | | + | PDCD6IP | 3 | - |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-exon | AGT | | + | RPS12 | 6 | + |
| exon-intron | LTA4H | 12 | + | LOC101927237 | | - |
| exon-exon | SRRM1 | 1 | - | SRRM1 | 1 | + |
| exon-intron | SLC4A1 | 17 | - | ATPAF2 | 17 | - |
| intron-exon | ATG7 | 3 | + | SKAP2 | 7 | - |
| intron-exon | NT5C3A | | + | PCYT1A | 3 | - |
| exon-exon | INS-IGF2 | 11 | - | TULP3 | 12 | + |
| intron-exon | TLCD1 | 17 | + | NEK8 | 17 | + |
| exon-intron | HBG1 | 11 | + | LOC106099064 | | + |
| intron-exon | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | + | LOC101929240 | 17 | + |
| intron-exon | MMAA | | + | TRIM74 | 7 | + |
| intron-exon | LINC00174 | 7 | - | HBG1 | 11 | - |
| exon-exon | VAT1 | 17 | + | MAVS | 20 | - |
| exon-exon | MYO10 | 5 | - | SETX | 9 | - |
| exon-exon | GAS5 | 1 | - | CENPL | 1 | - |
| intron-exon | GUSBP2 | 6 | - | WIZ | 19 | - |
| exon-exon | FAXC | 6 | + | FAXC | 6 | - |
| exon-exon | ZNF148 | 3 | + | ZNF148 | 3 | - |
| intron-exon | ZC3H11A | 1 | + | ALPP | 2 | + |
| exon-exon | DYNC1H1 | 14 | + | ZMYND8 | 20 | - |
| exon-intron | HNF4A-AS1 | 20 | - | HNF4A | 20 | - |
| exon-exon | UBE2Z | 17 | - | UBE2Z | 17 | + |
| intron-exon | LOC107986665 | 6 | + | LOC105378093 | 6 | + |
| intron-exon | CACNB2 | 10 | + | PCSK1N | | - |
| exon-exon | CGB8 | 19 | - | CGB3 | | - |
| exon-exon | RD3 | 1 | + | RD3 | 1 | - |
| exon-exon | RD3 | 1 | + | RD3 | 1 | - |
| intron-exon | SNAP25 | 20 | - | SNAP25-AS1 | 20 | - |
| exon-exon | CGB8 | 19 | - | CGB3 | | - |
| exon-exon | LGR4 | 11 | + | TRIM58 | 1 | + |
| exon-exon | TBC1D8 | 2 | - | CAMTA1 | 1 | + |
| exon-intron | GNG5 | 1 | + | LINC01237 | | - |
| exon-intron | KIAA2026 | 9 | - | RHBDL2 | | - |
| intron-exon | LOC105370032 | | - | SASH1 | 6 | - |
| exon-exon | EML4 | 2 | + | ALK | 2 | - |
| exon-exon | EML4 | 2 | + | ALK | 2 | - |
| exon-exon | EML4 | 2 | + | ALK | 2 | - |
| exon-exon | TNFRSF13B | 17 | - | IGHG1 | 14 | - |
| exon-intron | MTAP | 9 | + | RP11-145E5.5 | 9 | + |
| exon-intron | MTAP | 9 | + | RP11-145E5.5 | 9 | + |
| intron-exon | CSNK2B | 6 | + | LY6G5B | 6 | + |
| intron-exon | CSNK2B | 6 | + | LY6G5B | 6 | + |
| exon-exon | CSNK2B | 6 | + | LY6G5B | 6 | + |
| intron-exon | CSNK2B | 6 | + | LY6G5B | 6 | + |
| exon-exon | IGHJ2 | 14 | - | IGHA1 | 14 | - |
| exon-exon | IGLV2-8 | 22 | + | IGLL5 | 22 | + |
| exon-exon | LOC284912 | 22 | - | MB | 22 | - |
| exon-exon | MPRIP | 17 | + | NTRK1 | 1 | + |
| exon-exon | CD74 | 5 | - | NTRK1 | 1 | + |
| intron-exon | GPC1 | 2 | + | ARL8A | 1 | - |
| exon-intron | FCAR | 19 | + | TRA2A | 7 | - |
| intron-exon | STRN | 2 | - | TGFBR2 | 3 | + |
| intron-exon | PTK7 | 6 | + | MRPL14 | 6 | - |
| exon-exon | LOC105372465 | 19 | + | RFPL4A | 19 | + |
| exon-exon | LOC441098 | 5 | + | LOC105379100 | 5 | + |
| intron-exon | AC093627.3 | 7 | + | FAM20C | 7 | + |
| intron-exon | MNX1 | 7 | + | MNX1-AS1 | 7 | + |
| exon-intron | ARL2BPP3 | 13 | + | RFXAP | 13 | + |
| exon-intron | LOC112268140 | 14 | + | RPL31P5 | 14 | + |
| intron-exon | TVP23BP1 | 15 | + | GABRG3 | 15 | + |
| intron-exon | LOC110120861 | 15 | - | TLE3 | 15 | - |
| exon-exon | LOC105372579 | 20 | - | ENTPD6 | 20 | - |
| exon-intron | LOC107985400 | 20 | + | LOC105372582 | 20 | + |
| exon-intron | LOC101232810 | 22 | - | KIAA1671 | 22 | - |
| exon-exon | LOC107985661 | X | + | PLP1 | X | + |
| exon-intron | SLC25A34 | 1 | + | SLC25A34-AS1 | 1 | + |
| intron-exon | DEGS1 | 1 | - | LOC724084 | 1 | - |
| intron-exon | OR2L13 | 1 | - | CLK3P2 | 1 | - |
| exon-intron | ANKRD36B | 2 | - | AC159540.2 | 2 | - |
| exon-exon | LOC107985931 | 2 | - | RGPD3 | 2 | - |
| exon-intron | RPP14 | 3 | + | AC098479.1 | 3 | + |
| exon-exon | CCNL1 | 3 | + | LOC101928236 | 3 | + |
| exon-exon | HTRA3 | 4 | + | LOC112268463 | 4 | + |
| exon-exon | LOC105374556 | 4 | - | LOC107986268 | 4 | - |
| exon-exon | LOC105374556 | 4 | - | LOC107986268 | 4 | - |
| exon-intron | LOC105377387 | 4 | + | LOC105377388 | 4 | + |
| intron-exon | GRIA2 | 4 | - | LOC391707 | 4 | - |
| exon-exon | NAIP | 5 | + | GTF2H2 | 5 | + |
| intron-exon | THBS4 | 5 | - | MTX3 | 5 | - |
| exon-intron | LOC107986369 | 5 | - | AC106791.3 | 5 | - |
| exon-intron | LOC101928005 | 5 | - | AC106791.1 | 5 | - |
| exon-intron | PPP1R11 | 6 | + | RNF39 | 6 | + |
| exon-intron | PPP1R11 | 6 | + | RNF39 | 6 | + |
| exon-exon | ABCF1 | 6 | + | PPP1R10 | 6 | + |
| exon-exon | ABCF1 | 6 | + | PPP1R10 | 6 | + |
| exon-intron | FLOT1 | 6 | - | TUBB | 6 | - |
| exon-intron | HCP5 | 6 | - | HLA-X | 6 | - |
| exon-exon | LOC105375019 | 6 | - | LY6G5C | 6 | - |
| exon-intron | HSPA1L | 6 | - | LSM2 | 6 | - |
| exon-exon | SLC44A4 | 6 | - | NEU1 | 6 | - |
| exon-intron | ZBTB12 | 6 | - | C2 | 6 | - |
| exon-exon | ATF6B | 6 | - | TNXB | 6 | - |
| exon-exon | LOC101928096 | 6 | + | CENPW | 6 | + |
| intron-exon | AL356534.1 | 6 | + | LOC105377991 | 6 | + |
| intron-exon | AL023584.1 | 6 | + | HIVEP2 | 6 | + |
| exon-intron | LOC105378073 | 6 | - | AL512658.1 | 6 | - |
| exon-intron | GPR141 | 7 | + | EPDR1 | 7 | + |
| intron-exon | EPDR1 | 7 | + | NME8 | 7 | + |
| intron-exon | AC105052.1 | 7 | - | RASA4 | 7 | - |
| exon-exon | POLR2J2 | 7 | - | RASA4 | 7 | - |
| exon-intron | TRBV8-2 | 7 | + | TRB | 7 | + |
| exon-intron | TRBV9 | 7 | + | TRB | 7 | + |
| exon-intron | TRBV11-2 | 7 | + | TRB | 7 | + |
| exon-exon | TMEM139 | 7 | - | LOC105375544 | 7 | - |
| exon-intron | ZYX | 7 | + | EPHA1 | 7 | + |
| exon-intron | LOC105379364 | 8 | + | AF279873.3 | 8 | + |
| exon-exon | LOC101929709 | 8 | - | LOC112268015 | 8 | - |
| exon-exon | ANKRD18B | 9 | + | CTSV | 9 | - |
| exon-exon | NIPSNAP3B | 9 | + | ABCA1 | 9 | + |
| intron-exon | SLC31A1 | 9 | - | FKBP15 | 9 | - |
| exon-intron | SLC31A1 | 9 | + | CDC26 | 9 | + |
| exon-intron | SLC31A1 | 9 | + | CDC26 | 9 | + |
| exon-intron | ASCC1 | 10 | + | ANAPC16 | 10 | + |
| exon-intron | MRPS16 | 10 | - | DNAJC9-AS1 | 10 | - |
| intron-exon | OR7E11P | 11 | + | ALG1L8P | 11 | + |
| intron-exon | ENPP7P7 | 11 | - | FAM86C2P | 11 | - |
| exon-exon | LINC02754 | 11 | + | SNRPCP12 | 11 | + |
| exon-intron | SLC48A1 | 12 | + | HDAC7 | 12 | + |
| intron-exon | HDAC7 | 12 | + | LINC02354 | 12 | + |
| exon-intron | LOC100287653 | 12 | + | HSPB8 | 12 | + |
| intron-exon | AC084880.2 | 12 | - | LOC105370025 | 12 | - |
| exon-intron | ZNF664 | 12 | + | ZNF664-RFLNA | 12 | + |
| intron-exon | LINC02825 | 12 | + | LINC02350 | 12 | + |
| exon-intron | LINC00345 | 13 | + | MRPS31P4 | 13 | + |
| intron-exon | AL353633.1 | 13 | + | LOC105370281 | 13 | + |
| intron-exon | AL353633.1 | 13 | + | LOC105370281 | 13 | + |
| exon-exon | TOX4 | 14 | + | METTL3 | 14 | + |
| intron-exon | TRA | 14 | + | TRAC | 14 | + |
| intron-exon | TRAV8-6 | 14 | + | TRAJ57 | 14 | + |
| exon-intron | TRAV21 | 14 | + | TRA | 14 | + |
| intron-exon | TRAV21 | 14 | + | TRAJ53 | 14 | + |
| exon-intron | TRAV22 | 14 | + | TRA | 14 | + |
| intron-exon | TRAV23DV6 | 14 | + | TRAJ52 | 14 | + |
| exon-exon | TRAV23DV6 | 14 | + | TRAJ36 | 14 | + |
| intron-exon | TRAV25 | 14 | + | TRAJ38 | 14 | + |
| exon-exon | TRAV26-1 | 14 | + | TRAJ6 | 14 | + |
| exon-intron | TRAV29DV5 | 14 | + | TRA | 14 | + |
| exon-intron | TRAV41 | 14 | + | TRA | 14 | + |
| intron-exon | TRA | 14 | + | TRAC | 14 | + |
| intron-exon | TRA | 14 | + | TRAC | 14 | + |
| intron-exon | TRA | 14 | + | TRAC | 14 | + |
| exon-intron | LOC105370420 | 14 | + | LOC728755 | 14 | + |
| intron-exon | HEATR5A | 14 | + | LOC101927124 | 14 | + |
| exon-intron | LOC105370532 | 14 | + | SGPP1 | 14 | + |
| intron-exon | LOC107987223 | 15 | - | C15orf48 | 15 | - |
| exon-intron | LOC105376714 | 15 | + | SLC30A4 | 15 | + |
| exon-intron | LOC105376714 | 15 | + | HMGN2P46 | 15 | + |
| intron-exon | LOC105379460 | 16 | + | LOC102723728 | 16 | + |
| intron-exon | AC007610.2 | 16 | - | HEATR3 | 16 | - |
| exon-intron | LOC101928682 | 16 | - | RPL39P30 | 16 | - |
| exon-intron | NKIRAS2 | 17 | + | ZNF385C | 17 | + |
| exon-intron | C17orf113 | 17 | - | ZNF385C | 17 | - |
| exon-intron | COASY | 17 | - | HSD17B1 | 17 | - |
| exon-intron | MLX | 17 | + | PSMC3IP | 17 | + |
| exon-exon | MLX | 17 | + | PSMC3IP | 17 | + |
| exon-intron | UBE2Z | 17 | + | SNF8 | 17 | + |
| exon-intron | UBE2Z | 17 | + | SNF8 | 17 | + |
| exon-intron | UBE2Z | 17 | + | SNF8 | 17 | + |
| exon-intron | LINC01483 | 17 | + | LINC01497 | 17 | + |
| exon-exon | NFIX | 19 | + | LYL1 | 19 | + |
| exon-exon | NFIX | 19 | + | LYL1 | 19 | + |
| exon-exon | LINC01801 | 19 | - | ZNF599 | 19 | - |
| exon-exon | LOC105372465 | 19 | + | RFPL4A | 19 | + |
| exon-intron | RFPL4AL1 | 19 | + | RFPL4AP1 | 19 | + |
| exon-intron | LOC101929937 | 20 | - | NRSN2-AS1 | 20 | - |
| exon-intron | LOC101929937 | 20 | - | NRSN2-AS1 | 20 | - |
| exon-exon | LOC101929937 | 20 | + | NRSN2 | 20 | + |
| intron-exon | FAM182A | 20 | + | LOC100134868 | 20 | + |
| exon-exon | LOC100134868 | 20 | + | FAM182A | 20 | + |
| exon-intron | IGLV8-61 | 22 | + | IGL | 22 | + |
| exon-intron | IGLV8-61 | 22 | + | IGL | 22 | + |
| intron-exon | IGL | 22 | + | IGLL5 | 22 | + |
| exon-intron | IGLV10-54 | 22 | + | IGL | 22 | + |
| exon-intron | IGLV10-54 | 22 | + | IGL | 22 | + |
| exon-intron | IGLV10-54 | 22 | + | IGL | 22 | + |
| exon-intron | BMS1P20 | 22 | + | IGL | 22 | + |
| exon-intron | BMS1P20 | 22 | + | IGL | 22 | + |
| exon-exon | BMS1P20 | 22 | + | IGLL5 | 22 | + |
| exon-intron | BMS1P20 | 22 | + | IGL | 22 | + |
| exon-intron | BMS1P20 | 22 | + | IGL | 22 | + |
| exon-intron | IGLV1-47 | 22 | + | IGL | 22 | + |
| exon-exon | IGLV1-47 | 22 | + | IGLL5 | 22 | + |
| exon-intron | IGLV1-47 | 22 | + | IGL | 22 | + |
| exon-intron | IGLV1-47 | 22 | + | IGL | 22 | + |
| exon-intron | IGLC2 | 22 | + | IGL | 22 | + |
| exon-intron | IGLV7-46 | 22 | + | IGL | 22 | + |
| exon-intron | IGLV5-45 | 22 | + | IGL | 22 | + |
| exon-intron | IGLV5-45 | 22 | + | IGL | 22 | + |
| exon-exon | IGLV5-45 | 22 | + | IGLL5 | 22 | + |
| exon-exon | IGLV1-44 | 22 | + | IGLL5 | 22 | + |
| exon-intron | IGLV1-44 | 22 | + | IGL | 22 | + |
| intron-exon | IGL | 22 | + | IGLC2 | 22 | + |
| exon-intron | IGLV7-43 | 22 | + | IGL | 22 | + |
| exon-intron | IGLV1-40 | 22 | + | IGL | 22 | + |
| exon-intron | IGLV1-40 | 22 | + | IGL | 22 | + |
| exon-exon | IGLV1-40 | 22 | + | IGLL5 | 22 | + |
| exon-intron | IGLV1-40 | 22 | + | IGL | 22 | + |
| exon-intron | IGLV1-36 | 22 | + | IGL | 22 | + |
| exon-exon | IGLV1-36 | 22 | + | IGLL5 | 22 | + |
| exon-intron | IGLV1-36 | 22 | + | IGL | 22 | + |
| intron-exon | AL022332.2 | 22 | - | LOC105372969 | 22 | - |
| exon-exon | SEPTIN3 | 22 | + | WBP2NL | 22 | + |
| exon-intron | ARFGAP3 | 22 | + | PACSIN2 | 22 | + |
| intron-exon | AL031584.3 | X | - | LOC100128442 | X | - |
| exon-exon | MTUS1 | 8 | + | OASL | 12 | - |
| exon-exon | LOC284685 | 1 | - | FLI1 | 11 | + |
| exon-exon | ASPSCR1 | 17 | + | TFE3 | X | - |
| exon-exon | GOLGA5 | 14 | + | RET | 10 | + |
| exon-intron | LOC100506403 | 21 | - | NLRP4 | 19 | - |
| intron-exon | ART3 | 4 | - | NAAA | 4 | - |
| exon-exon | AGTRAP | 1 | + | BRAF | 7 | - |
| exon-exon | IGHV2-70 | | - | IGHV4-39 | 14 | - |
| exon-exon | IGHV4-61 | 14 | - | IGHV3-23 | 14 | - |
| exon-intron | EP300 | 22 | + | BCKDHB | 6 | - |
| exon-intron | TRBV25-1 | | + | TRB | 7 | + |
| exon-exon | NBAS | 2 | - | LINC00276 | | - |
| exon-exon | NBAS | 2 | - | CYRIA | 2 | - |
| exon-exon | KLK2 | 19 | + | ETV1 | 7 | - |
| exon-exon | TMPRSS2 | 21 | - | FKBP5 | 6 | - |
| exon-exon | TMPRSS2 | 21 | - | FKBP5 | 6 | - |
| exon-exon | FKBP5 | 6 | - | TMPRSS2 | 21 | - |
| exon-exon | TNPO1 | 5 | + | IKBKB | 8 | + |
| exon-exon | CDKN1A | 6 | + | CD9 | 12 | + |
| exon-exon | ALG5 | 13 | - | PIGU | 20 | - |
| exon-exon | PIGU | 20 | - | ALG5 | 13 | - |
| exon-exon | MIER2 | 19 | - | RSRC2 | 12 | - |
| exon-exon | BCOR | X | - | RARA | 17 | + |
| exon-intron | IGHV3-33 | 14 | - | IGH | 14 | - |
| exon-intron | IGHV3-30 | 14 | - | IGH | 14 | - |
| exon-intron | DAPL1 | 2 | + | OR7E28P | | + |
| exon-intron | DAPL1 | 2 | + | OR7E28P | | + |
| exon-exon | NUP98 | 11 | - | RARG | 12 | - |
| exon-exon | MYH9 | 22 | - | USP6 | 17 | + |
| exon-exon | BCR | 22 | + | RALGPS1 | 9 | + |
| exon-intron | TNK1 | 17 | + | TMEM256-PLSCR3 | 17 | - |
| exon-exon | PAX7 | 1 | + | FOXO1 | 13 | - |
| exon-exon | DCTN1 | 2 | - | ALK | 2 | - |
| intron-exon | MECOM | 3 | - | IGHG1 | 14 | + |
| exon-intron | ING4 | 12 | - | ACRBP | 12 | - |
| intron-exon | LY9 | 1 | + | RRN3P3 | 16 | - |
| intron-exon | SVIL-AS1 | 10 | + | CBFA2T2 | 20 | + |
| exon-exon | KIF5B | 10 | - | RET | 10 | + |
| exon-exon | KIF5B | 10 | - | RET | 10 | + |
| exon-exon | KIF5B | 10 | - | RET | 10 | + |
| exon-exon | SLC34A2 | 4 | + | ROS1 | 6 | - |
| exon-exon | EWSR1 | 22 | + | ETV4 | 17 | - |
| exon-exon | PSMB2 | 1 | - | TFAP2E-AS1 | 1 | - |
| exon-exon | COMT | 22 | + | UMPS | 3 | + |
| exon-exon | TREM1 | 6 | - | TREML3P | 6 | - |
| exon-intron | MAMDC2 | 9 | - | MAMDC2-AS1 | 9 | - |
| exon-intron | TIMP3 | 22 | + | KNTC1 | 12 | - |
| exon-exon | COX10 | 17 | + | RPS8 | 1 | + |
| exon-intron | NEAT1 | 11 | + | LINC01581 | 15 | + |
| exon-intron | COG8 | 16 | - | VPS4A | 16 | - |
| exon-exon | PDHX | 11 | + | ANKHD1-EIF4EBP3 | 5 | + |
| exon-intron | TSSK6 | 19 | - | PDE12 | 3 | + |
| exon-exon | PPIP5K1 | 15 | - | HMGB1 | 13 | - |
| exon-exon | SLC25A37 | 8 | + | GLYR1 | 16 | - |
| exon-exon | YBEY | 21 | - | MCM3AP | 21 | - |
| intron-exon | AC009403.2 | 7 | - | CNPY1 | 7 | - |
| exon-exon | PXN | 12 | - | RNA45SN2 | 21 | + |
| exon-intron | LOC105377261 | 4 | + | RP11-25H12.1 | 4 | + |
| exon-exon | WDR97 | 8 | - | SHARPIN | 8 | - |
| exon-exon | ACBD3 | 1 | - | FOXK1 | 7 | - |
| exon-intron | TMEM210 | 9 | + | ANAPC2 | 9 | + |
| exon-exon | ABCE1 | 4 | + | SMARCA5 | 4 | + |
| exon-intron | SPATA18 | 4 | - | SGCB | 4 | - |
| exon-exon | PCDHB2 | 5 | - | LOC101926905 | 5 | - |
| intron-exon | DPM2 | 9 | - | PIP5KL1 | 9 | - |
| exon-exon | CCDC89 | 11 | - | STIM1 | 11 | + |
| intron-exon | PTPA | 9 | - | CRAT | 9 | - |
| intron-exon | LOC105378913 | 1 | - | PKMP1 | 1 | - |
| intron-exon | AC002074.1 | 7 | + | COL1A2 | 7 | + |
| exon-intron | PSAP | 10 | - | SNRNP27 | 2 | + |
| exon-exon | WDR26 | 1 | + | CNIH3 | 1 | + |
| intron-exon | PARGP1 | 10 | - | AGAP4 | 10 | - |
| exon-intron | BCL2L12P1 | 3 | + | CPNE4 | 3 | + |
| exon-exon | SPINT2 | 19 | + | CHID1 | 11 | + |
| intron-exon | MCM3AP-AS1 | 21 | - | LSS | 21 | - |
| exon-exon | LOC101927974 | 7 | + | CBLL1 | 7 | + |
| exon-intron | ELL2 | 5 | + | LOC101929710 | 5 | + |
| intron-exon | LOC105373017 | 22 | + | HMGXB4 | 22 | + |
| intron-exon | IGH | 14 | - | IGHV3-7 | 14 | - |
| exon-exon | EXD1 | 15 | + | CHP1 | 15 | + |
| exon-exon | EEF1A1 | 6 | - | HLA-B | 6 | + |
| exon-exon | LOC105373836 | 2 | - | FAM126B | 2 | - |
| exon-exon | LOC107985470 | 1 | + | SERINC2 | 1 | + |
| exon-intron | PABPC4L | 4 | + | AC015631.1 | 4 | + |
| exon-exon | CRLS1 | 20 | - | MCM8-AS1 | 20 | - |
| intron-exon | UBE2E2-AS1 | 3 | + | UBE2E2 | 3 | + |
| exon-exon | LCORL | 4 | - | CPEB2 | 4 | + |
| intron-exon | ZNF124 | 1 | - | NEK10 | 3 | - |
| exon-exon | LOC105376240 | 9 | + | TRIM32 | 9 | + |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| intron-exon | LOC101929285 | 6 | - | GTF3C1 | 16 | - |
| intron-exon | RFX3 | 9 | + | RFX3-AS1 | 9 | + |
| intron-exon | RSBN1 | 1 | + | AP4B1-AS1 | 1 | + |
| exon-intron | LOC112268250 | 19 | - | AC011451.3 | 19 | - |
| exon-exon | RNA45SN2 | 21 | + | NDFIP1 | 5 | + |
| intron-exon | SON | 21 | - | GART | 21 | - |
| intron-exon | AC073270.2 | 7 | + | LOC105375321 | 7 | + |
| exon-exon | KLHL17 | 1 | - | MTDH | 8 | + |
| intron-exon | FAM182B | 20 | - | LOC101926935 | 20 | - |
| intron-exon | OCLN | 5 | - | MARVELD2 | 5 | - |
| exon-exon | CT62 | 15 | - | LOC105370886 | 15 | - |
| exon-exon | LOC101927890 | 7 | + | GPNMB | 7 | + |
| intron-exon | MAF1 | 8 | - | SHARPIN | 8 | - |
| exon-exon | LOC105375120 | 7 | + | GPER1 | 7 | + |
| exon-exon | LOC105371371 | 16 | + | OSGIN1 | 16 | + |
| exon-intron | RPL18P8 | 11 | - | AC021723.2 | 11 | - |
| exon-exon | TMSB10 | 2 | + | FAM117A | 17 | + |
| exon-exon | ANAPC11 | 17 | + | NPB | 17 | + |
| exon-intron | LINC01107 | 2 | + | LINC01937 | 2 | + |
| exon-exon | MRPL45 | 17 | + | BRI3BP | 12 | + |
| exon-exon | LOC107985411 | 20 | - | LINC00658 | 20 | - |
| intron-exon | VWA8 | 13 | + | VWA8-AS1 | 13 | + |
| exon-exon | ATP5IF1 | 1 | - | DNAJC8 | 1 | - |
| exon-intron | LOC107985841 | 2 | - | LOC105373397 | 2 | - |
| exon-exon | SPEM2 | 17 | + | FGF11 | 17 | + |
| intron-exon | AC004522.4 | 7 | - | AZGP1 | 7 | - |
| exon-exon | PPP1R7 | 2 | - | PASK | 2 | - |
| exon-intron | ERCC4 | 16 | - | LOC105371093 | 16 | - |
| exon-exon | SRRM2 | 16 | - | SRRM2-AS1 | 16 | - |
| exon-intron | WBP2NL | 22 | - | SEPTIN3 | 22 | - |
| intron-exon | KRT80 | 12 | + | LINC00592 | 12 | + |
| intron-exon | RSPH14 | 22 | + | GNAZ | 22 | + |
| intron-exon | UBE2E2-AS1 | 3 | + | UBE2E2 | 3 | + |
| exon-exon | CARNMT1-AS1 | 9 | - | C9orf40 | 9 | - |
| exon-exon | LACTB2 | 8 | + | XKR9 | 8 | + |
| exon-exon | SLC4A8 | 12 | + | CUL4A | 13 | + |
| intron-exon | LOC105374705 | 5 | - | ESD | 13 | - |
| intron-exon | ULK4P2 | 15 | - | DNM1P50 | 15 | - |
| exon-exon | SMIM26 | 20 | + | EGFL7 | 9 | + |
| exon-exon | ZBBX | 3 | - | SMAP2 | 1 | + |
| exon-exon | NDUFA2 | 5 | + | IK | 5 | + |
| exon-intron | SLC35F5 | 2 | - | RNU6-744P | 2 | - |
| exon-exon | LOC105373961 | 2 | - | PER2 | 2 | - |
| exon-exon | OAT | 10 | - | GALNTL5 | 7 | + |
| intron-exon | LOC107987122 | 9 | + | LOC107987123 | 9 | + |
| exon-intron | LOC105370156 | 13 | - | RFC3 | 13 | - |
| exon-intron | LOC105372989 | 22 | - | RNF215 | 22 | - |
| exon-exon | KCTD19 | 16 | - | DRC7 | 16 | + |
| intron-exon | AL080276.2 | 6 | + | MTRF1L | 6 | - |
| exon-intron | LOC107985946 | 2 | - | R3HDM1 | 2 | - |
| exon-exon | HDGF | 1 | + | PRCC | 1 | + |
| intron-exon | AL136301.1 | 13 | - | KPNA3 | 13 | - |
| intron-exon | C14orf93 | 14 | + | PSMB5 | 14 | + |
| intron-exon | LOC105372520 | 20 | - | TMX4 | 20 | - |
| exon-exon | SPEM3 | 17 | + | TMEM102 | 17 | + |
| intron-exon | TRA | 14 | + | TRAC | 14 | + |
| intron-exon | LOC105371529 | 17 | - | CCDC42 | 17 | - |
| intron-exon | LOC112533667 | 17 | - | FDXR | 17 | - |
| exon-exon | U2AF2 | 19 | + | PNPLA2 | 11 | - |
| exon-intron | PRKAR1A | 17 | + | MAMDC2 | 9 | - |
| exon-exon | ATG9A | 2 | + | ANKZF1 | 2 | + |
| intron-exon | SSH1 | 12 | + | DAO | 12 | + |
| exon-exon | STMN1 | 1 | - | PAQR7 | 1 | - |
| intron-exon | AC011462.1 | 19 | - | EXOSC5 | 19 | - |
| exon-intron | LINC00200 | 10 | + | ADARB2 | 10 | + |
| intron-exon | MOGS | 2 | + | MRPL53 | 2 | + |
| intron-exon | LOC105378663 | 1 | - | RRAGC | 1 | - |
| intron-exon | C16orf90 | 16 | + | CLUAP1 | 16 | + |
| intron-exon | AC103957.1 | 8 | - | PRAG1 | 8 | - |
| exon-intron | EXO1 | 1 | - | WDR64 | 1 | - |
| intron-exon | SMG7 | 1 | - | SMG7-AS1 | 1 | - |
| intron-exon | RPL28P3 | 5 | + | LINC02240 | 5 | + |
| exon-exon | LOC105371406 | 1 | + | FCGR1A | 1 | + |
| exon-intron | LINC01030 | 8 | - | LINC00534 | 8 | - |
| exon-exon | HDGF | 1 | + | PRCC | 1 | + |
| intron-exon | SPINT2 | 19 | - | PPP1R14A | 19 | - |
| intron-exon | ERI3 | 1 | - | USP2 | 11 | - |
| exon-intron | TRBV5-6 | 7 | + | TRB | 7 | + |
| exon-exon | LOC107984878 | 16 | - | NUDT7 | 16 | - |
| intron-exon | HIBCH | 2 | + | INPP1 | 2 | + |
| intron-exon | CACFD1 | 9 | - | ADAMTS13 | 9 | - |
| intron-exon | SH3YL1 | 2 | + | ACP1 | 2 | + |
| exon-exon | LINC00917 | 16 | - | RFLNB | 17 | - |
| exon-exon | CA10 | 17 | - | ZFPM2 | 8 | + |
| exon-exon | DUS2 | 16 | + | NFATC3 | 16 | + |
| intron-exon | TRIP11 | 14 | + | ATXN3 | 14 | + |
| exon-exon | NAPB | 20 | - | GZF1 | 20 | - |
| intron-exon | RNA18SP5 | 21 | + | RNA45SN1 | 21 | + |
| exon-exon | ZWILCH | 15 | + | CCNE1 | 19 | + |
| exon-exon | MTNR1A | 4 | - | F11-AS1 | 4 | - |
| exon-exon | COPB1 | 11 | - | RRAS2 | 11 | - |
| intron-exon | AC007563.2 | 2 | + | LOC101928278 | 2 | + |
| exon-exon | WDR4 | 21 | + | LOC105372817 | 21 | + |
| exon-intron | ZNF44 | 19 | - | LOC100289333 | 19 | - |
| exon-exon | RNA45SN3 | 21 | + | SOX12 | 20 | + |
| intron-exon | AL133346.1 | 6 | - | ATXN1-AS1 | 6 | - |
| exon-exon | HNRNPAB | 5 | + | HSPA1B | 6 | + |
| exon-intron | EBNA1BP2 | 1 | - | LOC105378685 | 1 | - |
| intron-exon | ARL13A | X | - | LOC286453 | X | - |
| exon-intron | LOC105375322 | 7 | + | ZNF736 | 7 | + |
| intron-exon | SYS1 | 20 | + | DBNDD2 | 20 | + |
| exon-intron | EIF4E | 4 | + | AC019131.1 | 4 | + |
| exon-exon | LOC107986822 | 7 | - | PON3 | 7 | - |
| exon-exon | LINC01107 | 2 | + | LOC112268434 | 2 | + |
| intron-exon | HSD11B1-AS1 | 1 | + | HSD11B1 | 1 | + |
| intron-exon | LOC105374280 | 3 | + | PLAAT1 | 3 | + |
| exon-exon | PCDHB6 | 5 | - | PCDHB3 | 5 | - |
| exon-intron | MIF-AS1 | 22 | - | AP000350.4 | 22 | - |
| exon-intron | STIM1-AS1 | 11 | + | STIM1 | 11 | + |
| exon-intron | HAGLR | 2 | - | HOXD3 | 2 | - |
| exon-exon | LOC105378733 | 1 | + | DMRTB1 | 1 | + |
| intron-exon | EPHA7 | 6 | + | LOC105377899 | 6 | + |
| exon-exon | NQO2-AS1 | 6 | + | NQO2 | 6 | + |
| intron-exon | MAF1 | 8 | - | SHARPIN | 8 | - |
| intron-exon | PPP1R11 | 6 | - | ZNRD1ASP | 6 | - |
| intron-exon | EXOSC8 | 13 | - | ALG5 | 13 | - |
| intron-exon | AL138921.1 | 10 | + | CWF19L1 | 10 | + |
| intron-exon | CCT6P3 | 7 | - | LOC105375330 | 7 | - |
| exon-intron | HLA-G | 6 | - | MICG | 6 | - |
| intron-exon | GJA9-MYCBP | 1 | - | RRAGC | 1 | - |
| exon-exon | GMPR2 | 14 | - | NEDD8-MDP1 | 14 | - |
| intron-exon | AC018616.1 | 8 | + | LOC101927118 | 8 | + |
| exon-exon | LOC107986178 | 4 | + | LOC105374483 | 4 | + |
| exon-intron | GPATCH2L | 14 | - | AC016526.4 | 14 | - |
| intron-exon | AC139795.2 | 5 | + | LOC202181 | 5 | + |
| exon-exon | CDKL5 | X | + | DCAF6 | 1 | + |
| exon-exon | GRK5 | 10 | + | PPP2R2D | 10 | + |
| intron-exon | STX17-AS1 | 9 | - | NR4A3 | 9 | - |
| exon-exon | ZNF473 | 19 | + | LOC400710 | 19 | + |
| exon-exon | PI16 | 6 | + | MUC16 | 19 | - |
| intron-exon | TTC33 | 5 | + | PRKAA1 | 5 | + |
| exon-exon | NKAPD1 | 11 | - | PIH1D2 | 11 | - |
| exon-exon | POLR3C | 1 | - | RNF115 | 1 | - |
| exon-intron | WDR97 | 8 | - | MAF1 | 8 | - |
| exon-intron | LOC101927495 | 11 | + | RPLP0P2 | 11 | + |
| intron-exon | FLJ22447 | 14 | - | LINC01303 | 14 | - |
| intron-exon | RP11-204C23.1 | 3 | - | CDKAL1 | 6 | + |
| intron-exon | EPS15-AS1 | 1 | - | EPS15 | 1 | - |
| intron-exon | MIS12 | 17 | - | DERL2 | 17 | - |
| intron-exon | AC023503.1 | 3 | + | LOC105377183 | 3 | + |
| intron-exon | DLGAP4-AS1 | 20 | + | TGIF2-RAB5IF | 20 | + |
| exon-exon | RNF225 | 19 | - | RPS5 | 19 | - |
| exon-intron | EIF4E | 4 | + | AC019131.1 | 4 | + |
| intron-exon | AC006148.1 | 7 | - | LOC101928211 | 7 | - |
| intron-exon | THAP5 | 7 | + | DNAJB9 | 7 | + |
| exon-intron | LOC105377500 | 4 | - | AC009567.1 | 4 | - |
| exon-intron | LOC102723324 | 9 | + | LOC102724773 | 9 | + |
| intron-exon | AC008641.1 | 5 | - | ANXA6 | 5 | - |
| intron-exon | IL23R | 1 | - | C1orf141 | 1 | - |
| exon-exon | GUSBP15 | 5 | - | GUSBP14 | 5 | - |
| exon-intron | FCHSD2 | 11 | + | LOC105369381 | 11 | + |
| intron-exon | LOC105374971 | 6 | + | RNF11 | 1 | + |
| exon-exon | RNA45SN1 | 21 | + | LMNA | 1 | + |
| intron-exon | SHOC2 | 10 | - | BBIP1 | 10 | - |
| exon-intron | LOC100128108 | 15 | + | DNM1P47 | 15 | + |
| exon-intron | TSFM | 12 | + | CTDSP2 | 12 | + |
| exon-exon | IMPDH1P9 | 6 | + | RNF144B | 6 | + |
| exon-exon | MAGEA4 | X | + | BAP1 | 3 | - |
| exon-exon | BTN2A3P | 6 | + | BTN3A3 | 6 | + |
| intron-exon | IGK | 2 | + | IGKV4-1 | 2 | + |
| intron-exon | AC004938.2 | 7 | - | TMED4 | 7 | - |
| exon-intron | SLC35F5 | 2 | - | AC017074.1 | 2 | - |
| intron-exon | CEACAM22P | 19 | + | IGSF23 | 19 | + |
| exon-exon | UBXN8 | 8 | - | GSR | 8 | - |
| intron-exon | AC087241.1 | 12 | + | LOC105369692 | 12 | + |
| intron-exon | GPCPD1 | 20 | - | LINC00654 | 20 | - |
| exon-exon | PGAP3 | 17 | + | ERBB2 | 17 | + |
| exon-intron | LOC441242 | 7 | - | CCT6P3 | 7 | - |
| intron-exon | UROD | 1 | - | HECTD3 | 1 | - |
| intron-exon | FBRS | 16 | - | ZNF689 | 16 | - |
| exon-exon | RNU6-5P | 2 | - | ANGEL1 | 14 | - |
| intron-exon | LINC01989 | 17 | - | ASIC2 | 17 | - |
| intron-exon | AC092574.2 | 4 | + | GAK | 4 | - |
| intron-exon | CRADD | 12 | + | SPATC1 | 8 | + |
| intron-exon | LOC105369362 | 11 | - | CHKA | 11 | - |
| exon-exon | LOC283683 | 15 | + | NIPA1 | 15 | + |
| exon-intron | LOC105373991 | 2 | + | ACKR3 | 2 | + |
| intron-exon | SKAP1 | 17 | + | LOC101927166 | 17 | + |
| intron-exon | FBXO34 | 14 | - | LOC105370509 | 14 | - |
| exon-exon | TOMM70 | 3 | + | LNP1 | 3 | + |
| intron-exon | PHF13 | 1 | - | KLHL21 | 1 | - |
| intron-exon | HACD2 | 3 | + | MYLK-AS1 | 3 | + |
| exon-intron | PRR7-AS1 | 5 | - | PDIA6 | 2 | + |
| intron-exon | LOC101926913 | 2 | - | LOC100130256 | 2 | - |
| exon-exon | P4HA1 | 10 | - | NFATC1 | 18 | + |
| intron-exon | MTERF4 | 2 | + | PASK | 2 | + |
| exon-exon | FBXO45 | 3 | - | SMCO1 | 3 | - |
| intron-exon | LIMS4 | 2 | - | MALL | 2 | - |
| intron-exon | P4HTM | 3 | - | ARIH2 | 3 | - |
| exon-intron | SFXN3 | 10 | + | C3orf20 | 3 | + |
| exon-intron | LOC105371372 | 16 | - | MLYCD | 16 | - |
| intron-exon | LOC107984416 | 11 | + | OR7E14P | 11 | + |
| exon-intron | YBX2 | 17 | - | AC121247.1 | 3 | - |
| intron-exon | AKAP3 | 12 | + | NDUFA9 | 12 | + |
| exon-exon | LOC107984869 | 16 | + | ABCC1 | 16 | + |
| exon-intron | LOC105375899 | 8 | - | RDH10-AS1 | 8 | - |
| intron-exon | SORBS3 | 8 | + | NEURL4 | 17 | - |
| exon-exon | KCTD19 | 16 | - | CCT6B | 17 | - |
| exon-exon | RCC1 | 1 | + | MROH7-TTC4 | 1 | + |
| intron-exon | LINC02500 | 4 | + | TENM3 | 4 | + |
| exon-intron | EP300-AS1 | 22 | - | EP300 | 22 | - |
| exon-intron | LOC105372677 | 20 | + | LOC105372678 | 20 | + |
| exon-exon | RNA45SN2 | 21 | + | PRKACA | 19 | - |
| exon-exon | BVES | 6 | + | BVES-AS1 | 6 | + |
| intron-exon | TST | 22 | + | MPST | 22 | + |
| intron-exon | RNA28SP | 21 | + | SOX12 | 20 | + |
| exon-exon | LOC107984858 | 16 | - | CMC2 | 16 | - |
| intron-exon | SPDYE10P | 7 | + | GTF2IP4 | 7 | + |
| exon-exon | IFNL4 | 19 | - | IFNL3 | 19 | - |
| exon-intron | SSTR2 | 17 | + | RP11-143K11.5 | 17 | + |
| intron-exon | DNM2 | 19 | + | CPEB3 | 10 | - |
| exon-intron | RPL27AP6 | 6 | - | CMTM7 | 3 | + |
| intron-exon | ZBTB20-AS1 | 3 | + | CRAT | 9 | - |
| exon-intron | LOC112268056 | 9 | - | GARNL3 | 9 | - |
| exon-intron | OST4 | 2 | - | AGBL5 | 2 | - |
| exon-exon | COX7A2L | 2 | - | LOC107985874 | 2 | - |
| intron-exon | TM2D3 | 15 | - | TTC23 | 15 | - |
| exon-exon | UVRAG | 11 | - | UVRAG-DT | 11 | - |
| intron-exon | LIN28B | 6 | - | LIN28B-AS1 | 6 | - |
| exon-exon | FAM71B | 5 | - | MED7 | 5 | - |
| exon-exon | MICA | 6 | - | MICA-AS1 | 6 | - |
| exon-intron | CATSPER4 | 1 | - | CNKSR1 | 1 | - |
| exon-exon | TCAM1P | 17 | + | CSH2 | 17 | + |
| intron-exon | AL445524.2 | 1 | + | TSNAX-DISC1 | 1 | + |
| exon-exon | C19orf81 | 19 | - | SYT3 | 19 | - |
| exon-exon | MBD6 | 12 | - | DDIT3 | 12 | - |
| exon-intron | RUVBL1 | 3 | + | EEFSEC | 3 | + |
| exon-intron | LOC105377246 | 4 | - | RP11-506N2.1 | 4 | - |
| exon-exon | GGT7 | 20 | - | DERL1 | 8 | - |
| exon-intron | LOC105375975 | 9 | - | LOC105375974 | 9 | - |
| exon-exon | RPL38 | 17 | + | TTYH2 | 17 | + |
| exon-exon | RPL32P18 | 7 | + | ZNF689 | 16 | - |
| exon-intron | ADAM20 | 14 | - | ADAM21 | 14 | - |
| intron-exon | UNK | 17 | - | H3-3B | 17 | - |
| intron-exon | RNR2 | MT | + | FBXO34 | 14 | + |
| exon-exon | SNU13 | 22 | - | CHD5 | 1 | + |
| exon-intron | DNAJB2 | 2 | + | ATP6V1H | 8 | - |
| intron-exon | LOC105371954 | 18 | - | LINC00470 | 18 | - |
| intron-exon | MORN1 | 1 | + | RER1 | 1 | + |
| exon-intron | PRPSAP2 | 17 | - | LOC101929141 | 17 | - |
| intron-exon | EXOSC7 | 3 | + | CLEC3B | 3 | + |
| exon-exon | SDF2 | 17 | - | KIAA0100 | 17 | - |
| intron-exon | PJVK | 2 | - | PRKRA | 2 | - |
| intron-exon | NDUFAF6 | 8 | - | CCNE2 | 8 | - |
| intron-exon | ATP5ME | 4 | + | MYL5 | 4 | + |
| exon-exon | LOC107985046 | 1 | - | LOC112268230 | 1 | - |
| exon-exon | TUBA1B | 12 | + | LOC105369760 | 12 | + |
| exon-intron | TEX43 | 5 | + | LOC105379162 | 5 | + |
| exon-intron | SYNRG | 17 | + | DDX52 | 17 | + |
| intron-exon | DPM2 | 9 | - | PIP5KL1 | 9 | - |
| intron-exon | STPG2 | 4 | + | NMD3 | 3 | + |
| intron-exon | SH3YL1 | 2 | + | ACP1 | 2 | + |
| intron-exon | AC021739.2 | 15 | - | AKAP13 | 15 | - |
| intron-exon | RNF31 | 14 | - | PSME2 | 14 | - |
| intron-exon | PLPPR3 | 19 | + | AZU1 | 19 | + |
| intron-exon | SAMD13 | 1 | - | LOC107985046 | 1 | - |
| exon-exon | LOC105378061 | 6 | + | MYCT1 | 6 | + |
| intron-exon | RP11-313F23.3 | 12 | + | PRDM7 | 16 | - |
| intron-exon | RUNX2 | 6 | - | RUNX2-AS1 | 6 | - |
| exon-exon | NEK11 | 3 | - | ASTE1 | 3 | - |
| exon-exon | ARF1 | 1 | + | SLC7A5 | 16 | - |
| exon-exon | RCCD1 | 15 | + | PRC1-AS1 | 15 | + |
| exon-exon | KTN1 | 14 | + | BCAP31 | X | - |
| intron-exon | HSPA14 | 10 | - | CDNF | 10 | - |
| exon-exon | ADIG | 20 | + | ARHGAP40 | 20 | + |
| intron-exon | LOC105377981 | 6 | - | TRDN | 6 | - |
| intron-exon | AC011477.8 | 19 | - | LOC101060187 | 19 | - |
| intron-exon | AC093835.1 | 4 | - | LOC105377478 | 4 | - |
| exon-exon | TNP1 | 2 | - | FEM1B | 15 | + |
| exon-intron | LOC105373531 | 2 | - | AC009505.1 | 2 | - |
| exon-exon | PIGF | 2 | + | CRIPT | 2 | + |
| exon-intron | ND1 | MT | + | TXNRD1 | 12 | + |
| intron-exon | ANO1 | 11 | - | LINC02584 | 11 | - |
| intron-exon | AIP | 11 | - | TMEM134 | 11 | - |
| exon-intron | TRIL | 7 | + | AC005013.1 | 7 | + |
| intron-exon | WNT2 | 7 | + | LOC105375467 | 7 | + |
| exon-intron | LOC102724467 | 16 | + | LOC105371399 | 16 | + |
| intron-exon | AC008481.3 | 19 | - | ELAVL3 | 19 | - |
| intron-exon | LOC105371406 | 1 | + | FCGR1A | 1 | + |
| exon-intron | GMPR2 | 14 | - | NEDD8-MDP1 | 14 | - |
| intron-exon | KBTBD3 | 11 | + | AASDHPPT | 11 | + |
| exon-exon | FLOT1 | 6 | - | SMC5 | 9 | + |
| exon-intron | PDIA3 | 15 | - | CATSPER2P1 | 15 | - |
| exon-intron | LOC107984881 | 16 | - | AC009084.1 | 16 | - |
| exon-exon | TRAV21 | 14 | + | TRAJ9 | 14 | + |
| intron-exon | CYB5R1 | 1 | - | CDH23 | 10 | + |
| exon-exon | MRPL57 | 13 | + | IVD | 15 | - |
| intron-exon | IGH | 14 | - | GSE1 | 16 | + |
| exon-exon | TRAV1-2 | 14 | + | TRAJ6 | 14 | + |
| exon-exon | RPL6P27 | 18 | - | CDIPT | 16 | - |
| intron-exon | FGF11 | 17 | - | TMEM102 | 17 | - |
| intron-exon | LOC111818956 | 8 | + | LOC100506990 | 8 | + |
| exon-intron | PHACTR4 | 1 | + | YTHDF2 | 1 | + |
| exon-intron | LDC1P | 1 | + | LINC01226 | 1 | + |
| intron-exon | LOC112533648 | 17 | - | PPP1R9B | 17 | - |
| exon-exon | PRORSD1P | 2 | + | CCDC88A | 2 | + |
| exon-exon | SIPA1L1 | 14 | + | PRORP | 14 | + |
| intron-exon | RNASET2 | 6 | - | RPS6KA2 | 6 | - |
| intron-exon | RANGAP1 | 22 | + | ZC3H7B | 22 | + |
| intron-exon | YES1 | 18 | - | PPP2R2D | 10 | + |
| exon-exon | UQCRFS1 | 19 | - | ATP5PF | 21 | - |
| intron-exon | TRB | 7 | + | TRBC2 | 7 | + |
| exon-exon | FN1 | 2 | - | TK1 | 17 | + |
| exon-exon | RBBP5 | 1 | - | FAM193A | 4 | + |
| exon-intron | TRBV4-1 | 7 | + | TRBJ2-1 | 7 | + |
| exon-exon | GPC2 | 7 | - | GAL3ST4 | 7 | - |
| exon-intron | RPL13A | 19 | + | IGLV1-44 | 22 | + |
| exon-intron | SERP1 | 3 | - | EIF2A | 3 | - |
| intron-exon | IGH | 14 | - | IGHM | 14 | - |
| exon-exon | ANXA2P2 | 9 | + | XBP1 | 22 | - |
| intron-exon | IGL | 22 | + | HPS3 | 3 | - |
| intron-exon | LOC111589215 | 17 | - | BRCA1 | 17 | - |
| exon-exon | RPS27 | 1 | + | NGDN | 14 | - |
| exon-intron | RPL31 | 2 | + | PNPLA7 | 9 | - |
| exon-exon | SCAMP4 | 19 | + | BTBD2 | 19 | - |
| exon-intron | LINC02694 | 15 | + | LOC105370777 | 15 | + |
| intron-exon | TAF15 | 17 | + | NR4A1 | 12 | + |
| intron-exon | IGH | 14 | - | IGHV3-15 | 14 | - |
| exon-exon | TRAV12-1 | 14 | + | TRAJ15 | 14 | + |
| exon-exon | UBE2Q2L | 15 | + | CSPG4P11 | 15 | + |
| exon-exon | LOC105375359 | 7 | - | FGL2 | 7 | - |
| intron-exon | TRB | 7 | + | TRBC1 | 7 | + |
| exon-intron | SRP9P1 | 10 | - | SYNE1 | 6 | - |
| exon-intron | AJM1 | 9 | + | PHPT1 | 9 | + |
| intron-exon | LINC01089 | 12 | - | RHOF | 12 | - |
| exon-exon | IKZF2 | 2 | - | AKIP1 | 11 | + |
| exon-exon | MYL9 | 20 | + | RPL3 | 22 | - |
| intron-exon | TRB | 7 | + | TRBC1 | 7 | + |
| intron-exon | ACTR3-AS1 | 2 | - | NFATC3 | 16 | + |
| exon-exon | FKRP | 19 | + | DDX11L2 | 2 | - |
| intron-exon | TRA | 14 | + | TRAC | 14 | + |
| exon-intron | CYP1B1 | 2 | + | LOC105374466 | 2 | + |
| exon-exon | LDC1P | 1 | + | LINC01226 | 1 | + |
| intron-exon | SPPL2B | 19 | + | GRAP | 17 | - |
| exon-intron | TRAJ36 | 14 | + | TRA | 14 | + |
| exon-intron | IGHG1 | 14 | - | IGH | 14 | - |
| exon-intron | MRPL57 | 13 | + | SATB1-AS1 | 3 | + |
| exon-intron | HIP1R | 12 | + | ADGRL3 | 4 | + |
| exon-intron | RPL17-C18orf32 | 18 | - | SLC24A2 | 9 | - |
| exon-intron | ZNF561-AS1 | 19 | + | ZNF562 | 19 | + |
| intron-exon | TRB | 7 | + | TRBC1 | 7 | + |
| exon-exon | ZFP14 | 19 | - | TXNDC12 | 1 | + |
| intron-exon | AP003108.1 | 11 | + | LOC105369329 | 11 | + |
| exon-intron | IGKV1D-39 | 2 | + | IGK | 2 | - |
| exon-exon | DENND4B | 1 | - | GTF3C5 | 9 | - |
| exon-intron | REXO1 | 19 | - | CHAF1A | 19 | + |
| exon-exon | LOC105375728 | 8 | + | TAF2 | 8 | - |
| exon-exon | ATP5MG | 11 | + | PRDX6 | 1 | + |
| intron-exon | HLA-U | 6 | + | HLA-A | 6 | + |
| exon-exon | ATP5MG | 11 | + | KDM5C | X | + |
| intron-exon | TRA | 14 | + | TRAV13-1 | 14 | + |
| exon-intron | ZNF596 | 8 | + | LOC101927566 | 8 | + |
| exon-exon | WDR5 | 9 | + | SPARC | 5 | + |
| exon-exon | PRKAR1B | 7 | - | SUN1 | 7 | + |
| exon-intron | TBC1D14 | 4 | + | GCSH | 16 | + |
| intron-exon | LOC105372520 | 20 | - | TMX4 | 20 | - |
| exon-intron | MYHAS | 17 | + | MYH3 | 17 | + |
| intron-exon | IGH | 14 | - | IGHE | 14 | - |
| exon-exon | LOC107985284 | 19 | - | INSR | 19 | - |
| exon-exon | RNA45SN2 | 21 | + | NPTX1 | 17 | - |
| exon-intron | LZTFL1 | 3 | - | MEMO1P1 | 21 | + |
| exon-exon | THRAP3 | 1 | + | HMGB1 | 13 | - |
| exon-intron | IGHV2-5 | 14 | - | WWOX | 16 | + |
| exon-exon | MCL1 | 1 | - | FTH1 | 11 | - |
| exon-exon | TRAV13-1 | 14 | + | TRAJ39 | 14 | + |
| intron-exon | RPS8 | 1 | + | CTSH | 15 | - |
| exon-exon | MARCKSL1 | 1 | + | SF3B4 | 1 | + |
| exon-intron | PRRC2B | 9 | + | PABPC1L | 20 | + |
| exon-exon | TRAV4 | 14 | + | TRAC | 14 | + |
| exon-intron | JARID2 | 6 | + | BTBD11 | 12 | + |
| exon-intron | IGKV3D-15 | 2 | + | IGK | 2 | - |
| exon-exon | LINC00173 | 12 | + | MAP1LC3B2 | 12 | + |
| exon-exon | FKBP5 | 6 | - | NSUN4 | 1 | - |
| intron-exon | NDST1-AS1 | 5 | + | NDST1 | 5 | + |
| exon-exon | IGHV3-48 | 14 | - | IGHV3-21 | 14 | - |
| exon-intron | TRAV41 | 14 | + | TRA | 14 | + |
| intron-exon | PDCD4 | 10 | - | PDCD4-AS1 | 10 | - |
| exon-exon | LOC441666 | 10 | - | EED | 11 | + |
| exon-exon | RNA45SN3 | 21 | + | EHBP1L1 | 11 | + |
| intron-exon | RNA18SP5 | 21 | + | SBK1 | 16 | + |
| exon-exon | ACOX1 | 17 | - | TBC1D20 | 20 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-intron | TBATA | 10 | - | CTNND1 | 11 | + |
| intron-exon | LOC105369323 | 11 | + | TMEM109 | 11 | + |
| exon-intron | SLC3A2 | 11 | + | FBXL20 | 17 | - |
| exon-intron | ZNF682 | 19 | - | ZNF93 | 19 | - |
| exon-exon | ACAD10 | 12 | + | TOPBP1 | 3 | + |
| exon-exon | DCAF7 | 17 | + | SMARCA4 | 19 | + |
| exon-exon | TRDJ3 | 14 | + | TRDC | 14 | + |
| intron-exon | LOC102723945 | 16 | + | RAB11FIP3 | 16 | + |
| exon-exon | VIM-AS1 | 10 | - | RAB24 | 5 | + |
| exon-exon | ACOX1 | 17 | - | TBC1D20 | 20 | - |
| exon-intron | USP40 | 2 | - | AUTS2 | 7 | + |
| intron-exon | IGH | 14 | - | IGHV2-5 | 14 | - |
| exon-exon | FUS | 16 | + | TULP4 | 6 | - |
| exon-exon | IGLV2-14 | 22 | + | IGLL5 | 22 | + |
| exon-exon | LOC107987206 | 14 | + | JUND | 19 | - |
| exon-intron | POLR2E | 19 | - | ALK | 2 | - |
| intron-exon | TRB | 7 | + | TRBV11-2 | 7 | + |
| intron-exon | C16orf96 | 16 | - | CDIP1 | 16 | - |
| exon-intron | CCNDBP1 | 15 | - | TMEM62 | 15 | - |
| exon-exon | AP4M1 | 7 | - | MCM7 | 7 | - |
| exon-intron | TBCD | 17 | + | NDUFS7 | 19 | + |
| exon-exon | CPED1 | 7 | + | RPL13P12 | 17 | - |
| exon-exon | GNL1 | 6 | + | PRR3 | 6 | + |
| exon-exon | CALN1 | 7 | - | HPS6 | 10 | + |
| intron-exon | LIMD2 | 17 | - | LOC101927898 | 17 | - |
| intron-exon | TRA | 14 | + | TRDC | 14 | + |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-intron | TRAV8-1 | 14 | + | TRA | 14 | + |
| exon-intron | ZNF66 | 19 | + | ZNF626 | 19 | + |
| exon-exon | RNU6-8 | 14 | - | COL7A1 | 3 | - |
| exon-intron | DDX6 | 11 | + | AP004609.3 | 11 | + |
| exon-exon | PTPN20 | 10 | + | BMS1P7 | 10 | - |
| exon-exon | CEP43 | 6 | + | CCR6 | 6 | + |
| exon-exon | TMEM251 | 14 | + | IFRD2 | 3 | + |
| exon-intron | RNU6-5P | 2 | - | HECW1 | 7 | + |
| exon-exon | LOC105375284 | 7 | + | EGFR | 7 | + |
| intron-exon | GOLGA8M | 15 | - | HERC2P9 | 15 | - |
| exon-exon | CHD4 | 12 | - | CFAP74 | 1 | - |
| exon-exon | MAPRE3 | 2 | + | DGCR5 | 22 | + |
| exon-exon | LOC105373310 | X | + | VSIG1 | X | + |
| exon-intron | RNU6-2 | 19 | + | IQGAP1 | 15 | + |
| exon-exon | TSC22D1 | 13 | - | CCDC115 | 2 | - |
| exon-exon | SWI5 | 9 | + | LOC105376286 | 9 | + |
| exon-exon | CYTB | MT | - | H2AX | 11 | + |
| exon-exon | PCDHB2 | 5 | + | SLC1A2 | 11 | - |
| exon-exon | HSPA9 | 5 | - | ND4 | MT | + |
| intron-exon | KCNAB2 | 1 | - | NPHP4 | 1 | - |
| exon-intron | RAB9B | X | - | PLP1 | X | - |
| exon-exon | EEF1A1P5 | 9 | + | PLP1 | X | + |
| exon-exon | ATP5MG | 11 | + | RPL30 | 8 | + |
| exon-exon | PRNP | 20 | + | MAP1A | 15 | + |
| exon-intron | TRIM8 | 10 | + | FUS | 16 | + |
| exon-intron | LOC105374101 | 3 | + | CLTCL1 | 22 | - |
| intron-exon | AP1B1 | 22 | + | RFPL1 | 22 | + |
| exon-intron | SLC26A4 | 7 | - | SLC26A4-AS1 | 7 | - |
| exon-exon | NRN1 | 6 | - | FGF2 | 4 | + |
| exon-exon | MAP3K4 | 6 | + | SNX9 | 6 | + |
| exon-exon | RPL23AP53 | 8 | - | LOC101927506 | 8 | - |
| exon-exon | ZBTB46 | 20 | - | DNAJC5 | 20 | + |
| intron-exon | THY1 | 11 | - | VAPA | 18 | - |
| exon-exon | RNA45SN1 | 21 | + | NGEF | 2 | - |
| intron-exon | LOC105377752 | 5 | + | THOC3 | 5 | - |
| exon-intron | H2BU1 | 1 | + | AL139288.2 | 1 | + |
| exon-exon | POU2F1 | 1 | + | MBNL1 | 3 | + |
| exon-exon | CDK5 | 7 | - | COX2 | MT | + |
| exon-exon | C1orf61 | 1 | - | RAB6A | 11 | - |
| exon-exon | DDX23 | 12 | - | RPS23 | 5 | - |
| exon-exon | ARPP21 | 3 | + | LOC284685 | 1 | - |
| intron-exon | MAMLD1 | X | + | GNAS | 20 | + |
| intron-exon | NPIPB2 | 16 | - | GSPT1 | 16 | - |
| exon-intron | GAS5 | 1 | - | DARS2 | 1 | - |
| exon-intron | CCT2 | 12 | + | COX3 | MT | + |
| exon-exon | LOC105372850 | 22 | - | NSD2 | 4 | + |
| exon-exon | RNA45SN2 | 21 | + | PPP2R2C | 4 | - |
| exon-exon | TMEM108 | 3 | + | DTNB | 2 | - |
| exon-exon | CARHSP1 | 16 | - | PPP3CA | 4 | + |
| exon-intron | CRLF3 | 17 | - | ITGAX | 16 | + |
| exon-exon | RNA45SN2 | 21 | + | GNAZ | 22 | + |
| intron-exon | NCAN | 19 | + | NPTXR | 22 | - |
| exon-exon | CSE1L | 20 | + | RBM39 | 20 | - |
| exon-exon | FLVCR1-DT | 1 | - | SPATA45 | 1 | - |
| exon-exon | GEMIN4 | 17 | - | VPS53 | 17 | - |
| exon-intron | NDFIP1 | 5 | + | INPP5B | 1 | + |
| intron-exon | LINC00869 | 1 | + | ATP1B3 | 3 | + |
| exon-intron | GAREM1 | 18 | + | AC025887.2 | 18 | + |
| exon-intron | LOC107986638 | 6 | + | LOC105377959 | 6 | + |
| intron-exon | RNA28SP | 21 | + | TMEM178A | 2 | + |
| intron-exon | LOC105378225 | 5 | - | ARSI | 5 | - |
| intron-exon | AC018730.2 | 2 | + | POU3F3 | 2 | + |
| exon-exon | JUN | 1 | - | USP22 | 17 | - |
| exon-intron | TANC2 | 17 | - | RP11-180P8.1 | 17 | - |
| exon-exon | DGCR5 | 22 | + | NAP1L1 | 12 | - |
| intron-exon | THSD1 | 13 | - | LOC105370207 | 13 | - |
| exon-exon | CDK19 | 6 | - | MTREX | 5 | + |
| exon-exon | CLU | 8 | - | CHCHD2 | 7 | - |
| intron-exon | CFAP92 | 3 | - | PLK5 | 19 | + |
| exon-exon | BEX1 | X | - | COX2 | MT | + |
| exon-exon | PKNOX2 | 11 | + | PSD3 | 8 | - |
| intron-exon | LOC107985772 | 2 | - | ANAPC1P2 | 2 | - |
| exon-exon | CCND3 | 6 | - | CFL1 | 11 | + |
| intron-exon | NDUFB1 | 14 | - | LOC100129034 | 9 | + |
| intron-exon | LOC110120973 | 3 | + | ZIC1 | 3 | + |
| exon-exon | LINC02021 | 3 | + | LOC107986131 | 3 | + |
| exon-exon | LOC112268239 | 1 | + | SETDB1 | 1 | + |
| exon-exon | KLC1 | 14 | + | TECPR2 | 14 | + |
| exon-exon | KLF4 | 9 | - | CYB5A | 18 | - |
| exon-exon | PKM | 15 | - | RHNO1 | 12 | + |
| exon-intron | ZNF426-DT | 19 | + | ZNF561-AS1 | 19 | + |
| exon-exon | SEZ6L2 | 16 | - | RNA45SN3 | 21 | + |
| exon-intron | LOC105378375 | 10 | + | LINC00856 | 10 | + |
| intron-exon | HIPK2 | 7 | + | TBXAS1 | 7 | + |
| exon-exon | LOC107984140 | 19 | - | KDELR1 | 19 | - |
| exon-intron | GLUD1P3 | 10 | + | SEC24C | 10 | + |
| exon-exon | OCIAD1 | 4 | + | SPATA5 | 4 | + |
| exon-exon | ND3 | MT | + | CYTB | MT | + |
| exon-exon | LOC107984405 | 11 | + | NRGN | 11 | + |
| exon-intron | TMEM14B | 6 | + | MAK | 6 | + |
| exon-intron | TSNAX | 1 | - | AL445524.2 | 1 | - |
| exon-exon | CLDN11 | 3 | + | SLC7A14 | 3 | + |
| exon-exon | GOLGA7 | 8 | + | YWHAB | 20 | + |
| exon-exon | BOLA2-SMG1P6 | 16 | - | SMG1P2 | 16 | - |
| exon-exon | ERI1 | 8 | + | PCNP | 3 | + |
| exon-exon | RPS12 | 6 | + | MARCHF6 | 5 | + |
| intron-exon | AC117464.1 | 3 | + | LOC105377188 | 3 | + |
| exon-exon | UBE2Q2L | 15 | + | CSPG4P11 | 15 | + |
| intron-exon | EIF4G3 | 1 | - | SLX1B-SULT1A4 | 16 | - |
| exon-exon | WASHC1 | 9 | - | RAPGEFL1 | 17 | + |
| exon-exon | ABCA5 | 17 | - | TIAM1 | 21 | - |
| exon-exon | RNA45SN1 | 21 | + | APC2 | 19 | + |
| exon-exon | HSPA2 | 14 | + | RNPEPL1 | 2 | + |
| exon-exon | LOC112268458 | 3 | - | LOC220729 | 3 | - |
| intron-exon | LOC105379273 | Y | - | HMGB1P5 | 3 | + |
| exon-exon | CREB3 | 9 | + | CALU | 7 | + |
| exon-exon | RN7SL4P | 3 | + | SV2B | 15 | + |
| intron-exon | DYNLT1 | 6 | + | SYTL3 | 6 | + |
| exon-exon | RUNDC3A | 17 | + | NLGN3 | X | - |
| exon-intron | PAQR3 | 4 | + | LINC01088 | 4 | + |
| exon-exon | ROGDI | 16 | - | NFIX | 19 | + |
| intron-exon | RP11-298J20.4 | 10 | + | ZRANB1 | 10 | + |
| exon-exon | CLTC | 17 | + | FOSL2 | 2 | + |
| exon-intron | TCF4 | 18 | - | CNDP1 | 18 | + |
| exon-exon | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| intron-exon | LOC105370397 | 14 | - | PRKAR1B | 7 | - |
| exon-intron | PIP4K2C | 12 | + | ACSS1 | 20 | - |
| exon-exon | RABL6 | 9 | + | DLGAP4 | 20 | + |
| exon-exon | HTT | 4 | + | OTUD4 | 4 | - |
| intron-exon | RNR2 | MT | + | RFXANK | 19 | - |
| exon-intron | LOC105378239 | 5 | + | AC010476.2 | 5 | + |
| exon-exon | RPL37A | 2 | + | GPR37L1 | 1 | - |
| exon-intron | SLITRK2 | X | + | MIR892C | X | + |
| exon-intron | UCHL1 | 4 | + | FTLP3 | 20 | + |
| exon-exon | ND4 | MT | + | MRPL23 | 11 | + |
| exon-intron | VPS13B-DT | 8 | - | STK3 | 8 | - |
| exon-exon | DENND6A-DT | 3 | + | FAM107A | 3 | - |
| exon-exon | LGI3 | 8 | - | CCDC124 | 19 | - |
| exon-exon | SNAP25 | 20 | + | PAK5 | 20 | - |
| exon-intron | FGD5-AS1 | 3 | - | FGD5 | 3 | - |
| exon-exon | POLR2J3 | 7 | - | IPO13 | 1 | - |
| exon-exon | KLC1 | 14 | + | SLC6A1 | 3 | + |
| exon-exon | EIF4E2 | 2 | - | EIF4E2 | 2 | + |
| exon-exon | CLGN | 4 | - | TBCK | 4 | - |
| exon-intron | BAG6 | 6 | - | CLMN | 14 | - |
| intron-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| exon-exon | FGD1 | X | + | GNL3L | X | + |
| exon-intron | HIF1A-AS3 | 14 | - | HIF1A | 14 | - |
| exon-intron | RPLP2 | 11 | + | LOC102724066 | 16 | - |
| exon-exon | POLR2F | 22 | + | TM4SF1 | 3 | - |
| intron-exon | RORC | 1 | + | C2CD4D-AS1 | 1 | + |
| exon-intron | HNRNPU | 1 | - | RNR1 | MT | + |
| exon-exon | ZFHX3 | 16 | - | WARS2 | 1 | - |
| exon-exon | RPS27A | 2 | + | LOC105369831 | 12 | + |
| intron-exon | SOCS6 | 18 | - | LOC107985158 | 18 | - |
| exon-exon | MPV17 | 2 | - | ITGB4 | 17 | + |
| exon-intron | RNU6-3P | X | - | KMT5A | 12 | + |
| intron-exon | LOC107032825 | X | + | FTH1P8 | X | + |
| exon-exon | RPL11 | 1 | + | CCNO | 5 | - |
| intron-exon | IQANK1 | 8 | - | LOC105375800 | 8 | - |
| exon-exon | RPS21 | 20 | + | NME1-NME2 | 17 | - |
| exon-exon | P3H1 | 1 | - | NCAPG2 | 7 | - |
| exon-exon | GGNBP2 | 17 | + | NAV2 | 11 | + |
| exon-exon | UVRAG | 11 | + | VOPP1 | 7 | - |
| exon-exon | CRIP1 | 14 | + | FASN | 17 | - |
| intron-exon | PLEKHA7 | 11 | - | GRSF1 | 4 | - |
| intron-exon | BRD9 | 5 | + | TRIP13 | 5 | + |
| intron-exon | LOC105373791 | 2 | + | COL3A1 | 2 | + |
| exon-exon | CCAT1 | 8 | - | PCAT2 | 8 | - |
| intron-exon | LOC101928626 | 1 | + | AGPAT2 | 9 | + |
| exon-intron | FTL | 19 | + | YBX3 | 12 | - |
| exon-exon | RPS17 | 15 | - | HMGN4 | 6 | + |
| exon-exon | RNA45SN1 | 21 | + | CERS2 | 1 | - |
| exon-exon | GLOD4 | 17 | - | VIM | 10 | + |
| exon-exon | NEURL1 | 10 | + | SH3PXD2A | 10 | + |
| exon-intron | CCAT1 | 8 | - | RPL23AP82 | 22 | - |
| exon-exon | SNHG21 | 15 | + | APH1A | 1 | - |
| exon-exon | ZNF83 | 19 | - | AGO3 | 1 | + |
| exon-intron | HADHA | 2 | - | RANBP2 | 2 | + |
| exon-exon | RPS23 | 5 | - | AP1B1 | 22 | - |
| exon-exon | SRA1 | 5 | - | ANKHD1-EIF4EBP3 | 5 | - |
| exon-exon | ATXN7L3B | 12 | + | NR2F1 | 5 | + |
| exon-intron | PAPPA | 9 | + | CDK14 | 7 | + |
| exon-intron | C11orf49 | 11 | + | AC013762.1 | 11 | - |
| exon-intron | CYP24A1 | 20 | + | LOC105372675 | 20 | + |
| exon-exon | RBM18 | 9 | - | SENP3-EIF4A1 | 17 | + |
| exon-exon | ZNF846 | 19 | - | PPP2CB | 8 | - |
| exon-exon | HARBI1 | 11 | + | ATG13 | 11 | + |
| exon-intron | NDUFA3 | 19 | + | FSD1 | 19 | - |
| exon-exon | HPS1 | 10 | - | HECTD2 | 10 | + |
| intron-exon | PIK3R3 | 1 | + | LOC101929626 | 1 | + |
| intron-exon | RIC1 | 9 | - | PICALM | 11 | - |
| exon-exon | DNAJB6 | 7 | + | RTF1 | 15 | + |
| exon-exon | RPL37 | 5 | - | MAPK1IP1L | 14 | + |
| exon-exon | PARPBP | 12 | + | NUBP1 | 16 | + |
| exon-exon | GON4L | 1 | - | CBFB | 16 | - |
| intron-exon | LOC105373437 | 2 | - | REREP3 | 15 | - |
| intron-exon | LOC107985841 | 2 | - | LOC105373397 | 2 | - |
| exon-exon | STON1-GTF2A1L | 2 | + | MATR3 | 5 | - |
| exon-exon | SPATC1L | 21 | + | RAB35 | 12 | + |
| exon-exon | ACTL9 | 19 | + | SRSF2 | 17 | + |
| exon-intron | VCY1B | Y | + | HP1BP3 | 1 | + |
| intron-exon | COX1 | MT | - | DNAJA2 | 16 | + |
| exon-exon | ERI3 | 1 | + | RPL23 | 17 | + |
| intron-exon | LRRC37A2 | 17 | + | ARID5A | 2 | - |
| intron-exon | PRMT9 | 4 | - | TMEM184C | 4 | - |
| intron-exon | PCMT1 | 6 | + | LRP11 | 6 | + |
| exon-exon | EIF3K | 19 | + | SHARPIN | 8 | + |
| intron-exon | ARL2-SNX15 | 11 | - | IGF2BP1 | 17 | - |
| exon-exon | OST4 | 2 | - | AGBL5 | 2 | - |
| exon-exon | ZNF397 | 18 | + | LIMK2 | 22 | - |
| exon-exon | BPIFA3 | 20 | - | SHARPIN | 8 | + |
| exon-exon | MOSPD3 | 7 | - | SEC16A | 9 | + |
| exon-exon | RRP7A | 22 | + | CUL4B | X | + |
| intron-exon | LOC107985996 | 2 | - | FBXO36 | 2 | - |
| exon-intron | ND1 | MT | - | LOC105370337 | 13 | + |
| exon-exon | REX1BD | 19 | + | SCAP | 3 | + |
| exon-exon | SFTPC | 8 | - | PHACTR4 | 1 | - |
| intron-exon | S100A10 | 1 | + | LOC105371441 | 1 | + |
| exon-intron | GSTA1 | 6 | + | LOC105375091 | 6 | + |
| exon-exon | WNT10B | 12 | + | IBA57 | 1 | - |
| intron-exon | LOC105371891 | 17 | - | DNAI2 | 17 | - |
| exon-exon | CCDC124 | 19 | + | LOC107985568 | 22 | + |
| exon-intron | KCNG4 | 16 | - | ADAD2 | 16 | - |
| intron-exon | ZNF135 | 19 | + | ZSCAN18 | 19 | + |
| intron-exon | RSL24D1P6 | 20 | - | TM9SF4 | 20 | - |
| intron-exon | DNAH14 | 1 | + | CTDNEP1 | 17 | + |
| exon-exon | FAM170B | 10 | - | RNF7 | 3 | - |
| exon-intron | LOC101929229 | 8 | + | AC011008.1 | 8 | + |
| exon-exon | RNF151 | 16 | + | LETM2 | 8 | - |
| intron-exon | MACROD2 | 20 | - | LHFPL2 | 5 | + |
| exon-intron | C1orf122 | 1 | - | LOC105378566 | 10 | - |
| exon-exon | H3C4 | 6 | - | MBTPS2 | X | - |
| exon-intron | SMIM13 | 6 | - | ELOVL2-AS1 | 6 | - |
| intron-exon | VKORC1L1 | 7 | + | PSPH | 7 | + |
| exon-exon | ZNF429 | 19 | - | LINC00664 | 19 | - |
| exon-exon | AKT2 | 19 | + | VPS4A | 16 | - |
| exon-exon | SNX32 | 11 | + | CD99 | Y | - |
| exon-exon | ISG15 | 1 | + | ACTG1 | 17 | + |
| exon-exon | L3MBTL2 | 22 | + | MGRN1 | 16 | - |
| exon-exon | MSTO2P | 1 | - | COX1 | MT | - |
| exon-exon | ND3 | MT | - | KNTC1 | 12 | - |
| exon-exon | PAOX | 10 | + | KIF22 | 16 | - |
| exon-exon | CCDC85B | 11 | + | ATP6V1F | 7 | - |
| exon-intron | ADAMTSL1 | 9 | + | SAXO1 | 9 | + |
| exon-exon | H3P6 | 2 | - | TPCN1 | 12 | - |
| exon-intron | NDUFA6 | 22 | + | NDUFA6-DT | 22 | + |
| exon-exon | RNF151 | 16 | + | PLK1 | 16 | - |
| exon-exon | DPM3 | 1 | + | CLK2 | 1 | + |
| exon-exon | NPW | 16 | - | C20orf27 | 20 | + |
| intron-exon | S100A14 | 1 | - | HIGD1A | 3 | + |
| exon-exon | S100A14 | 1 | - | MAGI1 | 3 | + |
| exon-exon | TMEM248 | 7 | + | LOC112268006 | 7 | + |
| exon-exon | HPCA | 1 | + | TMEM109 | 11 | - |
| exon-exon | CEP170 | 1 | + | PTPN20 | 10 | - |
| intron-exon | ITPR2 | 12 | - | RAB3GAP1 | 2 | - |
| intron-exon | LOC107985438 | 20 | - | GGTLC1 | 20 | - |
| exon-exon | CST1 | 20 | + | TEX19 | 17 | - |
| exon-exon | NUDT16L1 | 16 | - | ZNF746 | 7 | + |
| exon-exon | AFAP1 | 4 | - | FBXO42 | 1 | + |
| exon-exon | SBNO1 | 12 | + | AKAP12 | 6 | - |
| intron-exon | GSTO1 | 10 | + | GSTO2 | 10 | + |
| exon-exon | ZNF599 | 19 | - | NUCKS1 | 1 | + |
| exon-intron | LOC105371093 | 16 | + | ERCC4 | 16 | + |
| exon-exon | TSPAN32 | 11 | - | SMPD1 | 11 | - |
| exon-exon | RPP21 | 6 | - | TRIM39 | 6 | - |
| exon-exon | S100A14 | 1 | - | PDCD2 | 6 | + |
| exon-exon | PLEKHG4 | 16 | - | NUDCD3 | 7 | + |
| intron-exon | LINC00534 | 8 | + | LINC01030 | 8 | + |
| intron-exon | NDUFB2 | 7 | + | SLC6A2 | 16 | - |
| intron-exon | CKAP2L | 2 | + | RRP7A | 22 | + |
| exon-exon | LSM10 | 1 | - | SUGP2 | 19 | + |
| exon-exon | TEN1-CDK3 | 17 | - | LOC100996404 | 22 | + |
| exon-exon | CLIC3 | 9 | - | PI4KB | 1 | + |
| exon-exon | BRAP | 12 | + | SMPD4BP | 2 | - |
| exon-exon | SHISA4 | 1 | + | ISLR | 15 | - |
| exon-exon | SETD6 | 16 | - | MAP4 | 3 | + |
| exon-exon | IGFBP6 | 12 | + | PLA2G6 | 22 | + |
| exon-exon | CHADL | 22 | - | TRIM37 | 17 | + |
| exon-exon | CCDC197 | 14 | - | SF3A2 | 19 | - |
| intron-exon | BMS1P10 | 9 | + | AQP7P1 | 9 | + |
| exon-exon | LOC112268127 | 14 | - | SERPINA5 | 14 | - |
| exon-exon | SELENOW | 19 | - | NELFCD | 20 | - |
| intron-exon | S100A14 | 1 | - | CLDND1 | 3 | + |
| intron-exon | LINC01258 | 4 | - | SERPINF2 | 17 | - |
| intron-exon | AC096574.4 | 2 | - | LOC643387 | 2 | - |
| intron-exon | TIPIN | 15 | - | DIS3L | 15 | - |
| exon-exon | ERI3 | 1 | + | LINC01824 | 2 | - |
| exon-exon | FAM167B | 1 | - | SPAG7 | 17 | + |
| intron-exon | VAMP1 | 12 | - | TAPBPL | 12 | - |
| exon-exon | ND1 | MT | - | INSR | 19 | + |
| intron-exon | EP400P1 | 12 | + | LIPA | 10 | + |
| exon-exon | MYO18A | 17 | - | TXNDC11 | 16 | + |
| exon-intron | SPACA3 | 17 | + | UBE2F-SCLY | 2 | - |
| exon-exon | MFSD9 | 2 | - | EEF1A1 | 6 | + |
| exon-exon | FUZ | 19 | - | AP2A1 | 19 | - |
| exon-exon | CCDC197 | 14 | + | PBX3 | 9 | - |
| intron-exon | KLC1 | 14 | - | COA8 | 14 | - |
| intron-exon | KCMF1 | 2 | + | LINC01964 | 2 | + |
| exon-exon | NF1 | 17 | - | RAB27A | 15 | - |
| exon-exon | PNPLA2 | 11 | + | TKTL2 | 4 | + |
| exon-exon | ARL2-SNX15 | 11 | - | MBD1 | 18 | + |
| intron-exon | AC020765.4 | 16 | + | PPP1R32 | 11 | - |
| exon-intron | PEPD | 19 | + | SMARCA2 | 9 | - |
| exon-exon | PLEKHG4 | 16 | - | MPC2 | 1 | + |
| exon-exon | RPS16 | 19 | + | SLC1A5 | 19 | + |
| intron-exon | AC008915.2 | 16 | - | COG7 | 16 | - |
| intron-exon | AC098679.5 | 4 | - | TMEM144 | 4 | - |
| exon-intron | CCDC18 | 1 | + | CCDC18-AS1 | 1 | + |
| intron-exon | MACF1 | 1 | + | LOC105378950 | 1 | + |
| exon-exon | TTR | 18 | + | SLC6A10P | 16 | + |
| exon-exon | AMZ2P1 | 17 | + | DHTKD1 | 10 | - |
| exon-exon | CHADL | 22 | - | CHPF2 | 7 | - |
| exon-intron | CTRC | 1 | + | LOC101928953 | 8 | - |
| intron-exon | ZNF391 | 6 | + | ODC1 | 2 | + |
| exon-exon | ERV3-1-ZNF117 | 7 | + | LOC105375330 | 7 | + |
| exon-intron | RPL7AP7 | 6 | + | MICG | 6 | + |
| exon-exon | OLFM2 | 19 | + | PHF5A | 22 | + |
| exon-exon | DPM3 | 1 | + | EIF3L | 22 | - |
| exon-exon | C1orf122 | 1 | - | WFDC3 | 20 | + |
| exon-exon | FIS1 | 7 | - | CCAR2 | 8 | + |
| intron-exon | TRNV | MT | - | TNS1 | 2 | + |
| intron-exon | AC098679.5 | 4 | - | TMEM144 | 4 | - |
| intron-exon | RNF169 | 11 | + | XRRA1 | 11 | + |
| exon-intron | LOC390705 | 16 | + | AC133548.2 | 16 | + |
| exon-intron | GSTM5 | 1 | - | EPS8L3 | 1 | - |
| exon-exon | CTRC | 1 | + | CMTM6 | 3 | + |
| exon-exon | RRP7A | 22 | + | NUPR2 | 7 | + |
| exon-exon | AKR7A2 | 1 | - | RRAGC | 1 | + |
| exon-intron | SPATA3 | 2 | - | SPATA3-AS1 | 2 | - |
| exon-exon | VAMP5 | 2 | + | SURF4 | 9 | + |
| intron-exon | LIX1L | 1 | - | RBM8A | 1 | - |
| exon-exon | EDF1 | 9 | + | SQSTM1 | 5 | - |
| exon-intron | LOC105373774 | 2 | - | AC021851.1 | 2 | - |
| exon-intron | C1orf141 | 1 | + | IL23R | 1 | + |
| exon-exon | TMEM38A | 19 | + | EIF1 | 17 | - |
| intron-exon | AL078602.1 | 6 | - | LOC107986666 | 6 | - |
| intron-exon | PRMT9 | 4 | - | TMEM184C | 4 | - |
| exon-exon | SPATC1L | 21 | + | COL1A2 | 7 | - |
| exon-exon | NUDT21 | 16 | + | ANKRD7 | 7 | - |
| exon-exon | LOC105371559 | 17 | + | LOC105370061 | 12 | - |
| intron-exon | TUBA3E | 2 | - | GNB1 | 1 | + |
| exon-exon | ETFB | 19 | + | GPR89A | 1 | - |
| exon-exon | PELP1 | 17 | - | GK2 | 4 | + |
| exon-exon | NUCKS1 | 1 | - | CLDND1 | 3 | + |
| intron-exon | CLRN1-AS1 | 3 | + | IL17D | 13 | - |
| intron-exon | AL121899.2 | 20 | + | TGM3 | 20 | + |
| exon-exon | CCDC121 | 2 | - | LYSMD2 | 15 | + |
| intron-exon | MTHFD1L | 6 | + | LOC102723831 | 6 | + |
| intron-exon | MPP3 | 17 | - | CFAP97D1 | 17 | - |
| exon-exon | VAMP5 | 2 | + | CABIN1 | 22 | - |
| exon-exon | L3MBTL2 | 22 | + | CACNA2D4 | 12 | + |
| intron-exon | PIK3IP1-DT | 22 | - | PIK3IP1 | 22 | - |
| exon-exon | TMPRSS5 | 11 | + | SPATS2L | 2 | - |
| exon-exon | TIMM8B | 11 | + | TMX4 | 20 | + |
| intron-exon | LOC107985534 | 22 | - | ASPHD1 | 16 | + |
| exon-exon | WNT10B | 12 | + | IBA57 | 1 | - |
| exon-exon | LINC00221 | 14 | + | SLC15A4 | 12 | + |
| exon-exon | DNAJB8 | 3 | + | USP39 | 2 | - |
| intron-exon | UBL7-AS1 | 15 | - | LOC102723714 | 15 | - |
| exon-exon | FAM181B | 11 | - | CD300LB | 17 | + |
| exon-exon | CCDC85B | 11 | + | GKAP1 | 9 | + |
| exon-exon | L3MBTL2 | 22 | + | PDE1A | 2 | + |
| intron-exon | UPK3B | 7 | + | RASD1 | 17 | + |
| intron-exon | RDH10-AS1 | 8 | + | LOC105375899 | 8 | + |
| exon-intron | LOC105374652 | 5 | - | AC012629.2 | 5 | - |
| exon-exon | PMM1 | 22 | + | SPAG9 | 17 | + |
| exon-exon | SPATC1L | 21 | - | ASPHD1 | 16 | - |
| exon-intron | GTF2IRD2P1 | 7 | + | ARPIN-AP3S2 | 15 | - |
| exon-exon | FAM102B | 1 | + | HENMT1 | 1 | + |
| intron-exon | LOC105375715 | 8 | - | AARD | 8 | - |
| exon-intron | CLCNKB | 1 | + | TMEM189-UBE2V1 | 20 | + |
| exon-intron | NCKAP5L | 12 | - | SLC2A4 | 17 | - |
| exon-intron | SPATC1L | 21 | + | LOC102724084 | 16 | - |
| exon-exon | LGI4 | 19 | + | RPS17P16 | 22 | - |
| exon-intron | SRARP | 1 | + | STAG3L1 | 7 | - |
| exon-exon | WNT10B | 12 | + | WDR53 | 3 | + |
| exon-intron | MSTO1 | 1 | + | BRF1 | 14 | - |
| exon-exon | SPATC1L | 21 | - | FPGT-TNNI3K | 1 | - |
| exon-exon | PLTP | 20 | + | ATP5F1B | 12 | + |
| exon-exon | PYCARD-AS1 | 16 | - | RASSF8 | 12 | - |
| intron-exon | MTND2P28 | 1 | - | BBS10 | 12 | + |
| intron-exon | AC010395.1 | 5 | - | TPGS2 | 18 | + |
| exon-intron | GDF11 | 12 | + | CPSF4 | 7 | + |
| exon-exon | L3MBTL2 | 22 | + | WEE1 | 11 | - |
| exon-exon | SPAG8 | 9 | - | RNF4 | 4 | - |
| exon-intron | TIMM17B | X | + | LOC101927572 | 19 | + |
| exon-intron | CLIC3 | 9 | - | PRKRA | 2 | + |
| intron-exon | GNAL | 18 | + | MPPE1 | 18 | + |
| exon-exon | FOXRED1 | 11 | + | CEBPD | 8 | + |
| exon-exon | LY6H | 8 | + | BOD1L2 | 18 | - |
| exon-exon | TAOK2 | 16 | - | CPEB2 | 4 | - |
| exon-exon | KCNH3 | 12 | + | MCRS1 | 12 | + |
| exon-intron | FATE1 | X | - | PPFIBP2 | 11 | + |
| exon-intron | IL32 | 16 | + | EFCAB14-AS1 | 1 | + |
| exon-exon | LOC105373298 | X | + | TSPAN6 | X | + |
| intron-exon | SPANXA2-OT1 | X | - | TUBA1B | 12 | + |
| exon-intron | CCDC124 | 19 | + | SLC35E4 | 22 | + |
| exon-exon | MLF2 | 12 | - | PACS2 | 14 | - |
| exon-exon | ISG15 | 1 | - | OR2H1 | 6 | - |
| intron-exon | ARL2-SNX15 | 11 | + | ABCA17P | 16 | - |
| exon-exon | NTMT1 | 9 | + | CATSPER3 | 5 | - |
| exon-exon | CLDND2 | 19 | - | NCAPD3 | 11 | - |
| exon-exon | CLIC3 | 9 | - | GID4 | 17 | - |
| exon-intron | CTRC | 1 | + | PM20D2 | 6 | + |
| intron-exon | LOC105379371 | 8 | - | LOC105379370 | 8 | - |
| exon-exon | ARL2-SNX15 | 11 | - | CYP1B1 | 2 | + |
| exon-exon | RBP1 | 3 | - | ADCK5 | 8 | - |
| exon-intron | LOC105374836 | 2 | - | MAJIN | 11 | + |
| intron-exon | ATG14 | 14 | - | FBXO34 | 14 | - |
| exon-exon | EDF1 | 9 | + | IRGC | 19 | - |
| exon-exon | PRELID1P6 | 2 | + | TRAPPC9 | 8 | + |
| exon-exon | CHADL | 22 | + | RNF4 | 4 | - |
| exon-exon | LOC107987335 | Y | + | EIF2S3 | X | - |
| exon-intron | APOC4-APOC2 | 19 | - | PDE12 | 3 | + |
| exon-exon | LOC100130531 | 1 | - | CCDC18 | 1 | - |
| exon-exon | VAMP5 | 2 | - | RIC8A | 11 | - |
| exon-exon | DCTN6 | 8 | + | GPR137 | 11 | - |
| exon-exon | COPA | 1 | - | ZNF333 | 19 | - |
| exon-exon | POLR2F | 22 | + | ATF4 | 22 | - |
| exon-exon | BRD3OS | 9 | - | BRD3OS | 9 | + |
| intron-exon | ACAP3 | 1 | + | SYVN1 | 11 | + |
| exon-exon | CCDC124 | 19 | + | RPL23 | 17 | + |
| exon-exon | WNT10B | 12 | + | TPST1 | 7 | - |
| exon-exon | SHISA4 | 1 | - | EIF6 | 20 | + |
| exon-exon | AKR7A2 | 1 | + | LOC730183 | 16 | + |
| exon-intron | TMPRSS5 | 11 | - | TTC39C | 18 | + |
| exon-exon | FATE1 | X | - | LY6E | 8 | - |
| exon-exon | PSCA | 8 | - | C1orf100 | 1 | - |
| exon-exon | SPATC1L | 21 | + | ISG15 | 1 | + |
| exon-exon | OST4 | 2 | - | AGBL5 | 2 | - |
| exon-exon | GTPBP4 | 10 | - | SERPINB1 | 6 | + |
| exon-intron | IGKV3D-7 | 2 | + | TGFBI | 5 | - |
| intron-exon | SLC25A26 | 3 | + | COX3 | MT | + |
| exon-exon | RPL6P27 | 18 | + | HMGA1 | 6 | - |
| intron-exon | LOC105379854 | 1 | + | WASH9P | 1 | + |
| exon-exon | RESF1 | 12 | - | BICD1 | 12 | - |
| exon-exon | LENG1 | 19 | - | CNOT3 | 19 | - |
| intron-exon | CTSB | 8 | - | FDFT1 | 8 | - |
| intron-exon | LARP1B | 4 | - | ABHD18 | 4 | - |
| exon-intron | UBE2B | 5 | - | LOC107984079 | 3 | + |
| exon-exon | LINC02649 | 10 | - | PFKFB3 | 10 | - |
| exon-exon | NDUFA3 | 19 | + | YBX3 | 12 | + |
| exon-intron | LOC107984960 | 1 | + | OPRM1 | 6 | + |
| exon-intron | IGKV4-1 | 2 | - | IGK | 2 | - |
| intron-exon | ZNF573 | 19 | - | RNA45SN1 | 21 | - |
| exon-intron | CHAMP1 | 13 | - | TBC1D10C | 11 | - |
| intron-exon | RBFOX2 | 22 | + | ADIPOR1 | 1 | + |
| exon-exon | AKAP13 | 15 | - | GALK2 | 15 | - |
| exon-intron | NXN | 17 | + | HOXB-AS3 | 17 | + |
| intron-exon | SLC35F1 | 6 | + | BAG6 | 6 | + |
| exon-exon | SENP3-EIF4A1 | 17 | - | LRRC75A | 17 | - |
| intron-exon | CAMK1 | 3 | - | ASF1B | 19 | + |
| exon-intron | IGKC | 2 | + | IGK | 2 | + |
| intron-exon | AC105036.3 | 15 | - | PTPN9 | 15 | - |
| exon-exon | LOC107985212 | 1 | + | LOC107985213 | 1 | + |
| exon-exon | PDAP1 | 7 | - | ARPC1B | 7 | - |
| exon-exon | SIVA1 | 14 | + | OAS3 | 12 | - |
| exon-intron | XRN2 | 20 | + | RTN4RL1 | 17 | + |
| intron-exon | LBHD1 | 11 | - | RPL17-C18orf32 | 18 | + |
| exon-intron | LINC01138 | 1 | + | FRG1HP | 9 | + |
| exon-intron | IGKC | 2 | + | IGK | 2 | + |
| intron-exon | UBE2K | 4 | - | SMIM14 | 4 | - |
| exon-intron | PRR22 | 19 | + | ARL10 | 5 | + |
| intron-exon | TRNV | MT | - | RNA45SN3 | 21 | + |
| exon-exon | RMND5B | 5 | - | RMND5B | 5 | + |
| exon-exon | PEBP1 | 12 | - | STARD3 | 17 | - |
| exon-exon | EPB41 | 1 | + | PBX4 | 19 | + |
| intron-exon | LOC105375361 | 7 | - | FDPSP2 | 7 | - |
| exon-exon | CHRNE | 17 | - | MINK1 | 17 | - |
| intron-exon | LOC112268138 | 14 | + | IGHG3 | 14 | + |
| intron-exon | THSD7B | 2 | - | INSYN1 | 15 | + |
| intron-exon | CACNA1A | 19 | + | C15orf40 | 15 | + |
| intron-exon | EEF1G | 11 | - | STMN1 | 1 | + |
| exon-exon | PILRB | 7 | - | PVRIG2P | 7 | - |
| exon-exon | RNA45SN1 | 21 | - | QSOX1 | 1 | - |
| exon-exon | CAPN1 | 11 | - | MBD6 | 12 | - |
| exon-exon | LOC107985284 | 19 | - | OS9 | 12 | - |
| exon-exon | MMP2 | 16 | - | NTMT1 | 9 | + |
| exon-exon | ZNF511 | 10 | - | CHFR | 12 | + |
| exon-exon | NCL | 2 | + | MCM6 | 2 | + |
| exon-exon | BANF1 | 11 | - | LASP1 | 17 | - |
| exon-intron | TRBC1 | 7 | - | TRB | 7 | - |
| intron-exon | MYO10 | 5 | + | CCL25 | 19 | - |
| exon-exon | THTPA | 14 | + | LOC102724814 | 14 | + |
| exon-exon | TNFAIP2 | 14 | - | CYB561A3 | 11 | + |
| intron-exon | RPLP2P3 | 11 | - | U2AF2 | 19 | - |
| exon-intron | NELFCD | 20 | - | RAE1 | 20 | - |
| exon-exon | SMAP2 | 1 | - | PAK2 | 3 | - |
| intron-exon | PCMT1 | 6 | + | LRP11 | 6 | + |
| exon-exon | HSP90AB2P | 4 | + | RAB28 | 4 | + |
| exon-exon | PDPN | 1 | + | CDH5 | 16 | - |
| exon-exon | CD74 | 5 | + | RARA | 17 | - |
| intron-exon | CCZ1 | 7 | + | CHMP4B | 20 | - |
| exon-intron | TMEM170A | 16 | + | PTCHD1-AS | X | + |
| exon-exon | CHADL | 22 | - | UBA7 | 3 | + |
| exon-exon | CHADL | 22 | - | PTMA | 2 | - |
| exon-intron | ZMAT5 | 22 | - | SEC31A | 4 | + |
| exon-intron | RBP5 | 12 | - | ZNF735 | 7 | - |
| exon-exon | MLLT11 | 1 | + | GABPB2 | 1 | + |
| exon-exon | AKR7A2 | 1 | - | CDC37 | 19 | + |
| exon-exon | RBM8A | 1 | + | LIX1L-AS1 | 1 | + |
| exon-exon | RPL38 | 17 | - | UNC5B | 10 | - |
| exon-intron | GSK3A | 19 | + | RNA28SP | 21 | - |
| exon-exon | GSK3A | 19 | + | LOC112268284 | 21 | - |
| exon-exon | ZIC1 | 3 | - | HNRNPA1P48 | 16 | - |
| exon-exon | LOC105369487 | 11 | - | FDX1 | 11 | - |
| exon-exon | HERC2P2 | 15 | - | SHC3 | 9 | + |
| intron-exon | RNR2 | MT | - | AMOTL1 | 11 | - |
| exon-exon | TULP1 | 6 | + | PSAP | 10 | + |
| exon-intron | WFS1 | 4 | + | LOC107986257 | 4 | + |
| intron-exon | ATAD5 | 17 | + | TEFM | 17 | + |
| exon-exon | POLR3C | 1 | + | PIAS3 | 1 | + |
| exon-exon | NDUFA3 | 19 | - | PMVK | 1 | + |
| intron-exon | ZBTB25 | 14 | - | GDI1 | X | - |
| exon-exon | CPO | 2 | - | FASTKD2 | 2 | - |
| exon-intron | WFS1 | 4 | + | LOC107986257 | 4 | + |
| intron-exon | AC245297.3 | 1 | + | LOC653513 | 1 | + |
| exon-exon | FERMT3 | 11 | + | TRPT1 | 11 | + |
| exon-exon | CEMP1 | 16 | - | AMDHD2 | 16 | - |
| intron-exon | ARL2-SNX15 | 11 | - | SPOP | 17 | + |
| exon-exon | ND6 | MT | - | DDX5 | 17 | + |
| intron-exon | TRNV | MT | - | ARPP19 | 15 | + |
| intron-exon | MMRN2 | 10 | - | SPINT2 | 19 | - |
| intron-exon | MMRN2 | 10 | - | SPINT2 | 19 | - |
| exon-exon | RAB31 | 18 | - | APCDD1 | 18 | - |
| intron-exon | AC008050.1 | 14 | + | NDFIP1 | 5 | - |
| exon-exon | PTP4A2 | 1 | + | RARA | 17 | - |
| exon-exon | ND4 | MT | - | ND4 | MT | + |
| exon-intron | COX3 | MT | - | ST20-MTHFS | 15 | + |
| exon-exon | USP9Y | Y | - | TTTY15 | Y | - |
| intron-exon | AC010522.1 | 19 | - | ZNF587B | 19 | - |
| intron-exon | LOC112268284 | 21 | - | RNA45SN2 | 21 | - |
| exon-exon | LINC00205 | 21 | - | COX1 | MT | - |
| intron-exon | AC245297.3 | 1 | + | LOC653513 | 1 | + |
| intron-exon | SARM1 | 17 | - | TMEM199 | 17 | - |
| intron-exon | FAM216A | 12 | + | VPS29 | 12 | + |
| intron-exon | AC013472.2 | 2 | - | DPYSL5 | 2 | - |
| intron-exon | SLC13A2 | 17 | - | RNF149 | 2 | + |
| intron-exon | KPNA7 | 7 | - | TSPAN31 | 12 | + |
| exon-exon | PSMD1 | 2 | - | COX1 | MT | - |
| intron-exon | LOC105375167 | 7 | + | ND5 | MT | - |
| exon-exon | MPV17 | 2 | + | NECAB1 | 8 | - |
| exon-exon | ND4L | MT | - | STX1B | 16 | + |
| exon-exon | SYNDIG1L | 14 | + | PSD | 10 | + |
| exon-intron | LINC01532 | 19 | - | LOC100506282 | 11 | + |
| exon-intron | GSG1 | 12 | - | SMIM27 | 9 | + |
| exon-exon | ND1 | MT | + | TFG | 3 | - |
| exon-exon | FAM228B | 2 | + | PITPNM2 | 12 | + |
| exon-exon | RNA45SN2 | 21 | - | LLGL1 | 17 | - |
| exon-exon | CCDC124 | 19 | - | CTDSP2 | 12 | + |
| exon-intron | SPATC1L | 21 | - | AP1G1 | 16 | + |
| exon-exon | SAP30-DT | 4 | + | HSPA9 | 5 | + |
| intron-exon | IL3RA | Y | + | ND2 | MT | - |
| intron-exon | PLA2R1 | 2 | + | APEX1 | 14 | - |
| exon-exon | DDR1 | 6 | - | EDEM3 | 1 | + |
| exon-exon | ZNF22 | 10 | - | RASSF4 | 10 | - |
| exon-exon | TFDP2 | 3 | + | SV2B | 15 | - |
| intron-exon | POLDIP3 | 22 | - | RETREG2 | 2 | - |
| exon-exon | TMEM258 | 11 | + | FADS1 | 11 | + |
| exon-exon | GEMIN6 | 2 | - | UBE2O | 17 | + |
| exon-intron | LOC107984834 | 16 | + | CORO1A | 16 | + |
| intron-exon | LOC101928626 | 1 | - | OSGEP | 14 | + |
| exon-exon | ZNF714 | 19 | - | PRDX2 | 19 | + |
| exon-exon | BPIFA3 | 20 | - | CCNI | 4 | + |
| exon-intron | TRAPPC6A | 19 | - | DNAJC18 | 5 | - |
| intron-exon | AC005899.6 | 17 | - | ZNF207 | 17 | - |
| exon-intron | ND1 | MT | + | PDCD4 | 10 | - |
| intron-exon | TSNAXIP1 | 16 | - | CHCHD2P2 | 5 | - |
| intron-exon | TBC1D14 | 4 | + | NNT | 5 | - |
| exon-intron | SERINC1 | 6 | - | ASPH | 8 | - |
| intron-exon | ZNF528 | 19 | + | DDAH1 | 1 | + |
| intron-exon | TRNL1 | MT | - | NFKB1 | 4 | - |
| exon-intron | ATP1A3 | 19 | + | GATD3B | 21 | + |
| intron-exon | FAM219A | 9 | - | C9orf24 | 9 | - |
| exon-intron | SLC12A6 | 15 | - | EMC4 | 15 | - |
| exon-exon | PPP1CC | 12 | - | ENC1 | 5 | + |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| exon-exon | SLC9A3R1 | 17 | - | SV2B | 15 | - |
| intron-exon | POLDIP3 | 22 | - | AP1AR | 4 | - |
| exon-exon | VSNL1 | 2 | + | RPL31 | 2 | - |
| intron-exon | TRNV | MT | - | ACTR2 | 2 | - |
| intron-exon | PCMTD1 | 8 | - | NCAPH2 | 22 | - |
| intron-exon | COX1 | MT | - | HLF | 17 | - |
| intron-exon | C9orf139 | 9 | + | NPDC1 | 9 | + |
| intron-exon | TRIM62 | 1 | - | AZIN2 | 1 | - |
| intron-exon | RNR2 | MT | - | SNAP25 | 20 | - |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| exon-exon | C5orf49 | 5 | - | DDHD2 | 8 | - |
| exon-exon | GAGE12E | X | + | RETREG2 | 2 | - |
| intron-exon | ND6 | MT | - | ND4 | MT | + |
| intron-exon | RP11-463D19.2 | 8 | + | UBE2W | 8 | + |
| exon-exon | CSNK1D | 17 | - | SLC16A3 | 17 | - |
| exon-exon | HNRNPA2B1 | 7 | + | MDM2 | 12 | - |
| exon-intron | ACTL9 | 19 | + | PTK2 | 8 | + |
| intron-exon | CRLF3 | 17 | - | SUZ12 | 17 | - |
| exon-exon | PPP1R14B | 11 | + | MET | 7 | - |
| exon-exon | GAPDH | 12 | - | TLN2 | 15 | - |
| intron-exon | TRNY | MT | - | SIK1B | 21 | - |
| exon-exon | CHADL | 22 | + | MAP2 | 2 | - |
| exon-exon | EMG1 | 12 | + | SLC50A1 | 1 | - |
| exon-exon | LOC105379437 | 9 | + | GPC5 | 13 | - |
| exon-exon | LRRC75A | 17 | - | SNHG29 | 17 | - |
| intron-exon | LOC105369421 | 11 | - | HIKESHI | 11 | - |
| exon-exon | GADD45G | 9 | - | NINJ1 | 9 | + |
| exon-exon | CCDC18 | 1 | + | CCDC18-AS1 | 1 | + |
| exon-exon | RFC2 | 7 | + | TBC1D20 | 20 | + |
| exon-exon | RPL38 | 17 | + | NME1-NME2 | 17 | - |
| exon-exon | NUDT1 | 7 | - | MRM2 | 7 | - |
| exon-exon | FLYWCH2 | 16 | - | ABTB1 | 3 | - |
| exon-exon | CLIC3 | 9 | - | CBX3 | 7 | - |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| exon-exon | LOC105375752 | 8 | + | CCAT1 | 8 | + |
| intron-exon | REEP5 | 5 | - | LOC100286992 | 18 | - |
| exon-exon | CPTP | 1 | - | YWHAZ | 8 | + |
| exon-exon | C11orf49 | 11 | - | CTSB | 8 | + |
| exon-exon | ATF7IP | 12 | + | PDGFRB | 5 | - |
| exon-exon | HNRNPA2B1 | 7 | - | ETV1 | 7 | - |
| intron-exon | SLC45A3 | 1 | - | ETV5 | 3 | - |
| exon-exon | EP300 | 22 | + | ZNF384 | 12 | - |
| exon-exon | PPP2R1A | 19 | - | PPP2R1A | 19 | + |
| exon-exon | APEH | 3 | + | TRAK1 | 3 | + |
| exon-exon | CRYBG3 | 3 | + | MCF2 | X | - |
| exon-exon | UGT1A6 | 2 | - | UGT1A6 | 2 | + |
| intron-exon | IGH | 14 | + | MYC | 8 | + |
| exon-exon | HPGD | 4 | - | HPGD | 4 | + |
| exon-exon | SCNN1A | 12 | - | TNFRSF1A | 12 | - |
| exon-exon | COX2 | MT | + | ND3 | MT | + |
| exon-intron | IGKV2-40 | 2 | - | IGK | 2 | - |
| exon-exon | SLC45A3 | 1 | - | ELK4 | 1 | - |
| exon-exon | SLC45A3 | 1 | - | ELK4 | 1 | - |
| exon-exon | ATP8 | MT | + | ND5 | MT | + |
| exon-exon | COX2 | MT | + | CYTB | MT | + |
| exon-exon | COX2 | MT | + | CYTB | MT | + |
| exon-exon | COX2 | MT | + | CYTB | MT | + |
| exon-exon | ATP6 | MT | + | CYTB | MT | + |
| exon-exon | ND4L | MT | + | CYTB | MT | + |
| exon-exon | COX1 | MT | + | ND5 | MT | + |
| exon-exon | COX1 | MT | + | ND5 | MT | + |
| exon-exon | COX1 | MT | + | ND5 | MT | + |
| exon-exon | COX2 | MT | + | ND5 | MT | + |
| exon-exon | COX2 | MT | + | ND5 | MT | + |
| exon-exon | ATP6 | MT | + | ND5 | MT | + |
| exon-exon | ATP6 | MT | + | ND5 | MT | + |
| exon-exon | COX3 | MT | + | ND5 | MT | + |
| exon-exon | ND3 | MT | + | ND5 | MT | + |
| exon-exon | ND4 | MT | + | ND5 | MT | + |
| exon-exon | KIF5B | 10 | - | RET | 10 | + |
| exon-exon | SDC4 | 20 | - | ROS1 | 6 | - |
| intron-exon | FGFR3 | 4 | + | TACC3 | 4 | + |
| exon-exon | FGFR3 | 4 | + | BAIAP2L1 | 7 | - |
| exon-exon | EWSR1 | 22 | + | ATF1 | 12 | + |
| exon-exon | EWSR1 | 22 | + | ATF1 | 12 | + |
| exon-exon | EWSR1 | 22 | + | FLI1 | 11 | + |
| exon-exon | CNKSR3 | 6 | - | IPCEF1 | 6 | - |
| exon-exon | UBE2L3 | 22 | + | KRAS | 12 | - |
| intron-exon | LOC108254673 | | - | SPINK14 | | + |
| exon-exon | SETDB2 | 13 | + | PHF11 | 13 | + |
| exon-exon | SETDB2 | 13 | + | PHF11 | 13 | + |
| exon-exon | SETDB2 | 13 | + | PHF11 | 13 | + |
| exon-intron | SETDB2 | 13 | + | PHF11 | 13 | + |
| exon-exon | SETDB2 | 13 | + | PHF11 | 13 | + |
| exon-exon | SETDB2 | 13 | + | PHF11 | 13 | + |
| exon-exon | SETDB2 | 13 | + | PHF11 | 13 | + |
| exon-exon | ETV6 | 12 | + | INO80D | 2 | - |
| exon-intron | IGHV3-49 | 14 | - | FAM30A | 14 | - |
| exon-intron | IGLV1-40 | 22 | + | IGL | 22 | + |
| exon-intron | TRAV16 | | + | TRA | 14 | + |
| exon-exon | KMT2A | 11 | + | LOC100131626 | 11 | - |
| exon-exon | RCC1 | 1 | + | EIF4G3 | 1 | - |
| exon-exon | EBF1 | 5 | - | PDGFRB | 5 | - |
| exon-exon | BCR | 22 | + | JAK2 | 9 | + |
| exon-exon | KMT2A | 11 | + | AFF1 | 4 | + |
| exon-exon | EWSR1 | 22 | + | ATF1 | 12 | + |
| exon-intron | IGKV4-1 | 2 | + | IGK | 2 | + |
| intron-exon | IGH | 14 | - | IGHJ1 | | - |
| exon-exon | IGHV1-58 | | - | IGHV1-46 | 14 | - |
| exon-intron | IGHV4-39 | 14 | - | IGH | 14 | - |
| exon-intron | IGHV4-59 | 14 | - | IGH | 14 | - |
| exon-exon | IGHV3-11 | | - | IGHV3-7 | 14 | - |
| exon-intron | IGHV3-7 | 14 | - | IGH | 14 | - |
| exon-intron | ETV6 | 12 | + | TAOK1 | 17 | - |
| exon-exon | EWSR1 | 22 | + | ATF1 | 12 | + |
| exon-exon | BCOR | X | - | CCNB3 | X | + |
| exon-exon | YWHAE | 17 | - | NUTM2A | 10 | + |
| exon-exon | YWHAE | 17 | - | NUTM2B | 10 | + |
| intron-exon | IGH | 14 | - | IGHV3-74 | 14 | - |
| exon-intron | BCR | 22 | + | ABL1 | 9 | + |
| intron-exon | ABL1 | 9 | + | BCR | 22 | + |
| exon-exon | DISC1FP1 | 11 | + | TSNAX-DISC1 | 1 | + |
| exon-exon | TSNAX-DISC1 | 1 | + | DISC1FP1 | 11 | + |
| exon-exon | TRAJ31 | | + | TRAC | 14 | + |
| intron-exon | LRRC37A2 | 17 | + | LRRC37A4P | 17 | - |
| exon-exon | EML4 | 2 | + | ALK | 2 | - |
| exon-exon | TRGV9 | | - | TARP | | - |
| exon-exon | SND1 | 7 | + | BRAF | 7 | - |
| exon-exon | FOXO1 | 13 | - | PAX3 | 2 | - |
| exon-intron | IGHV3-21 | 14 | - | IGH | 14 | - |
| intron-exon | FLI1 | 11 | + | EWSR1 | 22 | + |
| intron-exon | FLI1 | 11 | + | EWSR1 | 22 | + |
| intron-exon | FLI1 | 11 | + | EWSR1 | 22 | + |
| exon-intron | EWSR1 | 22 | + | FLI1 | 11 | + |
| intron-exon | FLI1 | 11 | + | EWSR1 | 22 | + |
| exon-intron | EWSR1 | 22 | + | FLI1 | 11 | + |
| exon-intron | IGKV3-20 | 2 | - | IGK | 2 | - |
| exon-exon | CDKN2A | 9 | - | FAM230G | 22 | + |
| exon-exon | IL15RA | | - | LOC105376384 | 10 | - |
| exon-exon | RUNX1 | 21 | - | RUNX1T1 | 8 | - |
| exon-exon | RUNX1 | 21 | - | RUNX1T1 | 8 | - |
| exon-exon | RUNX1 | 21 | - | RUNX1T1 | 8 | - |
| exon-exon | RUNX1 | 21 | - | RUNX1T1 | 8 | - |
| exon-exon | C4B | 6 | - | C4A | 6 | + |
| intron-exon | IGH | 14 | + | MYC | 8 | + |
| exon-exon | AIG1 | 6 | + | GOSR1 | 17 | + |
| exon-exon | UBR5 | 8 | - | ZNF423 | 16 | - |
| intron-exon | CACNG7 | 19 | + | PRKN | 6 | - |
| intron-exon | RP11-151A10.3 | 10 | - | ZNF236 | 18 | + |
| exon-exon | CCDC28A | 6 | + | IL22RA2 | 6 | - |
| intron-exon | CCDC28A | 6 | + | IL22RA2 | 6 | - |
| exon-exon | IGHV3-72 | 14 | - | IGHV3-53 | 14 | - |
| exon-exon | IGHV3-30 | 14 | - | IGHV3-7 | 14 | - |
| exon-intron | IGHV3-30 | 14 | - | IGH | 14 | - |
| exon-exon | SRSF3 | 6 | + | USP6 | 17 | + |
| intron-exon | RUNX1 | 21 | - | LOC105370972 | | - |
| exon-exon | SRGAP1 | 12 | + | PPM1H | 12 | - |
| exon-exon | HIP1 | 7 | - | ALK | 2 | - |
| exon-exon | IGHV3-30 | 14 | - | IGHV3-21 | 14 | - |
| exon-exon | REST | 4 | + | EAPP | 14 | - |
| exon-exon | TBL1XR1 | 3 | - | RARA | 17 | + |
| exon-exon | MAP3K3 | 17 | + | DDX42 | 17 | + |
| exon-exon | MAP3K3 | 17 | + | DDX42 | 17 | + |
| exon-exon | DNAJA2 | 16 | - | NETO2 | 16 | - |
| exon-exon | PLEKHD1 | 14 | + | SLC39A9 | 14 | + |
| exon-exon | PAX3 | 2 | - | MAML3 | 4 | - |
| exon-exon | PAX3 | 2 | - | MAML3 | 4 | - |
| exon-intron | IGHV3-30 | 14 | - | IGH | 14 | - |
| intron-exon | CASC8 | 8 | + | LRATD2 | 8 | + |
| exon-intron | LOC105373262 | 1 | + | CASC8 | 8 | + |
| exon-exon | IGHV3-49 | 14 | - | IGHV3-33 | 14 | - |
| exon-exon | IGHV3-48 | 14 | - | IGHV3-30 | 14 | - |
| exon-exon | IGHV3-66 | 14 | - | IGHV3-30 | 14 | - |
| exon-intron | BMS1P20 | 22 | + | IGL | 22 | + |
| exon-intron | BMS1P20 | 22 | + | IGL | 22 | + |
| exon-exon | STRN | 2 | - | ALK | 2 | - |
| exon-exon | RUNX1 | 21 | - | RUNX1T1 | 8 | - |
| exon-exon | RUNX1 | 21 | - | RUNX1T1 | 8 | - |
| exon-exon | RUNX1 | 21 | - | RUNX1T1 | 8 | - |
| exon-exon | RUNX1 | 21 | - | RUNX1T1 | 8 | - |
| exon-exon | RUNX1 | 21 | - | RUNX1T1 | 8 | - |
| exon-exon | RUNX1 | 21 | - | RUNX1T1 | 8 | - |
| exon-exon | RUNX1T1 | 8 | + | RUNX1 | 21 | + |
| exon-exon | PVT1 | 8 | + | EYA1 | 8 | - |
| exon-exon | PVT1 | 8 | + | EYA1 | 8 | - |
| intron-exon | PVT1 | 8 | + | AKT3 | 1 | - |
| exon-exon | PVT1 | 8 | + | AKT3 | 1 | - |
| exon-exon | SEC31A | 4 | - | ALK | 2 | - |
| exon-exon | CIC | 19 | + | DUX4L6 | 4 | + |
| intron-exon | KMT2A | 11 | + | FLNA | X | - |
| exon-exon | IGHV3-72 | 14 | - | IGHV1-69 | 14 | - |
| exon-exon | IGHV3-16 | 14 | - | IGHV3-11 | 14 | - |
| exon-exon | KMT2B | 19 | + | GPS2 | 17 | - |
| exon-exon | BDKRB2 | 14 | + | BDKRB1 | 14 | + |
| intron-exon | TRAV20 | 14 | + | TRAJ13 | 14 | + |
| exon-exon | TRAV23DV6 | 14 | + | TRAJ24 | | + |
| intron-exon | TRA | 14 | + | TRAC | 14 | + |
| exon-exon | TRAJ5 | | + | TRAC | 14 | + |
| exon-intron | TRBV12-4 | 7 | + | TRBJ2-7 | 7 | + |
| exon-exon | TRAV38-1 | 14 | + | TRAJ48 | 14 | + |
| exon-exon | TRAV26-1 | 14 | + | TRAJ22 | 14 | + |
| exon-exon | TRAV34 | 14 | + | TRAJ42 | 14 | + |
| exon-exon | TRAV9-2 | 14 | + | TRAJ39 | 14 | + |
| exon-intron | TRBV7-4 | | + | TRB | 7 | + |
| intron-exon | TRAV14DV4 | 14 | + | TRAJ56 | 14 | + |
| intron-exon | TRA | 14 | + | TRAC | 14 | + |
| exon-exon | TRAV12-2 | 14 | + | TRAJ57 | 14 | + |
| exon-exon | TRAV1-1 | 14 | + | TRAJ11 | 14 | + |
| exon-exon | TRAV19 | 14 | + | TRAJ23 | 14 | + |
| exon-intron | TRAV8-6 | 14 | + | TRAJ53 | 14 | + |
| exon-exon | TRAV41 | 14 | + | TRAJ31 | | + |
| exon-exon | TRAV13-1 | 14 | + | TRAJ47 | 14 | + |
| exon-exon | TRAV34 | 14 | + | TRAJ18 | 14 | + |
| intron-exon | TRA | 14 | + | TRAJ8 | 14 | + |
| exon-exon | TRAV19 | 14 | + | TRAJ53 | 14 | + |
| exon-exon | TRAV17 | 14 | + | TRAJ53 | 14 | + |
| exon-exon | TRAV13-2 | 14 | + | TRAJ21 | 14 | + |
| exon-exon | TRBJ2-7 | | + | TRBC2 | 7 | + |
| exon-intron | TRBV5-1 | | + | TRBJ2-7 | 7 | + |
| exon-exon | TRAV1-2 | 14 | + | TRAJ31 | | + |
| exon-exon | TRAV38-1 | 14 | + | TRAJ37 | 14 | + |
| exon-exon | TRAV9-2 | 14 | + | TRAJ39 | 14 | + |
| exon-exon | TRAJ36 | 14 | + | TRAC | 14 | + |
| exon-exon | TRAJ47 | 14 | + | TRAC | 14 | + |
| exon-exon | TRAV16 | | + | TRAJ52 | 14 | + |
| exon-exon | TRAV23DV6 | 14 | + | TRAJ10 | | + |
| exon-exon | TRAJ46 | | + | TRAC | 14 | + |
| exon-exon | TRAJ7 | | + | TRAC | 14 | + |
| exon-exon | TRAV2 | 14 | + | TRAJ20 | 14 | + |
| exon-exon | TRAJ56 | | + | TRAC | 14 | + |
| exon-exon | TRAV16 | | + | TRAJ10 | | + |
| exon-intron | TRAV17 | 14 | + | TRA | 14 | + |
| exon-exon | TRAV17 | 14 | + | TRAJ40 | 14 | + |
| exon-intron | TRAV20 | 14 | + | TRA | 14 | + |
| exon-intron | TRAV12-3 | 14 | + | TRA | 14 | + |
| exon-exon | TRAV12-3 | 14 | + | TRAJ9 | 14 | + |
| exon-exon | TRAV10 | | + | TRAJ32 | 14 | + |
| exon-exon | TRAJ30 | | + | TRAC | 14 | + |
| exon-exon | TRAV13-2 | 14 | + | TRAJ52 | 14 | + |
| exon-exon | TSC1 | 9 | - | PDGFRB | 5 | - |
| exon-intron | GLYCTK | 3 | + | DNAH1 | 3 | + |
| exon-exon | GLYCTK | 3 | + | DNAH1 | 3 | + |
| exon-exon | CD81 | 11 | + | TSSC4 | 11 | + |
| exon-exon | ABRAXAS1 | 4 | - | HELQ | | - |
| exon-exon | SLC12A4 | 16 | - | LCAT | 16 | - |
| exon-exon | CLTRN | X | - | ACE2 | X | - |
| exon-exon | FZD4-DT | | + | TMEM135 | 11 | + |
| exon-exon | VAMP8 | 2 | + | VAMP5 | 2 | + |
| intron-exon | FXYD6-FXYD2 | 11 | - | DSCAML1 | 11 | - |
| exon-intron | ACSM2A | | + | CTD-3076M17.1 | | + |
| exon-intron | KLK4 | 19 | - | KLKP1 | 19 | - |
| exon-exon | KLK4 | 19 | - | KLKP1 | 19 | - |
| exon-exon | KLK4 | 19 | - | KLKP1 | 19 | - |
| exon-exon | LOC107985656 | | + | RAB9A | | + |
| exon-exon | LOC107985656 | | + | RAB9A | | + |
| exon-exon | GTF2I | 7 | + | RARA | 17 | + |
| exon-exon | ZFPM2 | 8 | + | ELF5 | 11 | - |
| exon-exon | TNS3 | 7 | - | MAP3K3 | 17 | + |
| exon-exon | MAP3K3 | 17 | + | TNS3 | 7 | - |
| intron-exon | SMOC2 | 6 | + | PROX1 | 1 | + |
| exon-exon | C1QTNF1 | 17 | + | STK32C | 10 | - |
| exon-exon | GNAO1 | 16 | + | GNAQ | 9 | - |
| intron-exon | BCR | 22 | + | ABL1 | 9 | + |
| exon-exon | TRAJ40 | 14 | + | TRAC | 14 | + |
| exon-exon | SIN3A | 15 | - | RUNX1 | 21 | - |
| exon-intron | IGLV6-57 | 22 | + | IGL | 22 | + |
| exon-exon | MTAP | 9 | + | CDKN2B-AS1 | 9 | + |
| exon-exon | MTAP | 9 | + | CDKN2B-AS1 | 9 | + |
| exon-exon | MTAP | 9 | + | CDKN2B-AS1 | 9 | + |
| exon-exon | MTAP | 9 | + | CDKN2B-AS1 | 9 | + |
| exon-exon | MTAP | 9 | + | CDKN2B-AS1 | 9 | + |
| exon-exon | KMT2A | 11 | + | AFF1 | 4 | + |
| exon-exon | KMT2A | 11 | + | AFF1 | 4 | + |
| exon-exon | AFF1 | 4 | + | KMT2A | 11 | + |
| exon-exon | PPP6R3 | 11 | + | USP6 | 17 | + |
| exon-intron | ZNF208 | | - | AC123912.3 | | - |
| exon-exon | BCR | 22 | + | ABL1 | 9 | + |
| exon-exon | DHRS4L2 | 14 | + | DHRS4L1 | 14 | + |
| exon-exon | DHRS4L2 | 14 | + | DHRS4L1 | 14 | + |
| exon-exon | DHRS4L2 | 14 | + | DHRS4L1 | 14 | + |
| exon-exon | NFYA | 6 | + | ADCY10P1 | 6 | + |
| exon-exon | NR4A3 | 9 | + | PIK3R1 | 5 | + |
| exon-exon | PIK3R1 | 5 | + | NR4A3 | 9 | + |
| exon-exon | BCR | 22 | + | ABL1 | 9 | + |
| exon-exon | IGHV3-62 | | - | IGHV3-53 | 14 | - |
| exon-intron | IGHV3-30 | 14 | - | IGH | 14 | - |
| exon-exon | NUP98 | 11 | - | NSD1 | 5 | + |
| exon-exon | NUP98 | 11 | - | NSD1 | 5 | + |
| exon-exon | NUP98 | 11 | - | PHF23 | 17 | - |
| intron-exon | GCC2 | 2 | + | ALK | 2 | - |
| intron-exon | PHACTR1 | 6 | + | ALK | 2 | - |
| intron-exon | KIAA1217 | 10 | + | RET | 10 | + |
| exon-exon | TRAV13-2 | 14 | + | TRAJ20 | 14 | + |
| exon-intron | TRAV30 | 14 | + | TRA | 14 | + |
| exon-intron | TRAV12-3 | 14 | + | TRA | 14 | + |
| exon-exon | TRAV29DV5 | 14 | + | TRAJ37 | 14 | + |
| exon-exon | TRAV8-2 | 14 | - | TRAV8-4 | 14 | + |
| exon-exon | TRAV6 | 14 | + | TRAJ8 | 14 | + |
| exon-exon | TRAV25 | 14 | + | TRAJ40 | 14 | + |
| exon-exon | TRAV25 | 14 | + | TRAJ48 | 14 | + |
| exon-exon | TRAV20 | 14 | + | TRAJ45 | 14 | + |
| exon-intron | TRBV18 | 7 | + | TRBJ2-5 | 7 | + |
| exon-exon | TRAV12-1 | 14 | + | TRAJ11 | 14 | + |
| exon-exon | TRAV23DV6 | 14 | + | TRAJ12 | 14 | + |
| exon-exon | TRAV1-1 | 14 | + | TRAJ41 | 14 | + |
| exon-exon | TRAV12-1 | 14 | + | TRAJ12 | 14 | + |
| exon-exon | TRAV9-2 | 14 | + | TRAJ44 | 14 | + |
| intron-exon | TRBC1 | 7 | - | TRBV5-4 | 7 | + |
| intron-exon | TRAV21 | 14 | + | TRAJ42 | 14 | + |
| intron-exon | TRAV29DV5 | 14 | + | TRAJ11 | 14 | + |
| exon-exon | TRAV13-2 | 14 | + | TRAJ56 | 14 | + |
| exon-exon | TRAV13-1 | 14 | + | TRAJ23 | 14 | + |
| intron-exon | TRAV29DV5 | 14 | + | TRAJ57 | 14 | + |
| exon-intron | TRBV7-6 | 7 | + | TRBJ2-5 | 7 | + |
| exon-exon | TRAV23DV6 | 14 | + | TRAJ4 | 14 | + |
| exon-exon | TRAV2 | 14 | + | TRAJ37 | 14 | + |
| exon-exon | TRAV13-2 | 14 | + | TRAJ42 | 14 | + |
| exon-exon | TRAV20 | 14 | + | TRAJ40 | 14 | + |
| intron-exon | TRAV12-1 | 14 | + | TRAJ27 | 14 | + |
| exon-exon | TRAV26-1 | 14 | + | TRAJ37 | 14 | + |
| exon-exon | TRAV12-3 | 14 | + | TRAJ54 | 14 | + |
| exon-exon | TRAV12-3 | 14 | + | TRAJ23 | 14 | + |
| exon-exon | TRAV35 | 14 | + | TRAJ28 | 14 | + |
| exon-exon | TRAV26-2 | 14 | + | TRAJ48 | 14 | + |
| intron-exon | TRAV19 | 14 | + | TRAJ12 | 14 | + |
| exon-exon | TRAV13-1 | 14 | + | TRAJ9 | 14 | + |
| exon-exon | TRAV3 | 14 | + | TRAJ5 | 14 | + |
| exon-exon | TRAV34 | 14 | + | TRAJ15 | 14 | + |
| exon-exon | TRAV24 | 14 | + | TRAJ13 | 14 | + |
| exon-exon | TRAV17 | 14 | + | TRAJ6 | 14 | + |
| exon-intron | TRAJ47 | 14 | + | TRA | 14 | + |
| exon-exon | TRAV12-3 | 14 | + | TRAJ17 | 14 | + |
| exon-exon | TRAV13-2 | 14 | + | TRAJ42 | 14 | + |
| exon-exon | TRAV22 | 14 | + | TRAJ20 | 14 | + |
| intron-exon | TRAV27 | 14 | + | TRAJ18 | 14 | + |
| exon-intron | TRAV12-3 | 14 | + | TRA | 14 | + |
| intron-exon | TRAV41 | 14 | + | TRAJ52 | 14 | + |
| exon-exon | TRAV17 | 14 | + | TRAJ22 | 14 | + |
| exon-exon | TRAV9-2 | 14 | + | TRAJ15 | 14 | + |
| exon-exon | TRAV36DV7 | 14 | + | TRAJ52 | 14 | + |
| exon-exon | TRAV12-3 | 14 | + | TRAJ8 | 14 | + |
| intron-exon | TRAV19 | 14 | + | TRAJ47 | 14 | + |
| exon-exon | TRBC1 | 7 | + | TRBV11-2 | 7 | + |
| exon-exon | TRAV38-2DV8 | 14 | + | TRAJ58 | 14 | + |
| exon-intron | TRAV2 | 14 | + | TRA | 14 | + |
| exon-exon | TRAV25 | 14 | + | TRAJ32 | 14 | + |
| exon-exon | TRAV23DV6 | 14 | + | TRAJ15 | 14 | + |
| exon-exon | TRAV19 | 14 | + | TRAJ26 | 14 | + |
| exon-exon | TRAV12-3 | 14 | + | TRAJ28 | 14 | + |
| exon-exon | TRAV12-1 | 14 | + | TRAJ28 | 14 | + |
| exon-exon | TRAV8-3 | 14 | + | TRAJ6 | 14 | + |
| exon-exon | TRAV9-2 | 14 | + | TRAJ18 | 14 | + |
| exon-exon | TRAV26-1 | 14 | + | TRAJ57 | 14 | + |
| exon-exon | TRAV26-1 | 14 | + | TRAJ16 | 14 | + |
| exon-exon | TRAV38-2DV8 | 14 | + | TRAJ56 | 14 | + |
| exon-exon | TRAV20 | 14 | + | TRAJ54 | 14 | + |
| exon-exon | TRAV35 | 14 | + | TRAJ22 | 14 | + |
| exon-exon | TRAV6 | 14 | + | TRAJ13 | 14 | + |
| exon-exon | TRAV3 | 14 | + | TRAJ18 | 14 | + |
| exon-intron | TRAV9-2 | 14 | + | TRA | 14 | + |
| exon-intron | TRAV13-1 | 14 | + | TRA | 14 | + |
| intron-exon | TRAV38-1 | 14 | + | TRAJ43 | 14 | + |
| intron-exon | TRBV20-1 | 7 | + | TRBJ1-4 | 7 | + |
| exon-exon | TRAV12-3 | 14 | + | TRAJ28 | 14 | + |
| intron-exon | TRAV20 | 14 | + | TRAJ5 | 14 | + |
| exon-exon | TRAV9-2 | 14 | + | TRAJ16 | 14 | + |
| exon-intron | TRAV9-2 | 14 | + | TRA | 14 | + |
| intron-exon | TRAV17 | 14 | + | TRAJ58 | 14 | + |
| exon-intron | TRAV8-1 | 14 | + | TRA | 14 | + |
| exon-exon | TRAV9-2 | 14 | + | TRAJ23 | 14 | + |
| exon-exon | TRAV13-2 | 14 | + | TRAJ52 | 14 | + |
| exon-intron | TRAV21 | 14 | + | TRAJ26 | 14 | + |
| exon-intron | TRAV12-2 | 14 | + | TRA | 14 | + |
| exon-exon | TRAV12-2 | 14 | + | TRAJ8 | 14 | + |
| exon-exon | TRAV19 | 14 | + | TRAJ18 | 14 | + |
| intron-exon | TRAV3 | 14 | + | TRAJ12 | 14 | + |
| intron-exon | TRAV20 | 14 | + | TRAJ13 | 14 | + |
| exon-exon | TRAV38-2DV8 | 14 | + | TRAJ21 | 14 | + |
| exon-exon | IGKV1-17 | 2 | - | IGKV1-9 | | - |
| exon-intron | TP53 | 17 | - | KPNA3 | 13 | - |
| exon-exon | IGLV1-44 | 22 | + | IGLL5 | 22 | + |
| exon-exon | ZNF354B | | + | ZFP2 | | + |
| intron-exon | IGK | 2 | + | IGKV1D-33 | | + |
| intron-exon | IGK | 2 | + | IGKV1D-27 | | + |
| exon-exon | IGHV4-39 | 14 | + | IGHV4-59 | 14 | + |
| exon-exon | IGHV4-59 | 14 | + | IGHV3-71 | 14 | + |
| intron-exon | IGH | 14 | + | IGHV3-30 | 14 | + |
| exon-exon | IGHV4-4 | 14 | + | IGHV4-30-2 | 14 | + |
| intron-exon | FUS | 16 | + | ERG | 21 | - |
| intron-exon | FUS | 16 | + | ERG | 21 | - |
| exon-exon | FUS | 16 | + | ERG | 21 | - |
| exon-exon | PTPRZ1 | 7 | + | MET | 7 | + |
| exon-exon | PTPRZ1 | 7 | + | MET | 7 | + |
| exon-exon | PTPRZ1 | 7 | + | MET | 7 | + |
| exon-intron | CRYL1 | 13 | - | IFT88 | 13 | - |
| exon-exon | KMT2A | 11 | + | MAML2 | 11 | - |
| exon-exon | CCDC6 | 10 | - | PDGFRB | 5 | - |
| exon-intron | PSORS1C3 | 6 | - | CLEC4A | 12 | - |
| exon-exon | UPF2 | 10 | - | LEMD3 | | + |
| exon-exon | CAMK1D | 10 | + | ANAPC5 | 12 | - |
| exon-exon | LEMD3 | 12 | + | MKX | | - |
| exon-exon | MLLT10 | 10 | + | CCNT1 | 12 | - |
| exon-exon | HMGA2 | 12 | + | KRT87P | | - |
| exon-exon | KDM2B | 12 | - | CELF2 | 10 | + |
| exon-exon | ANKRD26 | 10 | - | NCKAP1L | 12 | + |
| exon-exon | FAM107B | 10 | - | CDNF | 10 | - |
| exon-exon | CRADD | 12 | + | LYZ | 12 | + |
| exon-exon | ITGA5 | | - | SLC9B1P3 | 10 | - |
| exon-exon | LEMD3 | 12 | + | UPF2 | 10 | - |
| exon-intron | FURIN | 15 | + | ADAMTS1 | 21 | + |
| exon-exon | SUCO | 1 | + | SLC12A7 | | - |
| exon-exon | VAMP4 | | - | TAF3 | | + |
| exon-exon | SLCO3A1 | | + | BACE2 | 21 | + |
| exon-exon | NDFIP2 | | + | MYO16-AS1 | | - |
| exon-exon | RASAL2 | 1 | + | ACVR1 | 2 | - |
| exon-exon | QKI | 6 | + | FILNC1 | | + |
| exon-intron | ARHGEF25 | 12 | + | AC025165.6 | | + |
| exon-exon | ZNF286A | 17 | + | SPA17 | 11 | + |
| exon-intron | LOC100132154 | 9 | - | IGKV1OR-2 | 9 | - |
| exon-exon | PPARD | 6 | + | MYO1D | 17 | - |
| exon-exon | MARCHF9 | 12 | + | LOC101927583 | 12 | - |
| exon-exon | SH3TC1 | 4 | + | TRIP13 | 5 | + |
| exon-exon | B4GALNT1 | | - | SLC28A3 | | - |
| exon-exon | VEZT | 12 | + | CPZ | | + |
| exon-exon | NDFIP2 | | + | MYO16-AS1 | | - |
| intron-exon | GSE1 | 16 | - | MYO16-AS1 | | - |
| intron-exon | NUP107 | 12 | - | HMCN1 | 1 | + |
| exon-intron | MARCHF9 | 12 | + | ARHGEF25 | | - |
| exon-exon | IGF1R | 15 | + | LOC101926960 | | - |
| exon-exon | LOC100507250 | | - | HMCN1 | 1 | + |
| exon-exon | PRKAR1A | 17 | + | RET | 10 | + |
| exon-exon | IGHV3-30 | 14 | - | IGHJ6 | 14 | - |
| intron-exon | LOC107987053 | | + | CACNA1C | 12 | + |
| intron-exon | THBS3-AS1 | 1 | - | MUC1 | 1 | - |
| exon-exon | IGHV3-69-1 | 14 | - | IGHV3-21 | 14 | - |
| exon-exon | MXI1 | 10 | - | MXI1 | 10 | + |
| exon-exon | SUV39H1 | X | - | SUV39H1 | X | + |
| exon-exon | PORCN | X | - | PORCN | X | + |
| exon-intron | IGKV1-27 | 2 | - | IGK | 2 | - |
| exon-exon | KLHDC3 | 6 | + | ATN1 | 12 | + |
| exon-exon | PDE7A | 8 | - | ELMOD2 | | - |
| exon-exon | TRMT1 | | + | RSU1 | 10 | - |
| intron-exon | PRKCA | 17 | + | PAFAH1B1 | 17 | + |
| exon-exon | RBM15B | 3 | - | RBM15B | 3 | + |
| intron-exon | CASK | X | + | NPR2 | 9 | + |
| exon-intron | SPAM1 | | + | LOC105375483 | | + |
| exon-exon | ITPRIPL2 | 16 | + | GGCX | 2 | - |
| exon-exon | RNA45SN1 | 21 | + | PRDX2 | 19 | - |
| exon-intron | PDE4A | 19 | + | PCBP1-AS1 | 2 | + |
| exon-intron | RUNX1 | 21 | - | MECOM | 3 | - |
| exon-exon | KMT2A | 11 | + | AFF1 | 4 | + |
| exon-exon | RNA45SN1 | 21 | - | NFE2L1 | 17 | + |
| exon-exon | PAFAH1B1 | 17 | + | ADNP | 20 | - |
| intron-exon | HSF2BP | 21 | - | UBA52 | 19 | + |
| exon-intron | BMS1P20 | 22 | + | IGL | 22 | + |
| intron-exon | CDKN1A | 6 | - | PGGT1B | | - |
| exon-intron | CBSL | 21 | - | LOC102724843 | 21 | + |
| exon-exon | RCAN1 | 21 | + | RCAN1 | 21 | - |
| exon-intron | CFAP410 | 21 | + | PDXK | 21 | + |
| exon-exon | IGLV3-25 | 22 | + | IGLL5 | 22 | + |
| exon-exon | IGLV3-10 | | + | IGLL5 | 22 | + |
| intron-exon | HNF4G | 8 | - | AFM | 4 | + |
| exon-exon | ZNF445 | 3 | - | MLLT1 | 19 | + |
| intron-exon | PBLD | 10 | - | HNRNPH3 | 10 | + |
| exon-exon | METTL22 | | + | ABAT | 16 | + |
| intron-exon | CAMK2D | 4 | - | IQGAP1 | 15 | + |
| exon-exon | TRAV13-1 | 14 | + | TRAJ28 | 14 | + |
| exon-exon | TRAV23DV6 | 14 | + | TRAJ40 | 14 | + |
| exon-intron | ZRANB2 | 1 | + | DOK7 | 4 | - |
| exon-exon | IGLV3-19 | 22 | + | IGLL5 | 22 | + |
| exon-exon | FKBP8 | 19 | + | FKBP8 | 19 | - |
| exon-exon | BCL2L2-PABPN1 | 14 | + | PSMC3IP | 17 | - |
| intron-exon | TMED8 | 14 | - | SPCS2 | 11 | + |
| intron-exon | MBD5 | 2 | + | PDK1 | 2 | + |
| exon-intron | GSS | 20 | - | DHFR | 5 | - |
| intron-exon | ANXA8 | 10 | + | EPG5 | 18 | + |
| exon-exon | SYMPK | 19 | - | MAPK6 | 15 | + |
| exon-exon | NPAS3 | 14 | - | WASHC1 | 9 | + |
| exon-exon | EWSR1 | 22 | + | FLI1 | 11 | + |
| exon-exon | FGFR2 | 10 | - | BICC1 | 10 | + |
| exon-exon | FGFR2 | 10 | - | AHCYL1 | 1 | + |
| exon-exon | ND1 | MT | + | ATP6 | MT | + |
| exon-exon | ND1 | MT | + | ND2 | MT | + |
| exon-exon | ND1 | MT | + | COX1 | MT | + |
| exon-exon | LOC112268292 | | + | VWFP1 | 22 | + |
| exon-intron | TIMP1 | X | + | SYN1 | X | + |
| exon-intron | LOC100132057 | 1 | + | LOC647481 | | + |
| exon-intron | CHRM3-AS2 | 1 | - | CHRM3 | 1 | - |
| exon-exon | LOC105378419 | 10 | - | LIPA | 10 | - |
| exon-intron | LINC02699 | | + | RP11-20J1.1 | | + |
| exon-intron | P4HA3 | | - | PPME1 | 11 | - |
| exon-exon | PRH1-PRR4 | 12 | - | LOC107984459 | | - |
| exon-exon | RACGAP1 | | - | AQP6 | 12 | - |
| intron-exon | LINC02384 | 12 | - | LOC105369819 | 12 | - |
| intron-exon | LOC102723809 | | + | HSPA2 | 14 | + |
| exon-intron | SKOR1 | | + | AC009292.2 | | + |
| exon-exon | ST8SIA2 | | + | C15orf32 | | + |
| intron-exon | USP32P3 | | + | NOS2P3 | | + |
| intron-exon | DSCAS | 18 | - | DSC2 | 18 | - |
| exon-intron | KIR2DL3 | 19 | + | KIR2DP1 | 19 | + |
| exon-intron | ZNF587B | 19 | + | ZNF587 | 19 | + |
| exon-exon | LOC105374836 | 2 | - | TRABD2A | 2 | - |
| exon-exon | MBOAT1 | 6 | + | LOC101928573 | | + |
| intron-exon | LOC110121134 | | - | LNC-LBCS | | - |
| exon-intron | LOC101927890 | 7 | + | GPNMB | 7 | + |
| exon-intron | KIAA0895 | | + | ANLN | 7 | + |
| intron-exon | CLEC5A | 7 | + | MGAM | 7 | + |
| intron-exon | AC064802.1 | | + | LOC105375710 | | + |
| intron-exon | ANKRD18A | 9 | - | FAM95C | | - |
| exon-exon | ATG3 | 3 | - | EPHB1 | 3 | + |
| exon-exon | TNIK | 3 | - | RNF123 | 3 | + |
| exon-exon | SLC12A2 | 5 | + | NRG2 | 5 | - |
| exon-exon | KIR2DL1 | 19 | + | KIR2DS4 | 19 | + |
| exon-exon | NDEL1 | 17 | + | PDGFRB | 5 | - |
| exon-exon | KIR2DL1 | 19 | + | KIR3DL2 | | + |
| intron-exon | SLC45A3 | 1 | - | ETV1 | 7 | - |
| exon-exon | ASGR1 | 17 | - | ASGR1 | 17 | + |
| exon-exon | G6PD | X | - | PRKCA | 17 | + |
| exon-exon | TRIM27 | 6 | - | RET | 10 | + |
| intron-exon | EDEM3 | 1 | + | GBA | 1 | - |
| exon-exon | HCK | | - | HCK | 20 | + |
| exon-intron | BCR | 22 | + | ABL1 | 9 | + |
| exon-exon | MYC | 8 | + | LOC105372586 | 20 | - |
| exon-exon | CLTB | 5 | + | CLTB | 5 | - |
| exon-exon | CREB3L1 | 11 | + | MUC2 | | + |
| exon-exon | ZDBF2 | | - | PSG3 | 19 | - |
| exon-exon | TRGV3 | | - | TARP | | - |
| exon-intron | TRGV2 | | - | TARP | | - |
| exon-exon | TRGV10 | | - | TARP | | - |
| exon-exon | TRGV10 | | - | TARP | | - |
| exon-exon | TRGV10 | | - | TARP | | - |
| exon-intron | CD19 | 16 | + | SPG11 | 15 | - |
| exon-exon | CCDC6 | 10 | - | RET | 10 | + |
| exon-exon | RPS27 | 1 | - | RPS24 | 10 | + |
| exon-exon | TCF3 | 19 | - | PBX1 | 1 | + |
| intron-exon | TSPOAP1-AS1 | 17 | - | MYC | 8 | + |
| exon-exon | PCYOX1 | 2 | - | CEL | 9 | + |
| intron-exon | RNF38 | 9 | - | TGM2 | 20 | - |
| intron-exon | CNOT1 | 16 | - | CSNK2A2 | 16 | - |
| exon-exon | TPM3 | 1 | - | NTRK1 | 1 | + |
| exon-exon | NCOA3 | 20 | - | RPS6KB1 | 17 | + |
| exon-exon | HSP90B1 | 12 | + | MAPK9 | 5 | - |
| exon-exon | AHNAK2 | 14 | - | AHNAK2 | 14 | + |
| exon-exon | SNPH | 20 | - | MAP1B | 5 | + |
| intron-exon | AFAP1 | 4 | - | PNN | 14 | + |
| exon-exon | ARF1 | 1 | - | PFN2 | 3 | - |
| intron-exon | CNKSR2 | X | + | FBXL16 | 16 | - |
| exon-exon | PNISR | 6 | + | NLGN1 | 3 | - |
| exon-intron | TSPYL1 | 6 | - | TPTEP2-CSNK1E | 22 | - |
| exon-exon | HIPK4 | 19 | + | MAP1A | 15 | - |
| exon-exon | TLX1NB | 10 | + | TLX1 | 10 | + |
| exon-exon | PIGR | 1 | - | CBLIF | 11 | - |
| exon-intron | OMG | | - | NF1 | 17 | - |
| exon-exon | COL14A1 | 8 | + | LOC777650 | 7 | - |
| exon-exon | RAC2 | 22 | - | STK17A | 7 | + |
| exon-exon | GNA11 | 19 | - | GNA11 | 19 | + |
| exon-exon | C1QBP | 17 | - | TRIP6 | 7 | + |
| exon-exon | ESR1 | 6 | + | RFX4 | 12 | + |
| intron-exon | RNR2 | MT | + | CSN3 | | + |
| exon-exon | PML | 15 | + | RARA | 17 | + |
| exon-exon | ADRA1D | 20 | + | ADRA1D | 20 | - |
| exon-exon | TUBB2A | 6 | - | MAP7D1 | 1 | - |
| intron-exon | STXBP6 | | + | ATP1A2 | 1 | + |
| intron-exon | AC005225.2 | 14 | - | CSNK2A1 | 20 | + |
| exon-exon | LOC107986762 | 7 | - | CALM1 | 14 | + |
| exon-intron | PACS1 | 11 | + | CDK8 | 13 | + |
| intron-exon | MACF1 | 1 | - | B4GALT2 | 1 | + |
| intron-exon | DHX30 | 3 | + | GFAP | 17 | + |
| exon-intron | PDIA3 | 15 | + | ANK3 | 10 | + |
| exon-intron | GSN | 9 | + | NSD1 | 5 | - |
| exon-exon | GSN | 9 | + | RGS11 | 16 | - |
| exon-intron | ACTB | 7 | + | PPP1R9B | 17 | - |
| exon-intron | RBFOX2 | 22 | - | MLH1 | 3 | - |
| exon-exon | RUFY3 | 4 | + | ZNF462 | 9 | - |
| exon-intron | BHLHE40 | 3 | - | FBXL17 | 5 | - |
| intron-exon | ASAP1 | 8 | + | PKD1P5-LOC105376752 | 16 | - |
| exon-intron | EPHB1 | | + | BCOR | | + |
| intron-exon | TMEM132D | 12 | - | ROBO2 | 3 | + |
| exon-intron | PHF2 | 9 | + | G6PD | X | - |
| exon-intron | TPST2 | 22 | + | LOC112268284 | 21 | - |
| exon-exon | RTN2 | 19 | - | SPTBN1 | 2 | + |
| intron-exon | CMIP | 16 | + | SNAP25 | 20 | - |
| exon-intron | VAMP2 | 17 | + | LRRC49 | | + |
| exon-intron | GNAO1 | 16 | - | FAM81A | 15 | + |
| intron-exon | PNCK | | + | NOMO1 | 16 | + |
| exon-exon | PMPCA | 9 | - | GATAD2A | 19 | - |
| intron-exon | CD247 | 1 | + | ANO5 | 11 | - |
| exon-exon | SYTL5 | | - | CPLX2 | 5 | + |
| exon-exon | DBN1 | 5 | + | SCAF8 | 6 | + |
| intron-exon | DOCK9 | 13 | + | DGAT1 | 8 | + |
| exon-exon | NCDN | 1 | - | TMSB10 | 2 | + |
| intron-exon | UBR4 | 1 | - | FAU | 11 | - |
| intron-exon | NFASC | 1 | - | ACTB | 7 | + |
| exon-exon | RARA | 17 | + | PML | 15 | + |
| exon-exon | CHM | X | + | CHM | X | - |
| exon-exon | MAPK1 | 22 | + | MAPK1 | 22 | - |
| intron-exon | PDE8B | 5 | - | TERF2IP | 16 | + |
| intron-exon | AGAP1 | 2 | + | GNAS | 20 | - |
| exon-intron | SOX11 | 2 | + | ACTL8 | 1 | - |
| exon-intron | ACVR2A | | + | PLEKHG3 | 14 | + |
| exon-intron | LRP6 | 12 | - | AL603840.1 | | + |
| exon-exon | CALY | 10 | + | EZR | 6 | - |
| exon-intron | CD81 | 11 | + | AUTS2 | 7 | - |
| intron-exon | DDX6 | 11 | + | FAM120B | | - |
| exon-intron | STMN1 | 1 | - | CSMD2 | 1 | - |
| intron-exon | PPP1R42 | 8 | - | PACS1 | 11 | - |
| exon-intron | GTF2IP1 | 7 | + | PDXDC1 | 16 | + |
| exon-exon | KIAA0753 | | - | CDS2 | 20 | + |
| exon-intron | RPLP1 | 15 | - | SZT2 | 1 | + |
| exon-exon | YBX1 | 1 | + | TROAP | 12 | - |
| exon-intron | GAD1 | 2 | - | LOC110121179 | 8 | + |
| exon-exon | SBK1 | 16 | + | UNC13A | 19 | - |
| intron-exon | IQSEC2 | | + | DNAJC6 | 1 | + |
| intron-exon | DARS1 | 2 | - | C14orf132 | 14 | + |
| exon-intron | TCIRG1 | 11 | + | PHF24 | | + |
| intron-exon | MTA3 | 2 | + | KCNMA1 | 10 | - |
| exon-exon | AGPAT1 | 6 | - | LOC107984247 | 10 | - |
| intron-exon | CSMD1 | 8 | - | UBQLN1 | 9 | - |
| exon-exon | POM121C | 7 | + | HECTD4 | 12 | - |
| intron-exon | ZNF589 | 3 | - | LOC107987135 | | - |
| exon-exon | KIF5C | 2 | + | KIF3C | 2 | - |
| exon-intron | PAX6 | 11 | - | CTNNA1 | 5 | + |
| intron-exon | MGAT5 | 2 | + | MRPL14 | 6 | - |
| exon-intron | MFSD14A | 1 | + | CNTNAP2 | 7 | - |
| exon-intron | TBL1X | X | - | GPHN | 14 | + |
| exon-exon | HEPACAM | 11 | - | TERF2IP | 16 | - |
| intron-exon | NFIA | 1 | + | MBP | 18 | + |
| intron-exon | DCP1A | | + | TTK | | + |
| exon-intron | FGFR2 | 10 | - | LOC101927556 | 16 | + |
| intron-exon | SNRNP48 | 6 | + | SMARCA1 | X | - |
| exon-exon | DTD1 | 20 | + | FKBP3 | 14 | - |
| exon-exon | TRAV9-2 | 14 | + | TRAJ12 | 14 | + |
| exon-exon | TRAV16 | | + | TRAJ53 | 14 | + |
| exon-exon | FKBP3 | 14 | - | PIP5K1C | 19 | + |
| exon-intron | COL16A1 | | - | PEF1-AS1 | | - |
| exon-exon | DNAJA4 | 15 | + | FOXK2 | 17 | + |
| exon-exon | ACTN1 | 14 | - | SERPINE1 | 7 | + |
| exon-exon | ATP2B1 | 12 | + | ATP2B1 | 12 | - |
| exon-intron | PRRX1 | 1 | + | SFXN3 | 10 | + |
| exon-exon | TRAV23DV6 | 14 | + | TRAJ36 | 14 | + |
| exon-intron | TRAV22 | 14 | + | TRA | 14 | + |
| intron-exon | RNF38 | 9 | - | TGM2 | 20 | - |
| exon-exon | TMPRSS2 | 21 | - | ETV5 | 3 | - |
| intron-exon | AC012213.5 | 8 | - | GSDMC | 8 | - |
| intron-exon | PVT1 | 8 | + | SPRY2 | 13 | - |
| exon-exon | PVT1 | 8 | + | NSMCE2 | 8 | + |
| exon-intron | MDM2 | 12 | + | PVT1 | 8 | + |
| exon-intron | MDM2 | 12 | + | PVT1 | 8 | + |
| exon-exon | H2BC5 | 6 | + | PVT1 | 8 | + |
| exon-intron | NSMCE2 | 8 | + | PVT1 | 8 | + |
| exon-exon | NSMCE2 | 8 | + | PVT1 | 8 | + |
| exon-exon | CXCR4 | 2 | - | PVT1 | 8 | + |
| exon-exon | MTSS1 | 8 | - | CYRIB | 8 | - |
| exon-exon | CYRIB | 8 | - | JPH1 | 8 | - |
| exon-exon | CYRIB | 8 | - | MTSS1 | 8 | - |
| exon-exon | PVT1 | 8 | + | LINC00824 | 8 | - |
| exon-exon | LOC105375751 | 8 | + | PVT1 | 8 | + |
| exon-exon | MYC | 8 | + | IGLJ2 | 22 | + |
| exon-exon | TMEM154 | 4 | - | RASGRF1 | 15 | - |
| exon-exon | TRAJ13 | 14 | + | TRAC | 14 | + |
| intron-exon | HLA-B | 6 | - | HLA-C | 6 | - |
| intron-exon | HLA-B | 6 | - | HLA-C | 6 | - |
| exon-exon | NAP1L4 | 11 | - | NUTM1 | 15 | + |
| exon-exon | BCR | 22 | + | ABL1 | 9 | + |
| exon-intron | TRBV3-1 | | + | TRBJ2-5 | 7 | + |
| exon-intron | TRBV20-1 | 7 | + | TRBJ1-2 | | + |
| exon-intron | TRBV20-1 | 7 | + | TRBJ2-5 | 7 | + |
| exon-exon | CPSF6 | 12 | + | RARG | 12 | - |
| exon-exon | TRAV13-1 | 14 | + | TRAJ48 | 14 | + |
| exon-exon | TRAV34 | 14 | + | TRAJ28 | 14 | + |
| exon-exon | TRAV17 | 14 | + | TRAJ39 | 14 | + |
| exon-exon | TRAV17 | 14 | + | TRAJ53 | 14 | + |
| exon-exon | TRAV41 | 14 | + | TRAJ49 | | + |
| exon-exon | TRAV29DV5 | 14 | + | TRAJ6 | 14 | + |
| exon-intron | TRAV20 | 14 | + | TRA | 14 | + |
| exon-exon | TRAV21 | 14 | + | TRAJ26 | 14 | + |
| exon-exon | TRAV17 | 14 | + | TRAJ52 | 14 | + |
| exon-exon | TRAV14DV4 | 14 | + | TRAJ26 | 14 | + |
| exon-exon | TRAV30 | 14 | + | TRAJ20 | 14 | + |
| exon-exon | TRAV13-2 | 14 | + | TRAJ44 | 14 | + |
| exon-exon | TRAV19 | 14 | + | TRAJ10 | | + |
| intron-exon | TRA | 14 | + | TRAJ21 | 14 | + |
| exon-exon | TRAV26-1 | 14 | + | TRAJ45 | 14 | + |
| exon-intron | TRAV35 | 14 | + | TRA | 14 | + |
| exon-exon | TRAV29DV5 | 14 | + | TRAJ13 | 14 | + |
| exon-exon | TRAV1-1 | 14 | + | TRAJ45 | 14 | + |
| exon-intron | TRAV25 | 14 | + | TRA | 14 | + |
| exon-exon | TRAV21 | 14 | + | TRAJ39 | 14 | + |
| exon-exon | TRAV9-2 | 14 | + | TRAJ26 | 14 | + |
| intron-exon | TRAV5 | | + | TRAJ39 | 14 | + |
| exon-exon | TRAV38-1 | 14 | + | TRAJ54 | 14 | + |
| exon-exon | TRAV13-1 | 14 | + | TRAJ24 | | + |
| intron-exon | TRA | 14 | + | TRAJ4 | 14 | + |
| exon-exon | TRAV35 | 14 | + | TRAJ53 | 14 | + |
| exon-exon | TRAV30 | 14 | + | TRAJ57 | 14 | + |
| exon-intron | TRAV1-2 | 14 | + | TRA | 14 | + |
| exon-exon | TRAV2 | 14 | + | TRAJ21 | 14 | + |
| exon-exon | TRAV6 | 14 | + | TRAJ21 | 14 | + |
| exon-intron | TRAV19 | 14 | + | TRA | 14 | + |
| exon-intron | TRAV12-2 | 14 | + | TRA | 14 | + |
| exon-intron | TRAV20 | 14 | + | TRAJ8 | 14 | + |
| exon-intron | TRAV38-2DV8 | 14 | + | TRA | 14 | + |
| exon-exon | TRAV1-2 | 14 | + | TRAJ33 | 14 | + |
| intron-exon | TRAV38-1 | 14 | + | TRAJ28 | 14 | + |
| exon-exon | TRAV13-1 | 14 | + | TRAJ40 | 14 | + |
| exon-exon | TRAV26-1 | 14 | + | TRAJ26 | 14 | + |
| exon-exon | TRAV19 | 14 | + | TRAJ54 | 14 | + |
| exon-exon | TRAV2 | 14 | + | TRAJ42 | 14 | + |
| exon-exon | TRAV13-2 | 14 | + | TRAJ44 | 14 | + |
| exon-exon | TRAV36DV7 | 14 | + | TRAJ54 | 14 | + |
| exon-exon | TRAV1-1 | 14 | + | TRAJ33 | 14 | + |
| exon-exon | TRAV21 | 14 | + | TRAJ45 | 14 | + |
| exon-intron | TRAV23DV6 | 14 | + | TRA | 14 | + |
| exon-exon | TRAV13-1 | 14 | + | TRAJ18 | 14 | + |
| intron-exon | TRAV3 | 14 | + | TRAJ20 | 14 | + |
| exon-exon | TRAV6 | 14 | + | TRAJ39 | 14 | + |
| exon-exon | TRAV20 | 14 | + | TRAJ42 | 14 | + |
| exon-exon | TRAV19 | 14 | + | TRAJ28 | 14 | + |
| exon-exon | TRAV12-3 | 14 | + | TRAJ11 | 14 | + |
| exon-exon | TRAV2 | 14 | + | TRAJ16 | 14 | + |
| exon-exon | TRAV26-1 | 14 | + | TRAJ52 | 14 | + |
| exon-exon | TRAV13-1 | 14 | + | TRAJ28 | 14 | + |
| exon-exon | TRAV4 | 14 | + | TRAJ9 | 14 | + |
| exon-intron | TRAV25 | 14 | + | TRA | 14 | + |
| exon-exon | TRAV14DV4 | 14 | + | TRAJ28 | 14 | + |
| exon-exon | TRAV12-2 | 14 | + | TRAJ45 | 14 | + |
| exon-exon | TRAV13-2 | 14 | + | TRAJ39 | 14 | + |
| intron-exon | TRAV20 | 14 | + | TRAJ43 | 14 | + |
| exon-exon | TRAV1-1 | 14 | + | TRAJ9 | 14 | + |
| exon-exon | TRAV13-1 | 14 | + | TRAJ49 | | + |
| exon-exon | TRAV5 | | + | TRAJ4 | 14 | + |
| exon-exon | TRAV19 | 14 | + | TRAJ40 | 14 | + |
| intron-exon | TRA | 14 | + | TRAJ36 | 14 | + |
| exon-exon | TRAV6 | 14 | + | TRAJ36 | 14 | + |
| exon-exon | TRAV3 | 14 | + | TRAJ9 | 14 | + |
| exon-exon | TRAV13-1 | 14 | + | TRAJ48 | 14 | + |
| exon-exon | TRAV13-1 | 14 | + | TRAJ50 | | + |
| exon-exon | TRAV21 | 14 | + | TRAJ49 | | + |
| intron-exon | TRAV39 | | + | TRAJ54 | 14 | + |
| exon-intron | TRAV41 | 14 | + | TRA | 14 | + |
| intron-exon | TRBV4-2 | | + | TRBJ2-6 | | + |
| exon-exon | TRAV4 | 14 | + | TRAJ18 | 14 | + |
| intron-exon | TRAV25 | 14 | + | TRAJ45 | 14 | + |
| exon-exon | TRAV1-2 | 14 | + | TRAJ13 | 14 | + |
| exon-intron | TRAV38-1 | 14 | + | TRA | 14 | + |
| exon-exon | TRAV6 | 14 | + | TRAJ9 | 14 | + |
| exon-exon | TRAV26-1 | 14 | + | TRAJ53 | 14 | + |
| exon-intron | TRAV1-2 | 14 | + | TRA | 14 | + |
| exon-exon | TRAV21 | 14 | + | TRAJ4 | 14 | + |
| intron-exon | TRAV25 | 14 | + | TRAJ34 | | + |
| exon-exon | TRAV23DV6 | 14 | + | TRAJ45 | 14 | + |
| exon-exon | TRAV1-2 | 14 | + | TRAJ35 | | + |
| exon-exon | TRAV1-2 | 14 | + | TRAJ18 | 14 | + |
| exon-exon | TRAV2 | 14 | + | TRAJ33 | 14 | + |
| exon-exon | TRAV1-2 | 14 | + | TRAJ12 | 14 | + |
| exon-exon | TRAV22 | 14 | + | TRAJ26 | 14 | + |
| exon-exon | TRAV17 | 14 | + | TRAJ23 | 14 | + |
| exon-exon | TRAV13-2 | 14 | + | TRAJ28 | 14 | + |
| exon-intron | TRAV12-3 | 14 | + | TRA | 14 | + |
| exon-exon | TRAV4 | 14 | + | TRAJ32 | 14 | + |
| exon-intron | TRAV38-1 | 14 | + | TRA | 14 | + |
| exon-intron | TRAV1-2 | 14 | + | TRA | 14 | + |
| exon-exon | TRAV36DV7 | 14 | + | TRAJ13 | 14 | + |
| exon-exon | TRAV1-2 | 14 | + | TRAJ33 | 14 | + |
| exon-exon | TRAV19 | 14 | + | TRAJ11 | 14 | + |
| exon-exon | TRAV19 | 14 | + | TRAJ10 | | + |
| exon-exon | TRAV14DV4 | 14 | + | TRAJ9 | 14 | + |
| exon-exon | TRAV17 | 14 | + | TRAJ56 | 14 | + |
| exon-exon | TRAV8-6 | 14 | + | TRAJ52 | 14 | + |
| exon-exon | TRAV25 | 14 | + | TRAJ57 | 14 | + |
| exon-exon | TRAV16 | | + | TRAJ57 | 14 | + |
| exon-exon | TRAV29DV5 | 14 | + | TRAJ49 | | + |
| exon-exon | TRAV26-2 | 14 | + | TRAJ37 | 14 | + |
| exon-exon | TRAV27 | 14 | + | TRAJ53 | 14 | + |
| exon-exon | TRAV9-2 | 14 | + | TRAJ53 | 14 | + |
| exon-exon | TRAV24 | 14 | + | TRAJ37 | 14 | + |
| intron-exon | TRAV17 | 14 | + | TRAJ21 | 14 | + |
| intron-exon | TRAV13-2 | 14 | + | TRAJ16 | 14 | + |
| exon-exon | TRAV9-2 | 14 | + | TRAJ37 | 14 | + |
| exon-exon | TRAV5 | | + | TRAJ30 | | + |
| exon-exon | TRAV25 | 14 | + | TRAJ20 | 14 | + |
| exon-exon | TRAV12-2 | 14 | + | TRAJ22 | 14 | + |
| intron-exon | TRAV20 | 14 | + | TRAJ53 | 14 | + |
| intron-exon | TRAV14DV4 | 14 | + | TRAJ8 | 14 | + |
| intron-exon | IGL | 22 | + | IGLL5 | 22 | + |
| exon-exon | UBA2 | 19 | + | WTIP | 19 | + |
| exon-exon | KMT2A | 11 | + | USP10 | 16 | + |
| intron-exon | HLA-B | 6 | - | HLA-C | 6 | - |
| exon-exon | NEBL | 10 | - | KMT2A | 11 | + |
| exon-exon | KMT2A | 11 | + | AFF1 | 4 | + |
| exon-exon | BCR | 22 | + | ABL1 | 9 | + |
| exon-exon | RUNX1 | 21 | - | RUNX1T1 | 8 | - |
| exon-exon | ETV6 | 12 | + | RUNX1 | 21 | - |
| exon-exon | CBFB | 16 | + | MYH11 | 16 | - |
| exon-intron | SMN1 | 5 | + | GTF2H2 | 5 | + |
| exon-intron | SMN1 | 5 | + | GTF2H2 | 5 | + |
| exon-exon | ARHGAP11B | 15 | + | LOC100288637 | 15 | + |
| exon-intron | STAG3L2 | 7 | - | LOC106029312 | | - |
| exon-intron | TRBV12-4 | 7 | + | TRB | 7 | + |
| exon-exon | IGLV3-1 | 22 | + | IGLL5 | 22 | + |
| intron-exon | IGL | 22 | + | IGLL5 | 22 | + |
| exon-exon | SMN2 | 5 | + | SMN1 | 5 | + |
| exon-intron | IGKV1-39 | 2 | - | IGK | 2 | - |
| exon-intron | IGKV3-20 | 2 | - | IGK | 2 | - |
| exon-exon | IGHV3-21 | 14 | - | IGHV3-11 | 14 | - |
| exon-exon | IGHG1 | 14 | - | IGHV5-10-1 | 14 | - |
| exon-exon | IGHJ6 | 14 | - | IGHA1 | 14 | - |
| exon-intron | IGHV3-30 | 14 | - | IGH | 14 | - |
| exon-exon | IGHV3-21 | 14 | - | IGHV3-11 | 14 | - |
| exon-exon | IGHV3-30 | 14 | - | IGHV3-64D | 14 | - |
| exon-intron | IGKV3-20 | 2 | - | IGK | 2 | - |
| exon-intron | IGKV3-20 | 2 | - | IGK | 2 | - |
| exon-intron | IGKV3-15 | 2 | - | IGK | 2 | - |
| exon-exon | IGHV3-53 | 14 | - | IGHV3-33 | 14 | - |
| exon-exon | IGLV2-14 | 22 | + | IGLL5 | 22 | + |
| exon-exon | IGHV4-55 | 14 | - | IGHV4-39 | 14 | - |
| exon-exon | IGHV3-33 | 14 | - | IGHV3-7 | 14 | - |
| exon-exon | IGHV3-21 | 14 | - | IGHV3-11 | 14 | - |
| exon-intron | IGHV3-30 | 14 | - | IGH | 14 | - |
| intron-exon | IGH | 14 | - | IGHJ3 | 14 | - |
| exon-intron | IGHV1-2 | 14 | - | IGH | 14 | - |
| intron-exon | KMT2A | 11 | + | MLLT3 | 9 | - |
| exon-exon | KMT2A | 11 | + | SEPTIN9 | 17 | + |
| exon-exon | KMT2A | 11 | + | ELL | 19 | - |
| exon-exon | KMT2A | 11 | + | USP2 | 11 | - |
| exon-exon | KMT2A | 11 | + | GAS7 | 17 | - |
| exon-exon | KMT2A | 11 | + | BTK | X | - |
| exon-intron | IGKV3-15 | 2 | - | IGK | 2 | - |
| exon-exon | IGHV3-33 | 14 | - | IGHV3-16 | 14 | - |
| exon-intron | IGHV4-59 | 14 | - | IGH | 14 | - |
| exon-exon | TRAF1 | 9 | - | ALK | 2 | - |
| exon-intron | IGKV3-15 | 2 | - | IGK | 2 | - |
| intron-exon | POLR2F | 22 | + | EWSR1 | 22 | - |
| intron-exon | LOC105376392 | 10 | - | LCOR | 10 | - |
| intron-exon | PPP1R12B | 1 | + | LARP4B | 10 | + |
| exon-exon | PEX1 | 7 | + | PEX1 | 7 | - |
| exon-intron | SERINC1 | 6 | + | AC018816.1 | | + |
| intron-exon | SNRK | | - | RND2 | 17 | + |
| exon-exon | GUSBP9 | 5 | - | WAPL | 10 | - |
| exon-intron | MCM4 | 8 | - | LOC106903146 | | - |
| exon-exon | DEGS2 | 14 | - | EVL | 14 | - |
| exon-intron | ZNF79 | 9 | - | TWSG1 | | - |
| exon-exon | ABRAXAS1 | 4 | - | MRPS18C | 4 | - |
| exon-exon | NFAT5 | 16 | - | NFAT5 | 16 | + |
| intron-exon | DLGAP1 | 18 | + | DLGAP1-AS1 | 18 | + |
| intron-exon | BORCS7-ASMT | 10 | + | CCL28 | 5 | - |
| exon-intron | NMD3 | 3 | + | STX8 | 17 | - |
| intron-exon | BOLA2B | 16 | - | SMG1P2 | 16 | - |
| intron-exon | LOC107985803 | | + | LOC107985944 | | + |
| exon-exon | ITGAV | 2 | + | H3P6 | 2 | + |
| exon-exon | USP11 | X | + | SAV1 | 14 | - |
| exon-intron | METTL1 | 12 | - | TGFBRAP1 | 2 | - |
| exon-exon | SECISBP2 | 9 | - | PIK3CD | 1 | - |
| exon-intron | SERINC4 | 15 | - | SERF2-C15ORF63 | 15 | + |
| exon-exon | GAPDH | 12 | - | SLC66A3 | | - |
| exon-exon | PIAS4 | 19 | + | NID2 | 14 | - |
| exon-intron | HBG1 | 11 | + | LOC106099064 | | + |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | NUDT3 | 6 | + | RPS10-NUDT3 | 6 | + |
| exon-intron | RPS24 | 10 | - | C1QTNF7-AS1 | 4 | - |
| exon-intron | HBG1 | 11 | + | LOC106099064 | | + |
| exon-exon | PCMTD1 | 8 | - | FDFT1 | 8 | + |
| exon-exon | RPL7P1 | | + | RPL13A | 19 | + |
| exon-exon | RPL4 | 15 | + | RAP1B | 12 | - |
| exon-exon | RPL13A | 19 | - | SERPING1 | 11 | - |
| exon-exon | RPLP2 | 11 | - | PLCG1 | 20 | - |
| exon-intron | RNU6-9 | 19 | + | DNAJC9 | 10 | - |
| exon-exon | NDUFB10 | 16 | - | SERPINF1 | 17 | - |
| exon-exon | CALR | 19 | - | CALR | 19 | + |
| exon-exon | EVC | 4 | + | P2RX7 | 12 | + |
| exon-exon | RPN2 | 20 | + | DIABLO | | - |
| exon-intron | LOC105378179 | 14 | - | SKA1 | | - |
| exon-exon | GINS1 | 20 | + | SERINC1 | 6 | - |
| exon-exon | OPTN | 10 | + | GNS | 12 | - |
| exon-intron | LOC100129935 | | + | LGALS16 | | + |
| exon-intron | FGFRL1 | | - | FBXL7 | 5 | + |
| exon-intron | EMC10 | 19 | + | JCAD | 10 | - |
| exon-exon | RPL26 | 17 | + | SFPQ | 1 | + |
| exon-exon | MCAM | 11 | - | C1D | 2 | - |
| exon-intron | RNU6-1 | 15 | - | IK | 5 | + |
| exon-exon | CANX | 5 | + | MLIP | 6 | + |
| exon-exon | NUDT2 | 9 | - | NUDT2 | 9 | + |
| exon-exon | SLC25A4 | 4 | + | POGZ | 1 | - |
| exon-exon | DNAAF4-CCPG1 | 15 | - | PIGB | 15 | - |
| exon-intron | ALDH4A1 | 1 | + | LOC105371082 | 16 | + |
| exon-exon | FAM177A1 | 14 | - | FAM177A1 | 14 | + |
| exon-exon | SHISA8 | 22 | - | SREBF2 | 22 | - |
| intron-exon | LOC105371664 | 1 | - | RGS1 | 1 | + |
| exon-exon | NDUFS2 | 1 | - | RNF167 | 17 | + |
| exon-intron | PTCHD1 | | - | CCDC30 | | + |
| intron-exon | HSBP1L1 | | + | TXNL4A | 18 | + |
| exon-intron | LOC105377621 | 4 | + | LINC00407 | | - |
| exon-intron | HBG2 | 11 | + | LOC106099065 | 11 | + |
| exon-intron | HBG1 | 11 | + | LOC106099064 | | + |
| exon-intron | RPL41 | 12 | - | ZBTB20 | 3 | + |
| intron-exon | EPB41L2 | 6 | - | SMLR1 | | - |
| exon-intron | DNMBP | 10 | + | CNOT4 | 7 | - |
| exon-exon | LOC105372426 | 19 | - | PPP5C | 19 | - |
| exon-intron | EIF4A3 | | + | LOC105376363 | 10 | - |
| exon-exon | PCDH17 | 13 | - | PCDH17 | 13 | + |
| intron-exon | NEK1 | 4 | - | APPL1 | 3 | + |
| exon-exon | RPS24 | 10 | - | SETSIP | | + |
| intron-exon | LINC00937 | 12 | - | SLC2A3 | 12 | - |
| exon-intron | TRIM16L | 17 | + | PHLPP1 | | + |
| exon-exon | UBLCP1 | 5 | - | INS-IGF2 | 11 | + |
| exon-exon | APOA1 | 11 | + | APOA1-AS | 11 | + |
| exon-exon | FUZ | 19 | - | AP2A1 | 19 | - |
| exon-exon | CMC4 | X | + | MTCP1 | X | + |
| intron-exon | ATP5F1A | 18 | - | EFCAB2 | 1 | - |
| intron-exon | POU2F1 | 1 | - | MKRN1 | 7 | + |
| exon-exon | PHYHIPL | 10 | + | FAM13C | 10 | - |
| intron-exon | LOC105372649 | 20 | + | PCNX4 | 14 | - |
| intron-exon | LOC105370041 | 12 | - | DDX55 | 12 | - |
| exon-exon | HSP90B1 | 12 | - | HSP90B1 | 12 | + |
| exon-exon | VASH1 | 14 | + | ANGEL1 | 14 | + |
| exon-exon | NPM1 | 5 | - | NPM1 | 5 | + |
| intron-exon | PGAM1P5 | 12 | + | NTN4 | 12 | - |
| exon-exon | FBXO9 | 6 | - | FBXO9 | 6 | + |
| exon-exon | FADS1 | 11 | + | VGLL3 | 3 | + |
| exon-exon | SGTB | | - | TRAPPC13 | 5 | - |
| intron-exon | LOC107985139 | 18 | + | ZNF24 | 18 | - |
| exon-exon | RPS23 | 5 | + | RPS23 | 5 | - |
| exon-intron | H6PD | 1 | - | RERE | 1 | + |
| intron-exon | RNF6 | | - | LOC102723493 | | + |
| exon-exon | INS-IGF2 | 11 | + | PLCB2 | 15 | + |
| exon-exon | PABPC1 | 8 | - | PABPC1P4 | 12 | - |
| exon-intron | SYNPO2L | | + | NRXN3 | 14 | + |
| intron-exon | CASC19 | | - | F2R | 5 | - |
| exon-exon | SDHB | 1 | + | SDHB | 1 | - |
| exon-exon | CDKN2AIPNL | 5 | + | ZNF217 | 20 | + |
| exon-exon | ARHGDIA | 17 | + | MYH3 | 17 | + |
| intron-exon | MGC32805 | 5 | - | SNCAIP | 5 | + |
| exon-intron | MT1G | 16 | + | RHCE | | + |
| exon-exon | NPNT | 4 | - | NPNT | 4 | + |
| exon-intron | FGFBP3 | 10 | + | LOC111982880 | | + |
| exon-exon | MCC | 5 | + | DVL3 | 3 | - |
| intron-exon | KCNT2 | | - | AGXT | | + |
| exon-intron | NBPF20 | | + | USP32 | 17 | - |
| exon-exon | LOC101928236 | 3 | + | PWWP2B | 10 | + |
| exon-exon | RPS23P8 | X | - | RPS23P8 | X | + |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-exon | NAP1L1 | 12 | + | NAP1L1 | 12 | - |
| intron-exon | BMP2K | | + | SLC43A3 | 11 | - |
| exon-intron | SZT2 | 1 | + | PLAGL1 | 6 | - |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-exon | MTCH2 | 11 | - | SERPINF1 | 17 | + |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| intron-exon | INPP4B | 4 | - | NAPA | 19 | - |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| intron-exon | HBD | 11 | - | HBBP1 | 11 | - |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-exon | POLR2G | | - | PSMC5 | 17 | - |
| exon-intron | RPL10 | X | - | RPS3 | 11 | - |
| exon-intron | SLIRP | 14 | - | SEC14L1 | 17 | - |
| exon-intron | PLGLB2 | 2 | + | RGPD1 | 2 | - |
| exon-exon | MYG1-AS1 | 12 | - | PFDN5 | 12 | - |
| exon-exon | KXD1 | 19 | + | MYH7 | 14 | - |
| intron-exon | AKAP13 | 15 | + | ZFYVE1 | 14 | + |
| exon-exon | HLA-B | 6 | - | HLA-C | 6 | - |
| exon-exon | FAM20B | 1 | - | FAM20B | 1 | + |
| exon-exon | DCAF8 | 1 | - | PWP1 | 12 | + |
| exon-exon | YTHDC1 | 4 | + | YTHDC1 | 4 | - |
| exon-exon | RNA45SN1 | 21 | + | ATOX1 | 5 | - |
| exon-exon | GAS8 | 16 | + | PLN | 6 | + |
| exon-exon | NCBP1 | 9 | - | TSTD2 | 9 | - |
| exon-exon | BIVM-ERCC5 | 13 | + | RBM26 | 13 | - |
| exon-intron | FUS | 16 | + | ANKRD20A5P | | + |
| exon-intron | RNA45SN1 | 21 | + | DCTN4 | 5 | - |
| exon-intron | FBXL7 | 5 | + | ZNF644 | 1 | - |
| intron-exon | CHCHD3 | 7 | - | EEF1G | 11 | - |
| exon-exon | FAM166A | 9 | - | TUBB4B | 9 | - |
| intron-exon | LOC105369388 | 11 | - | SLCO2B1 | 11 | - |
| exon-exon | LOC112268123 | 14 | - | LOC105370447 | 14 | - |
| intron-exon | ITFG1 | 16 | + | MTPAP | 10 | + |
| exon-exon | TSPYL2 | X | - | USP20 | 9 | - |
| exon-exon | IGLV5-45 | 22 | + | IGLL5 | 22 | + |
| exon-exon | H3-3B | 17 | + | RNA45SN1 | 21 | - |
| exon-exon | PRICKLE3 | X | - | PLP2 | X | - |
| intron-exon | C22orf23 | 22 | - | MICALL1 | 22 | - |
| exon-exon | ARFGAP2 | 11 | + | PACSIN3 | | + |
| exon-exon | CEMIP2 | 9 | + | CEMIP2 | 9 | - |
| exon-exon | PSMG3-AS1 | | - | TAB3 | | + |
| exon-exon | MYH3 | 17 | + | EDRF1 | 10 | - |
| exon-exon | EEF2 | 19 | + | F10 | 13 | - |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-intron | TBX3 | 12 | + | LOC105370000 | 12 | + |
| exon-intron | LOC105378419 | 10 | - | LIPA | 10 | - |
| exon-exon | CHGA | 14 | - | HGSNAT | 8 | - |
| intron-exon | MYO9B | 19 | - | PTMAP2 | 5 | + |
| exon-exon | LY6E | 8 | - | LY6E | 8 | + |
| exon-exon | ST6GALNAC4 | 9 | - | BUD23 | 7 | + |
| exon-exon | KCNAB3 | | + | MYO15B | 17 | - |
| exon-exon | BACH2 | 6 | - | F13A1 | 6 | + |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| intron-exon | DNHD1 | | + | TTR | 18 | + |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-intron | TPM4 | 19 | + | C11orf80 | 11 | + |
| intron-exon | UBXN10 | 1 | - | PLA2G2C | 1 | - |
| intron-exon | LOC101926967 | 17 | - | ATXN7L3 | 17 | - |
| intron-exon | LOC643327 | 6 | - | SLC22A23 | 6 | - |
| exon-intron | FAM13A | 4 | + | TIGD2 | 4 | + |
| intron-exon | PHF20L1 | 8 | - | TMEM71 | 8 | - |
| exon-intron | CCDC32 | 15 | - | AC091045.1 | 15 | - |
| exon-intron | GTF2IP1 | 7 | + | SPDYE14 | 7 | + |
| exon-intron | GTF2IP1 | 7 | + | SPDYE14 | 7 | + |
| exon-exon | STIM1-AS1 | 11 | + | STIM1 | 11 | + |
| exon-exon | STIM1-AS1 | 11 | + | STIM1 | 11 | + |
| intron-exon | STIM1-AS1 | 11 | + | STIM1 | 11 | + |
| intron-exon | LOC101928844 | 19 | - | FUT3 | 19 | - |
| exon-exon | LOC105373166 | 1 | - | AGT | 1 | - |
| intron-exon | BX649632.1 | 9 | + | WDR5 | 9 | + |
| exon-exon | HMGN2P24 | | + | RPL37 | 5 | + |
| exon-exon | ECE1 | 1 | + | PTPN23 | 3 | - |
| exon-exon | NFE2 | | + | RPL4 | 15 | + |
| exon-intron | TRAPPC10 | 21 | - | GCNT2 | 6 | - |
| exon-intron | CGA | 6 | + | CDC42BPB | 14 | + |
| intron-exon | GC | 4 | - | CUX1 | 7 | + |
| intron-exon | AC007000.3 | 7 | - | SPDYE18 | | - |
| exon-exon | CYP11A1 | 15 | - | SIAH1 | 16 | + |
| intron-exon | DSCAM | 21 | - | DCAF7 | 17 | + |
| exon-exon | LRP5 | 11 | - | LRP5 | 11 | + |
| exon-intron | AADAT | 4 | + | LOC107986326 | 4 | + |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| exon-exon | LONP1 | 19 | - | RPL36 | 19 | - |
| exon-exon | HBA1 | 16 | + | PEG10 | 7 | + |
| exon-intron | NOL8 | 9 | - | SPTB | 14 | + |
| intron-exon | GSK3B | 3 | - | SGIP1 | 1 | + |
| exon-exon | LOC100133286 | 21 | + | CBR1 | 21 | + |
| intron-exon | MCMBP | | - | MAP3K12 | 12 | - |
| exon-exon | EEF2 | 19 | + | CCDC6 | 10 | - |
| intron-exon | LOC101927243 | | - | GSAP | 7 | - |
| intron-exon | NKAIN2 | 6 | + | HNRNPA0 | 5 | - |
| intron-exon | IPO9-AS1 | 1 | - | NAV1 | 1 | + |
| intron-exon | AUTS2 | 7 | + | DYNLL1 | 12 | + |
| exon-intron | LOC105372760 | 21 | + | ADAMTS5 | 21 | + |
| exon-intron | NUDT4 | 12 | + | NRG1 | 8 | + |
| exon-exon | LYL1 | 19 | - | NFIX | 19 | - |
| exon-exon | SHC1 | 1 | + | SHC1 | 1 | - |
| exon-intron | PPDPF | 20 | - | LOC105378026 | | - |
| exon-exon | UNC13D | 17 | + | PAPPA-AS1 | 9 | - |
| intron-exon | RNF216P1 | 7 | + | CGB8 | | - |
| intron-exon | PARD3 | 10 | - | CLDN1 | 3 | - |
| intron-exon | AHCYL2 | 7 | - | NME2P1 | 12 | - |
| exon-exon | INS-IGF2 | 11 | - | HEMGN | 9 | - |
| exon-exon | NCOA4 | 10 | + | VARS1 | 6 | + |
| intron-exon | MEF2A | 15 | + | MFAP5 | | - |
| exon-exon | NKAIN1 | 1 | + | WDR54 | 2 | - |
| exon-intron | NDUFB4 | 3 | - | NUP160 | 11 | + |
| exon-exon | STING1 | 5 | + | OLA1 | 2 | + |
| exon-exon | THOC1 | 18 | - | USP14 | 18 | - |
| exon-intron | LOC107985504 | 21 | - | PDE9A | 21 | - |
| exon-intron | EVA1C | 21 | + | KPNA3 | 13 | - |
| exon-exon | NPLOC4 | 17 | - | NPLOC4 | 17 | + |
| exon-exon | RPL32 | 3 | - | CAND2 | 3 | - |
| exon-intron | CHP1 | 15 | + | NOD1 | | - |
| intron-exon | AFF1 | 4 | + | DNAJA4 | | - |
| intron-exon | AC244205.1 | 2 | + | TRARG1 | 17 | - |
| exon-intron | LINC01145 | 1 | + | LINC02591 | | + |
| exon-exon | SEC14L2 | 22 | + | SLPI | 20 | - |
| exon-exon | SLPI | 20 | - | SEC14L2 | 22 | + |
| intron-exon | MAN1C1 | 1 | + | RWDD1 | 6 | + |
| intron-exon | AC024560.3 | 3 | - | PRRC2A | 6 | - |
| exon-exon | PLPPR3 | 19 | - | PTBP1 | 19 | - |
| exon-intron | PLIN4 | | + | SETD4 | 21 | + |
| exon-exon | CCZ1 | 7 | + | COG7 | 16 | - |
| exon-exon | PIK3R2 | 19 | - | COL16A1 | | + |
| exon-exon | SMARCC1 | | - | PTGDS | 9 | + |
| intron-exon | ENAH | 1 | - | MIEF1 | 22 | + |
| intron-exon | LCOR | 10 | - | LOC102723665 | | - |
| exon-exon | FAM210B | 20 | - | FAM210B | 20 | + |
| exon-exon | CCDC102A | 16 | + | CCDC102A | 16 | - |
| exon-intron | WHAMMP1 | 15 | - | LOC107987222 | 15 | - |
| intron-exon | NOP14 | 4 | - | NOP14-AS1 | 4 | - |
| exon-exon | HSPA13 | 21 | - | HSPBP1 | 19 | - |
| exon-intron | RPL26 | 17 | + | LSM14A | 19 | - |
| exon-exon | CD74 | 5 | - | SEPTIN2 | 2 | + |
| exon-exon | TNKS | 8 | + | GPC3 | X | - |
| exon-exon | IFT57 | 3 | - | IFT57 | 3 | + |
| exon-intron | DDX24 | 14 | + | RARRES1 | 3 | - |
| exon-exon | LINC02384 | 12 | - | LOC105369819 | 12 | - |
| exon-exon | RAB2A | 8 | - | RAB2A | 8 | + |
| exon-exon | FTL | 19 | + | FTL | 19 | - |
| intron-exon | HEG1 | 3 | - | PURA | | + |
| intron-exon | SIAH1 | 16 | - | AP1M1 | 19 | - |
| exon-exon | FTL | 19 | - | CAVIN2 | | + |
| intron-exon | USP2-AS1 | 11 | + | THY1 | 11 | - |
| intron-exon | USP2-AS1 | 11 | + | THY1 | 11 | - |
| exon-exon | SNHG12 | 1 | - | SRRT | 7 | + |
| exon-intron | PLIN4 | | - | VWF | 12 | - |
| exon-exon | FSTL1 | 3 | - | ATG9A | 2 | - |
| intron-exon | PKP4-AS1 | 2 | - | PKP4 | 2 | - |
| exon-exon | PDK2 | 17 | + | PDK2 | 17 | - |
| exon-exon | BASP1 | 5 | - | VGLL3 | 3 | + |
| exon-exon | KRBA2 | 17 | - | UQCRC1 | 3 | - |
| exon-exon | FCGR2B | | - | FCGR2C | | - |
| exon-exon | GJC1 | 17 | - | HSPB1 | 7 | + |
| exon-exon | PSG2 | 19 | - | PSG1 | 19 | - |
| intron-exon | URI1 | 19 | + | AIP | 11 | + |
| exon-exon | PSG2 | 19 | - | PSG1 | 19 | - |
| exon-exon | CGA | 6 | - | KDM5A | 12 | - |
| intron-exon | TTC28 | 22 | - | DHX30 | 3 | + |
| exon-intron | DOP1B | 21 | + | DOP1B | 21 | - |
| exon-exon | SPEN | 1 | + | H19 | 11 | - |
| exon-intron | H19 | 11 | - | MRPL21 | 11 | - |
| intron-exon | ADPRM | 17 | + | TMEM220 | | + |
| exon-exon | IFT140 | 16 | - | ATP6V0A1 | 17 | + |
| intron-exon | RP11-960L18.1 | | + | PLCG2 | 16 | + |
| exon-exon | GBF1 | 10 | - | ARF3 | 12 | + |
| exon-intron | MPP1 | X | + | SGSM1 | 22 | - |
| exon-intron | TCAF1 | 7 | - | LOC112267988 | 7 | - |
| intron-exon | RP11-960L18.1 | | + | PLCG2 | 16 | + |
| exon-intron | DDX24 | 14 | - | AL513524.1 | | + |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-intron | CEP78 | 9 | + | LRPPRC | 2 | - |
| exon-exon | B3GNTL1 | 17 | - | TBCD | 17 | - |
| intron-exon | HBA2 | 16 | + | CFL1 | 11 | - |
| exon-exon | CD3G | 11 | - | TRIM10 | 6 | + |
| exon-exon | SLC22A11 | | + | MYBPC1 | 12 | + |
| exon-exon | HLA-DRB1 | 6 | - | HLA-DRB5 | 6 | - |
| exon-exon | ADH1A | 4 | - | H19 | 11 | - |
| exon-exon | RNU6-1 | 15 | - | TUBA1B | 12 | - |
| exon-exon | NDUFA5 | 7 | - | FOXN3 | 14 | - |
| exon-intron | HBG2 | 11 | + | LOC106099064 | | + |
| intron-exon | AUTS2 | 7 | + | OAF | 11 | + |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| exon-exon | USF2 | 19 | - | USF2 | 19 | + |
| exon-intron | IGHE | | - | IGH | 14 | - |
| exon-exon | KCNC1 | | - | KCNC1 | | + |
| exon-exon | GNB5 | 15 | + | RGS1 | 1 | + |
| exon-exon | SNRPE | 1 | + | PRTFDC1 | 10 | - |
| exon-exon | RUNX1 | 21 | - | TARDBP | 1 | + |
| exon-exon | FUS | 16 | + | DDIT3 | 12 | - |
| exon-exon | KMT2A | 11 | + | AFF1 | 4 | + |
| intron-exon | RUNX1 | 21 | - | MECOM | 3 | - |
| exon-exon | LOC112267931 | 5 | - | SERPINB6 | 6 | - |
| exon-exon | TRAV41 | 14 | + | TRAJ30 | | + |
| intron-exon | GREB1L | 18 | + | PPIC | 5 | - |
| exon-exon | NCOA4 | 10 | - | RET | 10 | + |
| exon-intron | NCAM1 | 11 | + | TMEM132C | 12 | + |
| exon-exon | KMT2A | 11 | + | MLLT6 | 17 | + |
| exon-exon | EWSR1 | 22 | + | ERG | 21 | - |
| exon-exon | EWSR1 | 22 | + | ERG | 21 | - |
| exon-exon | BRCC3 | X | + | TRAC | 14 | + |
| intron-exon | TRG | 7 | - | TARP | | - |
| exon-exon | EWSR1 | 22 | + | WT1 | 11 | - |
| exon-exon | WARS1 | 14 | + | NFYC | 1 | + |
| exon-exon | FUS | 16 | + | DDIT3 | 12 | - |
| exon-exon | FUS | 16 | + | ERG | 21 | - |
| exon-exon | GYPA | | - | GYPB | | - |
| exon-exon | HMGA2 | 12 | + | ALDH2 | 12 | + |
| exon-intron | PTK2B | 8 | - | PTK2B | 8 | + |
| exon-exon | ND4 | MT | - | FCN1 | 9 | - |
| intron-exon | NPM1 | 5 | + | ALK | 2 | - |
| exon-exon | NEAT1 | 11 | - | NCOR2 | 12 | - |
| exon-exon | IGHV4-59 | 14 | - | IGHV4-55 | | - |
| exon-exon | PTGES | 9 | + | SOX2-OT | 3 | - |
| exon-intron | DNAJA1P6 | | - | GOLGA2P10 | | + |
| exon-intron | HMGCS1 | 5 | - | GPR158 | 10 | + |
| exon-intron | RPGRIP1L | | - | KCNMB2 | 3 | + |
| intron-exon | BASP1 | 5 | + | AGK | 7 | + |
| intron-exon | SDK1 | 7 | - | XIST | X | - |
| intron-exon | MTMR3 | 22 | + | BRWD1 | 21 | + |
| exon-exon | PCDHB19P | 5 | + | MACROH2A1 | 5 | - |
| exon-exon | MYCBP2 | 13 | - | PCBP2 | 12 | + |
| exon-exon | ITFG1 | 16 | - | RNU12 | | + |
| exon-exon | FLAD1 | 1 | - | TUBB | 6 | - |
| exon-intron | YWHAZ | 8 | + | CCDC92 | 12 | - |
| exon-intron | RGS12 | 4 | + | ZNF586 | 19 | + |
| exon-intron | FKBP4 | 12 | + | DIP2C | 10 | - |
| exon-intron | SLFNL1-AS1 | 1 | + | PBX1 | 1 | - |
| intron-exon | ZNF605 | 12 | - | NCAN | 19 | + |
| exon-intron | SHF | 15 | - | AKT3 | 1 | - |
| exon-exon | NFIB | 9 | - | WASH2P | | + |
| exon-exon | APEX1 | 14 | - | CDKN2AIP | | + |
| exon-intron | PDXK | 21 | + | LOC102723686 | | + |
| exon-exon | DYNLRB1 | 20 | - | ZNF154 | 19 | - |
| intron-exon | MOSPD3 | 7 | + | LMO3 | 12 | - |
| exon-exon | MSN | X | + | NLGN3 | X | - |
| intron-exon | NCAM1 | 11 | - | CALM3 | 19 | + |
| exon-exon | UCHL5 | 1 | - | LINC01159 | | - |
| exon-exon | PTPRS | 19 | + | ZBTB41 | | + |
| exon-intron | SNU13 | 22 | + | SBF2 | 11 | + |
| intron-exon | MAP2 | 2 | - | NAV1 | 1 | + |
| intron-exon | IGSF3 | | - | NSG1 | 4 | - |
| intron-exon | TACC2 | 10 | - | CBX5 | 12 | - |
| exon-exon | NDST2 | 10 | - | STAT3 | 17 | - |
| intron-exon | OLFM2 | 19 | + | GRIA1 | 5 | + |
| exon-exon | RPL37A | 2 | - | PIK3R1 | 5 | + |
| intron-exon | UGT2B7 | 4 | - | FTO | 16 | + |
| exon-intron | CACNB3 | 12 | - | CCDC65 | | - |
| exon-intron | CDK14 | 7 | - | HS3ST4 | 16 | + |
| intron-exon | FARSB | | - | LRFN3 | 19 | - |
| exon-intron | COCH | 14 | + | ST6GAL1 | 3 | - |
| intron-exon | ARHGAP32 | 11 | - | KIF5A | 12 | - |
| exon-intron | SOGA3 | 6 | - | EHMT1 | 9 | + |
| exon-exon | IGFBP7 | 4 | + | PLXNA4 | 7 | + |
| exon-exon | EEF2 | 19 | + | ABHD6 | 3 | + |
| exon-intron | ZNF234 | | + | ANKRD36 | 2 | - |
| intron-exon | MARCHF6 | 5 | + | PLEKHA1 | 10 | + |
| exon-intron | TFG | 3 | + | TRPC5 | X | - |
| exon-intron | RPL8 | 8 | - | MCF2L2 | 3 | - |
| intron-exon | LINC02444 | | + | GOT2 | 16 | + |
| intron-exon | ANKFN1 | 17 | + | SYBU | 8 | + |
| exon-exon | TUBB4A | 19 | + | TCF4 | 18 | + |
| exon-intron | WDR47 | 1 | + | MPC1 | | - |
| intron-exon | ACTR3C | 7 | - | FBXO9 | 6 | + |
| exon-exon | FUS | 16 | - | HDAC5 | 17 | + |
| exon-exon | MEGF9 | 9 | + | AP1G1 | 16 | - |
| exon-intron | TRA2A | 7 | - | C22orf39 | 22 | + |
| exon-intron | SARAF | 8 | - | RPL36A-HNRNPH2 | X | + |
| exon-exon | HECTD1 | 14 | - | CFL1 | 11 | - |
| exon-exon | CCDC142 | 2 | - | LAMA2 | 6 | - |
| intron-exon | LOC101927572 | 19 | + | ZMYND11 | 10 | + |
| exon-intron | PALM3 | 19 | + | LOC107985041 | | + |
| intron-exon | CBWD6 | 9 | - | KLF6 | 10 | - |
| intron-exon | PALB2 | | + | ZBTB7A | 19 | + |
| exon-exon | ANKRD36B | 2 | + | RIMKLB | 12 | + |
| exon-exon | YWHAE | 17 | - | PIAS4 | 19 | + |
| intron-exon | C20orf96 | 20 | + | RAB12 | 18 | - |
| exon-exon | RAPH1 | 2 | + | EVL | 14 | + |
| exon-exon | KCNV1 | | + | MIR100HG | 11 | - |
| exon-intron | ARHGAP35 | 19 | - | MPP4 | 2 | - |
| intron-exon | RBM10 | X | - | VCL | 10 | - |
| exon-exon | TIA1 | 2 | + | HSPA13 | 21 | + |
| exon-intron | FOXO1 | 13 | + | CASC15 | 6 | - |
| intron-exon | SYNJ2BP-COX16 | 14 | + | GABBR1 | | - |
| intron-exon | SPAG9 | 17 | - | MAPT | 17 | - |
| exon-exon | BEX3 | X | + | SRGAP2 | 1 | - |
| intron-exon | USF3 | 3 | + | P2RX5-TAX1BP3 | 17 | - |
| exon-exon | PEA15 | 1 | + | CDH2 | 18 | + |
| exon-exon | AFF3 | 2 | + | RTN4 | 2 | + |
| exon-intron | RERE | 1 | + | AC002117.1 | 17 | + |
| intron-exon | KLHL7 | 7 | + | BRD1 | 22 | + |
| exon-intron | PCDHA11 | 5 | - | NRXN1 | 2 | - |
| exon-intron | ATG9A | 2 | + | SNTG2 | 2 | + |
| exon-exon | SCARF2 | 22 | + | AKAP9 | 7 | + |
| exon-exon | CKAP5 | 11 | - | RNF144A | 2 | + |
| exon-exon | NEUROD2 | 17 | - | IRF2BP2 | 1 | + |
| exon-intron | TMEM158 | 3 | - | CELF2 | 10 | - |
| intron-exon | USP43 | 17 | - | AHSA1 | 14 | + |
| exon-intron | SLIT1 | 10 | + | LDLRAD4 | 18 | + |
| exon-exon | SEZ6L | 22 | + | GAP43 | 3 | + |
| exon-exon | EFTUD2 | 17 | - | MAP2 | 2 | + |
| intron-exon | FN3K | | + | LCMT1 | | - |
| intron-exon | LOC105369302 | | - | LOC101927745 | | - |
| intron-exon | ZNF91 | 19 | + | PRPF8 | 17 | - |
| intron-exon | CDK13 | 7 | - | ARHGAP35 | 19 | - |
| intron-exon | SORCS3 | 10 | + | REC8 | 14 | - |
| exon-intron | ARID1A | 1 | + | LOC105373177 | | - |
| exon-exon | PPP1R14B | 11 | - | GTF2B | 1 | + |
| exon-exon | PRR14L | 22 | + | USP11 | X | + |
| exon-exon | DCX | | + | LRRC7 | 1 | - |
| exon-intron | NRXN1 | 2 | - | PPP2R2B | 5 | - |
| intron-exon | NLGN1 | 3 | + | NCAM1 | 11 | + |
| exon-intron | EIF4G2 | 11 | - | SDS | | - |
| exon-exon | YWHAZP3 | | - | CIRBP | 19 | - |
| intron-exon | WDR7 | 18 | - | TTBK1 | 6 | - |
| exon-exon | LINC00643 | 14 | + | H2AC6 | 6 | - |
| exon-exon | BSN | 3 | - | BSN | 3 | + |
| exon-exon | COX6C | 8 | + | FURIN | 15 | - |
| exon-exon | PERP | 6 | + | PERP | 6 | - |
| intron-exon | AKR1E2 | | + | AKR1C1 | 10 | + |
| exon-exon | SDF4 | 1 | - | PLA2G15 | 16 | - |
| intron-exon | PBX1 | 1 | - | BUD23 | 7 | + |
| exon-exon | HBA2 | 16 | - | LGALS1 | 22 | + |
| exon-exon | MFN2 | 1 | + | MFN2 | 1 | - |
| exon-intron | MYL7 | 7 | - | PALLD | 4 | - |
| intron-exon | ADCY5 | 3 | - | HELLS | 10 | + |
| exon-intron | HTATSF1 | X | + | PTPRG | 3 | + |
| exon-intron | ZFP82 | 19 | - | WDR62 | | - |
| exon-intron | CD34 | 1 | - | PTEN | 10 | + |
| exon-exon | NFE2L1 | 17 | - | TSPAN11 | 12 | + |
| intron-exon | CCT6A | 7 | - | PABPC1 | 8 | - |
| exon-exon | RFFL | 17 | - | FLNA | X | + |
| intron-exon | DAB1 | 1 | - | NDUFA4 | 7 | - |
| intron-exon | ROR2 | 9 | + | PALLD | 4 | + |
| exon-intron | ACTC1 | 15 | - | LOC101928174 | 15 | + |
| exon-intron | MEG3 | 14 | + | MYH11 | 16 | - |
| exon-exon | MCM7 | 7 | - | MCM7 | 7 | + |
| intron-exon | MRPL23 | 11 | + | RPL13 | 16 | + |
| exon-exon | AOPEP | 9 | - | BMP1 | 8 | + |
| intron-exon | CELF2 | 10 | - | TOP2A | 17 | - |
| exon-intron | RPL7 | 8 | - | CSF1R | 5 | - |
| exon-exon | HSPA8 | 11 | + | EEF1D | 8 | - |
| intron-exon | SIRT5 | 6 | + | SOBP | 6 | + |
| exon-exon | ACTN2 | 1 | + | ACTN2 | 1 | - |
| exon-exon | PTMAP5 | 13 | - | MTSS2 | 16 | - |
| exon-exon | FIBP | 11 | + | U2SURP | 3 | - |
| exon-intron | RPS14 | 5 | + | DENND1A | 9 | + |
| exon-exon | FBXO25 | 8 | + | VDAC2P5 | | + |
| intron-exon | LINC01237 | | - | PEA15 | 1 | - |
| intron-exon | LOC105375034 | | + | RHOA | 3 | - |
| exon-exon | LOC101927439 | | - | HNRNPUL1 | 19 | + |
| exon-exon | SPAG6 | | - | PCMT1 | 6 | + |
| exon-exon | SNHG14 | 15 | + | RREB1 | 6 | + |
| exon-exon | SET | 9 | + | SET | 9 | - |
| exon-exon | BAG6 | 6 | - | BAG6 | 6 | + |
| exon-intron | FNTAP1 | | + | REV3L | 6 | - |
| intron-exon | OR2S1P | 9 | + | IK | 5 | + |
| intron-exon | EXT1 | 8 | + | SLC25A26 | 3 | + |
| intron-exon | CACNA1C | 12 | - | CABIN1 | 22 | + |
| exon-intron | MRPL27 | 17 | + | CCDC150 | 2 | + |
| exon-exon | KCNQ1OT1 | 11 | - | HGSNAT | 8 | + |
| exon-intron | RASL11B | 4 | + | CSRNP3 | 2 | + |
| intron-exon | TNPO2 | 19 | + | ACTB | 7 | - |
| exon-intron | LOC100996437 | 7 | + | AC027644.4 | 7 | + |
| intron-exon | RNR2 | MT | + | RPL10 | X | + |
| intron-exon | CHURC1-FNTB | 14 | + | CAMSAP2 | 1 | + |
| exon-exon | TPM1 | 15 | + | HOPX | 4 | - |
| exon-exon | DDB1 | 11 | + | HEXA | 15 | - |
| exon-exon | RARG | 12 | - | TACC2 | 10 | - |
| exon-intron | GARS1 | 7 | - | FKBP15 | 9 | + |
| exon-intron | RFC2 | 7 | - | SIN3B | 19 | + |
| exon-exon | CPLX2 | 5 | - | CPLX2 | 5 | + |
| exon-intron | MALAT1 | 11 | + | AC092683.1 | | - |
| intron-exon | JUP | 17 | - | EIF1 | 17 | - |
| exon-exon | DERL1 | 8 | - | SUMO2 | 17 | - |
| exon-exon | BSN | 3 | - | BSN | 3 | + |
| exon-exon | MYH10 | 17 | + | ARHGEF10L | 1 | - |
| intron-exon | AC242842.3 | | + | PABPC4 | 1 | - |
| intron-exon | BRI3 | 7 | + | RHOBTB3 | 5 | - |
| exon-exon | CD99L2 | X | - | DENR | 12 | + |
| exon-exon | TRIP12 | 2 | + | TRIP12 | 2 | - |
| exon-exon | IGLV3-21 | 22 | + | IGLL5 | 22 | + |
| exon-exon | ADH1B | | + | ADH1C | 4 | - |
| exon-exon | ZNHIT1 | 7 | - | PLOD3 | 7 | - |
| exon-exon | APOA1 | 11 | + | APOA1-AS | 11 | + |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-exon | MGAT1 | 5 | + | RPS12P22 | | - |
| intron-exon | DTL | 1 | + | PABPC1L | 20 | + |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| exon-exon | WIPI2 | 7 | - | ITGB5 | 3 | + |
| exon-exon | FABP1 | 2 | - | HBG2 | 11 | - |
| intron-exon | PMS2 | 7 | - | RSPH10B2 | | + |
| exon-intron | FKBP1C | 6 | - | FKBP1A-SDCBP2 | 20 | - |
| exon-exon | ZNF703 | 8 | - | GH2 | 17 | - |
| exon-intron | NOP58 | 2 | + | C8orf34-AS1 | | - |
| exon-intron | PAPPA2 | 1 | - | AC073325.1 | | - |
| exon-exon | LOC100288203 | 15 | - | LOC100288203 | | + |
| intron-exon | TNIK | 3 | + | TNIK | 3 | - |
| intron-exon | WDFY1 | 2 | + | NFATC2IP | 16 | - |
| exon-exon | HBG2 | 11 | + | HBG2 | 11 | - |
| exon-exon | PLCL2 | 3 | + | SREK1 | 5 | + |
| intron-exon | MYH14 | 19 | - | LOC100289500 | | + |
| exon-exon | INS-IGF2 | 11 | + | INS-IGF2 | 11 | - |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-intron | RNU6-9 | 19 | + | CD36 | | + |
| exon-exon | RPS6 | 9 | - | RPS6P10 | 9 | - |
| exon-exon | RPS6 | 9 | + | RPL27 | 17 | + |
| exon-intron | ORM1 | 9 | - | AOPEP | 9 | - |
| exon-exon | TCP1 | 6 | - | ACAT2 | 6 | - |
| exon-exon | NT5DC2 | 3 | - | STAB1 | 3 | - |
| exon-exon | APOA1 | 11 | + | APOA1-AS | 11 | + |
| exon-intron | IGKC | 2 | + | IGK | 2 | + |
| exon-exon | APOA1 | 11 | + | APOA1-AS | 11 | + |
| intron-exon | LINC02643 | | - | DHX8 | 17 | - |
| exon-exon | APOA1 | 11 | + | APOA1-AS | 11 | + |
| intron-exon | SPAG1 | | + | PABPC1 | 8 | + |
| exon-intron | PBRM1 | 3 | - | SMIM4 | 3 | - |
| exon-exon | INS-IGF2 | 11 | + | RSL1D1 | 16 | + |
| intron-exon | LOC105372791 | | + | SMIM11A | | + |
| exon-exon | WARS1 | 14 | - | WARS1 | 14 | + |
| exon-intron | IGKC | 2 | + | IGK | 2 | + |
| intron-exon | IGH | 14 | + | IGHG1 | 14 | + |
| exon-intron | SPRY3 | X | - | SH2B1 | 16 | + |
| exon-exon | SRSF5 | 14 | + | SLC10A1 | | + |
| exon-exon | APOA1 | 11 | + | APOA1-AS | 11 | + |
| exon-intron | ZNRF2 | 7 | + | ELF3 | 1 | + |
| exon-intron | LOC112268064 | | + | LOC101929268 | | + |
| intron-exon | HMGCLL1 | 6 | - | GTPBP1 | 22 | + |
| exon-exon | HP | 16 | + | HPR | 16 | + |
| exon-exon | APOA1 | 11 | + | APOA1-AS | 11 | + |
| exon-exon | USP11 | X | + | SIRPA | 20 | + |
| exon-intron | FXYD1 | 19 | - | LGI4 | 19 | - |
| exon-exon | AKR1C3 | 10 | - | AKR1C1 | 10 | - |
| exon-exon | PLD3 | 19 | + | HIPK4 | 19 | + |
| exon-exon | BAHD1 | 15 | - | BAHD1 | 15 | + |
| intron-exon | AC083843.2 | | + | NCRNA00250 | | + |
| intron-exon | ENAH | 1 | - | MIEF1 | 22 | + |
| exon-exon | LOC100133286 | 21 | + | CBR1 | 21 | + |
| exon-exon | DLC1 | 8 | + | DLC1 | 8 | - |
| exon-exon | DYNC1H1 | 14 | + | ZMYND8 | 20 | - |
| exon-exon | ID3 | 1 | + | ID3 | 1 | - |
| intron-exon | LOC642484 | 18 | + | LINC01905 | 18 | + |
| intron-exon | ZNF814 | 19 | - | ZNF587 | 19 | - |
| intron-exon | LOC105372471 | 19 | - | ZNF667-AS1 | 19 | - |
| exon-intron | IFNGR1 | 6 | + | CPS1 | | - |
| intron-exon | ZNF814 | 19 | - | ZNF587 | 19 | - |
| intron-exon | MS4A6E | 11 | + | MS4A7 | 11 | + |
| intron-exon | PSG4 | 19 | - | PSG2 | 19 | - |
| exon-intron | IDH3A | 15 | + | IP6K1 | | + |
| intron-exon | HERC1 | 15 | - | TPT1 | 13 | - |
| intron-exon | MRPL23 | 11 | + | TUBB | 6 | + |
| exon-exon | NME4 | 16 | + | DECR2 | 16 | + |
| intron-exon | DMGDH | 5 | - | RNF214 | 11 | + |
| exon-intron | PSMD14 | 2 | + | ITFG1 | 16 | - |
| exon-intron | ALB | 4 | + | RFC2 | 7 | + |
| exon-exon | SFTPA2 | 10 | + | SFTPA1 | 10 | + |
| exon-intron | RPS20P26 | | + | NUP160 | 11 | + |
| intron-exon | LOC105374258 | 3 | - | FETUB | 3 | - |
| exon-exon | LOC107984428 | | - | LOC107984429 | | - |
| exon-exon | PIGG | 4 | - | PIGG | 4 | + |
| exon-exon | AKR7L | 1 | - | TPTEP2-CSNK1E | 22 | + |
| exon-intron | ZFAND5 | 9 | - | MSH6 | 2 | - |
| intron-exon | SLX4IP | 20 | + | YWHAEP7 | | - |
| exon-intron | UBE2R2 | 9 | + | SLC22A12 | | + |
| exon-exon | FN1 | 2 | - | YWHAG | 7 | - |
| exon-exon | HBA2 | 16 | + | PEG10 | 7 | + |
| intron-exon | LOC101927369 | 17 | + | CCL4 | 17 | + |
| exon-exon | CLCN6 | 1 | + | NPPA-AS1 | 1 | + |
| exon-exon | D2HGDH | 2 | - | D2HGDH | | + |
| exon-intron | TMED4 | 7 | - | MAPK1 | 22 | + |
| exon-exon | HECTD4 | 12 | - | OLFM1 | 9 | + |
| exon-exon | DGCR8 | | - | TANGO2 | 22 | - |
| exon-exon | MLST8 | | - | MLST8 | 16 | + |
| exon-exon | EXOC3 | 5 | - | EXOC3 | 5 | + |
| intron-exon | NLK | 17 | - | LOC105371709 | | + |
| exon-exon | ZFR | 5 | - | ZFR | 5 | + |
| exon-exon | ALG13 | X | - | ALG13 | | + |
| exon-exon | PAX3 | 2 | - | FOXO1 | 13 | - |
| intron-exon | PPFIBP1 | 12 | - | AKAP13 | 15 | + |
| intron-exon | S100A6 | 1 | + | CDK11B | 1 | - |
| intron-exon | CFAP74 | 1 | - | CDK11A | 1 | - |
| exon-exon | SMARCB1 | 22 | + | ANKRD28 | 3 | + |
| exon-exon | GFAP | 17 | + | CHN2 | 7 | + |
| intron-exon | ELAPOR2 | 7 | + | AMPH | 7 | - |
| exon-exon | UBE2Q2 | 15 | - | NFRKB | 11 | - |
| intron-exon | SPSB1 | | - | TRIM26 | 6 | - |
| exon-exon | MFSD11 | 17 | + | NR2C2 | 3 | + |
| exon-exon | NFX1 | 9 | - | NFX1 | 9 | + |
| exon-exon | RPS7 | 2 | - | TONSL | 8 | - |
| exon-exon | TIAM1 | 21 | - | QKI | 6 | - |
| exon-exon | VIPR2 | | - | ND2 | MT | + |
| exon-exon | GAGE13 | X | - | GAGE12J | | + |
| exon-exon | TPR | 1 | - | MET | 7 | + |
| intron-exon | NHSL2 | X | + | CXCL12 | 10 | - |
| intron-exon | RAB31 | 18 | + | ZEB1 | 10 | + |
| intron-exon | CDK13 | 7 | + | PDZK1IP1 | 1 | - |
| exon-exon | HNRNPA1P48 | 16 | - | ATE1 | 10 | - |
| intron-exon | LOC107984355 | 11 | + | LSS | 21 | - |
| intron-exon | LOC105370027 | 12 | - | BMPR2 | 2 | + |
| intron-exon | MAP2K5 | 15 | + | RTN3 | 11 | - |
| exon-exon | TMEM245 | 9 | - | GOLM1 | 9 | - |
| exon-exon | TSNARE1 | 8 | + | RIF1 | 2 | + |
| intron-exon | LOC101928844 | 19 | - | FUT3 | 19 | - |
| exon-exon | PTPN18 | 2 | - | KLF8 | X | + |
| exon-exon | CELF1 | 11 | + | DNAJC3 | 13 | + |
| intron-exon | SSX1 | | + | RBM3 | X | + |
| exon-exon | LARP1 | 5 | - | PAPPA | 9 | + |
| exon-intron | METAP2 | 12 | + | NTN4 | 12 | + |
| exon-exon | COX1 | MT | - | TRPC1 | 3 | + |
| intron-exon | PFKP | 10 | - | PABPC4 | 1 | - |
| exon-exon | SEMA3F | 3 | + | SATB1 | 3 | - |
| intron-exon | SYT1 | 12 | - | AQP4 | 18 | - |
| intron-exon | ACSBG1 | 15 | - | ABCG1 | 21 | + |
| exon-exon | ALKBH5 | 17 | - | GAPDH | 12 | + |
| intron-exon | AC025614.2 | | + | GPR4 | | - |
| exon-exon | BMS1P20 | 22 | + | IGLV1-47 | 22 | + |
| exon-exon | HNRNPK | 9 | + | NCOR2 | 12 | - |
| exon-exon | CST4 | 20 | + | ALDH3B2 | 11 | - |
| exon-exon | BMS1P20 | 22 | + | IGLV1-47 | 22 | + |
| exon-exon | CELF2 | 10 | + | MAB21L1 | 13 | - |
| exon-exon | TRAV14DV4 | 14 | + | TRAJ33 | 14 | + |
| exon-exon | TRAV35 | 14 | + | TRAJ36 | 14 | + |
| exon-intron | NIPBL-DT | | + | KCNJ3 | | + |
| exon-exon | KIF21B | 1 | + | PPIG | 2 | + |
| exon-exon | NPM1 | 5 | + | RARA | 17 | + |
| exon-exon | MYO9B | 19 | + | CRACDL | 2 | - |
| intron-exon | DPYD | 1 | - | KISS1 | 1 | - |
| intron-exon | CFAP46 | 10 | - | KSR1 | 17 | + |
| exon-intron | MAP2K4 | 17 | - | ANK3 | 10 | - |
| intron-exon | LINC01358 | | - | SUPT6H | 17 | + |
| exon-exon | NDST4 | 4 | - | TRPC3 | 4 | - |
| exon-exon | GIHCG | 12 | + | GIHCG | 12 | - |
| intron-exon | TMEM117 | | + | TOMM6 | 6 | + |
| exon-exon | DVL3 | 3 | + | NCS1 | | - |
| exon-exon | MARCKSL1 | 1 | + | LOC606724 | | + |
| exon-exon | RPS5 | 19 | - | HDAC1 | 1 | + |
| exon-exon | HINT1 | 5 | + | HINT1 | 5 | - |
| exon-exon | IQGAP1 | 15 | - | PSMD4 | 1 | + |
| intron-exon | YWHAQ | 2 | - | TDG | 12 | + |
| exon-exon | TRAV14DV4 | 14 | + | TRAJ53 | 14 | + |
| exon-intron | TRAV17 | 14 | + | TRA | 14 | + |
| exon-exon | RPS11 | 19 | - | IDH2 | 15 | - |
| intron-exon | SLC25A51 | 9 | - | KCNJ6 | 21 | - |
| intron-exon | ATP8A1 | 4 | + | EZH2 | 7 | - |
| exon-intron | FKBP8 | 19 | + | LOC112543469 | 19 | + |
| intron-exon | DYRK1A | 21 | - | MTMR1 | X | + |
| intron-exon | MIATNB | 22 | + | CDH13 | 16 | + |
| intron-exon | AC069277.1 | | + | LOC105376944 | | + |
| exon-exon | SPOP | 17 | - | SORL1 | 11 | + |
| exon-exon | CD74 | 5 | + | NR6A1 | 9 | - |
| exon-intron | LINC00893 | X | - | LOC106050102 | X | + |
| exon-intron | EOLA1 | X | - | LOC106050102 | X | + |
| intron-exon | GNB1 | 1 | + | CASP7 | 10 | + |
| intron-exon | VPS26C | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | HBA2 | 16 | - | SERPINB9 | 6 | - |
| exon-exon | IGFBP5 | 2 | + | YAF2 | 12 | - |
| intron-exon | NFASC | 1 | + | DVL3 | 3 | + |
| intron-exon | BTBD9 | 6 | - | DNASE1L3 | 3 | - |
| exon-exon | RAPGEF6 | 5 | + | GALC | 14 | - |
| exon-intron | RNF20 | 9 | - | LAMA4 | 6 | - |
| exon-exon | CBX5 | 12 | - | LINC00667 | 18 | + |
| exon-exon | MAML3 | 4 | - | SERPINE2 | 2 | + |
| exon-exon | CAMK2G | 10 | - | SRP72 | 4 | + |
| exon-intron | HESX1 | 3 | - | FAT3 | 11 | - |
| intron-exon | DGCR2 | 22 | + | SIVA1 | 14 | + |
| exon-exon | IGLV1-47 | 22 | + | IGLL5 | 22 | + |
| exon-exon | FBXW2 | 9 | - | GPR37 | | - |
| exon-exon | KCNQ1 | 11 | - | KCNQ1 | 11 | + |
| exon-exon | CYFIP2 | 5 | - | ETF1 | 5 | - |
| intron-exon | RNA18SP5 | 21 | + | IRX6 | | + |
| exon-exon | ACOT7 | 1 | + | ACOT7 | 1 | - |
| exon-intron | RBMY3AP | | - | RBMY1A3P | | - |
| exon-exon | MFN1 | 3 | + | NONO | X | - |
| exon-exon | UTP25 | | - | DPYSL2 | 8 | + |
| exon-intron | IFNA14 | | - | IFNA7 | | - |
| exon-exon | ACTL6A | 3 | + | OSTC | 4 | + |
| exon-exon | CALD1 | 7 | + | NDUFV2 | 18 | + |
| exon-exon | GNPDA1 | 5 | + | GNPDA1 | 5 | - |
| exon-exon | APOB | 2 | - | MT1G | 16 | - |
| intron-exon | MRC2 | 17 | + | OSBP2 | 22 | + |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-intron | RPL18 | 19 | + | ALCAM | 3 | - |
| exon-exon | STAT6 | 12 | - | SH3KBP1 | X | - |
| exon-exon | SERPING1 | 11 | + | EIF4EBP2 | 10 | + |
| exon-intron | RPS17 | 15 | + | PCMTD1 | 8 | - |
| exon-exon | INS-IGF2 | 11 | - | MAGED2 | X | + |
| exon-exon | SDHAP2 | 3 | + | MIR570HG | 3 | + |
| exon-exon | ARHGDIA | 17 | - | MYH3 | 17 | - |
| exon-exon | RPL31P4 | 14 | - | RPL31 | 2 | + |
| exon-exon | HK1 | 10 | + | COL6A1 | 21 | + |
| exon-intron | LINC01106 | 2 | - | LINC01123 | | + |
| exon-exon | FAIM | 3 | - | SLAIN1 | 13 | - |
| intron-exon | RNA18SP5 | 21 | + | EMD | | + |
| exon-intron | MAGT1 | X | - | VPS4A | 16 | - |
| intron-exon | LOC102723335 | | - | PRKXP1 | 15 | - |
| intron-exon | IGK | 2 | + | USP3 | 15 | + |
| exon-exon | ASPH | 8 | + | PAPPA-AS1 | 9 | - |
| exon-exon | LOC107987206 | 14 | + | TAF6L | 11 | + |
| intron-exon | SMN2 | 5 | + | NDFIP1 | 5 | + |
| exon-exon | SEM1 | 7 | + | GATAD2A | 19 | - |
| exon-exon | RPL34 | 4 | + | RPS6 | 9 | - |
| intron-exon | BCL6 | 3 | + | ZFP36L2 | 2 | - |
| exon-exon | WBP1L | 10 | - | WBP1L | 10 | + |
| exon-exon | LOC105378360 | 10 | + | BMS1P4-AGAP5 | 10 | + |
| exon-exon | TRAK2 | 2 | - | FLACC1 | 2 | - |
| intron-exon | LOC106014249 | 11 | + | PAX6 | 11 | - |
| exon-exon | GPX3 | 5 | - | NOMO1 | 16 | + |
| exon-exon | SNRNP200 | 2 | + | SNRNP200 | 2 | - |
| exon-exon | SMTN | 22 | - | SMTN | 22 | + |
| exon-exon | SFI1 | 22 | - | SFI1 | 22 | + |
| exon-exon | USH1C | 11 | + | USH1C | 11 | - |
| exon-intron | NRL | 14 | + | NRL | 14 | - |
| exon-exon | ACTB | 7 | + | ACTB | 7 | - |
| exon-intron | CRABP1 | | + | MFSD3 | 8 | + |
| exon-exon | EFNB2 | 13 | + | EFNB2 | 13 | - |
| intron-exon | LOC400541 | 16 | - | PDPR | 16 | + |
| exon-exon | ZMYM3 | X | + | ZMYM3 | X | - |
| exon-exon | TM9SF4 | 20 | - | TM9SF4 | 20 | + |
| exon-exon | DAZAP2 | 12 | - | DAZAP2 | 12 | + |
| exon-exon | FBXO7 | 22 | - | FBXO7 | 22 | + |
| exon-exon | LOC107984305 | 11 | - | ILK | 11 | + |
| exon-exon | PSMB7 | 9 | + | PSMB7 | 9 | - |
| exon-exon | LOC107987135 | 9 | - | PRRC2B | 9 | + |
| intron-exon | LOC101928059 | 1 | + | DENND4B | 1 | - |
| exon-exon | MXRA7 | 17 | + | MXRA7 | 17 | - |
| exon-exon | GUCA1A | | - | GUCA1A | 6 | + |
| exon-exon | BMPR2 | 2 | + | AP4S1 | 14 | + |
| exon-exon | CHGA | 14 | + | HGSNAT | 8 | + |
| exon-exon | BRK1 | 3 | + | POLR3C | 1 | + |
| exon-exon | PCSK7 | 11 | - | TAGLN | 11 | + |
| exon-exon | RNA45SN2 | 21 | + | TCN2 | | + |
| exon-exon | GPX3 | 5 | - | GPX3 | 5 | + |
| exon-exon | MAGED1 | X | - | MAGED1 | X | + |
| exon-exon | AIMP2 | 7 | + | EIF2AK1 | 7 | - |
| exon-exon | CLSTN1 | 1 | + | RBM10 | X | - |
| exon-exon | ATP6V0A1 | 17 | - | ATP6V0A1 | 17 | + |
| exon-exon | GNB1 | 1 | + | GNB1 | 1 | - |
| intron-exon | SAG | 2 | - | SAG | 2 | + |
| exon-exon | F13A1 | 6 | + | F13A1 | 6 | - |
| exon-exon | TASOR | 3 | + | TASOR | 3 | - |
| intron-exon | CHPF | | + | CHPF | 2 | - |
| exon-exon | HSP90AB1 | 6 | - | HSP90AB1 | 6 | + |
| exon-exon | IFITM3 | 11 | + | IFITM3 | 11 | - |
| exon-exon | CHMP7 | 8 | - | CHMP7 | 8 | + |
| exon-exon | CRY2 | 11 | - | CRY2 | 11 | + |
| exon-exon | PDE6A | 5 | + | PDE6A | | - |
| intron-exon | RGL4 | | + | GUSBP11 | 22 | - |
| exon-exon | ABHD6 | 3 | - | ABHD6 | 3 | + |
| exon-exon | BRD7 | 16 | + | BRD7 | 16 | - |
| exon-exon | NR2C2 | | + | MRPS25 | 3 | - |
| exon-exon | MCRS1 | 12 | + | MCRS1 | 12 | - |
| exon-exon | RTN4 | 2 | + | RTN4 | 2 | - |
| intron-exon | MTHFD1 | 14 | + | MTHFD1 | 14 | - |
| exon-exon | NCAM1 | 11 | - | NCAM1 | 11 | + |
| exon-intron | SAG | 2 | + | SAG | 2 | - |
| exon-exon | SLC1A3 | 5 | - | SLC1A3 | 5 | + |
| intron-exon | ERVK13-1 | | - | PDPK1 | 16 | + |
| exon-exon | HSP90B1 | 12 | - | HSP90B1 | 12 | + |
| exon-exon | NEFM | 8 | - | NEFM | 8 | + |
| intron-exon | SRPK2 | 7 | - | KMT2E | 7 | + |
| exon-exon | SMU1P1 | | + | SMU1 | | - |
| exon-exon | PFKFB2 | 1 | - | PFKFB2 | 1 | + |
| exon-intron | ELF2 | 4 | + | LOC102723944 | | - |
| exon-exon | ZNF692 | 1 | + | ZNF692 | 1 | - |
| exon-exon | VAT1L | | - | VAT1L | 16 | + |
| exon-exon | PTPRM | 18 | - | PTPRM | 18 | + |
| exon-exon | NPEPPS | 17 | - | NPEPPS | 17 | + |
| exon-exon | MAP1LC3B | 16 | - | MAP1LC3B | 16 | + |
| exon-exon | EFCAB11 | 14 | + | EFCAB11 | 14 | - |
| intron-exon | STX3 | 11 | - | STX3 | 11 | + |
| exon-exon | TUBG1 | 17 | - | TUBG1 | 17 | + |
| exon-exon | TSPAN3 | 15 | + | TSPAN3 | 15 | - |
| exon-exon | MAP3K6 | 1 | + | MAP3K6 | 1 | - |
| exon-exon | PDZRN3 | 3 | + | PDZRN3 | 3 | - |
| exon-exon | RHO | 3 | - | RHO | 3 | + |
| exon-exon | PRKDC | 8 | + | PRKDC | 8 | - |
| intron-exon | SERF2-C15ORF63 | 15 | + | SERINC4 | | - |
| exon-exon | SAG | 2 | - | SAG | 2 | + |
| exon-exon | MFSD5 | | - | MFSD5 | | + |
| exon-exon | TLN1 | 9 | + | TLN1 | 9 | - |
| exon-exon | TAGLN3 | 3 | - | TAGLN3 | 3 | + |
| exon-exon | BMERB1 | 16 | - | BMERB1 | 16 | + |
| exon-exon | NR3C2 | 4 | + | NR3C2 | 4 | - |
| intron-exon | LOC105378862 | 1 | + | CNN3 | 1 | - |
| intron-exon | CHCHD3 | 7 | + | EEF1G | 11 | - |
| exon-exon | FAM168A | | + | FAM168A | 11 | - |
| exon-exon | RHO | 3 | - | RHO | 3 | + |
| exon-exon | PRPH2 | 6 | + | PRPH2 | 6 | - |
| exon-exon | HK1 | 10 | - | HK1 | 10 | + |
| exon-exon | FAM3C | 7 | + | SERPINE2 | 2 | + |
| exon-exon | RN7SL4P | 3 | + | HCN2 | | + |
| intron-exon | WHRN | 9 | - | TRIM66 | 11 | + |
| exon-exon | PFKL | 21 | - | TPI1 | 12 | + |
| exon-exon | FAM214A | 15 | + | FAM214A | 15 | - |
| exon-exon | RMND5A | 2 | - | TALAM1 | 11 | - |
| exon-exon | AUP1 | 2 | - | PLAT | 8 | - |
| exon-exon | CD109 | 6 | + | NPHP1 | 2 | - |
| exon-exon | HIGD1A | 3 | + | HIGD1A | 3 | - |
| exon-intron | RNA45SN3 | 21 | + | AL590822.3 | | + |
| exon-exon | SAT1 | X | - | SAT1 | X | + |
| exon-exon | PRSS1 | 7 | - | PRSS1 | 7 | + |
| exon-exon | SLC4A4 | 4 | - | SLC4A4 | 4 | + |
| exon-exon | USP12 | | - | LOC105370124 | | - |
| intron-exon | B3GAT3 | 11 | + | CAVIN1 | 17 | + |
| exon-exon | CPA1 | 7 | - | CPA1 | 7 | + |
| exon-exon | PKM | 15 | + | PKM | 15 | - |
| exon-exon | TIMM23 | 10 | + | GNG12 | | - |
| exon-exon | SLC1A5 | 19 | + | SLC1A5 | 19 | - |
| intron-exon | CTD-2066L21.3 | 5 | - | LOC105374715 | | - |
| exon-exon | LRRFIP1 | 2 | - | EPRS1 | 1 | + |
| exon-exon | NPC2 | 14 | + | C12orf66 | 12 | + |
| exon-intron | PANX1 | 11 | - | HEPHL1 | 11 | - |
| intron-exon | LOC107985263 | 1 | - | SMYD2 | 1 | - |
| exon-exon | SPARC | 5 | - | FN1 | 2 | - |
| exon-exon | C11orf91 | 11 | + | CD59 | 11 | + |
| exon-exon | SNORD3B-1 | 17 | + | GPI | 19 | + |
| exon-exon | NIN | 14 | - | TAGLN | 11 | + |
| exon-exon | RPL32 | 3 | + | PPP2R1A | 19 | - |
| exon-exon | OAZ2 | 15 | - | THY1 | 11 | - |
| exon-exon | HNRNPH1 | 5 | - | URGCP-MRPS24 | 7 | - |
| exon-intron | DDX24 | 14 | + | SYN3 | 22 | - |
| exon-intron | TRAPPC10 | 21 | + | TRAPPC10 | 21 | - |
| exon-exon | SUMO3 | 21 | + | SUMO3 | 21 | - |
| exon-exon | ARHGAP12 | 10 | + | GFRA1 | 10 | - |
| exon-exon | PNLIP | 10 | - | PNLIP | 10 | + |
| exon-exon | ABRAXAS1 | 4 | - | MRPS18C | 4 | - |
| exon-exon | CAPN2 | 1 | - | CAPN2 | 1 | + |
| exon-exon | MGAT2 | 14 | - | MGAT2 | 14 | + |
| exon-intron | CKMT2-AS1 | 5 | - | CKMT2 | | - |
| exon-intron | LOC100129034 | 9 | + | TRPC3 | 4 | + |
| exon-intron | CZIB | 1 | - | MIR193BHG | 16 | - |
| intron-exon | FAM13A | 4 | - | TCAF1 | 7 | - |
| exon-exon | PRKDC | 8 | - | WDR83OS | 19 | - |
| exon-exon | COL4A1 | 13 | + | COL4A1 | 13 | - |
| intron-exon | MIR924HG | 18 | - | EEF1A1 | 6 | - |
| intron-exon | ADGRE3 | 19 | - | AGO2 | 8 | - |
| exon-intron | AGO2 | 8 | + | ADGRE3 | 19 | + |
| exon-exon | ANAPC4 | 4 | - | RTN4 | 2 | + |
| exon-exon | LINC02062 | | + | LOC107986436 | | + |
| exon-exon | FGF7 | | + | CBX3 | 7 | + |
| exon-intron | TRIP6 | 7 | - | ORAI2 | 7 | - |
| exon-intron | RPS6 | 9 | + | MYCBP2-AS1 | | + |
| exon-exon | AK2 | 1 | + | MMUT | | + |
| exon-exon | NACA | 12 | + | TTLL3 | 3 | - |
| intron-exon | CPB1 | 3 | - | CPB1 | 3 | + |
| exon-exon | CPSF7 | 11 | - | DNAJB6 | 7 | + |
| exon-exon | IL6STP1 | | - | IL6ST | 5 | - |
| intron-exon | LCORL | 4 | - | EHD2 | 19 | + |
| exon-exon | SLC33A1 | 3 | + | EGFR | 7 | - |
| intron-exon | ABCC6 | 16 | - | SEMA4G | 10 | + |
| exon-intron | FTL | 19 | + | NUTM2A-AS1 | 10 | - |
| exon-exon | TRABD | 22 | - | TRABD | 22 | + |
| exon-exon | MTARC2 | | + | PDE4DIP | 1 | + |
| exon-exon | ATE1 | 10 | - | MYH3 | 17 | - |
| exon-exon | C10orf71 | | - | C10orf71-AS1 | | - |
| intron-exon | LOC102724916 | 4 | - | MRPL1 | 4 | - |
| exon-exon | NSMCE2 | 8 | - | ZEB2 | 2 | + |
| exon-intron | C10orf71-AS1 | | + | C10orf71 | | + |
| exon-intron | POLR2B | 4 | + | IGF2BP3 | 7 | + |
| intron-exon | CHD9 | 16 | + | CASTOR3 | 7 | - |
| exon-intron | PPIF | 10 | - | SHOX2 | | - |
| intron-exon | SLC4A7 | 3 | + | CYP4A11 | | + |
| exon-intron | ALB | 4 | + | VPS13B | 8 | + |
| intron-exon | IL10RB-DT | 21 | - | IFNAR2 | 21 | - |
| exon-intron | EIF3A | 10 | + | FAM20C | 7 | - |
| exon-exon | TPST1 | 7 | - | PRG2 | 11 | + |
| intron-exon | ZNF69 | 19 | + | ZAN | 7 | - |
| exon-exon | A2M | 12 | - | AFMID | 17 | + |
| exon-exon | HEMGN | 9 | - | HSPD1 | 2 | - |
| exon-intron | LOC107986058 | | + | DENND3 | 8 | + |
| intron-exon | PRKAR1A | 17 | + | PDE8A | 15 | - |
| exon-exon | SMAD5-AS1 | | + | SMAD5 | 5 | + |
| exon-exon | NAA10 | X | + | GNAS | 20 | - |
| exon-exon | ANK1 | 8 | - | RNF185 | 22 | + |
| exon-exon | ND1 | MT | + | UQCRFS1 | 19 | - |
| exon-exon | CAV1 | 7 | + | HLA-E | 6 | + |
| exon-exon | DCAF5 | 14 | - | ARF1 | 1 | + |
| exon-exon | NUDT3 | 6 | + | OTUB1 | 11 | - |
| intron-exon | UPF3A | 13 | - | PLEKHH3 | 17 | + |
| intron-exon | NBPF10 | 1 | - | CDC37 | 19 | - |
| exon-intron | ZNF772 | 19 | - | AC004076.1 | 19 | - |
| intron-exon | PAIP2 | 5 | + | CEP43 | 6 | + |
| intron-exon | MITF | | + | PPFIBP1 | 12 | + |
| exon-intron | XXYLT1 | 3 | + | LOC100507291 | | - |
| exon-exon | FOXO3 | 6 | + | TCF4 | 18 | - |
| exon-intron | SRSF3 | 6 | - | SUGT1 | 13 | - |
| exon-exon | TPM3P5 | 19 | + | NTRK1 | 1 | + |
| exon-exon | TRAV16 | | + | TRAJ23 | 14 | + |
| intron-exon | TRAV12-2 | 14 | + | TRAJ18 | 14 | + |
| exon-intron | IGKV1D-33 | 2 | + | IGKJ4 | 2 | - |
| exon-exon | CAVIN3 | 11 | - | RAF1 | 3 | - |
| exon-exon | RPL13A | 19 | - | LCAT | 16 | - |
| exon-exon | RARA | 17 | - | RARA | 17 | + |
| exon-exon | C1S | 12 | - | C1S | 12 | + |
| exon-exon | RPL7A | 9 | + | NTRK1 | 1 | + |
| exon-exon | TRGV8 | | - | TARP | | - |
| exon-intron | TRGV8 | | - | TARP | | - |
| exon-exon | TMOD3 | 15 | + | MCF2 | X | - |
| exon-exon | CHN1 | 2 | + | CHN1 | 2 | - |
| exon-intron | FLT1 | 13 | - | GOLGA8M | | - |
| exon-intron | TRBV4-1 | 7 | + | TRB | 7 | + |
| exon-exon | HNRNPDL | 4 | + | HNRNPDL | 4 | - |
| intron-exon | LOC101926967 | 17 | + | UBTF | 17 | - |
| exon-exon | CD82 | 11 | + | GTF2I | 7 | + |
| intron-exon | AL583785.1 | | + | CEL | 9 | + |
| exon-exon | COX3 | MT | - | MYC | 8 | + |
| exon-intron | CCT4 | 2 | - | AGA | 4 | - |
| exon-exon | AFAP1 | 4 | - | RET | 10 | + |
| exon-intron | IGLV1-44 | 22 | + | IGL | 22 | + |
| exon-exon | RNA45SN1 | 21 | + | ADD1 | 4 | + |
| exon-exon | TRAV13-2 | 14 | + | TRAJ8 | 14 | + |
| exon-exon | ND2 | MT | + | GTF2B | 1 | - |
| exon-intron | TRAJ12 | | + | TRA | 14 | + |
| exon-intron | TRAJ28 | | + | TRA | 14 | + |
| exon-exon | EGR1 | 5 | + | MAPK3 | 16 | - |
| exon-exon | CD40 | 20 | + | CD40 | 20 | - |
| exon-intron | TRAJ32 | 14 | + | TRA | 14 | + |
| exon-exon | TPR | 1 | - | NTRK1 | 1 | + |
| exon-intron | BCL2 | 18 | - | IGH | 14 | - |
| intron-exon | IGH | 14 | + | MYC | 8 | + |
| exon-exon | CYTB | MT | - | SFTPD | | - |
| intron-exon | SNX16 | 8 | - | HIVEP2 | 6 | - |
| intron-exon | INTS9 | 8 | - | CDK16 | X | + |
| exon-intron | CCND1 | 11 | + | LTO1 | 11 | + |
| exon-exon | TRAK2 | 2 | - | SPAG11B | 8 | - |
| intron-exon | NRCAM | 7 | - | ADORA1 | 1 | + |
| intron-exon | BNC2 | 9 | + | ATP7A | X | + |
| exon-exon | RPL26P19 | 5 | - | ATP6V0E2 | 7 | + |
| intron-exon | RNR1 | MT | - | CCL7 | | + |
| exon-exon | TRGV9 | | - | TARP | | - |
| exon-exon | RBX1 | 22 | - | SPOCK1 | 5 | - |
| intron-exon | TRD | 14 | + | TRDC | 14 | + |
| exon-exon | LONP1 | 19 | - | AZIN1 | 8 | - |
| exon-exon | TRGV10 | | - | TARP | | - |
| exon-exon | TRGV11 | | - | TARP | | - |
| exon-exon | ZNF207 | 17 | - | NFU1 | 2 | - |
| intron-exon | TEK | 9 | - | MAN1A1 | 6 | - |
| exon-exon | TRBV25-1 | | - | TRBV25-1 | | + |
| exon-exon | FAU | 11 | - | RBM38 | 20 | + |
| exon-exon | TNFRSF4 | | - | TNFRSF4 | | + |
| intron-exon | NCF4-AS1 | 22 | - | NCF4 | 22 | + |
| exon-exon | LPXN | 11 | + | LAMA3 | 18 | + |
| exon-exon | YBX3 | 12 | + | VIPR1 | 3 | + |
| intron-exon | LOC100130950 | 17 | + | USP6 | 17 | + |
| exon-exon | CLCN3 | 4 | - | CLCN3 | 4 | + |
| exon-exon | UBALD2 | 17 | + | TNNT2 | 1 | - |
| exon-exon | MBD2 | 18 | - | ARCN1 | 11 | + |
| exon-exon | TNFRSF13C | 22 | + | SF3A3 | 1 | - |
| exon-exon | GRIA3 | X | + | PHF20 | 20 | + |
| exon-exon | CTSK | 1 | + | CTSK | 1 | - |
| exon-intron | KCNAB1 | 3 | + | TCF7L1 | 2 | + |
| exon-exon | MYBPC3 | 11 | - | COX3 | MT | + |
| exon-exon | TFG | 3 | + | NTRK1 | 1 | + |
| exon-exon | CEBPA | 19 | + | CEBPA | 19 | - |
| intron-exon | PACSIN2 | 22 | + | BIK | 22 | + |
| exon-exon | DGCR5 | 22 | - | DGCR5 | 22 | + |
| exon-intron | TRAV17 | 14 | + | TRA | 14 | + |
| intron-exon | TRAV14DV4 | 14 | + | TRAJ6 | 14 | + |
| exon-exon | EWSR1 | 22 | + | DDIT3 | 12 | - |
| exon-exon | CNKSR2 | X | + | PIP5K1B | 9 | + |
| intron-exon | RPSAP52 | 12 | + | HMGA2 | 12 | + |
| exon-intron | TRAV12-2 | 14 | + | TRA | 14 | + |
| exon-exon | CAMKV | 3 | - | CABP1 | 12 | + |
| exon-exon | ABI2 | 2 | + | COX1 | MT | + |
| exon-exon | ABCC1 | 16 | + | ABCC6 | | - |
| intron-exon | SORT1 | 1 | - | KLHDC3 | 6 | + |
| exon-exon | ILF3 | 19 | - | ILF3 | 19 | + |
| exon-exon | COL1A1 | 17 | - | PDGFB | 22 | - |
| exon-exon | COL1A1 | 17 | - | PDGFB | 22 | - |
| intron-exon | LOC389765 | 9 | - | PSD | 10 | - |
| exon-exon | PPP1R12A | 12 | - | SEPTIN10 | 2 | - |
| exon-exon | NOTCH1 | 9 | - | NUP214 | 9 | + |
| exon-exon | DIDO1 | 20 | - | TTI1 | 20 | - |
| exon-exon | ACACA | 17 | - | STAC2 | 17 | - |
| exon-exon | ZMYND8 | 20 | - | CEP250 | 20 | + |
| exon-exon | RARA | 17 | + | PKIA | 8 | + |
| exon-exon | VAPB | 20 | + | IKZF3 | 17 | - |
| exon-exon | LAMP1 | 13 | + | MCF2L | 13 | + |
| exon-exon | RAB22A | 20 | + | MYO9B | 19 | + |
| exon-exon | GLB1 | 3 | - | CMTM7 | 3 | + |
| exon-exon | TBC1D31 | 8 | + | ZNF704 | 8 | - |
| exon-exon | BSG | 19 | + | NFIX | 19 | + |
| exon-exon | SKA2 | 17 | - | MYO19 | 17 | - |
| exon-exon | KIF2A | | + | PTPRC | 1 | + |
| exon-exon | DLAT | 11 | + | PIH1D2 | 11 | - |
| exon-exon | P2RX3 | | - | P2RX3 | | + |
| exon-exon | SYT13 | 11 | + | NPEPPS | 17 | + |
| exon-exon | RABGGTB | 1 | + | PCLO | 7 | - |
| intron-exon | LUC7L | 16 | + | ARHGEF1 | 19 | + |
| intron-exon | FUS | 16 | + | SLC25A53 | X | + |
| exon-intron | TRAV8-3 | 14 | + | TRA | 14 | + |
| exon-exon | NUPR2 | | - | PSPH | 7 | - |
| intron-exon | CDC73 | | - | PRKXP1 | 15 | - |
| exon-intron | NBPF20 | | - | PLPP1 | 5 | - |
| intron-exon | SOX5 | 12 | + | B3GALT2 | | - |
| exon-exon | TRAV9-2 | 14 | + | TRAJ45 | 14 | + |
| exon-exon | COL1A1 | 17 | - | PDGFB | 22 | - |
| exon-exon | COL1A1 | 17 | - | PDGFB | 22 | - |
| exon-exon | COL1A1 | 17 | - | PDGFB | 22 | - |
| exon-exon | COL1A1 | 17 | - | PDGFB | 22 | - |
| exon-exon | COL1A1 | 17 | - | PDGFB | 22 | - |
| exon-exon | COL1A1 | 17 | - | PDGFB | 22 | - |
| intron-exon | COL1A1 | 17 | - | PDGFB | 22 | - |
| exon-intron | COL1A1 | 17 | - | PDGFB | 22 | - |
| exon-intron | COL1A1 | 17 | - | PDGFB | 22 | - |
| exon-intron | COL1A1 | 17 | - | PDGFB | 22 | - |
| exon-intron | KMT2A | 11 | + | AFF1 | 4 | + |
| exon-exon | POM121 | 7 | + | ND1 | MT | + |
| exon-exon | TRGV9 | | - | TARP | | - |
| intron-exon | TRG | 7 | - | TARP | | - |
| exon-exon | TRGV9 | | - | TARP | | - |
| intron-exon | TRG | 7 | - | TARP | | - |
| exon-exon | IL2 | 4 | - | TNFRSF17 | 16 | + |
| exon-exon | UNC45B | 17 | + | EIF2AK1 | 7 | - |
| exon-intron | CNDP2 | 18 | - | CACNA1C | 12 | + |
| exon-exon | IGLV3-21 | 22 | + | IGLL5 | 22 | + |
| exon-intron | GOLGB1 | 3 | - | ANAPC1P2 | 2 | - |
| exon-intron | MYOT | 5 | + | LOC101928005 | 5 | - |
| exon-intron | ACBD3 | 1 | + | ACBD3-AS1 | 1 | + |
| exon-exon | CROCC | 1 | - | RBM5 | 3 | + |
| exon-exon | RNA45SN2 | 21 | + | PRKCD | 3 | + |
| exon-exon | TRAV29DV5 | 14 | + | TRAJ20 | 14 | + |
| intron-exon | TNC | 9 | + | TPM1 | 15 | + |
| exon-exon | TFIP11 | 22 | - | NDUFS3 | 11 | + |
| intron-exon | TTN-AS1 | 2 | + | TTN | 2 | - |
| intron-exon | LOC105372449 | 19 | + | MTF2 | 1 | + |
| exon-exon | MAPKAPK3 | 3 | + | MAPKAPK3 | 3 | - |
| exon-exon | SGCD | 5 | + | RFK | 9 | - |
| exon-exon | COLGALT1 | 19 | + | COLGALT1 | 19 | - |
| exon-exon | IDH2 | 15 | - | KIF1C | 17 | + |
| exon-exon | USO1 | 4 | + | USO1 | 4 | - |
| exon-intron | NORAD | 20 | - | UCP3 | 11 | - |
| exon-exon | RABEP1 | 17 | - | RABEP1 | 17 | + |
| exon-exon | MMS19 | 10 | + | NUCKS1 | 1 | - |
| exon-exon | PDLIM7 | 5 | + | PDLIM7 | 5 | - |
| exon-exon | XIST | X | - | NR1I3 | 1 | - |
| exon-exon | ETV6 | 12 | + | ABL1 | 9 | + |
| exon-exon | COMMD6 | 13 | + | TFRC | 3 | + |
| exon-exon | MSANTD4 | 11 | + | MTMR7 | 8 | - |
| exon-exon | FAM50A | X | - | HK2 | 2 | + |
| exon-exon | LMO7 | 13 | - | HLTF | 3 | - |
| intron-exon | TRAV12-1 | 14 | + | TRAJ44 | 14 | + |
| exon-intron | XGY2 | Y | + | LOC108178989 | Y | + |
| exon-exon | XGY2 | Y | + | SRY | | + |
| exon-intron | XGY2 | Y | + | RPS4Y1 | Y | + |
| exon-intron | XGY2 | Y | + | RPS4Y1 | Y | + |
| exon-exon | XGY2 | Y | + | RPS4Y1 | Y | + |
| exon-intron | CYBB | X | - | ADAM10 | 15 | - |
| intron-exon | IGH | 14 | - | IGHM | 14 | - |
| intron-exon | AC009336.2 | | - | HOXD1 | | - |
| intron-exon | IGK | 2 | + | IGKV3-15 | 2 | - |
| intron-exon | RIMS3 | 1 | + | NFYC | 1 | + |
| intron-exon | RIMS3 | 1 | + | NFYC | 1 | + |
| intron-exon | PARL | 3 | + | STAG2 | X | + |
| exon-exon | TRAV14DV4 | 14 | + | TRAJ54 | 14 | + |
| exon-exon | LOC105375470 | 7 | + | CCN1 | 1 | + |
| exon-exon | A1BG | 19 | + | A1BG-AS1 | 19 | + |
| exon-exon | A1BG | 19 | + | A1BG-AS1 | 19 | + |
| exon-exon | A1BG | 19 | + | A1BG-AS1 | 19 | + |
| exon-exon | A1BG | 19 | + | A1BG-AS1 | 19 | + |
| exon-exon | A1BG | 19 | + | A1BG-AS1 | 19 | + |
| exon-exon | A1BG-AS1 | 19 | - | A1BG | 19 | - |
| exon-exon | A1BG-AS1 | 19 | - | A1BG | 19 | - |
| exon-intron | A1CF | 10 | - | ANKDD1A | 15 | - |
| exon-intron | AADAT | 4 | + | LOC107986326 | 4 | + |
| exon-intron | AAK1 | 2 | + | ANXA4 | 2 | + |
| exon-intron | AAK1 | 2 | + | ANXA4 | 2 | + |
| intron-exon | AAMDC | 11 | + | INTS4P1 | 7 | - |
| intron-exon | AAMDC | 11 | + | INTS4P1 | 7 | - |
| exon-exon | AARS1 | 16 | - | HYDIN | 16 | - |
| exon-exon | AASS | 7 | + | EEF1A1P9 | 4 | + |
| intron-exon | ABCA13 | 7 | - | PKD1L1 | 7 | - |
| exon-intron | ABCA17P | 16 | - | IGFBP7-AS1 | 4 | + |
| exon-exon | ABCA5 | 17 | - | ABCA10 | 17 | - |
| exon-exon | ABCC11 | 16 | + | LONP2 | 16 | + |
| intron-exon | ABCC4 | 13 | + | ANKRD44 | 2 | + |
| exon-intron | ABCE1 | 4 | - | LOC105371664 | 1 | - |
| exon-exon | ABCF1-DT | 6 | - | PRR3 | 6 | - |
| exon-exon | ABCF1-DT | 6 | - | PRR3 | 6 | - |
| exon-exon | ABCF2-H2BE1 | 7 | - | ABCF2-H2BE1 | 7 | - |
| intron-exon | ABCG5 | 2 | - | DYNC2LI1 | 2 | - |
| intron-exon | ABCG5 | 2 | - | DYNC2LI1 | 2 | - |
| intron-exon | ABCG5 | 2 | - | DYNC2LI1 | 2 | - |
| intron-exon | ABCG5 | 2 | - | DYNC2LI1 | 2 | - |
| intron-exon | ABCG5 | 2 | - | DYNC2LI1 | 2 | - |
| intron-exon | ABCG5 | 2 | - | DYNC2LI1 | 2 | - |
| intron-exon | ABCG5 | 2 | - | DYNC2LI1 | 2 | - |
| intron-exon | ABHD12 | 20 | - | PYGB | 20 | - |
| intron-exon | ABHD12 | 20 | - | PYGB | 20 | - |
| intron-exon | ABHD12 | 20 | - | PYGB | 20 | - |
| intron-exon | ABHD12 | 20 | - | PYGB | 20 | - |
| intron-exon | ABHD12 | 20 | - | PYGB | 20 | - |
| intron-exon | ABHD12 | 20 | - | PYGB | 20 | - |
| intron-exon | ABHD12 | 20 | - | PYGB | 20 | - |
| intron-exon | ABHD12 | 20 | - | PYGB | 20 | - |
| intron-exon | ABHD12 | 20 | - | PYGB | 20 | - |
| intron-exon | ABHD12 | 20 | - | PYGB | 20 | - |
| exon-exon | ABHD14A | 3 | + | ACY1 | 3 | + |
| exon-exon | ABHD14A | 3 | + | ACY1 | 3 | + |
| intron-exon | ABHD14B | 3 | + | ABHD14A-ACY1 | 3 | + |
| exon-exon | ABHD14B | 3 | - | PCBP4 | 3 | - |
| exon-exon | ABHD14B | 3 | - | TMEM231 | 16 | - |
| exon-exon | ABHD15 | 17 | + | TP53I13 | 17 | + |
| exon-exon | ABHD15 | 17 | + | TP53I13 | 17 | + |
| exon-intron | ABHD16A | 6 | + | AGO1 | 1 | - |
| exon-intron | ABHD16A | 6 | + | LOC105375018 | 6 | + |
| exon-exon | ABHD17A | 19 | - | ABHD17AP1 | 1 | + |
| exon-exon | ABHD17C | 15 | + | BCL2A1 | 15 | - |
| exon-exon | ABHD17C | 15 | + | BCL2A1 | 15 | - |
| exon-exon | ABHD17C | 15 | + | BCL2A1 | 15 | - |
| exon-intron | ABHD5 | 3 | - | SYNE1 | 6 | - |
| intron-exon | ABHD8 | 19 | + | MRPL34 | 19 | + |
| intron-exon | ABL1 | 9 | + | NRXN2 | 11 | + |
| exon-exon | ABL2 | 1 | + | ND5 | MT | - |
| exon-exon | ABRAXAS1 | 4 | - | MRPS18C | 4 | - |
| exon-exon | ABRAXAS1 | 4 | - | MRPS18C | 4 | - |
| exon-exon | ABRAXAS1 | 4 | - | MRPS18C | 4 | - |
| exon-exon | ABRAXAS1 | 4 | - | MRPS18C | 4 | - |
| exon-exon | ABRAXAS1 | 4 | - | MRPS18C | 4 | - |
| exon-exon | ABRAXAS1 | 4 | - | MRPS18C | 4 | - |
| exon-exon | ABRAXAS1 | 4 | - | MRPS18C | 4 | - |
| exon-exon | ABRAXAS1 | 4 | - | MRPS18C | 4 | - |
| exon-exon | ABRAXAS1 | 4 | - | MRPS18C | 4 | - |
| exon-exon | ABRAXAS1 | 4 | - | MRPS18C | 4 | - |
| exon-exon | ABRAXAS1 | 4 | - | MRPS18C | 4 | - |
| exon-exon | ABRAXAS1 | 4 | - | MRPS18C | 4 | - |
| exon-exon | ABRAXAS1 | 4 | - | MRPS18C | 4 | - |
| exon-exon | ABRAXAS1 | 4 | - | MRPS18C | 4 | - |
| exon-exon | ABRAXAS1 | 4 | - | MRPS18C | 4 | - |
| intron-exon | ABRAXAS1 | 4 | - | MRPS18C | 4 | - |
| intron-exon | AC002091.1 | 17 | - | CTB-41I6.1 | 17 | - |
| intron-exon | AC002451.1 | 7 | - | LOC107986824 | 7 | - |
| intron-exon | AC002519.2 | 16 | + | VN1R3 | 16 | + |
| intron-exon | AC004980.2 | 7 | - | POMZP3 | 7 | - |
| intron-exon | AC004980.3 | 7 | - | UPK3B | 7 | - |
| intron-exon | AC004980.3 | 7 | - | UPK3B | 7 | - |
| intron-exon | AC004980.3 | 7 | - | UPK3B | 7 | - |
| intron-exon | AC004980.3 | 7 | - | UPK3B | 7 | - |
| intron-exon | AC004980.3 | 7 | - | UPK3B | 7 | - |
| intron-exon | AC004980.3 | 7 | - | UPK3B | 7 | - |
| intron-exon | AC004980.3 | 7 | - | UPK3B | 7 | - |
| intron-exon | AC004980.3 | 7 | - | UPK3B | 7 | - |
| intron-exon | AC005050.3 | 7 | + | CTB-30L5.1 | 7 | + |
| intron-exon | AC005077.2 | 7 | - | GTF2IP7 | 7 | - |
| intron-exon | AC005674.2 | 4 | - | SLC2A9 | 4 | - |
| intron-exon | AC005697.2 | 17 | + | LYRM9 | 17 | + |
| intron-exon | AC007128.1 | 7 | - | LOC100505938 | 7 | - |
| intron-exon | AC008050.1 | 14 | + | ACTG1 | 17 | - |
| intron-exon | AC008083.1 | 12 | - | LOC105369746 | 12 | - |
| intron-exon | AC008736.1 | 19 | + | NUDT19 | 19 | + |
| intron-exon | AC008758.3 | 19 | - | LOC112268242 | 19 | - |
| intron-exon | AC008758.4 | 19 | - | LOC112268242 | 19 | - |
| intron-exon | AC008758.4 | 19 | - | LOC112268242 | 19 | - |
| intron-exon | AC008758.4 | 19 | - | LOC112268242 | 19 | - |
| intron-exon | AC008764.2 | 19 | + | SMIM7 | 19 | + |
| intron-exon | AC008771.1 | 5 | - | ZFYVE16 | 5 | - |
| intron-exon | AC008771.1 | 5 | - | ZFYVE16 | 5 | - |
| intron-exon | AC008771.1 | 5 | - | ZFYVE16 | 5 | - |
| intron-exon | AC008771.1 | 5 | - | ZFYVE16 | 5 | - |
| intron-exon | AC008771.1 | 5 | - | ZFYVE16 | 5 | - |
| intron-exon | AC008771.1 | 5 | - | ZFYVE16 | 5 | - |
| intron-exon | AC008771.1 | 5 | - | ZFYVE16 | 5 | - |
| intron-exon | AC008771.1 | 5 | - | ZFYVE16 | 5 | - |
| intron-exon | AC008878.1 | 19 | + | ZNF358 | 19 | + |
| intron-exon | AC008915.2 | 16 | - | COG7 | 16 | - |
| intron-exon | AC009088.1 | 16 | - | RAPGEF3 | 12 | + |
| intron-exon | AC009511.2 | 12 | + | KLHL42 | 12 | + |
| intron-exon | AC009567.1 | 4 | + | LOC105377500 | 4 | + |
| intron-exon | AC009899.1 | 18 | - | CELF4 | 18 | - |
| intron-exon | AC009899.1 | 18 | - | CELF4 | 18 | - |
| intron-exon | AC009899.1 | 18 | - | CELF4 | 18 | - |
| intron-exon | AC010148.1 | 2 | - | LOC101927896 | 2 | - |
| intron-exon | AC010149.1 | 2 | + | LOC112268431 | 2 | + |
| intron-exon | AC010522.1 | 19 | - | ZNF587B | 19 | - |
| intron-exon | AC011005.1 | 7 | - | LOC407835 | 7 | - |
| intron-exon | AC011483.2 | 19 | - | KLK5 | 19 | - |
| intron-exon | AC012254.2 | 18 | - | HDHD2 | 18 | - |
| intron-exon | AC016590.1 | 19 | - | LOC284412 | 19 | - |
| intron-exon | AC016590.1 | 19 | - | LOC284412 | 19 | - |
| intron-exon | AC018755.16 | 19 | + | LOC339352 | 19 | + |
| intron-exon | AC020904.2 | 19 | + | CSP3 | 19 | + |
| intron-exon | AC020904.2 | 19 | - | JAK3 | 19 | - |
| intron-exon | AC020910.5 | 19 | - | SCGB1B2P | 19 | - |
| intron-exon | AC020910.5 | 19 | - | SCGB1B2P | 19 | - |
| intron-exon | AC020910.5 | 19 | - | SCGB1B2P | 19 | - |
| intron-exon | AC020910.5 | 19 | - | SCGB1B2P | 19 | - |
| intron-exon | AC020910.5 | 19 | - | SCGB1B2P | 19 | - |
| intron-exon | AC020910.5 | 19 | - | SCGB1B2P | 19 | - |
| intron-exon | AC020910.5 | 19 | - | SCGB1B2P | 19 | - |
| intron-exon | AC022210.2 | 2 | - | LOC105374838 | 2 | - |
| intron-exon | AC022509.1 | 12 | - | SSPN | 12 | - |
| intron-exon | AC022523.1 | 15 | - | LOC105371009 | 15 | - |
| intron-exon | AC023137.1 | 2 | + | NBPF1 | 1 | - |
| intron-exon | AC023355.1 | 15 | - | LOC107984757 | 15 | - |
| intron-exon | AC023355.1 | 15 | - | LOC107984757 | 15 | - |
| intron-exon | AC024270.2 | 15 | - | NCL | 2 | - |
| intron-exon | AC024560.3 | 3 | - | PRRC2A | 6 | - |
| intron-exon | AC024560.3 | 3 | - | PRRC2A | 6 | - |
| intron-exon | AC026271.4 | 17 | - | LOC645139 | 17 | - |
| intron-exon | AC026271.4 | 17 | - | LOC645139 | 17 | - |
| intron-exon | AC026271.4 | 17 | - | LOC645139 | 17 | - |
| intron-exon | AC026271.4 | 17 | - | LOC645139 | 17 | - |
| intron-exon | AC026271.4 | 17 | - | LOC645139 | 17 | - |
| intron-exon | AC026271.4 | 17 | - | LOC645139 | 17 | - |
| intron-exon | AC026271.4 | 17 | - | LOC645139 | 17 | - |
| intron-exon | AC026271.4 | 17 | - | LOC645139 | 17 | - |
| intron-exon | AC026271.4 | 17 | - | LOC645139 | 17 | - |
| intron-exon | AC026271.4 | 17 | - | LOC645139 | 17 | - |
| intron-exon | AC026271.4 | 17 | - | LOC645139 | 17 | - |
| intron-exon | AC026271.4 | 17 | - | LOC645139 | 17 | - |
| intron-exon | AC026271.4 | 17 | - | LOC645139 | 17 | - |
| intron-exon | AC026271.4 | 17 | - | LOC645139 | 17 | - |
| intron-exon | AC026271.4 | 17 | - | LOC645139 | 17 | - |
| intron-exon | AC026271.4 | 17 | - | LOC645139 | 17 | - |
| intron-exon | AC026271.4 | 17 | - | LOC645139 | 17 | - |
| intron-exon | AC026271.4 | 17 | - | LOC645139 | 17 | - |
| intron-exon | AC026271.4 | 17 | - | LOC645139 | 17 | - |
| intron-exon | AC026271.4 | 17 | - | LOC645139 | 17 | - |
| intron-exon | AC026271.4 | 17 | - | LOC645139 | 17 | - |
| intron-exon | AC026271.4 | 17 | - | LOC645139 | 17 | - |
| intron-exon | AC026271.4 | 17 | - | LOC645139 | 17 | - |
| intron-exon | AC026271.4 | 17 | - | LOC645139 | 17 | - |
| intron-exon | AC026271.4 | 17 | - | LOC645139 | 17 | - |
| intron-exon | AC026271.4 | 17 | - | LOC645139 | 17 | - |
| intron-exon | AC062037.3 | 2 | + | SH2D6 | 2 | + |
| intron-exon | AC068533.4 | 7 | - | ASL | 7 | - |
| intron-exon | AC069368.1 | 15 | - | LOC613038 | 16 | + |
| intron-exon | AC073270.2 | 7 | + | LOC105375321 | 7 | + |
| intron-exon | AC073928.2 | 2 | - | PSMG3 | 7 | - |
| intron-exon | AC073928.2 | 2 | - | PSMG3 | 7 | - |
| intron-exon | AC078846.1 | 7 | + | LAMP2 | X | - |
| intron-exon | AC078882.1 | 2 | - | LRP1B | 2 | - |
| intron-exon | AC079362.1 | 12 | - | UQCRFS1 | 19 | + |
| intron-exon | AC083967.1 | 8 | + | LOC107986951 | 8 | + |
| intron-exon | AC084855.1 | 15 | + | ADAMTS17 | 15 | + |
| intron-exon | AC084866.1 | 4 | + | MFAP3L | 4 | + |
| intron-exon | AC087289.3 | 17 | - | MRPL38 | 17 | - |
| intron-exon | AC087863.2 | 12 | - | LOC105370018 | 12 | - |
| intron-exon | AC090518.1 | 15 | - | LOC105370832 | 15 | - |
| intron-exon | AC090518.1 | 15 | - | LOC105370832 | 15 | - |
| intron-exon | AC090618.1 | 17 | - | PCTP | 17 | - |
| intron-exon | AC091045.1 | 15 | + | CCDC32 | 15 | + |
| intron-exon | AC092017.3 | 1 | - | KCNH1 | 1 | - |
| intron-exon | AC092155.1 | 2 | - | TMEM17 | 2 | - |
| intron-exon | AC093627.1 | 7 | - | LOC105375113 | 7 | - |
| intron-exon | AC097451.1 | 4 | - | LOC105374433 | 4 | - |
| intron-exon | AC098679.5 | 4 | - | TMEM144 | 4 | - |
| intron-exon | AC098934.1 | 1 | + | TUBA5P | 1 | + |
| intron-exon | AC105052.1 | 7 | - | RASA4 | 7 | - |
| intron-exon | AC105105.2 | 18 | - | LOC107985182 | 18 | - |
| intron-exon | AC105233.5 | 8 | + | ZNF71-SMIM17 | 19 | - |
| intron-exon | AC106791.3 | 5 | + | LOC107986369 | 5 | + |
| intron-exon | AC107871.2 | 15 | + | FEM1B | 15 | + |
| intron-exon | AC108693.2 | 3 | + | ATP6V1A | 3 | + |
| intron-exon | AC112220.2 | 3 | - | LOC105377023 | 3 | - |
| intron-exon | AC114763.1 | 2 | + | LOC105373637 | 2 | + |
| intron-exon | AC117460.1 | 3 | + | LOC105373996 | 3 | + |
| intron-exon | AC125494.1 | 12 | + | ZNF384 | 12 | + |
| intron-exon | AC126323.1 | 15 | + | GOLGA2P11 | 15 | + |
| intron-exon | AC131025.3 | 5 | - | AFAP1L1 | 5 | - |
| intron-exon | AC131392.1 | 5 | + | GUSBP13 | 5 | + |
| intron-exon | AC133548.2 | 16 | - | LOC390705 | 16 | - |
| intron-exon | AC133548.2 | 16 | - | LOC390705 | 16 | - |
| intron-exon | AC133548.2 | 16 | - | LOC390705 | 16 | - |
| intron-exon | AC133548.2 | 16 | - | LOC390705 | 16 | - |
| intron-exon | AC133548.2 | 16 | - | LOC390705 | 16 | - |
| intron-exon | AC133548.2 | 16 | - | LOC390705 | 16 | - |
| intron-exon | AC138915.1 | 16 | + | CISD2 | 4 | - |
| intron-exon | AC139495.1 | 5 | + | NAIPP3 | 5 | + |
| intron-exon | AC140725.1 | 15 | + | WASHC1 | 9 | - |
| intron-exon | AC145343.1 | 17 | - | FBXO36P1 | 17 | - |
| intron-exon | AC211476.3 | 7 | - | PMS2P8 | 7 | - |
| intron-exon | AC211476.3 | 7 | - | PMS2P8 | 7 | - |
| intron-exon | AC211476.4 | 7 | + | SPDYE9 | 7 | + |
| intron-exon | AC211476.5 | 7 | - | NUDC | 1 | - |
| intron-exon | AC211476.5 | 7 | - | PMS2P8 | 7 | - |
| intron-exon | AC211486.3 | 7 | - | PMS2P8 | 7 | + |
| intron-exon | AC226101.1 | 2 | - | RGPD6 | 2 | - |
| intron-exon | AC226119.2 | 4 | + | LOC100420818 | 4 | + |
| intron-exon | AC244035.2 | 1 | + | FAM72A | 1 | + |
| intron-exon | AC244205.1 | 2 | + | TTC19 | 17 | - |
| intron-exon | AC245297.3 | 1 | + | LOC100996723 | 1 | - |
| intron-exon | AC245297.3 | 1 | + | LOC653513 | 1 | + |
| intron-exon | AC245297.3 | 1 | + | PDE4DIP | 1 | - |
| intron-exon | AC245884.12 | 19 | + | LILRA4 | 19 | + |
| exon-intron | ACAA2 | 18 | + | SNHG22 | 18 | + |
| exon-exon | ACAA2 | 18 | - | LOC100420869 | X | - |
| exon-exon | ACAA2 | 18 | - | LOC100420869 | X | - |
| intron-exon | ACAD10 | 12 | + | PKD1L1 | 7 | - |
| exon-exon | ACAD9 | 3 | + | CFAP92 | 3 | + |
| exon-intron | ACADM | 1 | + | RABGGTB | 1 | + |
| exon-intron | ACADM | 1 | + | RABGGTB | 1 | + |
| exon-exon | ACADM | 1 | - | DLST | 14 | + |
| exon-exon | ACAT2 | 6 | - | SOD2 | 6 | - |
| intron-exon | ACBD3 | 1 | + | ACBD3-AS1 | 1 | + |
| exon-intron | ACBD3 | 1 | + | ACBD3-AS1 | 1 | + |
| intron-exon | ACBD4 | 17 | - | PLCD3 | 17 | - |
| intron-exon | ACBD4 | 17 | - | PLCD3 | 17 | - |
| exon-exon | ACBD5 | 10 | + | LRRC37A6P | 10 | + |
| intron-exon | ACBD5 | 10 | - | MASTL | 10 | - |
| intron-exon | ACBD5 | 10 | - | MASTL | 10 | - |
| intron-exon | ACBD5 | 10 | - | MASTL | 10 | - |
| exon-exon | ACBD7-DCLRE1CP1 | 10 | - | ACBD7-DCLRE1CP1 | 10 | - |
| exon-exon | ACBD7-DCLRE1CP1 | 10 | - | ACBD7-DCLRE1CP1 | 10 | - |
| exon-exon | ACBD7-DCLRE1CP1 | 10 | - | ACBD7-DCLRE1CP1 | 10 | - |
| exon-intron | ACE | 17 | + | ACE3P | 17 | + |
| intron-exon | ACE2 | X | + | BMX | X | + |
| intron-exon | ACIN1 | 14 | + | C14orf119 | 14 | + |
| exon-exon | ACKR2 | 3 | + | KRBOX1 | 3 | + |
| exon-intron | ACKR2 | 3 | + | KRBOX1 | 3 | + |
| intron-exon | ACO2 | 22 | - | LOC343508 | 1 | - |
| intron-exon | ACOT12 | 5 | - | ZCCHC9 | 5 | - |
| intron-exon | ACOT12 | 5 | - | ZCCHC9 | 5 | - |
| intron-exon | ACOT12 | 5 | - | ZCCHC9 | 5 | - |
| intron-exon | ACOT12 | 5 | - | ZCCHC9 | 5 | - |
| intron-exon | ACOT12 | 5 | - | ZCCHC9 | 5 | - |
| exon-intron | ACOT2 | 14 | - | HEATR4 | 14 | - |
| exon-exon | ACOXL | 2 | + | BCL2L11 | 2 | + |
| intron-exon | ACP1 | 2 | - | SH3YL1 | 2 | - |
| exon-exon | ACP2 | 11 | - | DDB2 | 11 | - |
| exon-intron | ACP5 | 19 | + | ZNF627 | 19 | + |
| exon-intron | ACP5 | 19 | + | ZNF627 | 19 | + |
| exon-intron | ACP5 | 19 | + | ZNF627 | 19 | + |
| exon-intron | ACP5 | 19 | + | ZNF627 | 19 | + |
| exon-intron | ACP5 | 19 | + | ZNF627 | 19 | + |
| exon-intron | ACP5 | 19 | + | ZNF627 | 19 | + |
| exon-intron | ACP5 | 19 | + | ZNF627 | 19 | + |
| exon-intron | ACP5 | 19 | + | ZNF627 | 19 | + |
| exon-intron | ACP5 | 19 | + | ZNF627 | 19 | + |
| intron-exon | ACRV1 | 11 | - | CHEK1 | 11 | - |
| intron-exon | ACRV1 | 11 | - | CHEK1 | 11 | - |
| exon-exon | ACSBG1 | 15 | - | IDH3A | 15 | - |
| exon-exon | ACSM3 | 16 | + | LINC01541 | 18 | - |
| exon-intron | ACTB | 7 | - | ZNF367 | 9 | + |
| exon-intron | ACTB | 7 | - | AP000446.1 | 11 | - |
| exon-exon | ACTB | 7 | - | DDTL | 22 | + |
| exon-intron | ACTB | 7 | - | GPI | 19 | - |
| exon-intron | ACTB | 7 | - | ADGB | 6 | + |
| exon-intron | ACTB | 7 | - | CFAP54 | 12 | + |
| exon-exon | ACTB | 7 | - | RNA45SN1 | 21 | + |
| exon-exon | ACTB | 7 | - | RPS16 | 19 | - |
| exon-exon | ACTB | 7 | - | RPS16 | 19 | - |
| exon-exon | ACTB | 7 | - | BSG | 19 | + |
| intron-exon | ACTB | 7 | - | FBXL18 | 7 | - |
| exon-intron | ACTC1 | 15 | - | LOC101928174 | 15 | - |
| exon-intron | ACTC1 | 15 | - | LOC101928174 | 15 | - |
| exon-intron | ACTC1 | 15 | - | LOC101928174 | 15 | - |
| exon-intron | ACTC1 | 15 | - | LOC101928174 | 15 | - |
| exon-intron | ACTC1 | 15 | - | LOC101928174 | 15 | - |
| exon-intron | ACTC1 | 15 | - | LOC101928174 | 15 | - |
| exon-exon | ACTG1 | 17 | + | ACTG1 | 17 | - |
| exon-intron | ACTG1 | 17 | - | EIF3CL | 16 | + |
| exon-exon | ACTG1 | 17 | - | MYB | 6 | - |
| exon-exon | ACTG1 | 17 | - | MYB | 6 | - |
| exon-exon | ACTG2 | 2 | - | ACTB | 7 | + |
| exon-intron | ACTN1 | 14 | - | PTPRD | 9 | + |
| intron-exon | ACTN4 | 19 | - | ZSCAN4 | 19 | - |
| exon-exon | ACTN4 | 19 | - | ACTN4 | 19 | + |
| exon-intron | ACTN4P1 | 4 | - | LOC107985291 | 19 | - |
| exon-intron | ACTR2 | 2 | + | LOC107984532 | 12 | + |
| intron-exon | ACTR3 | 2 | - | XIST | X | - |
| exon-exon | ACTR3 | 2 | - | RPS6KA3 | X | + |
| exon-exon | ACTR3B | 7 | + | ACTR3C | 7 | - |
| intron-exon | ACTR3C | 7 | + | LOC100134040 | 7 | + |
| intron-exon | ACTR3C | 7 | + | LOC100134040 | 7 | + |
| intron-exon | ACTR3C | 7 | + | LOC100134040 | 7 | + |
| exon-exon | ACTR8 | 3 | - | IL17RB | 3 | - |
| intron-exon | ACYP1 | 14 | + | ZC2HC1C | 14 | + |
| intron-exon | AD000090.1 | 19 | + | RNA45SN2 | 21 | + |
| exon-intron | ADA | 20 | + | LOC107303343 | 20 | + |
| exon-exon | ADAL | 15 | - | LCMT2 | 15 | - |
| exon-exon | ADAL | 15 | - | LCMT2 | 15 | - |
| intron-exon | ADAM12 | 10 | - | FOXO3 | 6 | + |
| exon-exon | ADAM29 | 4 | + | LOC101928551 | 4 | + |
| intron-exon | ADAMTS12 | 5 | + | SNAP25 | 20 | + |
| exon-exon | ADAMTS4 | 1 | + | ADAMTS4 | 1 | - |
| exon-exon | ADAMTS4 | 1 | + | ADAMTS4 | 1 | - |
| intron-exon | ADAMTS4 | 1 | + | NDUFS2 | 1 | + |
| exon-intron | ADAT1 | 16 | + | CPHXL | 16 | + |
| exon-intron | ADAT1 | 16 | - | AC025287.1 | 16 | - |
| exon-exon | ADCK2 | 7 | - | DENND2A | 7 | - |
| exon-intron | ADCY3 | 2 | - | CENPO | 2 | - |
| exon-intron | ADCY3 | 2 | - | CENPO | 2 | - |
| exon-intron | ADD2 | 2 | + | LOC105374794 | 2 | + |
| exon-intron | ADD2 | 2 | + | LOC105374794 | 2 | + |
| exon-exon | ADD2 | 2 | - | PLEKHA2 | 8 | + |
| exon-exon | ADD3 | 10 | - | ADD3-AS1 | 10 | - |
| intron-exon | ADGB | 6 | - | KATNBL1P6 | 6 | - |
| intron-exon | ADGB | 6 | - | KATNBL1P6 | 6 | - |
| intron-exon | ADGRB3 | 6 | + | ALOXE3 | 17 | - |
| exon-exon | ADGRF3 | 2 | - | LOC105374334 | 2 | - |
| exon-intron | ADGRG1 | 16 | + | GNG12-AS1 | 1 | - |
| exon-intron | ADHFE1 | 8 | + | AC009879.3 | 8 | + |
| exon-exon | ADHFE1 | 8 | + | VXN | 8 | + |
| exon-intron | ADHFE1 | 8 | - | LOC102724687 | 8 | - |
| exon-intron | ADHFE1 | 8 | - | LOC102724687 | 8 | - |
| intron-exon | ADIPOQ-AS1 | 3 | - | PCNT | 21 | - |
| intron-exon | ADIPOQ-AS1 | 3 | - | PCNT | 21 | - |
| exon-intron | ADORA2B | 17 | - | CA5AP1 | 16 | - |
| exon-exon | ADPGK | 15 | + | ADPGK | 15 | - |
| exon-exon | ADPGK-AS1 | 15 | - | ADPGK | 15 | - |
| intron-exon | ADPRM | 17 | - | SCO1 | 17 | - |
| exon-intron | ADSL | 22 | + | SGSM3 | 22 | + |
| exon-exon | ADSL | 22 | + | SGSM3 | 22 | + |
| exon-intron | ADSL | 22 | - | CASC15 | 6 | - |
| intron-exon | AEBP2 | 12 | - | RN7SL4P | 3 | + |
| exon-exon | AFDN | 6 | - | TMEM151B | 6 | - |
| exon-exon | AFF1 | 4 | + | UBE2D3 | 4 | - |
| exon-exon | AFF1 | 4 | + | KMT2A | 11 | + |
| intron-exon | AFF1 | 4 | + | KMT2A | 11 | + |
| exon-exon | AFF1 | 4 | - | AFF1-AS1 | 4 | - |
| exon-exon | AFF1 | 4 | - | AFF1-AS1 | 4 | - |
| exon-intron | AFF1 | 4 | - | AFF1-AS1 | 4 | - |
| exon-intron | AFF1-AS1 | 4 | + | AFF1 | 4 | + |
| intron-exon | AFG3L2 | 18 | - | TUBB6 | 18 | - |
| intron-exon | AFG3L2 | 18 | - | TUBB6 | 18 | - |
| exon-exon | AGAP11 | 10 | - | MMRN2 | 10 | - |
| exon-intron | AGAP11 | 10 | - | MMRN2 | 10 | - |
| exon-exon | AGAP11 | 10 | - | MMRN2 | 10 | - |
| exon-intron | AGAP11 | 10 | - | MMRN2 | 10 | - |
| exon-intron | AGAP11 | 10 | - | MMRN2 | 10 | - |
| exon-intron | AGAP11 | 10 | - | MMRN2 | 10 | - |
| exon-intron | AGAP11 | 10 | - | MMRN2 | 10 | - |
| exon-intron | AGAP11 | 10 | - | MMRN2 | 10 | - |
| exon-intron | AGAP11 | 10 | - | MMRN2 | 10 | - |
| exon-intron | AGAP11 | 10 | - | MMRN2 | 10 | - |
| exon-intron | AGAP11 | 10 | - | MMRN2 | 10 | - |
| exon-intron | AGAP11 | 10 | - | MMRN2 | 10 | - |
| exon-intron | AGAP11 | 10 | - | MMRN2 | 10 | - |
| exon-intron | AGAP11 | 10 | - | MMRN2 | 10 | - |
| exon-intron | AGAP11 | 10 | - | MMRN2 | 10 | - |
| exon-intron | AGAP11 | 10 | - | MMRN2 | 10 | - |
| exon-exon | AGAP11 | 10 | - | MMRN2 | 10 | - |
| exon-intron | AGAP11 | 10 | - | MMRN2 | 10 | - |
| exon-intron | AGAP11 | 10 | - | MMRN2 | 10 | - |
| exon-intron | AGAP11 | 10 | - | MMRN2 | 10 | - |
| exon-exon | AGAP11 | 10 | - | MMRN2 | 10 | - |
| exon-intron | AGAP2 | 12 | + | TSPAN31 | 12 | + |
| intron-exon | AGAP2 | 12 | + | TSPAN31 | 12 | + |
| intron-exon | AGAP7P | 10 | - | XG | X | - |
| intron-exon | AGBL5 | 2 | + | OST4 | 2 | + |
| intron-exon | AGBL5 | 2 | - | OST4 | 2 | - |
| exon-intron | AGO1 | 1 | + | AGO3 | 1 | + |
| exon-intron | AGO1 | 1 | - | ABCC3 | 17 | - |
| exon-exon | AGPAT4 | 6 | - | AGPAT4 | 6 | + |
| exon-intron | AGPAT5 | 8 | + | MICALL1 | 22 | - |
| exon-exon | AHCY | 20 | - | EIF3C | 16 | + |
| exon-intron | AHNAK | 11 | + | FBXL17 | 5 | + |
| exon-intron | AHNAK | 11 | + | GRIA3 | X | - |
| exon-intron | AHR | 7 | + | MACROD2 | 20 | + |
| intron-exon | AHRR | 5 | - | PDCD6 | 5 | - |
| intron-exon | AHRR | 5 | - | PDCD6 | 5 | - |
| intron-exon | AHRR | 5 | - | LOC728613 | 5 | + |
| exon-intron | AHSG | 3 | + | ELP2 | 18 | - |
| exon-exon | AIFM2 | 10 | + | TYSND1 | 10 | + |
| intron-exon | AIFM2 | 10 | + | TYSND1 | 10 | + |
| exon-exon | AIFM2 | 10 | - | NQO1 | 16 | - |
| exon-exon | AIFM3 | 22 | + | LZTR1 | 22 | + |
| intron-exon | AIMP1 | 4 | - | TBCK | 4 | - |
| intron-exon | AIP | 11 | - | TMEM134 | 11 | - |
| intron-exon | AIP | 11 | - | TMEM134 | 11 | - |
| exon-exon | AJM1 | 9 | + | PHPT1 | 9 | + |
| exon-exon | AK1 | 9 | + | ST6GALNAC6 | 9 | + |
| exon-exon | AK2 | 1 | + | AK2P1 | 1 | + |
| exon-exon | AK2 | 1 | + | AK2P1 | 1 | + |
| intron-exon | AK2 | 1 | - | LOC100419257 | 1 | - |
| exon-intron | AK4 | 1 | + | NF1 | 17 | + |
| exon-exon | AK7 | 14 | + | ARSB | 5 | + |
| exon-exon | AK9 | 6 | - | LOC105377935 | 6 | - |
| exon-intron | AKAP12 | 6 | - | MED12 | X | + |
| intron-exon | AKAP14 | X | + | NKAP | X | + |
| exon-exon | AKAP9 | 7 | + | TRPS1 | 8 | - |
| exon-intron | AKAP9 | 7 | + | ANKIB1 | 7 | + |
| exon-intron | AKIP1 | 11 | + | C11orf16 | 11 | + |
| exon-intron | AKIP1 | 11 | - | DENND2B | 11 | - |
| intron-exon | AKR1A1 | 1 | - | MED20 | 6 | - |
| exon-intron | AKR1B10 | 7 | + | NRIP1 | 21 | + |
| exon-exon | AKR1C1 | 10 | + | AKR1C3 | 10 | + |
| exon-exon | AKR1C1 | 10 | - | AKR1C2 | 10 | + |
| exon-intron | AKR1C2 | 10 | + | LOC101928051 | 10 | + |
| exon-intron | AKR1C2 | 10 | + | LOC101928051 | 10 | + |
| intron-exon | AKR1C3 | 10 | - | AKR1C2 | 10 | + |
| exon-exon | AKR1C3 | 10 | - | AKR1C1 | 10 | - |
| intron-exon | AKR1C6P | 10 | - | AKR1E2 | 10 | - |
| intron-exon | AKT1S1 | 19 | + | TBC1D17 | 19 | + |
| exon-intron | AKT3 | 1 | - | PITRM1 | 10 | + |
| exon-exon | AKT3 | 1 | - | SDCCAG8 | 1 | - |
| exon-exon | AKT3 | 1 | - | SDCCAG8 | 1 | - |
| exon-exon | AKT3 | 1 | - | SDCCAG8 | 1 | - |
| intron-exon | AL021918.5 | 6 | - | ZNF184 | 6 | - |
| intron-exon | AL031282.1 | 1 | + | SLC35E2A | 1 | + |
| intron-exon | AL031584.3 | X | - | LOC100128442 | X | - |
| intron-exon | AL049780.3 | 14 | - | EIF2B2 | 14 | - |
| intron-exon | AL050349.1 | 20 | + | ZNF341 | 20 | + |
| intron-exon | AL121906.1 | 20 | - | NECAB3 | 20 | - |
| intron-exon | AL136140.2 | 6 | - | LOC105375075 | 6 | - |
| intron-exon | AL136295.1 | 14 | + | ZNF587B | 19 | + |
| intron-exon | AL136981.1 | 9 | - | LOC642943 | 9 | - |
| intron-exon | AL139339.1 | 10 | - | CALHM2 | 10 | - |
| intron-exon | AL157834.2 | 10 | - | LOC107984257 | 10 | - |
| intron-exon | AL157834.2 | 10 | - | LOC107984257 | 10 | - |
| intron-exon | AL158038.1 | 13 | - | DCAF7 | 17 | + |
| intron-exon | AL158151.1 | 9 | + | LOC105376289 | 9 | + |
| intron-exon | AL158828.1 | 9 | - | LOC102724080 | 9 | - |
| intron-exon | AL162411.1 | 9 | + | RNF2P1 | 9 | + |
| intron-exon | AL162411.1 | 9 | - | RNF2P1 | 9 | - |
| intron-exon | AL162411.1 | 9 | - | RNF2P1 | 9 | - |
| intron-exon | AL353151.2 | 9 | - | AK3 | 9 | - |
| intron-exon | AL353743.1 | 9 | - | LOC389765 | 9 | - |
| intron-exon | AL353748.3 | 9 | + | SPIN1 | 9 | + |
| intron-exon | AL354707.1 | 9 | + | KDM4C | 9 | + |
| intron-exon | AL360268.2 | 9 | + | RASSF6 | 4 | - |
| intron-exon | AL391883.1 | 1 | - | RNF186 | 1 | - |
| intron-exon | AL392023.2 | 14 | - | LOC105370456 | 14 | - |
| intron-exon | AL392185.1 | 9 | - | LOC105376158 | 9 | - |
| intron-exon | AL442067.3 | 13 | + | RAP2A | 13 | + |
| intron-exon | AL512328.1 | 1 | - | AGT | 1 | - |
| intron-exon | AL512353.1 | 1 | - | ERMAP | 1 | - |
| intron-exon | AL512658.1 | 6 | + | LOC105378073 | 6 | + |
| intron-exon | AL513314.1 | 1 | - | ZBBX | 3 | - |
| intron-exon | AL645941.2 | 6 | - | HLA-DMB | 6 | - |
| intron-exon | AL732372.2 | 1 | - | LOC100132062 | 5 | + |
| intron-exon | AL928654.7 | 14 | - | CRIP1 | 14 | - |
| exon-exon | ALAD | 9 | - | ESRP2 | 16 | - |
| exon-intron | ALB | 4 | + | HDHD5 | 22 | - |
| exon-intron | ALB | 4 | + | WWOX | 16 | - |
| exon-intron | ALB | 4 | + | AC092364.1 | 19 | + |
| exon-intron | ALB | 4 | + | ADGRG2 | X | - |
| exon-intron | ALB | 4 | + | CUX1 | 7 | - |
| exon-exon | ALB | 4 | + | HELB | 12 | - |
| exon-intron | ALB | 4 | + | MARK2P11 | 5 | - |
| exon-intron | ALB | 4 | + | USP4 | 3 | - |
| intron-exon | ALDH16A1 | 19 | - | PIH1D1 | 19 | - |
| exon-intron | ALDH18A1 | 10 | - | CYFIP1 | 15 | + |
| exon-exon | ALDH1A1 | 9 | + | ALDH1A1 | 9 | - |
| exon-exon | ALDH1A2 | 15 | - | AQP9 | 15 | - |
| exon-intron | ALDH1L1 | 3 | + | ALDH1L1-AS1 | 3 | + |
| exon-intron | ALDH1L1 | 3 | + | ALDH1L1-AS1 | 3 | + |
| intron-exon | ALDH1L1-AS1 | 3 | + | ALDH1L1 | 3 | + |
| intron-exon | ALDH1L1-AS2 | 3 | - | ALDH1L1 | 3 | - |
| intron-exon | ALDH1L1-AS2 | 3 | - | ALDH1L1 | 3 | - |
| intron-exon | ALDH1L2 | 12 | - | C12orf45 | 12 | - |
| exon-intron | ALDH3A1 | 17 | + | ASPH | 8 | - |
| exon-intron | ALDOA | 16 | + | CACNA1A | 19 | + |
| exon-intron | ALDOA | 16 | + | RBM34 | 1 | - |
| exon-exon | ALG11 | 13 | + | UTP14C | 13 | + |
| exon-intron | ALG11 | 13 | - | EHBP1 | 2 | - |
| intron-exon | ALG1L | 3 | + | ROPN1B | 3 | + |
| intron-exon | ALG1L | 3 | + | ROPN1B | 3 | + |
| intron-exon | ALG1L | 3 | + | ROPN1B | 3 | + |
| intron-exon | ALG1L | 3 | - | FAM86JP | 3 | - |
| exon-intron | ALG1L2 | 3 | + | LINC02021 | 3 | + |
| intron-exon | ALG3 | 3 | + | EEF1AKMT4-ECE2 | 3 | + |
| intron-exon | ALG3 | 3 | + | EEF1AKMT4-ECE2 | 3 | + |
| intron-exon | ALG3 | 3 | + | EEF1AKMT4-ECE2 | 3 | + |
| exon-intron | ALG9 | 11 | - | AP001781.1 | 11 | - |
| exon-intron | ALG9 | 11 | - | LOC105372242 | 19 | - |
| exon-intron | ALKAL2 | 2 | + | LOC101927262 | 2 | + |
| exon-intron | ALKBH2 | 12 | - | GOLM2 | 15 | - |
| intron-exon | ALKBH3-AS1 | 11 | - | ALKBH3 | 11 | - |
| intron-exon | ALKBH3-AS1 | 11 | - | ALKBH3 | 11 | - |
| intron-exon | ALKBH3-AS1 | 11 | - | ALKBH3 | 11 | - |
| intron-exon | ALKBH3-AS1 | 11 | - | ALKBH3 | 11 | - |
| intron-exon | ALKBH3-AS1 | 11 | - | ALKBH3 | 11 | - |
| intron-exon | ALKBH3-AS1 | 11 | - | ALKBH3 | 11 | - |
| intron-exon | ALKBH3-AS1 | 11 | - | ALKBH3 | 11 | - |
| intron-exon | ALKBH3-AS1 | 11 | - | ALKBH3 | 11 | - |
| intron-exon | ALKBH3-AS1 | 11 | - | ALKBH3 | 11 | - |
| intron-exon | ALKBH3-AS1 | 11 | - | ALKBH3 | 11 | - |
| intron-exon | ALKBH3-AS1 | 11 | - | ALKBH3 | 11 | - |
| intron-exon | ALKBH3-AS1 | 11 | - | ALKBH3 | 11 | - |
| intron-exon | ALKBH3-AS1 | 11 | - | ALKBH3 | 11 | - |
| intron-exon | ALKBH3-AS1 | 11 | - | ALKBH3 | 11 | - |
| intron-exon | ALKBH3-AS1 | 11 | - | ALKBH3 | 11 | - |
| intron-exon | ALKBH3-AS1 | 11 | - | ALKBH3 | 11 | - |
| intron-exon | ALKBH3-AS1 | 11 | - | ALKBH3 | 11 | - |
| exon-intron | ALOX12-AS1 | 17 | - | ALOX12P2 | 17 | - |
| exon-intron | ALOX12-AS1 | 17 | - | ALOX12P2 | 17 | - |
| exon-intron | ALOX12-AS1 | 17 | - | GLRA2 | X | + |
| exon-intron | ALOX12B | 17 | + | LOC107985075 | 17 | + |
| exon-intron | ALOX5AP | 13 | + | PDCD2L | 19 | - |
| exon-intron | ALYREF | 17 | - | STRN | 2 | - |
| exon-intron | AMBP | 9 | - | WDR7 | 18 | - |
| exon-intron | AMBP | 9 | - | DCC | 18 | + |
| exon-intron | AMFR | 16 | - | LOC283856 | 16 | - |
| exon-exon | AMFR | 16 | - | PRRC2A | 6 | - |
| exon-intron | AMH | 19 | - | LOC108783649 | 19 | - |
| exon-exon | AMPD2 | 1 | - | GNAT2 | 1 | - |
| exon-exon | AMT | 3 | + | SMTN | 22 | - |
| exon-exon | AMY1B | 1 | + | AMY2A | 1 | - |
| exon-exon | AMY2B | 1 | + | AMY1A | 1 | + |
| exon-exon | AMYP1 | 1 | - | AMY1A | 1 | - |
| exon-exon | ANAPC1 | 2 | - | ANAPC1P1 | 2 | + |
| exon-exon | ANAPC10 | 4 | + | ABCE1 | 4 | + |
| intron-exon | ANAPC11 | 17 | - | ALYREF | 17 | - |
| exon-intron | ANAPC16 | 10 | + | LOC105378519 | 10 | - |
| exon-intron | ANAPC16 | 10 | - | MEG3 | 14 | + |
| intron-exon | ANAPC1P1 | 2 | - | CD8B | 2 | - |
| exon-exon | ANAPC1P2 | 2 | + | ANAPC1P3 | 2 | + |
| intron-exon | ANAPC7 | 12 | + | UBE2D3 | 4 | - |
| intron-exon | ANGEL1 | 14 | - | VASH1 | 14 | - |
| exon-exon | ANGEL2 | 1 | - | VASH2 | 1 | - |
| exon-intron | ANGPT2 | 8 | - | MCPH1 | 8 | - |
| exon-intron | ANGPTL2 | 9 | - | RALGPS1 | 9 | - |
| intron-exon | ANK2 | 4 | + | NFIB | 9 | + |
| exon-exon | ANKAR | 2 | + | OSGEPL1-AS1 | 2 | + |
| intron-exon | ANKDD1A | 15 | + | BAZ1B | 7 | + |
| intron-exon | ANKDD1A | 15 | + | ILF3 | 19 | - |
| exon-intron | ANKFY1 | 17 | - | CYB5D2 | 17 | - |
| exon-intron | ANKFY1 | 17 | - | CYB5D2 | 17 | - |
| exon-exon | ANKHD1-EIF4EBP3 | 5 | + | ANKHD1-EIF4EBP3 | 5 | + |
| exon-exon | ANKHD1-EIF4EBP3 | 5 | + | ANKHD1-EIF4EBP3 | 5 | + |
| exon-exon | ANKHD1-EIF4EBP3 | 5 | + | ANKHD1-EIF4EBP3 | 5 | + |
| exon-exon | ANKHD1-EIF4EBP3 | 5 | + | ANKHD1-EIF4EBP3 | 5 | + |
| exon-exon | ANKHD1-EIF4EBP3 | 5 | + | ANKHD1-EIF4EBP3 | 5 | + |
| exon-exon | ANKHD1-EIF4EBP3 | 5 | + | ANKHD1-EIF4EBP3 | 5 | + |
| exon-exon | ANKHD1-EIF4EBP3 | 5 | + | ANKHD1-EIF4EBP3 | 5 | + |
| exon-exon | ANKHD1-EIF4EBP3 | 5 | + | ANKHD1-EIF4EBP3 | 5 | + |
| exon-exon | ANKHD1-EIF4EBP3 | 5 | + | ANKHD1-EIF4EBP3 | 5 | + |
| exon-exon | ANKHD1-EIF4EBP3 | 5 | - | ANKHD1-EIF4EBP3 | 5 | - |
| exon-exon | ANKIB1 | 7 | - | KRIT1 | 7 | - |
| exon-exon | ANKIB1 | 7 | - | KRIT1 | 7 | - |
| exon-intron | ANKMY2 | 7 | + | LOC105375169 | 7 | + |
| intron-exon | ANKRA2 | 5 | + | UTP15 | 5 | + |
| exon-exon | ANKRD10 | 13 | + | SINHCAF | 12 | - |
| exon-intron | ANKRD10 | 13 | - | TMEM168 | 7 | - |
| exon-exon | ANKRD10 | 13 | - | PKMYT1 | 16 | - |
| exon-exon | ANKRD13A | 12 | + | C12orf76 | 12 | + |
| intron-exon | ANKRD13B | 17 | - | GIT1 | 17 | - |
| exon-intron | ANKRD18B | 9 | + | SNX18P7 | 9 | + |
| exon-exon | ANKRD20A11P | 21 | - | LOC110091776 | 21 | - |
| exon-exon | ANKRD20A4-ANKRD20A20P | 9 | - | ANKRD20A4-ANKRD20A20P | 9 | - |
| exon-exon | ANKRD23 | 2 | + | ANKRD39 | 2 | + |
| exon-exon | ANKRD23 | 2 | - | CNNM3 | 2 | - |
| exon-exon | ANKRD30BP3 | 10 | - | EIF2AK1 | 7 | + |
| exon-exon | ANKRD36 | 2 | + | ANKRD36B | 2 | - |
| exon-exon | ANKRD36 | 2 | + | ANKRD36B | 2 | - |
| exon-intron | ANKRD36B | 2 | - | AC159540.2 | 2 | - |
| exon-intron | ANKRD36B | 2 | - | PTPRK | 6 | + |
| exon-exon | ANKRD39 | 2 | - | ANKRD23 | 2 | - |
| exon-exon | ANKRD52 | 12 | - | SST | 3 | - |
| exon-exon | ANKRD54 | 22 | + | EIF3L | 22 | + |
| intron-exon | ANKRD62P1 | 22 | + | VWFP1 | 22 | + |
| exon-exon | ANKRD62P1-PARP4P3 | 22 | - | ANKRD62P1-PARP4P3 | 22 | - |
| exon-exon | ANKRD7 | 7 | - | LSM8 | 7 | - |
| exon-exon | ANKS1B | 12 | - | APAF1 | 12 | - |
| intron-exon | ANKS1B | 12 | - | ASB3 | 2 | - |
| intron-exon | ANKS4B | 16 | + | CRYM | 16 | + |
| intron-exon | ANKS6 | 9 | - | AHCYL1 | 1 | + |
| intron-exon | ANKUB1 | 3 | - | WWTR1 | 3 | - |
| intron-exon | ANO10 | 3 | + | ABHD5 | 3 | + |
| intron-exon | ANO10 | 3 | - | SNRK | 3 | - |
| exon-intron | ANO6 | 12 | - | PLEKHA8P1 | 12 | - |
| exon-intron | ANO9 | 11 | - | PDZD8 | 10 | + |
| intron-exon | ANP32A | 15 | + | GSDMD | 8 | - |
| exon-exon | ANP32B | 9 | + | PTPN11 | 12 | + |
| intron-exon | ANTXR1 | 2 | + | GFPT1 | 2 | + |
| exon-exon | ANXA2 | 15 | + | ANXA2P2 | 9 | - |
| exon-exon | ANXA2 | 15 | + | ANXA2P2 | 9 | - |
| exon-exon | ANXA2 | 15 | + | ANXA2P2 | 9 | - |
| exon-exon | ANXA2 | 15 | + | ANXA2P2 | 9 | - |
| exon-exon | ANXA2 | 15 | + | ANXA2P2 | 9 | - |
| exon-exon | ANXA2 | 15 | + | ANXA2P2 | 9 | - |
| exon-exon | ANXA2 | 15 | + | ANXA2P2 | 9 | - |
| exon-exon | ANXA2 | 15 | + | ANXA2P2 | 9 | - |
| exon-exon | ANXA2 | 15 | + | ANXA2P2 | 9 | - |
| exon-exon | ANXA2 | 15 | + | ANXA2P2 | 9 | - |
| exon-exon | ANXA2 | 15 | + | ANXA2P2 | 9 | - |
| exon-exon | ANXA2 | 15 | + | ANXA2P2 | 9 | - |
| exon-exon | ANXA2 | 15 | + | ANXA2P2 | 9 | - |
| exon-exon | ANXA2 | 15 | + | ANXA2P2 | 9 | - |
| exon-exon | ANXA2 | 15 | + | ANXA2P2 | 9 | - |
| exon-exon | ANXA2 | 15 | + | ANXA2P2 | 9 | - |
| exon-exon | ANXA2 | 15 | + | ANXA2P2 | 9 | - |
| exon-exon | ANXA2 | 15 | + | ANXA2P2 | 9 | - |
| exon-exon | ANXA2 | 15 | + | ANXA2P2 | 9 | - |
| exon-exon | ANXA2 | 15 | + | ANXA2P2 | 9 | - |
| exon-exon | ANXA2 | 15 | + | ANXA2P2 | 9 | - |
| exon-exon | ANXA2 | 15 | + | ANXA2P2 | 9 | - |
| exon-exon | ANXA2 | 15 | + | ANXA2P2 | 9 | - |
| exon-exon | ANXA2 | 15 | + | ANXA2P2 | 9 | - |
| exon-exon | ANXA2 | 15 | + | ANXA2P2 | 9 | - |
| exon-exon | ANXA2 | 15 | + | ANXA2P2 | 9 | - |
| exon-exon | ANXA2 | 15 | + | ANXA2P2 | 9 | - |
| exon-exon | ANXA2 | 15 | + | ANXA2P2 | 9 | - |
| exon-exon | ANXA2 | 15 | + | ANXA2P2 | 9 | - |
| exon-exon | ANXA2 | 15 | + | ANXA2P2 | 9 | - |
| exon-exon | ANXA2 | 15 | + | ANXA2P2 | 9 | - |
| exon-exon | ANXA2 | 15 | + | ANXA2P2 | 9 | - |
| exon-exon | ANXA2 | 15 | + | ANXA2P2 | 9 | - |
| exon-exon | ANXA2 | 15 | + | ANXA2P2 | 9 | - |
| exon-exon | ANXA2 | 15 | + | ANXA2P2 | 9 | - |
| exon-exon | ANXA2 | 15 | + | ANXA2P2 | 9 | - |
| exon-exon | ANXA2 | 15 | + | ANXA2P2 | 9 | - |
| exon-exon | ANXA2 | 15 | + | ANXA2P2 | 9 | - |
| exon-exon | ANXA2 | 15 | + | ANXA2P2 | 9 | - |
| exon-exon | ANXA2P2 | 9 | + | XBP1 | 22 | - |
| exon-exon | ANXA2P2 | 9 | + | XBP1 | 22 | - |
| exon-exon | ANXA2P2 | 9 | + | ANXA2 | 15 | - |
| intron-exon | ANXA4 | 2 | - | NPIPB12 | 16 | - |
| intron-exon | ANXA8 | 10 | + | SHLD2P3 | 10 | + |
| intron-exon | ANXA8 | 10 | - | BMS1P2-AGAP9 | 10 | - |
| intron-exon | ANXA8 | 10 | - | BMS1P2-AGAP9 | 10 | - |
| intron-exon | AP000893.2 | 11 | - | PRCP | 11 | - |
| intron-exon | AP001767.3 | 11 | - | RAB30-DT | 11 | - |
| intron-exon | AP001970.1 | 11 | - | CLMP | 11 | - |
| intron-exon | AP002373.1 | 11 | - | RBM7 | 11 | - |
| intron-exon | AP002373.1 | 11 | - | RBM7 | 11 | - |
| intron-exon | AP002373.1 | 11 | - | RBM7 | 11 | - |
| intron-exon | AP002373.1 | 11 | - | RBM7 | 11 | - |
| intron-exon | AP002373.1 | 11 | - | RBM7 | 11 | - |
| intron-exon | AP002373.1 | 11 | - | RBM7 | 11 | - |
| intron-exon | AP003066.1 | 11 | + | TINAGL1 | 1 | - |
| intron-exon | AP003108.2 | 11 | + | PPP1R32 | 11 | + |
| intron-exon | AP003123.1 | 11 | - | POGLUT3 | 11 | - |
| exon-exon | AP1G2 | 14 | + | LOC102724814 | 14 | + |
| exon-exon | AP1G2 | 14 | + | LOC102724814 | 14 | + |
| exon-exon | AP1G2 | 14 | + | LOC102724814 | 14 | + |
| exon-exon | AP1G2 | 14 | + | LOC102724814 | 14 | + |
| exon-exon | AP1G2 | 14 | + | LOC102724814 | 14 | + |
| exon-exon | AP1G2 | 14 | + | LOC102724814 | 14 | + |
| exon-intron | AP1G2 | 14 | + | LOC102724814 | 14 | + |
| exon-exon | AP1M2 | 19 | + | RPL30 | 8 | + |
| exon-exon | AP1S2 | X | + | LPCAT1 | 5 | - |
| exon-exon | AP2M1 | 3 | + | AP2M1 | 3 | - |
| exon-intron | AP2M1 | 3 | + | GAS7 | 17 | + |
| exon-exon | AP3M1 | 10 | - | IFFO2 | 1 | - |
| exon-exon | AP3S1 | 5 | - | ATG12 | 5 | - |
| exon-exon | AP3S1 | 5 | - | ATG12 | 5 | - |
| exon-exon | AP3S1 | 5 | - | ATG12 | 5 | - |
| exon-exon | AP3S1 | 5 | - | ATG12 | 5 | - |
| exon-exon | AP3S1 | 5 | - | ATG12 | 5 | - |
| exon-exon | AP3S1 | 5 | - | ATG12 | 5 | - |
| exon-exon | AP3S2 | 15 | + | ARPIN | 15 | + |
| exon-exon | AP3S2 | 15 | + | ARPIN | 15 | + |
| exon-exon | AP4M1 | 7 | - | MCM7 | 7 | - |
| exon-exon | AP4M1 | 7 | - | MCM7 | 7 | - |
| exon-exon | AP4M1 | 7 | - | MCM7 | 7 | - |
| exon-exon | AP4M1 | 7 | - | MCM7 | 7 | - |
| exon-exon | AP4M1 | 7 | - | MCM7 | 7 | - |
| exon-intron | AP4M1 | 7 | - | MCM7 | 7 | - |
| exon-exon | AP4M1 | 7 | - | MCM7 | 7 | - |
| exon-exon | AP5M1 | 14 | - | AP5M1 | 14 | + |
| exon-exon | APBB3 | 5 | + | RASSF4 | 10 | - |
| exon-exon | APBB3 | 5 | + | RASSF4 | 10 | - |
| exon-exon | APC | 5 | - | RBMS1 | 2 | + |
| exon-intron | APCS | 1 | + | SHROOM3 | 4 | - |
| intron-exon | APH1A | 1 | + | C1orf54 | 1 | + |
| intron-exon | API5 | 11 | - | PLIN3 | 19 | + |
| intron-exon | API5 | 11 | - | PLIN3 | 19 | + |
| exon-exon | APLF | 2 | - | LOC100379290 | 2 | - |
| intron-exon | APLF | 2 | - | LOC100379290 | 2 | - |
| exon-exon | APLP2 | 11 | + | ST14 | 11 | + |
| exon-exon | APOA1 | 11 | + | APOA1-AS | 11 | + |
| exon-exon | APOA1 | 11 | + | APOA1-AS | 11 | + |
| exon-intron | APOA1 | 11 | + | APOA1-AS | 11 | + |
| exon-intron | APOA1 | 11 | + | APOA1-AS | 11 | + |
| exon-exon | APOA1 | 11 | + | APOA1-AS | 11 | + |
| exon-intron | APOA1 | 11 | - | LINC01933 | 5 | - |
| exon-exon | APOA2 | 1 | + | YOD1 | 1 | - |
| exon-intron | APOA2 | 1 | - | TPO | 2 | + |
| exon-intron | APOA2 | 1 | - | DYNC1I1 | 7 | - |
| exon-intron | APOA2 | 1 | - | ESRP1 | 8 | - |
| exon-intron | APOA2 | 1 | - | EXOC6 | 10 | - |
| exon-intron | APOA2 | 1 | - | FAM153A | 5 | + |
| exon-intron | APOA2 | 1 | - | GPR160 | 3 | + |
| exon-intron | APOA2 | 1 | - | KCNMB2 | 3 | - |
| exon-exon | APOBEC1 | 12 | + | MALAT1 | 11 | + |
| intron-exon | APOBEC2 | 6 | - | OARD1 | 6 | - |
| exon-exon | APOBEC3A | 22 | + | APOBEC3B | 22 | + |
| intron-exon | APOBEC3B-AS1 | 22 | - | APOBEC3B | 22 | - |
| intron-exon | APOBEC3B-AS1 | 22 | - | APOBEC3B | 22 | - |
| exon-exon | APOBEC3C | 22 | + | MGRN1 | 16 | - |
| exon-exon | APOBEC3F | 22 | - | APOBEC3C | 22 | - |
| exon-intron | APOBEC3F | 22 | - | PTRH2 | 17 | - |
| exon-intron | APOBEC3G | 22 | - | APOBEC3B | 22 | - |
| exon-exon | APOBR | 16 | - | CLN3 | 16 | - |
| exon-exon | APOBR | 16 | - | CLN3 | 16 | - |
| exon-exon | APOBR | 16 | - | CLN3 | 16 | - |
| exon-exon | APOBR | 16 | - | CLN3 | 16 | - |
| exon-exon | APOBR | 16 | - | CLN3 | 16 | - |
| exon-exon | APOBR | 16 | - | CLN3 | 16 | - |
| exon-exon | APOC2 | 19 | - | APOC4 | 19 | - |
| exon-exon | APOC4 | 19 | + | APOC2 | 19 | + |
| exon-intron | APOE | 19 | + | LOC102723370 | 11 | + |
| exon-intron | APOL1 | 22 | + | FOXRED2 | 22 | + |
| exon-intron | APOL3 | 22 | - | CLEC16A | 16 | - |
| intron-exon | APOM | 6 | + | BAG6 | 6 | + |
| exon-intron | APOM | 6 | + | NLRP2 | 19 | - |
| exon-intron | APP | 21 | + | APP | 21 | - |
| exon-intron | APPL2 | 12 | + | LOC105369953 | 12 | + |
| exon-exon | AQP7P3 | 9 | - | BMS1P13 | 9 | - |
| exon-exon | AQP9 | 15 | - | ALDH1A2 | 15 | - |
| intron-exon | AQP9 | 15 | - | ALDH1A2 | 15 | - |
| exon-exon | AR | X | + | MAB21L1 | 13 | - |
| intron-exon | AR | X | + | OPHN1 | X | + |
| exon-intron | ARAP1 | 11 | + | ARAP1-AS2 | 11 | + |
| intron-exon | ARAP1 | 11 | - | OPA3 | 19 | - |
| exon-exon | ARAP3 | 5 | - | BSDC1 | 1 | - |
| exon-exon | AREL1 | 14 | - | LOC105370567 | 14 | - |
| exon-intron | ARF1 | 1 | + | RYR1 | 19 | + |
| exon-exon | ARF1 | 1 | - | DCAF5 | 14 | + |
| exon-exon | ARF3 | 12 | - | NDUFA6 | 22 | - |
| exon-exon | ARF4 | 3 | - | TSSK6 | 19 | + |
| intron-exon | ARF5 | 7 | + | FSCN3 | 7 | + |
| intron-exon | ARF5 | 7 | - | GCC1 | 7 | - |
| exon-exon | ARFGAP2 | 11 | - | C11orf49 | 11 | - |
| intron-exon | ARFGEF1 | 8 | - | CSPP1 | 8 | - |
| exon-intron | ARGLU1 | 13 | - | IPCEF1 | 6 | - |
| exon-exon | ARHGAP11A | 15 | + | SCG5 | 15 | + |
| exon-exon | ARHGAP11B | 15 | + | LOC100288637 | 15 | + |
| exon-exon | ARHGAP11B | 15 | + | LOC100288637 | 15 | + |
| exon-intron | ARHGAP15 | 2 | - | ARHGAP15-AS1 | 2 | - |
| exon-exon | ARHGAP17 | 16 | + | NFIC | 19 | - |
| exon-exon | ARHGAP17 | 16 | - | CELF5 | 19 | - |
| intron-exon | ARHGAP22 | 10 | - | MAPK8 | 10 | - |
| intron-exon | ARHGAP22 | 10 | - | MAPK8 | 10 | - |
| intron-exon | ARHGAP22 | 10 | - | MAPK8 | 10 | - |
| intron-exon | ARHGAP22 | 10 | - | MAPK8 | 10 | - |
| exon-exon | ARHGAP27P1 | 17 | - | BPTFP1 | 17 | - |
| intron-exon | ARHGAP27P1 | 17 | - | BPTFP1 | 17 | - |
| intron-exon | ARHGAP27P1 | 17 | - | BPTFP1 | 17 | - |
| exon-exon | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | + | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | + |
| exon-exon | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | + | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | + |
| exon-exon | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - |
| exon-exon | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - |
| exon-exon | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - |
| exon-exon | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - |
| exon-exon | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - |
| exon-exon | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - |
| exon-exon | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - |
| exon-exon | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - |
| exon-exon | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - |
| exon-exon | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - |
| exon-exon | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - |
| exon-exon | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - |
| exon-exon | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - |
| exon-exon | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - |
| exon-exon | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - |
| exon-exon | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - |
| exon-exon | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - |
| exon-exon | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - |
| exon-exon | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - |
| exon-exon | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - |
| exon-exon | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - |
| exon-exon | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - |
| exon-exon | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - |
| exon-exon | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - |
| exon-exon | ARHGAP29 | 1 | - | LOC105378858 | 1 | - |
| exon-exon | ARHGAP4 | X | - | L1CAM | X | - |
| intron-exon | ARHGAP4 | X | - | L1CAM | X | - |
| intron-exon | ARHGAP9 | 12 | + | MARS1 | 12 | + |
| intron-exon | ARHGAP9 | 12 | + | MARS1 | 12 | + |
| intron-exon | ARHGAP9 | 12 | + | MARS1 | 12 | + |
| exon-exon | ARHGDIG | 16 | - | RGS11 | 16 | - |
| intron-exon | ARHGEF1 | 19 | - | BABAM1 | 19 | - |
| intron-exon | ARHGEF10L | 1 | + | LGALS4 | 19 | - |
| intron-exon | ARHGEF12 | 11 | + | UTP11 | 1 | + |
| intron-exon | ARHGEF12 | 11 | - | ND4 | MT | + |
| exon-intron | ARHGEF2 | 1 | + | ARHGEF2-AS1 | 1 | + |
| exon-exon | ARHGEF26 | 3 | - | ARHGEF26-AS1 | 3 | - |
| exon-exon | ARHGEF26 | 3 | - | ARHGEF26-AS1 | 3 | - |
| intron-exon | ARHGEF26 | 3 | - | ARHGEF26-AS1 | 3 | - |
| intron-exon | ARHGEF26 | 3 | - | ARHGEF26-AS1 | 3 | - |
| exon-exon | ARHGEF26 | 3 | - | ARHGEF26-AS1 | 3 | - |
| exon-exon | ARHGEF26 | 3 | - | ARHGEF26-AS1 | 3 | - |
| intron-exon | ARHGEF3 | 3 | + | SPATA12 | 3 | + |
| exon-exon | ARHGEF39 | 9 | - | CCDC107 | 9 | - |
| exon-exon | ARHGEF39 | 9 | - | CCDC107 | 9 | - |
| intron-exon | ARHGEF40 | 14 | - | NDRG2 | 14 | - |
| exon-intron | ARHGEF7 | 13 | - | NBPF8 | 1 | - |
| exon-intron | ARHGEF7 | 13 | - | NBPF15 | 1 | + |
| exon-intron | ARID1A | 1 | - | LOC105373786 | 2 | + |
| exon-intron | ARID3A | 19 | - | PCAT14 | 22 | - |
| intron-exon | ARID4B | 1 | + | GGPS1 | 1 | + |
| exon-exon | ARID4B | 1 | - | RBM34 | 1 | - |
| exon-exon | ARID4B | 1 | - | RBM34 | 1 | - |
| exon-exon | ARID4B | 1 | - | RBM34 | 1 | - |
| exon-exon | ARID4B | 1 | - | RBM34 | 1 | - |
| exon-exon | ARID4B | 1 | - | RBM34 | 1 | - |
| exon-intron | ARIH1 | 15 | + | LOC441259 | 7 | - |
| intron-exon | ARL10 | 5 | - | DPYSL5 | 2 | - |
| intron-exon | ARL15 | 5 | - | CTSE | 1 | + |
| exon-exon | ARL16 | 17 | + | HGS | 17 | + |
| exon-intron | ARL17A | 17 | + | LRRC37A2 | 17 | + |
| exon-intron | ARL2 | 11 | + | SNX15 | 11 | + |
| exon-exon | ARL2-SNX15 | 11 | + | ARL2-SNX15 | 11 | + |
| exon-exon | ARL2-SNX15 | 11 | + | ARL2-SNX15 | 11 | + |
| exon-exon | ARL2-SNX15 | 11 | + | ARL2-SNX15 | 11 | + |
| intron-exon | ARL2-SNX15 | 11 | - | IGF2BP1 | 17 | - |
| exon-exon | ARL4C | 2 | - | COL10A1 | 6 | - |
| exon-exon | ARL4D | 17 | - | ARL4D | 17 | + |
| exon-intron | ARL6IP1 | 16 | - | RPS15A | 16 | - |
| intron-exon | ARMC4P1 | 10 | - | LRRC37A6P | 10 | - |
| intron-exon | ARMC6 | 19 | - | SUGP2 | 19 | - |
| intron-exon | ARMC6 | 19 | - | SUGP2 | 19 | - |
| exon-exon | ARMC6 | 19 | - | SUGP2 | 19 | - |
| intron-exon | ARMC6 | 19 | - | SUGP2 | 19 | - |
| exon-exon | ARMC6 | 19 | - | ARMC6 | 19 | + |
| exon-intron | ARMC7 | 17 | + | NT5C | 17 | + |
| intron-exon | ARMC8 | 3 | + | USP40 | 2 | - |
| intron-exon | ARMC9 | 2 | - | LOC112268432 | 2 | - |
| exon-exon | ARMCX4 | X | + | ARMCX1 | X | + |
| exon-exon | ARMCX5-GPRASP2 | X | + | ARMCX5-GPRASP2 | X | + |
| exon-exon | ARMCX5-GPRASP2 | X | + | ARMCX5-GPRASP2 | X | + |
| exon-exon | ARMCX5-GPRASP2 | X | + | ARMCX5-GPRASP2 | X | + |
| exon-exon | ARMCX5-GPRASP2 | X | + | ARMCX5-GPRASP2 | X | + |
| exon-exon | ARMCX5-GPRASP2 | X | + | ARMCX5-GPRASP2 | X | + |
| exon-exon | ARMCX5-GPRASP2 | X | + | ARMCX5-GPRASP2 | X | + |
| exon-exon | ARMCX5-GPRASP2 | X | + | ARMCX5-GPRASP2 | X | + |
| exon-exon | ARMCX5-GPRASP2 | X | + | ARMCX5-GPRASP2 | X | + |
| exon-exon | ARMCX5-GPRASP2 | X | + | ARMCX5-GPRASP2 | X | + |
| exon-exon | ARMCX5-GPRASP2 | X | + | ARMCX5-GPRASP2 | X | + |
| exon-exon | ARMCX5-GPRASP2 | X | + | ARMCX5-GPRASP2 | X | + |
| exon-exon | ARMCX5-GPRASP2 | X | + | ARMCX5-GPRASP2 | X | + |
| exon-exon | ARMCX5-GPRASP2 | X | + | ARMCX5-GPRASP2 | X | + |
| exon-exon | ARMCX5-GPRASP2 | X | + | ARMCX5-GPRASP2 | X | + |
| exon-exon | ARMCX5-GPRASP2 | X | + | ARMCX5-GPRASP2 | X | + |
| exon-exon | ARMCX5-GPRASP2 | X | + | ARMCX5-GPRASP2 | X | + |
| exon-exon | ARMCX5-GPRASP2 | X | + | ARMCX5-GPRASP2 | X | + |
| exon-exon | ARMCX5-GPRASP2 | X | + | ARMCX5-GPRASP2 | X | + |
| exon-exon | ARMCX5-GPRASP2 | X | + | ARMCX5-GPRASP2 | X | + |
| exon-exon | ARMCX5-GPRASP2 | X | + | ARMCX5-GPRASP2 | X | + |
| exon-exon | ARMCX5-GPRASP2 | X | + | ARMCX5-GPRASP2 | X | + |
| exon-exon | ARMCX5-GPRASP2 | X | + | ARMCX5-GPRASP2 | X | + |
| exon-exon | ARMCX5-GPRASP2 | X | + | ARMCX5-GPRASP2 | X | + |
| exon-exon | ARMCX5-GPRASP2 | X | + | ARMCX5-GPRASP2 | X | + |
| exon-exon | ARMCX5-GPRASP2 | X | + | ARMCX5-GPRASP2 | X | + |
| exon-exon | ARMCX5-GPRASP2 | X | + | ARMCX5-GPRASP2 | X | + |
| exon-exon | ARMCX5-GPRASP2 | X | + | ARMCX5-GPRASP2 | X | + |
| exon-exon | ARMCX5-GPRASP2 | X | + | ARMCX5-GPRASP2 | X | + |
| exon-exon | ARMCX5-GPRASP2 | X | + | ARMCX5-GPRASP2 | X | + |
| exon-exon | ARMCX5-GPRASP2 | X | + | ARMCX5-GPRASP2 | X | + |
| exon-exon | ARMCX5-GPRASP2 | X | + | ARMCX5-GPRASP2 | X | + |
| exon-exon | ARMCX5-GPRASP2 | X | + | ARMCX5-GPRASP2 | X | + |
| exon-exon | ARMCX5-GPRASP2 | X | + | ARMCX5-GPRASP2 | X | + |
| exon-exon | ARMCX5-GPRASP2 | X | - | ARMCX5-GPRASP2 | X | - |
| exon-exon | ARMCX5-GPRASP2 | X | - | ARMCX5-GPRASP2 | X | - |
| exon-exon | ARMCX5-GPRASP2 | X | - | ARMCX5-GPRASP2 | X | - |
| exon-exon | ARMCX6 | X | - | ARMCX7P | X | + |
| exon-exon | ARNT | 1 | + | CBX6 | 22 | + |
| exon-exon | ARPC1B | 7 | + | PDAP1 | 7 | + |
| exon-intron | ARPC1B | 7 | + | PCDH15 | 10 | - |
| exon-intron | ARPC2 | 2 | + | GNG7 | 19 | + |
| exon-intron | ARPC2 | 2 | + | EEF1G | 11 | + |
| exon-exon | ARPC4 | 3 | + | TTLL3 | 3 | + |
| exon-exon | ARPC4 | 3 | + | TTLL3 | 3 | + |
| exon-exon | ARPC4 | 3 | + | TTLL3 | 3 | + |
| exon-intron | ARPIN | 15 | - | AP3S2 | 15 | - |
| exon-intron | ARPIN | 15 | - | AP3S2 | 15 | - |
| exon-exon | ARPIN | 15 | - | AP3S2 | 15 | - |
| exon-exon | ARPIN | 15 | - | AP3S2 | 15 | - |
| intron-exon | ARPIN | 15 | - | AP3S2 | 15 | - |
| exon-exon | ARPIN-AP3S2 | 15 | - | ARPIN-AP3S2 | 15 | - |
| exon-intron | ARRDC1-AS1 | 9 | - | CTNNA1 | 5 | + |
| exon-exon | ARRDC5 | 19 | - | PLIN3 | 19 | - |
| exon-exon | ARRDC5 | 19 | - | PLIN3 | 19 | - |
| exon-exon | ARRDC5 | 19 | - | PLIN3 | 19 | - |
| intron-exon | ARSDP1 | Y | + | GYG2P1 | Y | + |
| intron-exon | ARSG | 17 | + | PRKAR1A | 17 | + |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ARVCF | 22 | - | COMT | 22 | - |
| intron-exon | ASAH2 | 10 | - | DYNC1I2P1 | 10 | - |
| exon-exon | ASB14 | 3 | - | APPL1 | 3 | - |
| intron-exon | ASB14 | 3 | - | APPL1 | 3 | - |
| intron-exon | ASB14 | 3 | - | APPL1 | 3 | - |
| intron-exon | ASB14 | 3 | - | APPL1 | 3 | - |
| intron-exon | ASB3 | 2 | + | CHAC2 | 2 | + |
| exon-exon | ASB6 | 9 | - | NTMT1 | 9 | - |
| exon-exon | ASB6 | 9 | - | NTMT1 | 9 | - |
| exon-exon | ASB6 | 9 | - | NTMT1 | 9 | - |
| exon-exon | ASB6 | 9 | - | NTMT1 | 9 | - |
| exon-exon | ASB6 | 9 | - | NTMT1 | 9 | - |
| exon-exon | ASCC1 | 10 | + | ANAPC16 | 10 | + |
| intron-exon | ASCC2 | 22 | - | FOXP4 | 6 | + |
| exon-intron | ASGR1 | 17 | - | HSPG2 | 1 | - |
| exon-exon | ASIC2 | 17 | + | LINC01989 | 17 | + |
| intron-exon | ASIC4-AS1 | 2 | + | GMPPA | 2 | + |
| exon-intron | ASL | 7 | + | CRCP | 7 | + |
| exon-exon | ASL | 7 | + | CRCP | 7 | + |
| intron-exon | ASMT | Y | - | AKAP17A | Y | - |
| intron-exon | ASMT | Y | - | AKAP17A | Y | - |
| exon-exon | ASMTL | Y | - | ASMTL-AS1 | Y | - |
| exon-exon | ASMTL | Y | - | ASMTL-AS1 | Y | - |
| exon-intron | ASMTL-AS1 | Y | + | P2RY8 | Y | + |
| intron-exon | ASRGL1 | 11 | - | MYBL2 | 20 | - |
| exon-intron | ASS1 | 9 | + | CSMD1 | 8 | - |
| exon-intron | ASS1 | 9 | + | CSMD1 | 8 | - |
| exon-intron | ASS1 | 9 | + | KLF8 | X | - |
| intron-exon | ASTE1 | 3 | - | ATP2C1 | 3 | - |
| intron-exon | ASTN2 | 9 | + | ASTN2-AS1 | 9 | + |
| intron-exon | ASTN2 | 9 | + | RPL10 | X | - |
| intron-exon | ATAD1 | 10 | + | CFL1P1 | 10 | + |
| exon-exon | ATAD3B | 1 | + | ATAD3A | 1 | + |
| exon-intron | ATAD5 | 17 | - | CRLF3 | 17 | - |
| exon-exon | ATF2 | 2 | - | CHN1 | 2 | - |
| exon-exon | ATF2 | 2 | - | CHN1 | 2 | - |
| exon-exon | ATF2 | 2 | - | CHN1 | 2 | - |
| exon-exon | ATF3 | 1 | - | LOC102724687 | 8 | - |
| exon-intron | ATF4P4 | 11 | + | LRRC37A13P | 11 | + |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-exon | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-exon | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-exon | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF5 | 19 | - | IL4I1 | 19 | - |
| exon-intron | ATF6 | 1 | + | NOS1AP | 1 | + |
| exon-intron | ATF6 | 1 | - | ZXDC | 3 | + |
| exon-exon | ATF7 | 12 | - | NPFF | 12 | - |
| exon-exon | ATF7 | 12 | - | ATF7-NPFF | 12 | - |
| exon-intron | ATF7 | 12 | - | ATF7-NPFF | 12 | - |
| exon-exon | ATF7 | 12 | - | ATF7-NPFF | 12 | - |
| exon-intron | ATF7 | 12 | - | ATF7-NPFF | 12 | - |
| intron-exon | ATF7-NPFF | 12 | + | LOC100652999 | 12 | + |
| intron-exon | ATG10 | 5 | - | CARD6 | 5 | - |
| exon-intron | ATG13 | 11 | - | FTL | 19 | + |
| exon-intron | ATG3 | 3 | + | ERC2 | 3 | - |
| exon-intron | ATG3 | 3 | + | POTEE | 2 | - |
| exon-exon | ATG9A | 2 | - | ABCB6 | 2 | - |
| exon-exon | ATG9A | 2 | - | ABCB6 | 2 | - |
| exon-intron | ATG9A | 2 | - | BTAF1 | 10 | - |
| exon-exon | ATG9B | 7 | - | NOS3 | 7 | - |
| exon-exon | ATM | 11 | - | NPAT | 11 | - |
| exon-exon | ATN1 | 12 | + | MTCH1 | 6 | - |
| exon-intron | ATN1 | 12 | + | TMEM266 | 15 | + |
| exon-exon | ATOX1 | 5 | + | MAP7D3 | X | - |
| exon-intron | ATP1A1 | 1 | + | SRGAP2 | 1 | + |
| exon-intron | ATP1A1 | 1 | + | LOC112577481 | 1 | + |
| exon-exon | ATP1A1 | 1 | - | ATP1A1 | 1 | + |
| intron-exon | ATP1A1-AS1 | 1 | - | ATP1A1 | 1 | - |
| intron-exon | ATP1A1-AS1 | 1 | - | ATP1A1 | 1 | - |
| intron-exon | ATP1A1-AS1 | 1 | - | ATP1A1 | 1 | - |
| intron-exon | ATP1A1-AS1 | 1 | - | ATP1A1 | 1 | - |
| intron-exon | ATP1A1-AS1 | 1 | - | ATP1A1 | 1 | - |
| intron-exon | ATP1A1-AS1 | 1 | - | ATP1A1 | 1 | - |
| intron-exon | ATP1A1-AS1 | 1 | - | ATP1A1 | 1 | - |
| exon-exon | ATP1A1-AS1 | 1 | - | ATP1A1 | 1 | - |
| exon-exon | ATP1A2 | 1 | - | ATP1A2 | 1 | + |
| exon-intron | ATP1B1 | 1 | + | NME7 | 1 | + |
| exon-intron | ATP1B3 | 3 | - | CIITA | 16 | - |
| exon-exon | ATP2B1 | 12 | + | ATP2B1 | 12 | - |
| exon-intron | ATP2C2-AS1 | 16 | - | ATP2C2 | 16 | - |
| exon-intron | ATP5F1B | 12 | - | UBE2K | 4 | - |
| exon-intron | ATP5F1C | 10 | + | LOC105376392 | 10 | + |
| exon-intron | ATP5F1C | 10 | + | LOC105376392 | 10 | + |
| exon-exon | ATP5F1E | 20 | + | PRELID3B | 20 | + |
| exon-exon | ATP5IF1 | 1 | - | DNAJC8 | 1 | - |
| exon-exon | ATP5IF1 | 1 | - | DNAJC8 | 1 | - |
| exon-intron | ATP5MC1 | 17 | + | LOC105371814 | 17 | + |
| exon-exon | ATP5MC3 | 2 | + | RPS8 | 1 | - |
| exon-intron | ATP5MC3 | 2 | + | RPS8P1 | 14 | + |
| exon-exon | ATP5MDP1 | X | + | IFIT2 | 10 | - |
| exon-exon | ATP5MF | 7 | - | PTCD1 | 7 | - |
| exon-exon | ATP5MF | 7 | - | PTCD1 | 7 | - |
| exon-exon | ATP5MF | 7 | - | PTCD1 | 7 | - |
| exon-exon | ATP5MF | 7 | - | PTCD1 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-intron | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-intron | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | BUD31 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | ATP5MF-PTCD1 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | ATP5MF-PTCD1 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | ATP5MF-PTCD1 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | ATP5MF-PTCD1 | 7 | - |
| exon-exon | ATP5MF-PTCD1 | 7 | - | ATP5MF-PTCD1 | 7 | - |
| exon-intron | ATP5MG | 11 | + | BRCA2 | 13 | - |
| exon-intron | ATP5MG | 11 | + | LOC100506403 | 21 | - |
| exon-intron | ATP5MG | 11 | + | HDGFL3 | 15 | - |
| exon-intron | ATP5PD | 17 | - | KCTD2 | 17 | - |
| exon-exon | ATP5PO | 21 | - | DONSON | 21 | - |
| exon-exon | ATP5PO | 21 | - | DONSON | 21 | - |
| exon-exon | ATP6 | MT | + | CYTB | MT | + |
| exon-intron | ATP6 | MT | + | MTCO3P12 | 1 | + |
| exon-intron | ATP6 | MT | + | MTCO3P12 | 1 | + |
| exon-intron | ATP6 | MT | + | COX3 | MT | + |
| exon-intron | ATP6 | MT | + | COX3 | MT | + |
| exon-exon | ATP6 | MT | + | ND5 | MT | + |
| exon-intron | ATP6 | MT | + | COX3 | MT | + |
| exon-exon | ATP6 | MT | + | ATP6 | MT | - |
| exon-intron | ATP6 | MT | + | COX3 | MT | + |
| exon-intron | ATP6 | MT | + | MTCO3P12 | 1 | + |
| exon-exon | ATP6 | MT | + | ND5 | MT | + |
| exon-intron | ATP6 | MT | + | COX3 | MT | + |
| exon-exon | ATP6 | MT | + | ATP6 | MT | - |
| exon-exon | ATP6 | MT | + | ATP6 | MT | - |
| exon-exon | ATP6 | MT | + | ATP6 | MT | - |
| exon-exon | ATP6 | MT | + | ATP6 | MT | - |
| exon-exon | ATP6 | MT | + | ATP6 | MT | - |
| exon-exon | ATP6 | MT | + | COX3 | MT | + |
| exon-exon | ATP6 | MT | - | ATP8 | MT | - |
| exon-exon | ATP6 | MT | - | ATP8 | MT | - |
| exon-exon | ATP6 | MT | - | ARFGAP3 | 22 | + |
| exon-exon | ATP6 | MT | - | ATP8 | MT | - |
| exon-exon | ATP6 | MT | - | ATP8 | MT | - |
| exon-intron | ATP6 | MT | - | MTATP8P1 | 1 | - |
| exon-exon | ATP6 | MT | - | NEAT1 | 11 | + |
| exon-intron | ATP6 | MT | - | KRT23 | 17 | - |
| exon-exon | ATP6 | MT | - | FRMD4A | 10 | - |
| exon-intron | ATP6 | MT | - | HACD3 | 15 | - |
| exon-intron | ATP6AP1 | X | + | NELL1 | 11 | - |
| exon-exon | ATP6AP1L | 5 | - | RPS23 | 5 | - |
| exon-exon | ATP6AP1L | 5 | - | RPS23 | 5 | - |
| exon-exon | ATP6AP2 | X | + | GAGE12B | X | + |
| exon-exon | ATP6AP2 | X | + | GAGE12G | X | + |
| exon-intron | ATP6AP2 | X | + | POM121C | 7 | + |
| exon-exon | ATP6V0E2-AS1 | 7 | + | ATP6V0E2 | 7 | + |
| exon-intron | ATP6V1A | 3 | - | EFCAB3 | 17 | - |
| exon-intron | ATP6V1D | 14 | - | GPHN | 14 | - |
| exon-intron | ATP6V1D | 14 | - | GPHN | 14 | - |
| exon-exon | ATP6V1E1 | 22 | - | IL1RN | 2 | - |
| exon-exon | ATP6V1FNB | 7 | + | KCP | 7 | + |
| exon-intron | ATP6V1G2 | 6 | - | DDX39B | 6 | - |
| exon-exon | ATP6V1G2 | 6 | - | DDX39B | 6 | - |
| exon-exon | ATP6V1G2-DDX39B | 6 | - | ATP6V1G2-DDX39B | 6 | - |
| exon-exon | ATP6V1G2-DDX39B | 6 | - | ATP6V1G2-DDX39B | 6 | - |
| exon-exon | ATP8 | MT | + | ND5 | MT | + |
| exon-intron | ATP8 | MT | + | ATP6 | MT | + |
| exon-exon | ATP8 | MT | + | ATP6 | MT | + |
| exon-exon | ATP8 | MT | + | ATP6 | MT | + |
| exon-exon | ATP8 | MT | + | ATP6 | MT | + |
| exon-exon | ATP8 | MT | - | ND4L | MT | - |
| intron-exon | ATP8A2P3 | 13 | + | RNF6 | 13 | + |
| intron-exon | ATPAF2 | 17 | - | DRC3 | 17 | - |
| intron-exon | ATPAF2 | 17 | - | DRC3 | 17 | - |
| intron-exon | ATPAF2 | 17 | - | DRC3 | 17 | - |
| exon-intron | ATPAF2 | 17 | - | LOC107984989 | 17 | - |
| exon-exon | ATRAID | 2 | - | SLC5A6 | 2 | - |
| intron-exon | ATRAID | 2 | - | SLC5A6 | 2 | - |
| intron-exon | ATRAID | 2 | - | SLC5A6 | 2 | - |
| intron-exon | ATRAID | 2 | - | SLC5A6 | 2 | - |
| intron-exon | ATRAID | 2 | - | SLC5A6 | 2 | - |
| intron-exon | ATXN1-AS1 | 6 | - | ATXN1 | 6 | - |
| exon-exon | ATXN1L | 16 | + | IST1 | 16 | + |
| exon-intron | ATXN1L | 16 | + | ZNF821 | 16 | + |
| intron-exon | ATXN2 | 12 | - | ZFP36L2 | 2 | - |
| exon-exon | AUNIP | 1 | - | MTFR1L | 1 | - |
| intron-exon | AUNIP | 1 | - | MTFR1L | 1 | - |
| exon-exon | AVIL | 12 | - | TSFM | 12 | - |
| exon-intron | AXIN2 | 17 | + | LOC101927066 | 8 | + |
| exon-intron | AXL | 19 | + | ST3GAL3 | 1 | + |
| intron-exon | AZIN1-AS1 | 8 | - | AZIN1 | 8 | - |
| intron-exon | AZIN1-AS1 | 8 | - | AZIN1 | 8 | - |
| exon-intron | B2M | 15 | + | BPIFC | 22 | - |
| exon-exon | B2M | 15 | - | PCBP1 | 2 | + |
| exon-exon | B3GALNT1 | 3 | + | NMD3 | 3 | + |
| exon-intron | B3GALNT1 | 3 | + | NMD3 | 3 | + |
| exon-exon | B3GALNT2 | 1 | - | TBCE | 1 | - |
| exon-exon | B3GALNT2 | 1 | - | TBCE | 1 | - |
| exon-exon | B3GALNT2 | 1 | - | TBCE | 1 | - |
| exon-exon | B3GALNT2 | 1 | - | TBCE | 1 | - |
| exon-exon | B3GALNT2 | 1 | - | TBCE | 1 | - |
| exon-exon | B3GALNT2 | 1 | - | TBCE | 1 | - |
| exon-exon | B3GALNT2 | 1 | - | TBCE | 1 | - |
| exon-exon | B3GALNT2 | 1 | - | TBCE | 1 | - |
| exon-exon | B3GALNT2 | 1 | - | TBCE | 1 | - |
| exon-exon | B3GALNT2 | 1 | - | TBCE | 1 | - |
| exon-exon | B3GALNT2 | 1 | - | TBCE | 1 | - |
| exon-exon | B3GALNT2 | 1 | - | TBCE | 1 | - |
| exon-exon | B3GALNT2 | 1 | - | TBCE | 1 | - |
| exon-exon | B3GALNT2 | 1 | - | TBCE | 1 | - |
| exon-exon | B3GALNT2 | 1 | - | TBCE | 1 | - |
| exon-exon | B3GALNT2 | 1 | - | TBCE | 1 | - |
| exon-exon | B3GALNT2 | 1 | - | TBCE | 1 | - |
| exon-intron | B3GALT1 | 2 | + | B3GALT1-AS1 | 2 | + |
| exon-intron | B3GALT5 | 21 | + | IGSF5 | 21 | + |
| exon-exon | B3GAT2 | 6 | - | SMAP1 | 6 | - |
| exon-exon | B3GAT3 | 11 | - | GANAB | 11 | - |
| intron-exon | B3GNT2 | 2 | - | COX2 | MT | + |
| exon-exon | B3GNT5 | 3 | + | LOC107986160 | 3 | + |
| exon-exon | B3GNT9 | 16 | - | C16orf70 | 16 | - |
| exon-exon | B3GNT9 | 16 | - | C16orf70 | 16 | - |
| exon-exon | B3GNTL1 | 17 | - | TBCD | 17 | - |
| exon-exon | B3GNTL1 | 17 | - | TBCD | 17 | - |
| exon-exon | B4GALNT3 | 12 | - | CCDC77 | 12 | - |
| exon-intron | B4GALT1 | 9 | + | B4GALT1-AS1 | 9 | + |
| exon-intron | B4GALT4 | 3 | + | B4GALT4-AS1 | 3 | + |
| exon-intron | B4GALT4 | 3 | + | B4GALT4-AS1 | 3 | + |
| exon-exon | B4GALT4 | 3 | + | B4GALT4-AS1 | 3 | + |
| exon-intron | BACE2 | 21 | - | DNAJB6 | 7 | - |
| exon-intron | BACE2 | 21 | - | DNAJB6 | 7 | - |
| exon-intron | BACH2 | 6 | + | C9orf92 | 9 | - |
| exon-intron | BAD | 11 | + | GPR137 | 11 | + |
| exon-intron | BAD | 11 | + | GPR137 | 11 | + |
| exon-intron | BAD | 11 | + | GPR137 | 11 | + |
| exon-intron | BAD | 11 | + | GPR137 | 11 | + |
| exon-intron | BAD | 11 | + | GPR137 | 11 | + |
| exon-intron | BAD | 11 | + | GPR137 | 11 | + |
| exon-intron | BAD | 11 | + | GPR137 | 11 | + |
| exon-intron | BAG2 | 6 | + | RAB23 | 6 | + |
| exon-exon | BAG5 | 14 | + | KLC1 | 14 | + |
| exon-intron | BAHCC1 | 17 | + | SFTA3 | 14 | + |
| exon-intron | BAIAP2-DT | 17 | + | LOC101927124 | 14 | - |
| exon-exon | BANK1 | 4 | + | LOC107986297 | 4 | + |
| intron-exon | BASP1-AS1 | 5 | - | BASP1 | 5 | - |
| exon-exon | BAZ2A | 12 | - | RBMS2 | 12 | - |
| exon-exon | BAZ2A | 12 | - | RBMS2 | 12 | - |
| exon-exon | BAZ2A | 12 | - | RBMS2 | 12 | - |
| exon-exon | BAZ2A | 12 | - | RBMS2 | 12 | - |
| exon-exon | BAZ2A | 12 | - | RBMS2 | 12 | - |
| exon-exon | BAZ2B | 2 | + | LOC643072 | 2 | + |
| exon-exon | BBIP1 | 10 | - | PDCD4 | 10 | - |
| intron-exon | BBOF1 | 14 | + | LIN52 | 14 | + |
| exon-intron | BBOF1 | 14 | + | VRTN | 14 | + |
| exon-exon | BBOX1-AS1 | 11 | - | IFIT2 | 10 | + |
| exon-exon | BBS1 | 11 | + | ZDHHC24 | 11 | + |
| exon-exon | BBS1 | 11 | + | ZDHHC24 | 11 | + |
| exon-exon | BBS1 | 11 | + | ZDHHC24 | 11 | + |
| intron-exon | BBS2 | 16 | - | OGFOD1 | 16 | - |
| intron-exon | BBS2 | 16 | - | OGFOD1 | 16 | - |
| exon-exon | BBS7 | 4 | - | CCNA2 | 4 | - |
| exon-exon | BBX | 3 | + | BBX | 3 | - |
| exon-exon | BCAP31 | X | + | BCAP31 | X | - |
| exon-exon | BCAS3 | 17 | + | ADAM10 | 15 | - |
| exon-intron | BCAT1 | 12 | + | LOC105369699 | 12 | + |
| intron-exon | BCDIN3D | 12 | - | BCDIN3D-AS1 | 12 | - |
| intron-exon | BCDIN3D | 12 | - | BCDIN3D-AS1 | 12 | - |
| intron-exon | BCDIN3D | 12 | - | BCDIN3D-AS1 | 12 | - |
| intron-exon | BCL11B | 14 | + | AMY1B | 1 | - |
| intron-exon | BCL11B | 14 | + | AMY2B | 1 | + |
| exon-intron | BCL2 | 18 | - | IGH | 14 | - |
| intron-exon | BCL2L1 | 20 | + | BCL2L1-AS1 | 20 | + |
| exon-exon | BCL2L1 | 20 | + | ABALON | 20 | + |
| exon-exon | BCL2L12 | 19 | - | LENG8 | 19 | - |
| exon-exon | BCL2L13 | 22 | - | BCL2L13 | 22 | + |
| exon-intron | BCL2L14 | 12 | + | LRP6 | 12 | + |
| exon-exon | BCL2L2 | 14 | + | PABPN1 | 14 | + |
| exon-intron | BCL2L2-PABPN1 | 14 | - | RELCH | 18 | + |
| exon-exon | BCL2L2-PABPN1 | 14 | - | CYP4F8 | 19 | - |
| intron-exon | BCL6 | 3 | - | LOC100131635 | 3 | - |
| intron-exon | BCL7C | 16 | + | CTF1 | 16 | + |
| exon-intron | BCLAF1 | 6 | - | CSDC2 | 22 | + |
| exon-intron | BCLAF1 | 6 | - | MYO1E | 15 | - |
| exon-intron | BCO2 | 11 | - | TEX12 | 11 | - |
| exon-exon | BCO2 | 11 | - | TEX12 | 11 | - |
| exon-exon | BCR | 22 | + | ABL1 | 9 | + |
| exon-exon | BCR | 22 | + | FGFR1 | 8 | - |
| exon-exon | BCR | 22 | + | ABL1 | 9 | + |
| exon-exon | BDKRB2 | 14 | + | BDKRB1 | 14 | + |
| exon-exon | BDP1 | 5 | + | KDM5A | 12 | - |
| exon-exon | BEAN1 | 16 | - | SAP30BP | 17 | + |
| exon-intron | BECN1 | 17 | - | LOC107985007 | 17 | - |
| exon-intron | BECN1 | 17 | - | LOC107985007 | 17 | - |
| intron-exon | BEST1 | 11 | + | FTH1 | 11 | + |
| exon-intron | BEST3 | 12 | - | LOC105369823 | 12 | - |
| exon-exon | BET1L | 11 | - | LOC388572 | 11 | - |
| exon-exon | BFAR | 16 | - | BFAR | 16 | + |
| intron-exon | BGN | X | - | HAUS7 | X | - |
| intron-exon | BGN | X | - | HAUS7 | X | - |
| intron-exon | BGN | X | - | HAUS7 | X | - |
| intron-exon | BGN | X | - | HAUS7 | X | - |
| intron-exon | BGN | X | - | HAUS7 | X | - |
| intron-exon | BGN | X | - | HAUS7 | X | - |
| intron-exon | BGN | X | - | HAUS7 | X | - |
| intron-exon | BGN | X | - | HAUS7 | X | - |
| intron-exon | BGN | X | - | HAUS7 | X | - |
| intron-exon | BGN | X | - | HAUS7 | X | - |
| intron-exon | BGN | X | - | HAUS7 | X | - |
| intron-exon | BGN | X | - | HAUS7 | X | - |
| intron-exon | BGN | X | - | HAUS7 | X | - |
| intron-exon | BGN | X | - | HAUS7 | X | - |
| intron-exon | BGN | X | - | HAUS7 | X | - |
| intron-exon | BGN | X | - | HAUS7 | X | - |
| intron-exon | BGN | X | - | HAUS7 | X | - |
| intron-exon | BGN | X | - | HAUS7 | X | - |
| intron-exon | BGN | X | - | HAUS7 | X | - |
| intron-exon | BGN | X | - | HAUS7 | X | - |
| intron-exon | BGN | X | - | HAUS7 | X | - |
| intron-exon | BGN | X | - | HAUS7 | X | - |
| exon-intron | BGN | X | - | LOC105371114 | 16 | - |
| exon-exon | BGN | X | - | TSHZ1 | 18 | - |
| exon-intron | BHLHA15 | 7 | + | TECPR1 | 7 | + |
| exon-exon | BHLHE40 | 3 | - | BHLHE40-AS1 | 3 | - |
| exon-exon | BHMT | 5 | + | DMGDH | 5 | + |
| intron-exon | BICC1 | 10 | + | ADIPOR1 | 1 | + |
| intron-exon | BICRAL | 6 | + | RPL7L1 | 6 | + |
| exon-intron | BIRC5 | 17 | + | NPIPB1P | 18 | - |
| exon-intron | BIRC5 | 17 | + | USPL1 | 13 | + |
| exon-intron | BIRC5 | 17 | + | FAM155B | X | + |
| exon-intron | BIVM | 13 | + | ERCC5 | 13 | + |
| exon-exon | BIVM | 13 | + | ERCC5 | 13 | + |
| exon-exon | BIVM | 13 | + | ERCC5 | 13 | + |
| exon-exon | BLACAT1 | 1 | + | LEMD1-DT | 1 | + |
| exon-intron | BLACAT1 | 1 | - | LEMD1 | 1 | - |
| exon-intron | BLACAT1 | 1 | - | LEMD1 | 1 | - |
| exon-intron | BLACAT1 | 1 | - | LEMD1 | 1 | - |
| exon-exon | BLCAP | 20 | + | NNAT | 20 | + |
| exon-exon | BLOC1S1 | 12 | + | RDH5 | 12 | + |
| exon-exon | BLOC1S1-RDH5 | 12 | + | BLOC1S1-RDH5 | 12 | + |
| exon-intron | BLOC1S3 | 19 | + | EXOC3L2 | 19 | + |
| exon-intron | BLOC1S4 | 4 | - | NOL3 | 16 | - |
| exon-exon | BLOC1S5-TXNDC5 | 6 | + | BLOC1S5-TXNDC5 | 6 | + |
| exon-exon | BLOC1S5-TXNDC5 | 6 | + | BLOC1S5-TXNDC5 | 6 | + |
| exon-exon | BLOC1S5-TXNDC5 | 6 | + | BLOC1S5-TXNDC5 | 6 | + |
| exon-exon | BLOC1S5-TXNDC5 | 6 | + | BLOC1S5-TXNDC5 | 6 | + |
| intron-exon | BLOC1S5-TXNDC5 | 6 | + | LPCAT2 | 16 | - |
| exon-exon | BLOC1S5-TXNDC5 | 6 | - | BLOC1S5-TXNDC5 | 6 | - |
| exon-exon | BLOC1S5-TXNDC5 | 6 | - | BMP6 | 6 | - |
| exon-intron | BLOC1S5-TXNDC5 | 6 | - | AC116337.3 | 5 | + |
| exon-exon | BLOC1S6 | 15 | + | SQOR | 15 | + |
| exon-exon | BMERB1 | 16 | + | MARF1 | 16 | + |
| exon-exon | BMERB1 | 16 | - | MPV17L | 16 | - |
| exon-exon | BMI1 | 10 | - | COMMD3 | 10 | - |
| exon-exon | BMI1 | 10 | - | COMMD3 | 10 | - |
| exon-exon | BMP8B | 1 | - | PPIE | 1 | - |
| exon-exon | BMP8B | 1 | - | PPIE | 1 | - |
| exon-exon | BMP8B | 1 | - | PPIE | 1 | - |
| exon-exon | BMP8B | 1 | - | PPIE | 1 | - |
| exon-exon | BMP8B | 1 | - | PPIE | 1 | - |
| exon-exon | BMPR1B | 4 | - | BMPR1B-DT | 4 | - |
| exon-intron | BMPR2 | 2 | + | EPC1 | 10 | - |
| exon-intron | BMPR2 | 2 | - | ZNF133 | 20 | - |
| exon-intron | BMS1 | 10 | + | CUL2 | 10 | + |
| intron-exon | BMS1P10 | 9 | + | AQP7P1 | 9 | + |
| exon-intron | BMS1P20 | 22 | + | IGL | 22 | + |
| exon-exon | BMS1P4 | 10 | - | AGAP5 | 10 | - |
| exon-exon | BMS1P4 | 10 | - | BMS1P4-AGAP5 | 10 | - |
| exon-exon | BMS1P4 | 10 | - | BMS1P4-AGAP5 | 10 | - |
| exon-intron | BNC2 | 9 | + | ZNF385D | 3 | - |
| exon-intron | BNIP2 | 15 | - | P2RY8 | Y | + |
| exon-intron | BNIP3 | 10 | - | PPP2R2D | 10 | - |
| exon-exon | BNIP3L | 8 | - | MKI67 | 10 | + |
| exon-exon | BNIP3L | 8 | - | PMP22 | 17 | + |
| exon-intron | BOC | 3 | + | PLEKHA7 | 11 | - |
| exon-intron | BOC | 3 | + | SVEP1 | 9 | - |
| exon-exon | BOK | 2 | - | BOK-AS1 | 2 | - |
| exon-intron | BOLA2-SMG1P6 | 16 | - | SMG1P6 | 16 | - |
| exon-intron | BOLA2-SMG1P6 | 16 | - | SMG1P6 | 16 | - |
| exon-intron | BOLA2-SMG1P6 | 16 | - | SMG1P6 | 16 | - |
| exon-exon | BOLA2-SMG1P6 | 16 | - | SMG1P6 | 16 | - |
| exon-intron | BOLA2-SMG1P6 | 16 | - | SMG1P6 | 16 | - |
| exon-exon | BOLA2-SMG1P6 | 16 | - | SMG1P6 | 16 | - |
| exon-exon | BOLA2-SMG1P6 | 16 | - | SMG1P6 | 16 | - |
| exon-exon | BOLA2-SMG1P6 | 16 | - | SMG1P6 | 16 | - |
| exon-intron | BOLA2-SMG1P6 | 16 | - | SMG1P6 | 16 | - |
| exon-intron | BOLA2-SMG1P6 | 16 | - | SMG1P6 | 16 | - |
| exon-exon | BOLA2-SMG1P6 | 16 | - | SMG1P6 | 16 | - |
| exon-intron | BOLA2-SMG1P6 | 16 | - | SMG1P6 | 16 | - |
| exon-exon | BOLA2-SMG1P6 | 16 | - | SMG1P6 | 16 | - |
| exon-intron | BOLA2-SMG1P6 | 16 | - | SMG1P6 | 16 | - |
| exon-exon | BOLA2-SMG1P6 | 16 | - | SMG1P6 | 16 | - |
| exon-exon | BOLA2-SMG1P6 | 16 | - | SMG1P6 | 16 | - |
| exon-intron | BOLA2-SMG1P6 | 16 | - | SMG1P6 | 16 | - |
| exon-exon | BOLA2-SMG1P6 | 16 | - | SMG1P6 | 16 | - |
| exon-exon | BOLA2-SMG1P6 | 16 | - | SMG1P6 | 16 | - |
| exon-exon | BOLA2-SMG1P6 | 16 | - | SMG1P6 | 16 | - |
| exon-exon | BOLA2-SMG1P6 | 16 | - | SMG1P6 | 16 | - |
| exon-exon | BOLA2-SMG1P6 | 16 | - | SMG1P6 | 16 | - |
| exon-exon | BOLA2-SMG1P6 | 16 | - | SMG1P6 | 16 | - |
| exon-intron | BOLA2-SMG1P6 | 16 | - | SMG1P6 | 16 | - |
| intron-exon | BOLA2B | 16 | - | SMG1P2 | 16 | - |
| intron-exon | BOLA2B | 16 | - | SMG1P2 | 16 | - |
| intron-exon | BOLA2B | 16 | - | SMG1P2 | 16 | - |
| intron-exon | BOLA2B | 16 | - | SMG1P2 | 16 | - |
| exon-exon | BOLA2B | 16 | - | SMG1P2 | 16 | - |
| exon-exon | BOLA2B | 16 | - | SMG1P2 | 16 | - |
| exon-exon | BOLA2B | 16 | - | SMG1P2 | 16 | - |
| exon-exon | BOLA2B | 16 | - | SMG1P2 | 16 | - |
| exon-exon | BOLA2B | 16 | - | SMG1P2 | 16 | - |
| exon-exon | BOLA2B | 16 | - | SMG1P2 | 16 | - |
| exon-exon | BOLA2B | 16 | - | SMG1P2 | 16 | - |
| exon-exon | BOLA2B | 16 | - | SMG1P2 | 16 | - |
| exon-exon | BOLA2B | 16 | - | SMG1P2 | 16 | - |
| exon-exon | BOLA2B | 16 | - | SMG1P2 | 16 | - |
| exon-exon | BOLA2B | 16 | - | SMG1P2 | 16 | - |
| exon-exon | BOLA2B | 16 | - | SMG1P2 | 16 | - |
| intron-exon | BOLA2B | 16 | - | SMG1P2 | 16 | - |
| intron-exon | BOLA2B | 16 | - | SMG1P2 | 16 | - |
| exon-exon | BOLA2B | 16 | - | SMG1P2 | 16 | - |
| intron-exon | BOLA2B | 16 | - | SMG1P2 | 16 | - |
| intron-exon | BOLA2B | 16 | - | SMG1P2 | 16 | - |
| intron-exon | BOLA2B | 16 | - | SMG1P2 | 16 | - |
| intron-exon | BOLA2B | 16 | - | SMG1P2 | 16 | - |
| exon-intron | BORA | 13 | - | DIS3 | 13 | - |
| intron-exon | BORCS7-ASMT | 10 | - | PTGES3P4 | 10 | - |
| intron-exon | BORCS7-ASMT | 10 | - | PTGES3P4 | 10 | - |
| exon-exon | BORCS8 | 19 | - | MEF2B | 19 | - |
| exon-exon | BORCS8 | 19 | - | MEF2B | 19 | - |
| exon-intron | BORCS8 | 19 | - | MEF2B | 19 | - |
| exon-exon | BORCS8 | 19 | - | MEF2B | 19 | - |
| exon-exon | BORCS8 | 19 | - | MEF2B | 19 | - |
| exon-exon | BORCS8 | 19 | - | MEF2B | 19 | - |
| intron-exon | BORCS8 | 19 | - | MEF2B | 19 | - |
| intron-exon | BORCS8 | 19 | - | MEF2B | 19 | - |
| exon-exon | BORCS8-MEF2B | 19 | - | BORCS8-MEF2B | 19 | - |
| exon-exon | BORCS8-MEF2B | 19 | - | BORCS8-MEF2B | 19 | - |
| exon-exon | BORCS8-MEF2B | 19 | - | BORCS8-MEF2B | 19 | - |
| exon-exon | BORCS8-MEF2B | 19 | - | BORCS8-MEF2B | 19 | - |
| exon-exon | BORCS8-MEF2B | 19 | - | BORCS8-MEF2B | 19 | - |
| exon-exon | BORCS8-MEF2B | 19 | - | BORCS8-MEF2B | 19 | - |
| exon-exon | BPHL | 6 | - | BPHL | 6 | + |
| exon-exon | BPTF | 17 | + | KPNA2 | 17 | + |
| exon-intron | BPTF | 17 | - | ARHGAP26 | 5 | - |
| exon-intron | BRAF | 7 | - | NDUFB2 | 7 | - |
| intron-exon | BRAP | 12 | - | ATXN2 | 12 | - |
| exon-intron | BRCA2 | 13 | - | SMAP2 | 1 | + |
| exon-exon | BRD1 | 22 | - | BRD1 | 22 | + |
| intron-exon | BRD1 | 22 | - | RSRP1 | 1 | - |
| exon-exon | BRD2 | 6 | - | LOC642846 | 12 | - |
| exon-exon | BRD3 | 9 | - | BRD3OS | 9 | - |
| intron-exon | BRD3 | 9 | - | BRD3OS | 9 | - |
| exon-exon | BRD7 | 16 | - | ADCY7 | 16 | - |
| exon-intron | BRD9 | 5 | + | DGKD | 2 | - |
| exon-intron | BRD9 | 5 | + | DGKD | 2 | - |
| exon-intron | BRDT | 1 | + | RPAP2 | 1 | + |
| intron-exon | BRDT | 1 | + | GDF11 | 12 | + |
| exon-exon | BRF2 | 8 | - | ADGRA2 | 8 | - |
| exon-exon | BRF2 | 8 | - | SOD2 | 6 | - |
| exon-exon | BRICD5 | 16 | - | MLST8 | 16 | - |
| exon-intron | BRICD5 | 16 | - | MLST8 | 16 | - |
| intron-exon | BRIP1 | 17 | + | ANKS3 | 16 | - |
| intron-exon | BRIP1 | 17 | + | ANKS3 | 16 | - |
| exon-exon | BROX | 1 | - | AIDA | 1 | - |
| exon-exon | BROX | 1 | - | AIDA | 1 | - |
| intron-exon | BRPF3 | 6 | - | LOC102723648 | 6 | - |
| exon-intron | BRWD1 | 21 | + | BRWD1-AS1 | 21 | + |
| intron-exon | BSG | 19 | - | LOC105372233 | 19 | - |
| exon-intron | BTBD19 | 1 | - | RNF220 | 1 | - |
| exon-exon | BTD | 3 | - | HACL1 | 3 | - |
| exon-exon | BTD | 3 | - | HACL1 | 3 | - |
| exon-exon | BTD | 3 | - | HACL1 | 3 | - |
| exon-exon | BTD | 3 | - | HACL1 | 3 | - |
| exon-exon | BTD | 3 | - | HACL1 | 3 | - |
| exon-exon | BTD | 3 | - | HACL1 | 3 | - |
| exon-exon | BTD | 3 | - | HACL1 | 3 | - |
| exon-exon | BTD | 3 | - | HACL1 | 3 | - |
| exon-intron | BTD | 3 | - | HACL1 | 3 | - |
| exon-intron | BTD | 3 | - | HACL1 | 3 | - |
| exon-intron | BTD | 3 | - | HACL1 | 3 | - |
| exon-exon | BTD | 3 | - | HACL1 | 3 | - |
| exon-exon | BTD | 3 | - | HACL1 | 3 | - |
| exon-exon | BTD | 3 | - | HACL1 | 3 | - |
| exon-exon | BTD | 3 | - | HACL1 | 3 | - |
| exon-intron | BTD | 3 | - | HACL1 | 3 | - |
| exon-exon | BTD | 3 | - | HACL1 | 3 | - |
| exon-exon | BTD | 3 | - | HACL1 | 3 | - |
| exon-intron | BTD | 3 | - | HACL1 | 3 | - |
| exon-intron | BTD | 3 | - | HACL1 | 3 | - |
| exon-exon | BTD | 3 | - | HACL1 | 3 | - |
| exon-exon | BTD | 3 | - | HACL1 | 3 | - |
| exon-exon | BTD | 3 | - | HACL1 | 3 | - |
| exon-exon | BTD | 3 | - | HACL1 | 3 | - |
| exon-exon | BTD | 3 | - | HACL1 | 3 | - |
| exon-intron | BTD | 3 | - | HACL1 | 3 | - |
| exon-intron | BTD | 3 | - | HACL1 | 3 | - |
| exon-exon | BTD | 3 | - | HACL1 | 3 | - |
| exon-exon | BTD | 3 | - | HACL1 | 3 | - |
| exon-intron | BTD | 3 | - | HACL1 | 3 | - |
| exon-exon | BTD | 3 | - | HACL1 | 3 | - |
| exon-exon | BTD | 3 | - | HACL1 | 3 | - |
| exon-exon | BTD | 3 | - | HACL1 | 3 | - |
| exon-exon | BTD | 3 | - | HACL1 | 3 | - |
| exon-exon | BTD | 3 | - | HACL1 | 3 | - |
| exon-intron | BTD | 3 | - | HACL1 | 3 | - |
| exon-exon | BTD | 3 | - | HACL1 | 3 | - |
| intron-exon | BTG4 | 11 | - | POU2AF1 | 11 | - |
| exon-intron | BTN3A1 | 6 | - | BTN2A2 | 6 | - |
| exon-exon | BTN3A2 | 6 | + | BTN3A1 | 6 | + |
| exon-exon | BUB1B | 15 | + | PAK6 | 15 | + |
| exon-exon | BUB1B | 15 | + | PAK6 | 15 | + |
| exon-intron | BUB1B | 15 | + | BUB1B-PAK6 | 15 | + |
| exon-exon | BUB1B | 15 | + | PAK6 | 15 | + |
| exon-exon | BUB1B-PAK6 | 15 | + | BUB1B-PAK6 | 15 | + |
| exon-exon | BUB1B-PAK6 | 15 | + | BUB1B-PAK6 | 15 | + |
| exon-exon | BUD23 | 7 | + | ZYX | 7 | + |
| exon-exon | BUD31 | 7 | + | ATP5MF-PTCD1 | 7 | + |
| exon-exon | BUD31 | 7 | - | PDAP1 | 7 | - |
| exon-exon | BUD31 | 7 | - | PDAP1 | 7 | - |
| exon-intron | BUD31 | 7 | - | PDAP1 | 7 | - |
| intron-exon | BX119904.2 | X | - | LOC100506955 | X | - |
| intron-exon | BX119904.2 | X | - | LOC100506955 | X | - |
| intron-exon | BZW1-AS1 | 2 | + | BZW1 | 2 | + |
| intron-exon | BZW1-AS1 | 2 | + | BZW1P1 | 3 | - |
| intron-exon | BZW1-AS1 | 2 | - | AOX3P-AOX2P | 2 | - |
| intron-exon | BZW1-AS1 | 2 | - | AOX3P-AOX2P | 2 | - |
| exon-intron | BZW2 | 7 | + | LOC105373303 | X | - |
| exon-exon | C11orf1 | 11 | - | FDXACB1 | 11 | - |
| exon-exon | C11orf1 | 11 | - | FDXACB1 | 11 | - |
| intron-exon | C11orf1 | 11 | - | FDXACB1 | 11 | - |
| intron-exon | C11orf16 | 11 | - | AKIP1 | 11 | - |
| intron-exon | C11orf58 | 11 | - | SOX6 | 11 | - |
| exon-exon | C11orf91 | 11 | + | CD59 | 11 | + |
| exon-exon | C11orf91 | 11 | + | CD59 | 11 | + |
| exon-exon | C11orf91 | 11 | + | CD59 | 11 | + |
| intron-exon | C12orf4 | 12 | - | LOC105369617 | 12 | + |
| exon-intron | C12orf65 | 12 | + | PPP1R32 | 11 | - |
| exon-intron | C12orf65 | 12 | - | TMEM106C | 12 | - |
| intron-exon | C12orf73 | 12 | - | HSP90B1 | 12 | - |
| intron-exon | C12orf73 | 12 | - | HSP90B1 | 12 | - |
| intron-exon | C12orf73 | 12 | - | HSP90B1 | 12 | - |
| intron-exon | C12orf73 | 12 | - | HSP90B1 | 12 | - |
| exon-exon | C12orf75 | 12 | + | LOC105369957 | 12 | + |
| exon-intron | C12orf76 | 12 | - | ANKRD13A | 12 | - |
| exon-intron | C12orf76 | 12 | - | ANKRD13A | 12 | - |
| exon-intron | C12orf76 | 12 | - | ANKRD13A | 12 | - |
| exon-intron | C12orf76 | 12 | - | ANKRD13A | 12 | - |
| exon-intron | C12orf76 | 12 | - | ANKRD13A | 12 | - |
| exon-intron | C12orf76 | 12 | - | ANKRD13A | 12 | - |
| exon-intron | C12orf76 | 12 | - | ANKRD13A | 12 | - |
| exon-intron | C12orf76 | 12 | - | ANKRD13A | 12 | - |
| exon-intron | C12orf76 | 12 | - | ANKRD13A | 12 | - |
| exon-intron | C12orf76 | 12 | - | ANKRD13A | 12 | - |
| exon-intron | C12orf76 | 12 | - | ANKRD13A | 12 | - |
| exon-intron | C12orf76 | 12 | - | ANKRD13A | 12 | - |
| exon-intron | C12orf76 | 12 | - | ANKRD13A | 12 | - |
| exon-intron | C12orf76 | 12 | - | ANKRD13A | 12 | - |
| exon-intron | C12orf76 | 12 | - | ANKRD13A | 12 | - |
| intron-exon | C14orf178 | 14 | - | SNW1 | 14 | - |
| intron-exon | C14orf178 | 14 | - | SNW1 | 14 | - |
| intron-exon | C14orf178 | 14 | - | SNW1 | 14 | - |
| intron-exon | C14orf178 | 14 | - | SNW1 | 14 | - |
| intron-exon | C14orf178 | 14 | - | SNW1 | 14 | - |
| intron-exon | C14orf178 | 14 | - | SNW1 | 14 | - |
| intron-exon | C14orf178 | 14 | - | SNW1 | 14 | - |
| intron-exon | C14orf178 | 14 | - | SNW1 | 14 | - |
| intron-exon | C14orf178 | 14 | - | SNW1 | 14 | - |
| intron-exon | C14orf178 | 14 | - | SNW1 | 14 | - |
| intron-exon | C14orf178 | 14 | - | SNW1 | 14 | - |
| intron-exon | C14orf178 | 14 | - | SNW1 | 14 | - |
| intron-exon | C14orf178 | 14 | - | SNW1 | 14 | - |
| intron-exon | C14orf178 | 14 | - | SNW1 | 14 | - |
| intron-exon | C14orf178 | 14 | - | SNW1 | 14 | - |
| intron-exon | C14orf178 | 14 | - | SNW1 | 14 | - |
| intron-exon | C14orf178 | 14 | - | SNW1 | 14 | - |
| intron-exon | C14orf178 | 14 | - | SNW1 | 14 | - |
| intron-exon | C14orf178 | 14 | - | SNW1 | 14 | - |
| intron-exon | C14orf178 | 14 | - | SNW1 | 14 | - |
| intron-exon | C14orf178 | 14 | - | SNW1 | 14 | - |
| intron-exon | C14orf178 | 14 | - | SNW1 | 14 | - |
| intron-exon | C14orf178 | 14 | - | SNW1 | 14 | - |
| intron-exon | C14orf178 | 14 | - | SNW1 | 14 | - |
| intron-exon | C14orf178 | 14 | - | SNW1 | 14 | - |
| intron-exon | C14orf178 | 14 | - | SNW1 | 14 | - |
| intron-exon | C14orf178 | 14 | - | SNW1 | 14 | - |
| intron-exon | C14orf178 | 14 | - | SNW1 | 14 | - |
| intron-exon | C15orf40 | 15 | - | RAMAC | 15 | - |
| intron-exon | C15orf40 | 15 | - | RAMAC | 15 | - |
| exon-exon | C15orf40 | 15 | - | ZKSCAN3 | 6 | + |
| exon-exon | C15orf48 | 15 | + | LOC105376714 | 15 | + |
| intron-exon | C15orf65 | 15 | + | DNAAF4-CCPG1 | 15 | + |
| exon-intron | C16orf70 | 16 | - | SNTB2 | 16 | + |
| exon-exon | C16orf74 | 16 | - | GINS2 | 16 | - |
| exon-exon | C16orf91 | 16 | + | LOC647211 | 16 | + |
| exon-exon | C16orf95 | 16 | + | FBXO31 | 16 | + |
| exon-exon | C16orf96 | 16 | - | CDIP1 | 16 | - |
| exon-exon | C16orf96 | 16 | - | CDIP1 | 16 | - |
| exon-exon | C16orf96 | 16 | - | CDIP1 | 16 | - |
| exon-exon | C16orf96 | 16 | - | CDIP1 | 16 | - |
| exon-exon | C16orf96 | 16 | - | CDIP1 | 16 | - |
| exon-exon | C16orf96 | 16 | - | CDIP1 | 16 | - |
| exon-intron | C16orf96 | 16 | - | CDIP1 | 16 | - |
| exon-exon | C16orf96 | 16 | - | CDIP1 | 16 | - |
| exon-exon | C16orf96 | 16 | - | CDIP1 | 16 | - |
| intron-exon | C16orf96 | 16 | - | CDIP1 | 16 | - |
| intron-exon | C16orf96 | 16 | - | CDIP1 | 16 | - |
| intron-exon | C16orf96 | 16 | - | CDIP1 | 16 | - |
| intron-exon | C16orf96 | 16 | - | CDIP1 | 16 | - |
| intron-exon | C16orf96 | 16 | - | CDIP1 | 16 | - |
| intron-exon | C16orf96 | 16 | - | CDIP1 | 16 | - |
| intron-exon | C16orf96 | 16 | - | CDIP1 | 16 | - |
| intron-exon | C16orf96 | 16 | - | CDIP1 | 16 | - |
| intron-exon | C16orf96 | 16 | - | CDIP1 | 16 | - |
| exon-exon | C17orf80 | 17 | + | CPSF4L | 17 | + |
| exon-exon | C17orf80 | 17 | - | FAM104A | 17 | - |
| exon-exon | C17orf99 | 17 | - | EXT2 | 11 | - |
| exon-intron | C19orf25 | 19 | - | APC2 | 19 | - |
| exon-intron | C19orf25 | 19 | - | APC2 | 19 | - |
| intron-exon | C19orf38 | 19 | - | HIKESHI | 11 | - |
| intron-exon | C19orf38 | 19 | - | HIKESHI | 11 | - |
| exon-intron | C19orf47 | 19 | + | YEATS2 | 3 | + |
| exon-exon | C19orf54 | 19 | + | SNRPA | 19 | + |
| exon-exon | C19orf54 | 19 | + | SNRPA | 19 | + |
| exon-exon | C19orf54 | 19 | + | SNRPA | 19 | + |
| exon-exon | C19orf54 | 19 | + | SNRPA | 19 | + |
| exon-exon | C19orf54 | 19 | + | SNRPA | 19 | + |
| exon-exon | C19orf54 | 19 | + | SNRPA | 19 | + |
| exon-exon | C19orf81 | 19 | - | SYT3 | 19 | - |
| exon-exon | C1QA | 1 | - | C1QA | 1 | + |
| exon-exon | C1QBP | 17 | - | RPAIN | 17 | - |
| intron-exon | C1QTNF3 | 5 | - | ESCO1 | 18 | - |
| intron-exon | C1QTNF3 | 5 | - | ESCO1 | 18 | - |
| intron-exon | C1QTNF3 | 5 | - | ESCO1 | 18 | - |
| intron-exon | C1QTNF3-AMACR | 5 | + | C1QTNF3 | 5 | + |
| intron-exon | C1QTNF3-AMACR | 5 | + | C1QTNF3 | 5 | + |
| exon-exon | C1QTNF3-AMACR | 5 | + | C1QTNF3 | 5 | + |
| exon-exon | C1QTNF3-AMACR | 5 | + | C1QTNF3 | 5 | + |
| exon-exon | C1QTNF3-AMACR | 5 | + | C1QTNF3 | 5 | + |
| exon-exon | C1QTNF3-AMACR | 5 | + | C1QTNF3 | 5 | + |
| exon-exon | C1QTNF3-AMACR | 5 | - | C1QTNF3-AMACR | 5 | - |
| exon-exon | C1QTNF3-AMACR | 5 | - | C1QTNF3-AMACR | 5 | - |
| exon-exon | C1QTNF3-AMACR | 5 | - | C1QTNF3-AMACR | 5 | - |
| exon-exon | C1QTNF3-AMACR | 5 | - | C1QTNF3-AMACR | 5 | - |
| exon-exon | C1QTNF6 | 22 | - | IL2RB | 22 | - |
| exon-exon | C1QTNF6 | 22 | - | IL2RB | 22 | - |
| exon-exon | C1RL | 12 | + | C1RL | 12 | - |
| intron-exon | C1RL-AS1 | 12 | - | C1RL | 12 | - |
| intron-exon | C1RL-AS1 | 12 | - | C1RL | 12 | - |
| intron-exon | C1RL-AS1 | 12 | - | C1RL | 12 | - |
| intron-exon | C1RL-AS1 | 12 | - | C1RL | 12 | - |
| intron-exon | C1RL-AS1 | 12 | - | C1RL | 12 | - |
| intron-exon | C1RL-AS1 | 12 | - | C1RL | 12 | - |
| intron-exon | C1RL-AS1 | 12 | - | C1RL | 12 | - |
| intron-exon | C1RL-AS1 | 12 | - | C1RL | 12 | - |
| intron-exon | C1RL-AS1 | 12 | - | C1RL | 12 | - |
| intron-exon | C1RL-AS1 | 12 | - | C1RL | 12 | - |
| intron-exon | C1RL-AS1 | 12 | - | C1RL | 12 | - |
| intron-exon | C1orf112 | 1 | - | SELP | 1 | - |
| intron-exon | C1orf112 | 1 | - | METTL18 | 1 | - |
| intron-exon | C1orf112 | 1 | - | METTL18 | 1 | - |
| intron-exon | C1orf112 | 1 | - | METTL18 | 1 | - |
| intron-exon | C1orf112 | 1 | - | METTL18 | 1 | - |
| exon-exon | C1orf116 | 1 | - | C1orf116 | 1 | + |
| intron-exon | C1orf194 | 1 | + | ELAPOR1 | 1 | + |
| intron-exon | C1orf21 | 1 | - | ATG12 | 5 | - |
| exon-exon | C1orf220 | 1 | - | TEX35 | 1 | - |
| exon-intron | C1orf43 | 1 | + | UBAP2L | 1 | + |
| exon-intron | C1orf61 | 1 | - | TDRD12 | 19 | - |
| exon-intron | C1orf61 | 1 | - | LOC105369833 | 12 | - |
| exon-exon | C1orf74 | 1 | - | TRAF3IP3 | 1 | - |
| exon-exon | C1orf74 | 1 | - | TRAF3IP3 | 1 | - |
| exon-exon | C1orf74 | 1 | - | TRAF3IP3 | 1 | - |
| exon-exon | C1orf74 | 1 | - | TRAF3IP3 | 1 | - |
| exon-exon | C1orf74 | 1 | - | TRAF3IP3 | 1 | - |
| exon-exon | C1orf74 | 1 | - | TRAF3IP3 | 1 | - |
| exon-exon | C1orf74 | 1 | - | TRAF3IP3 | 1 | - |
| exon-exon | C1orf74 | 1 | - | TRAF3IP3 | 1 | - |
| intron-exon | C2 | 6 | + | CFB | 6 | + |
| intron-exon | C2-AS1 | 6 | - | C2 | 6 | - |
| intron-exon | C2-AS1 | 6 | - | C2 | 6 | - |
| exon-exon | C2-AS1 | 6 | - | C2 | 6 | - |
| intron-exon | C22orf15 | 22 | + | CHCHD10 | 22 | + |
| intron-exon | C22orf23 | 22 | + | POLR2F | 22 | + |
| intron-exon | C22orf23 | 22 | - | MICALL1 | 22 | - |
| intron-exon | C22orf23 | 22 | - | MICALL1 | 22 | - |
| intron-exon | C22orf24 | 22 | + | YWHAH | 22 | + |
| exon-exon | C22orf39 | 22 | - | PHF19 | 9 | - |
| exon-exon | C22orf39 | 22 | - | HIRA | 22 | - |
| exon-exon | C22orf39 | 22 | - | HIRA | 22 | - |
| exon-exon | C22orf39 | 22 | - | HIRA | 22 | - |
| exon-exon | C22orf39 | 22 | - | HIRA | 22 | - |
| exon-exon | C22orf39 | 22 | - | HIRA | 22 | - |
| intron-exon | C22orf46 | 22 | - | SNU13 | 22 | - |
| intron-exon | C22orf46 | 22 | - | SNU13 | 22 | - |
| exon-exon | C2orf15 | 2 | + | MRPL30 | 2 | + |
| exon-intron | C2orf49 | 2 | + | SFXN3 | 10 | + |
| exon-intron | C2orf69 | 2 | + | MAIP1 | 2 | + |
| intron-exon | C2orf88 | 2 | + | HIBCH | 2 | + |
| intron-exon | C3orf18 | 3 | + | HEMK1 | 3 | + |
| exon-exon | C3orf33 | 3 | + | C3orf33 | 3 | - |
| exon-exon | C4A | 6 | + | C4B | 6 | + |
| exon-intron | C4A | 6 | + | LOC110631417 | 6 | + |
| intron-exon | C4orf45 | 4 | - | RPS20 | 8 | - |
| exon-intron | C5AR1 | 19 | - | ZC3H4 | 19 | - |
| intron-exon | C5orf66 | 5 | - | PITX1 | 5 | - |
| intron-exon | C5orf66 | 5 | - | PITX1 | 5 | - |
| intron-exon | C5orf66 | 5 | - | PITX1 | 5 | - |
| intron-exon | C5orf66 | 5 | - | PITX1 | 5 | - |
| intron-exon | C5orf67 | 5 | + | LOC105378978 | 5 | + |
| exon-intron | C6orf120 | 6 | + | CLIC2 | X | - |
| intron-exon | C7orf50 | 7 | + | GPR146 | 7 | + |
| exon-exon | C7orf61 | 7 | + | TSC22D4 | 7 | + |
| intron-exon | C8orf37-AS1 | 8 | - | C8orf37 | 8 | - |
| intron-exon | C8orf37-AS1 | 8 | - | C8orf37 | 8 | - |
| exon-intron | C8orf44 | 8 | + | SGK3 | 8 | + |
| exon-exon | C8orf44 | 8 | + | SGK3 | 8 | + |
| exon-exon | C8orf44-SGK3 | 8 | - | C8orf44-SGK3 | 8 | - |
| exon-exon | C8orf44-SGK3 | 8 | - | C8orf44-SGK3 | 8 | - |
| intron-exon | C8orf76 | 8 | + | ZHX1-C8orf76 | 8 | + |
| exon-exon | C8orf76 | 8 | + | ZHX1-C8orf76 | 8 | + |
| exon-exon | C8orf76 | 8 | + | ZHX1-C8orf76 | 8 | + |
| exon-exon | C8orf76 | 8 | + | ZHX1-C8orf76 | 8 | + |
| exon-exon | C8orf76 | 8 | + | ZHX1-C8orf76 | 8 | + |
| exon-exon | C8orf76 | 8 | + | ZHX1-C8orf76 | 8 | + |
| exon-exon | C8orf82 | 8 | - | LRRC24 | 8 | - |
| intron-exon | C9orf129 | 9 | - | WNK2 | 9 | - |
| exon-exon | C9orf139 | 9 | + | NPDC1 | 9 | + |
| intron-exon | C9orf139 | 9 | + | NPDC1 | 9 | + |
| intron-exon | C9orf147 | 9 | - | HSDL2 | 9 | - |
| intron-exon | C9orf147 | 9 | - | HSDL2 | 9 | - |
| intron-exon | C9orf147 | 9 | - | HSDL2 | 9 | - |
| exon-exon | C9orf47 | 9 | + | S1PR3 | 9 | + |
| exon-intron | C9orf64 | 9 | - | DLGAP4 | 20 | - |
| exon-intron | C9orf64 | 9 | - | MSC-AS1 | 8 | + |
| exon-intron | C9orf64 | 9 | - | BFAR | 16 | + |
| exon-intron | C9orf78 | 9 | + | SRSF11 | 1 | - |
| exon-intron | C9orf85 | 9 | - | PISD | 22 | + |
| intron-exon | CA1 | 8 | + | CA3 | 8 | + |
| exon-intron | CA11 | 19 | + | SEC1P | 19 | + |
| exon-intron | CA11 | 19 | + | SEC1P | 19 | + |
| intron-exon | CA3-AS1 | 8 | + | CA2 | 8 | + |
| intron-exon | CABIN1 | 22 | + | CLN8 | 8 | - |
| exon-exon | CABP7 | 22 | + | ZMAT5 | 22 | + |
| intron-exon | CACNA1A | 19 | - | CDK13 | 7 | - |
| exon-exon | CACNA1A | 19 | - | LOC107985287 | 19 | - |
| exon-exon | CACNA1A | 19 | - | LOC107985287 | 19 | - |
| intron-exon | CACNA1B | 9 | + | MIR4697HG | 11 | - |
| exon-exon | CACNA1D | 3 | + | CHDH | 3 | + |
| intron-exon | CACNA1S | 1 | - | LOC101929305 | 1 | - |
| exon-intron | CACNB1 | 17 | - | LOC105371768 | 17 | - |
| exon-exon | CACYBP | 1 | + | MRPS14 | 1 | + |
| intron-exon | CACYBP | 1 | - | LOC105371622 | 1 | - |
| exon-exon | CACYBP | 1 | - | CACYBPP2 | 2 | + |
| exon-exon | CADM3 | 1 | - | DDX42 | 17 | - |
| exon-exon | CADM3-AS1 | 1 | - | CADM3 | 1 | - |
| exon-exon | CADM3-AS1 | 1 | - | CADM3 | 1 | - |
| exon-exon | CADM3-AS1 | 1 | - | CADM3 | 1 | - |
| intron-exon | CAGE1 | 6 | - | SSR1 | 6 | - |
| intron-exon | CAGE1 | 6 | - | SSR1 | 6 | - |
| exon-exon | CALD1 | 7 | - | PGA4 | 11 | + |
| exon-exon | CALM1 | 14 | + | MINK1 | 17 | + |
| exon-intron | CALM1 | 14 | - | ABI2 | 2 | - |
| exon-intron | CALM2 | 2 | - | BCL2L13 | 22 | - |
| exon-exon | CALM2 | 2 | - | STPG4 | 2 | - |
| exon-exon | CALM2 | 2 | - | STPG4 | 2 | - |
| exon-exon | CALML4 | 15 | - | PIAS1 | 15 | - |
| exon-exon | CALU | 7 | + | CLCA4 | 1 | - |
| exon-exon | CALU | 7 | + | CLCA4 | 1 | - |
| exon-exon | CALU | 7 | + | CALU | 7 | - |
| exon-exon | CALU | 7 | - | GPR19 | 12 | + |
| exon-exon | CAMK1 | 3 | - | OGG1 | 3 | - |
| exon-exon | CAMK1D | 10 | - | CAMK1D | 10 | + |
| exon-intron | CAMK2N1 | 1 | + | BRINP3 | 1 | - |
| exon-intron | CAMK2N1 | 1 | + | BRINP3 | 1 | - |
| exon-intron | CAMK2N1 | 1 | + | BRINP3 | 1 | - |
| intron-exon | CAMKK1 | 17 | + | LPXN | 11 | + |
| exon-intron | CAMKK2 | 12 | + | VAV2 | 9 | - |
| exon-exon | CAND1 | 12 | + | PHF13 | 1 | + |
| exon-exon | CAND1.11 | 11 | + | AMPD3 | 11 | + |
| exon-exon | CANX | 5 | + | TGM2 | 20 | - |
| exon-exon | CANX | 5 | - | KIFC3 | 16 | + |
| exon-exon | CAPN10 | 2 | + | GPR35 | 2 | + |
| exon-exon | CAPN12 | 19 | - | ACTN4 | 19 | - |
| exon-exon | CAPN12 | 19 | - | ACTN4 | 19 | - |
| exon-exon | CAPN12 | 19 | - | ACTN4 | 19 | - |
| exon-exon | CAPN12 | 19 | - | ACTN4 | 19 | - |
| exon-exon | CAPN12 | 19 | - | ACTN4 | 19 | - |
| exon-exon | CAPN12 | 19 | - | ACTN4 | 19 | - |
| intron-exon | CAPN9 | 1 | - | AGT | 1 | - |
| intron-exon | CAPNS1 | 19 | + | MBP | 18 | - |
| exon-exon | CAPNS1 | 19 | - | PSMB7 | 9 | - |
| intron-exon | CAPZA1 | 1 | - | ST7L | 1 | - |
| exon-intron | CAPZA1 | 1 | - | ZNF609 | 15 | - |
| exon-intron | CAPZB | 1 | - | LOC642846 | 12 | + |
| exon-intron | CAPZB | 1 | - | RBSN | 3 | + |
| exon-exon | CAPZB | 1 | - | CAPZB | 1 | + |
| intron-exon | CARD14 | 17 | - | STK4 | 20 | - |
| exon-intron | CARD8 | 19 | - | ZSWIM9 | 19 | - |
| exon-exon | CARF | 2 | - | WDR12 | 2 | - |
| intron-exon | CARF | 2 | - | WDR12 | 2 | - |
| exon-exon | CARHSP1 | 16 | - | LOC100130283 | 16 | - |
| exon-exon | CARM1 | 19 | + | SLC30A6 | 2 | - |
| exon-intron | CARM1 | 19 | + | TTN-AS1 | 2 | + |
| exon-intron | CARMIL1 | 6 | + | AC034268.2 | 17 | - |
| intron-exon | CARMIL2 | 16 | + | ACD | 16 | + |
| exon-intron | CARNS1 | 11 | - | PPP1CA | 11 | - |
| exon-intron | CARNS1 | 11 | - | PPP1CA | 11 | - |
| exon-exon | CARNS1 | 11 | - | PPP1CA | 11 | - |
| exon-intron | CARNS1 | 11 | - | PPP1CA | 11 | - |
| exon-intron | CARNS1 | 11 | - | PPP1CA | 11 | - |
| exon-exon | CARNS1 | 11 | - | PPP1CA | 11 | - |
| exon-exon | CARS1 | 11 | + | CARS1-AS1 | 11 | + |
| exon-intron | CARS1 | 11 | + | CARS1-AS1 | 11 | + |
| exon-intron | CARS1 | 11 | + | CARS1-AS1 | 11 | + |
| exon-exon | CASC1 | 12 | - | IRAG2 | 12 | - |
| exon-exon | CASC1 | 12 | - | IRAG2 | 12 | - |
| exon-exon | CASC1 | 12 | - | IRAG2 | 12 | - |
| exon-exon | CASC3 | 17 | - | CASC3 | 17 | + |
| exon-exon | CASKIN1 | 16 | - | TRAF7 | 16 | - |
| exon-exon | CASKIN2 | 17 | - | TMEM94 | 17 | - |
| exon-exon | CAST | 5 | + | LOC102724748 | 5 | + |
| intron-exon | CATIP-AS1 | 2 | - | CATIP | 2 | - |
| exon-exon | CATIP-AS1 | 2 | - | CATIP | 2 | - |
| exon-exon | CATSPER2 | 15 | + | PPIP5K1P1 | 15 | + |
| exon-exon | CATSPER2P1 | 15 | - | STRC | 15 | - |
| intron-exon | CATSPER3 | 5 | - | PCBD2 | 5 | - |
| exon-exon | CATSPERB | 14 | + | TC2N | 14 | + |
| exon-exon | CATSPERB | 14 | + | TC2N | 14 | + |
| exon-exon | CATSPERD | 19 | - | LONP1 | 19 | - |
| exon-exon | CATSPERD | 19 | - | LONP1 | 19 | - |
| exon-exon | CATSPERE | 1 | - | ADSS2 | 1 | - |
| exon-exon | CATSPERE | 1 | - | ADSS2 | 1 | - |
| exon-exon | CAV3 | 3 | + | LOC107984112 | 3 | + |
| exon-exon | CAVIN1 | 17 | + | CDC42EP5 | 19 | - |
| exon-exon | CAVIN3 | 11 | + | LOC101927825 | 11 | + |
| exon-exon | CAVIN3 | 11 | + | LOC101927825 | 11 | + |
| exon-exon | CAVIN3 | 11 | + | LOC101927825 | 11 | + |
| exon-exon | CAVIN3 | 11 | + | LOC101927825 | 11 | + |
| exon-exon | CAVIN3 | 11 | + | LOC101927825 | 11 | + |
| exon-intron | CAVIN3 | 11 | + | LOC101927825 | 11 | + |
| intron-exon | CBFB | 16 | + | CYP3A4 | 7 | - |
| intron-exon | CBFB | 16 | + | MYH11 | 16 | - |
| intron-exon | CBWD4P | 9 | + | CBWD5 | 9 | + |
| intron-exon | CBWD5 | 9 | - | LOC105379251 | 9 | - |
| exon-intron | CBWD5 | 9 | - | CD59 | 11 | - |
| exon-intron | CBX3 | 7 | + | LOC107986490 | 5 | + |
| exon-exon | CBX3 | 7 | - | CCDC32 | 15 | + |
| exon-intron | CBX3 | 7 | - | CCDC32 | 15 | + |
| exon-exon | CBX3P9 | 6 | + | CBX3 | 7 | - |
| exon-exon | CBY2 | 13 | - | LINC01055 | 13 | - |
| exon-exon | CBY2 | 13 | - | LINC01055 | 13 | - |
| exon-exon | CC2D1A | 19 | - | C19orf57 | 19 | - |
| exon-intron | CC2D2A | 4 | + | FBXL5 | 4 | + |
| exon-intron | CCAR1 | 10 | - | CYP51A1 | 7 | + |
| exon-intron | CCAT1 | 8 | - | CENPBD1P1 | 19 | - |
| exon-exon | CCAT1 | 8 | - | RPL23AP82 | 22 | - |
| intron-exon | CCBE1 | 18 | + | UBR4 | 1 | - |
| intron-exon | CCBE1 | 18 | - | CLTA | 9 | - |
| exon-exon | CCDC105 | 19 | - | SLC1A6 | 19 | - |
| exon-intron | CCDC124 | 19 | + | LGI3 | 8 | + |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| intron-exon | CCDC125 | 5 | - | CDK7P1 | 2 | + |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| intron-exon | CCDC125 | 5 | - | CDK7 | 5 | - |
| exon-exon | CCDC13 | 3 | + | HIGD1AP1 | 12 | - |
| exon-exon | CCDC13 | 3 | - | HHATL | 3 | - |
| exon-exon | CCDC142 | 2 | - | MRPL53 | 2 | - |
| exon-exon | CCDC144A | 17 | + | USP32P1 | 17 | + |
| intron-exon | CCDC144CP | 17 | + | USP32P3 | 17 | + |
| intron-exon | CCDC144NL | 17 | + | CCDC144NL-AS1 | 17 | + |
| intron-exon | CCDC144NL | 17 | + | CCDC144NL-AS1 | 17 | + |
| exon-intron | CCDC146 | 7 | + | GSAP | 7 | + |
| exon-exon | CCDC157 | 22 | + | RNF215 | 22 | + |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-intron | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-intron | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-intron | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-intron | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-intron | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| exon-exon | CCDC157 | 22 | - | SF3A1 | 22 | - |
| intron-exon | CCDC169 | 13 | - | SOHLH2 | 13 | - |
| exon-exon | CCDC169 | 13 | - | SOHLH2 | 13 | - |
| exon-exon | CCDC169 | 13 | - | SOHLH2 | 13 | - |
| exon-exon | CCDC169 | 13 | - | SOHLH2 | 13 | - |
| exon-exon | CCDC169 | 13 | - | SOHLH2 | 13 | - |
| exon-intron | CCDC175 | 14 | - | L3HYPDH | 14 | - |
| exon-intron | CCDC18 | 1 | + | PTPN1 | 20 | - |
| exon-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| exon-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| exon-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| exon-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| exon-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| exon-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| exon-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| exon-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| exon-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| exon-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| exon-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| exon-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| exon-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| exon-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| exon-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| intron-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| exon-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| exon-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| intron-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| intron-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| exon-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| intron-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| intron-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| exon-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| intron-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| exon-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| intron-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| intron-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| exon-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| exon-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| exon-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| exon-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| exon-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| exon-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| exon-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| exon-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| exon-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| exon-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| exon-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| exon-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| exon-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| exon-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| exon-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| exon-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| exon-exon | CCDC18 | 1 | - | TMED5 | 1 | - |
| exon-intron | CCDC187 | 9 | - | LOC101928722 | 9 | - |
| exon-exon | CCDC189 | 16 | - | PHKG2 | 16 | - |
| intron-exon | CCDC192 | 5 | + | LINC01184 | 5 | + |
| exon-intron | CCDC200 | 17 | - | TMEM106A | 17 | - |
| exon-intron | CCDC25 | 8 | - | RPS10-NUDT3 | 6 | + |
| exon-intron | CCDC32 | 15 | - | AC091045.1 | 15 | - |
| exon-exon | CCDC39 | 3 | - | TTC14 | 3 | - |
| exon-exon | CCDC39 | 3 | - | TTC14 | 3 | - |
| exon-intron | CCDC43 | 17 | + | LOC105371792 | 17 | + |
| intron-exon | CCDC43 | 17 | - | MEIOC | 17 | - |
| intron-exon | CCDC59 | 12 | - | LOC105369873 | 12 | - |
| exon-exon | CCDC6 | 10 | - | RET | 10 | + |
| intron-exon | CCDC69 | 5 | + | LOC105378230 | 5 | + |
| exon-intron | CCDC69 | 5 | - | LOC105369625 | 12 | - |
| exon-exon | CCDC73 | 11 | - | EIF3M | 11 | - |
| exon-exon | CCDC73 | 11 | - | EIF3M | 11 | - |
| exon-exon | CCDC73 | 11 | - | EIF3M | 11 | - |
| exon-exon | CCDC73 | 11 | - | EIF3M | 11 | - |
| exon-exon | CCDC73 | 11 | - | EIF3M | 11 | - |
| exon-exon | CCDC73 | 11 | - | EIF3M | 11 | - |
| exon-exon | CCDC73 | 11 | - | EIF3M | 11 | - |
| exon-exon | CCDC73 | 11 | - | EIF3M | 11 | - |
| exon-exon | CCDC77 | 12 | - | KDM5A | 12 | - |
| exon-intron | CCDC84 | 11 | + | ARL14EPL | 5 | + |
| exon-exon | CCDC85C | 14 | - | CCNK | 14 | - |
| exon-exon | CCDC85C | 14 | - | CCNK | 14 | - |
| exon-exon | CCDC85C | 14 | - | CCNK | 14 | - |
| exon-exon | CCDC85C | 14 | - | CCNK | 14 | - |
| exon-exon | CCDC85C | 14 | - | CCNK | 14 | - |
| exon-exon | CCDC85C | 14 | - | CCNK | 14 | - |
| exon-exon | CCDC88A | 2 | + | CCDC88A | 2 | - |
| exon-exon | CCDC91 | 12 | + | LOC101928705 | 12 | + |
| exon-exon | CCDC91 | 12 | + | LOC101928705 | 12 | + |
| exon-intron | CCDC91 | 12 | - | LOC107984462 | 12 | - |
| intron-exon | CCDC91 | 12 | - | H3P6 | 2 | + |
| exon-exon | CCDC92 | 12 | + | BDKRB2 | 14 | - |
| exon-exon | CCER2 | 19 | - | NFKBIB | 19 | - |
| exon-exon | CCER2 | 19 | - | NFKBIB | 19 | - |
| exon-exon | CCER2 | 19 | - | NFKBIB | 19 | - |
| exon-exon | CCER2 | 19 | - | NFKBIB | 19 | - |
| exon-exon | CCER2 | 19 | - | NFKBIB | 19 | - |
| exon-exon | CCER2 | 19 | - | NFKBIB | 19 | - |
| exon-exon | CCER2 | 19 | - | NFKBIB | 19 | - |
| exon-exon | CCER2 | 19 | - | NFKBIB | 19 | - |
| exon-exon | CCER2 | 19 | - | NFKBIB | 19 | - |
| exon-exon | CCER2 | 19 | - | NFKBIB | 19 | - |
| exon-exon | CCER2 | 19 | - | NFKBIB | 19 | - |
| exon-exon | CCHCR1 | 6 | + | TCF19 | 6 | + |
| exon-intron | CCL11 | 17 | + | C12orf42 | 12 | - |
| exon-intron | CCL4L2 | 17 | + | KANSL1 | 17 | + |
| exon-exon | CCN4 | 8 | - | LOC102723635 | 8 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-intron | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-intron | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-intron | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-intron | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-intron | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-intron | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-intron | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-intron | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-intron | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-intron | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-exon | CCNA2 | 4 | - | EXOSC9 | 4 | - |
| exon-intron | CCNB1 | 5 | + | ULK4 | 3 | - |
| exon-intron | CCNB1 | 5 | + | ULK4 | 3 | - |
| intron-exon | CCNC | 6 | - | TSTD3 | 6 | - |
| exon-intron | CCND1 | 11 | + | DAB1 | 1 | + |
| exon-intron | CCND1 | 11 | + | LTO1 | 11 | + |
| intron-exon | CCND2-AS1 | 12 | + | CCND2 | 12 | + |
| exon-exon | CCND3 | 6 | - | LARP4B | 10 | - |
| exon-intron | CCNDBP1 | 15 | - | TMEM62 | 15 | - |
| exon-intron | CCNE2 | 8 | - | INTS8 | 8 | - |
| intron-exon | CCNH | 5 | - | RASA1 | 5 | - |
| exon-intron | CCNI | 4 | + | UBE2W | 8 | + |
| exon-exon | CCNP | 19 | + | CCNP | 19 | - |
| intron-exon | CCNT2-AS1 | 2 | + | CCNT2 | 2 | + |
| intron-exon | CCNT2-AS1 | 2 | - | TMEM163 | 2 | - |
| exon-intron | CCNY | 10 | + | DCTN6 | 8 | + |
| exon-intron | CCT3 | 1 | - | TSACC | 1 | - |
| exon-exon | CCT6A | 7 | - | TUBA1A | 12 | + |
| exon-exon | CCT6A | 7 | - | TUBA1B | 12 | + |
| exon-exon | CCT6A | 7 | - | ITCH | 20 | - |
| exon-intron | CCT8 | 21 | - | GTF2IP4 | 7 | + |
| exon-intron | CCZ1 | 7 | + | RSPH10B | 7 | + |
| exon-exon | CCZ1 | 7 | + | RSPH10B | 7 | + |
| exon-exon | CCZ1 | 7 | - | CCZ1B | 7 | + |
| exon-exon | CCZ1B | 7 | + | LOC107986696 | 7 | + |
| exon-exon | CCZ1B | 7 | + | CCZ1 | 7 | - |
| exon-intron | CD109 | 6 | + | SHPRH | 6 | - |
| intron-exon | CD160 | 1 | - | PDZK1 | 1 | - |
| intron-exon | CD160 | 1 | - | PDZK1 | 1 | - |
| exon-exon | CD19 | 16 | - | RABEP2 | 16 | - |
| intron-exon | CD1B | 1 | + | CD1C | 1 | + |
| exon-exon | CD200R1L-AS1 | 3 | + | CD200R1L | 3 | + |
| exon-intron | CD226 | 18 | - | DOK6 | 18 | - |
| exon-intron | CD27-AS1 | 12 | + | CD27 | 12 | + |
| exon-intron | CD36 | 7 | + | GNAT3 | 7 | + |
| exon-exon | CD37 | 19 | - | SLC6A16 | 19 | - |
| exon-exon | CD40 | 20 | + | CD40 | 20 | - |
| exon-exon | CD44 | 11 | - | PTGES3 | 12 | + |
| intron-exon | CD52 | 1 | - | UBXN11 | 1 | - |
| intron-exon | CD52 | 1 | - | UBXN11 | 1 | - |
| intron-exon | CD52 | 1 | - | UBXN11 | 1 | - |
| exon-exon | CD59 | 11 | - | CD59 | 11 | + |
| exon-exon | CD59 | 11 | - | C11orf91 | 11 | - |
| exon-exon | CD59 | 11 | - | C11orf91 | 11 | - |
| exon-exon | CD59 | 11 | - | C11orf91 | 11 | - |
| exon-exon | CD63 | 12 | - | HCFC1R1 | 16 | - |
| exon-exon | CD74 | 5 | + | CD74 | 5 | - |
| exon-exon | CD74 | 5 | + | CD74 | 5 | - |
| exon-exon | CD74 | 5 | + | CD74 | 5 | - |
| exon-exon | CD74 | 5 | + | CD74 | 5 | - |
| exon-exon | CD74 | 5 | - | CD74 | 5 | + |
| exon-exon | CD74 | 5 | - | ROS1 | 6 | - |
| exon-exon | CD74 | 5 | - | TUT7 | 9 | - |
| exon-intron | CD79B | 17 | - | GH-LCR | 17 | - |
| exon-exon | CD80 | 3 | - | TIMMDC1 | 3 | - |
| exon-exon | CD80 | 3 | - | TIMMDC1 | 3 | - |
| exon-intron | CD81 | 11 | + | AUTS2 | 7 | - |
| exon-intron | CD81 | 11 | + | LINC02699 | 11 | + |
| exon-intron | CD82 | 11 | - | SEC14L1 | 17 | - |
| exon-exon | CD9 | 12 | + | NOTCH2NLB | 1 | - |
| exon-intron | CD99 | Y | - | PTPRG | 3 | + |
| exon-intron | CD99 | Y | - | PTPRG | 3 | + |
| exon-intron | CD99 | Y | - | PTPRG | 3 | + |
| exon-exon | CD99L2 | X | - | STK10 | 5 | - |
| exon-exon | CD99L2 | X | - | PACRGL | 4 | + |
| exon-exon | CDC25B | 20 | - | CDC25B | 20 | + |
| intron-exon | CDC25C | 5 | + | LOC100128966 | 5 | + |
| intron-exon | CDC26 | 9 | - | MAP4K3-DT | 2 | - |
| exon-intron | CDC26 | 9 | - | THSD4 | 15 | - |
| exon-intron | CDC26 | 9 | - | LOC107987119 | 9 | - |
| exon-exon | CDC26 | 9 | - | LOC107987119 | 9 | - |
| exon-exon | CDC26P1 | 7 | - | YME1L1 | 10 | - |
| intron-exon | CDC40 | 6 | - | WASF1 | 6 | - |
| intron-exon | CDC42-AS1 | 1 | + | CDC42P6 | 4 | - |
| intron-exon | CDC42BPB | 14 | + | LLGL1 | 17 | + |
| exon-intron | CDC42P6 | 4 | - | GBA3 | 4 | - |
| exon-intron | CDC42P6 | 4 | - | GBA3 | 4 | - |
| exon-intron | CDC42P6 | 4 | - | GBA3 | 4 | - |
| intron-exon | CDC42SE1 | 1 | + | MLLT11 | 1 | + |
| exon-exon | CDC42SE1 | 1 | - | CDC42SE1 | 1 | + |
| exon-intron | CDC6 | 17 | + | MIR31HG | 9 | - |
| exon-exon | CDCA4 | 14 | - | CLBA1 | 14 | - |
| intron-exon | CDH12 | 5 | - | HSPD1 | 2 | - |
| exon-intron | CDH17 | 8 | - | IL15 | 4 | - |
| exon-intron | CDH17 | 8 | - | IL15 | 4 | - |
| exon-intron | CDH5 | 16 | - | EML1 | 14 | + |
| intron-exon | CDIN1 | 15 | + | CSNK1A1 | 5 | + |
| exon-exon | CDK11A | 1 | + | SLC35E2A | 1 | + |
| exon-intron | CDK16 | X | + | USP11 | X | + |
| intron-exon | CDK19 | 6 | + | AMD1P2 | Y | - |
| exon-exon | CDK2 | 12 | - | PMEL | 12 | - |
| exon-intron | CDK2AP1 | 12 | - | C12orf65 | 12 | - |
| exon-exon | CDK4 | 12 | - | TSPAN31 | 12 | - |
| exon-exon | CDK4 | 12 | - | TSPAN31 | 12 | - |
| exon-exon | CDK4 | 12 | - | TSPAN31 | 12 | - |
| exon-exon | CDK4 | 12 | - | TSPAN31 | 12 | - |
| exon-exon | CDK4 | 12 | - | DNASE1 | 16 | - |
| intron-exon | CDK5 | 7 | + | SLC4A2 | 7 | + |
| intron-exon | CDK6 | 7 | - | SKIV2L | 6 | + |
| intron-exon | CDKAL1 | 6 | - | RN7SL128P | 6 | - |
| exon-intron | CDKL1 | 14 | - | TNS3 | 7 | + |
| exon-exon | CDKL3 | 5 | + | UBE2B | 5 | + |
| exon-exon | CDKL3 | 5 | + | UBE2B | 5 | + |
| exon-exon | CDKL3 | 5 | + | UBE2B | 5 | + |
| exon-intron | CDKN1B | 12 | - | GPR19 | 12 | - |
| exon-intron | CDKN2AIPNL | 5 | - | CDKL3 | 5 | - |
| exon-intron | CDPF1 | 22 | + | YPEL2 | 17 | - |
| exon-exon | CDR1 | X | + | RPS15A | 16 | - |
| intron-exon | CDR1 | X | + | LINC00632 | X | + |
| exon-intron | CDSN | 6 | - | PSORS1C1 | 6 | - |
| exon-intron | CDT1 | 16 | + | RBFOX1 | 16 | + |
| exon-exon | CDT1 | 16 | - | NANOG | 12 | - |
| exon-intron | CDT1 | 16 | - | NANOGP1 | 12 | + |
| exon-exon | CEACAM5 | 19 | + | CEACAM6 | 19 | + |
| exon-exon | CEACAM5 | 19 | + | CEACAM6 | 19 | + |
| exon-exon | CEACAM5 | 19 | - | LOC112268252 | 19 | - |
| exon-exon | CEACAM5 | 19 | - | SUDS3 | 12 | - |
| exon-exon | CEBPA-DT | 19 | - | CEBPA | 19 | - |
| intron-exon | CEBPZ | 2 | - | CEBPZOS | 2 | - |
| intron-exon | CEBPZ | 2 | - | CEBPZOS | 2 | - |
| intron-exon | CEBPZ | 2 | - | CEBPZOS | 2 | - |
| intron-exon | CEBPZ | 2 | - | CEBPZOS | 2 | - |
| exon-intron | CEBPZ | 2 | - | CEBPZOS | 2 | - |
| exon-intron | CEBPZ | 2 | - | CEBPZOS | 2 | - |
| intron-exon | CEBPZ | 2 | - | CEBPZOS | 2 | - |
| exon-intron | CEBPZ | 2 | - | CEBPZOS | 2 | - |
| exon-intron | CECR7 | 22 | + | AC006946.2 | 22 | + |
| exon-exon | CELA3B | 1 | + | CELA3A | 1 | + |
| exon-intron | CELA3B | 1 | + | AF131217.1 | 21 | - |
| intron-exon | CELF2-AS1 | 10 | - | CELF2 | 10 | - |
| exon-exon | CELF3 | 1 | - | SNX27 | 1 | - |
| exon-intron | CELF4 | 18 | + | LOC105372068 | 18 | + |
| exon-intron | CELF4 | 18 | + | LOC105372068 | 18 | + |
| intron-exon | CELF4 | 18 | + | LOC105372068 | 18 | + |
| intron-exon | CELF6 | 15 | - | EWSR1 | 22 | - |
| intron-exon | CELF6 | 15 | - | TASOR2 | 10 | + |
| intron-exon | CELF6 | 15 | - | FAM104A | 17 | + |
| exon-intron | CELSR2 | 1 | + | LOC110121285 | 1 | + |
| exon-exon | CELSR3 | 3 | + | DEXI | 16 | + |
| exon-exon | CEMIP2 | 9 | + | CEMIP2 | 9 | - |
| exon-intron | CENPBD1P1 | 19 | + | DDI2 | 1 | + |
| exon-intron | CENPJ | 13 | - | RNF17 | 13 | - |
| exon-exon | CENPN | 16 | + | LOC107984858 | 16 | + |
| exon-exon | CENPN | 16 | - | CMC2 | 16 | - |
| exon-exon | CENPO | 2 | + | ADCY3 | 2 | + |
| exon-intron | CENPO | 2 | - | PTRHD1 | 2 | - |
| intron-exon | CENPP | 9 | + | OGN | 9 | - |
| exon-exon | CENPS | 1 | + | CORT | 1 | + |
| exon-exon | CENPS | 1 | + | CORT | 1 | + |
| exon-exon | CENPS | 1 | + | CORT | 1 | + |
| exon-exon | CENPS-CORT | 1 | - | CENPS-CORT | 1 | - |
| intron-exon | CENPT | 16 | - | TSNAXIP1 | 16 | - |
| exon-exon | CENPU | 4 | - | PRIMPOL | 4 | - |
| exon-exon | CENPU | 4 | - | PRIMPOL | 4 | - |
| exon-exon | CENPU | 4 | - | PRIMPOL | 4 | - |
| intron-exon | CENPV | 17 | - | PIGL | 17 | - |
| intron-exon | CENPV | 17 | - | PIGL | 17 | - |
| exon-exon | CEP112 | 17 | - | AXIN2 | 17 | - |
| exon-intron | CEP135 | 4 | - | LOC105377663 | 4 | - |
| exon-intron | CEP135 | 4 | - | LOC105377663 | 4 | - |
| intron-exon | CEP135 | 4 | - | LOC105377663 | 4 | - |
| intron-exon | CEP135 | 4 | - | LOC105377663 | 4 | - |
| exon-intron | CEP162 | 6 | - | MRAP2 | 6 | - |
| exon-intron | CEP162 | 6 | - | MRAP2 | 6 | - |
| exon-exon | CEP170 | 1 | + | SDCCAG8 | 1 | + |
| intron-exon | CEP44 | 4 | - | FBXO8 | 4 | - |
| intron-exon | CEP68 | 2 | + | RAB1A | 2 | + |
| exon-intron | CEP68 | 2 | + | SEC11C | 18 | - |
| exon-intron | CEP76 | 18 | - | PSMG2 | 18 | - |
| intron-exon | CEP85L | 6 | + | PLN | 6 | + |
| intron-exon | CEP85L | 6 | + | LOC107986524 | 6 | + |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| exon-intron | CEP95 | 17 | - | DDX5 | 17 | - |
| intron-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| intron-exon | CEP95 | 17 | - | DDX5 | 17 | - |
| intron-exon | CEPT1 | 1 | - | DRAM2 | 1 | - |
| exon-exon | CERS1 | 19 | + | GDF1 | 19 | + |
| exon-exon | CERS1 | 19 | + | GDF1 | 19 | + |
| exon-exon | CERS1 | 19 | + | GDF1 | 19 | + |
| exon-exon | CERS1 | 19 | - | GDF1 | 19 | - |
| exon-exon | CERS1 | 19 | - | GDF1 | 19 | - |
| exon-exon | CERS1 | 19 | - | GDF1 | 19 | - |
| exon-intron | CERS1 | 19 | - | GDF1 | 19 | - |
| exon-exon | CERS1 | 19 | - | GDF1 | 19 | - |
| intron-exon | CERS3 | 15 | - | CERS3-AS1 | 15 | - |
| exon-exon | CERS6-AS1 | 2 | - | TXNIP | 1 | - |
| exon-intron | CES2 | 16 | - | LOC105377684 | 5 | + |
| exon-intron | CES2 | 16 | - | NAE1 | 16 | - |
| intron-exon | CES5AP1 | 22 | - | KLHL11 | 17 | + |
| exon-exon | CFAP126 | 1 | - | UBQLNL | 11 | - |
| exon-exon | CFAP206 | 6 | + | SLC35A1 | 6 | + |
| intron-exon | CFAP20DC | 3 | + | NUB1 | 7 | - |
| exon-intron | CFAP20DC | 3 | + | CFAP20DC-AS1 | 3 | + |
| exon-intron | CFAP20DC | 3 | + | CFAP20DC-AS1 | 3 | + |
| exon-exon | CFAP251 | 12 | - | PSMD9 | 12 | - |
| exon-exon | CFAP251 | 12 | - | PSMD9 | 12 | - |
| exon-intron | CFAP298 | 21 | - | TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-intron | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-intron | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-intron | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298 | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP298-TCP10L | 21 | + | CFAP298-TCP10L | 21 | + |
| exon-exon | CFAP298-TCP10L | 21 | + | CFAP298-TCP10L | 21 | + |
| exon-exon | CFAP298-TCP10L | 21 | + | CFAP298-TCP10L | 21 | + |
| exon-exon | CFAP298-TCP10L | 21 | + | CFAP298-TCP10L | 21 | + |
| exon-exon | CFAP298-TCP10L | 21 | + | CFAP298-TCP10L | 21 | + |
| exon-exon | CFAP298-TCP10L | 21 | + | CFAP298-TCP10L | 21 | + |
| exon-exon | CFAP298-TCP10L | 21 | - | CFAP298-TCP10L | 21 | - |
| exon-exon | CFAP45 | 1 | - | VSIG8 | 1 | - |
| exon-exon | CFAP45 | 1 | - | VSIG8 | 1 | - |
| intron-exon | CFAP57 | 1 | + | EBNA1BP2 | 1 | + |
| intron-exon | CFAP61-AS1 | 20 | - | CFAP61 | 20 | - |
| exon-intron | CFAP65 | 2 | - | CNTNAP2 | 7 | + |
| intron-exon | CFAP70 | 10 | - | DNAJC9-AS1 | 10 | - |
| exon-exon | CFAP74 | 1 | + | CHD4 | 12 | + |
| intron-exon | CFAP92 | 3 | + | EFCC1 | 3 | + |
| exon-exon | CFAP92 | 3 | - | ACAD9 | 3 | - |
| exon-exon | CFAP92 | 3 | - | ACAD9 | 3 | - |
| exon-exon | CFAP92 | 3 | - | ACAD9 | 3 | - |
| exon-exon | CFAP92 | 3 | - | ACAD9 | 3 | - |
| exon-intron | CFAP92 | 3 | - | ACAD9 | 3 | - |
| exon-exon | CFAP92 | 3 | - | ACAD9 | 3 | - |
| exon-exon | CFAP92 | 3 | - | ACAD9 | 3 | - |
| exon-exon | CFAP92 | 3 | - | ACAD9 | 3 | - |
| exon-exon | CFAP92 | 3 | - | ACAD9 | 3 | - |
| exon-exon | CFAP92 | 3 | - | ACAD9 | 3 | - |
| exon-exon | CFAP99 | 4 | + | RNF4 | 4 | + |
| exon-intron | CFB | 6 | - | EEFSEC | 3 | - |
| exon-exon | CFDP1 | 16 | + | TMEM170A | 16 | + |
| exon-exon | CFDP1 | 16 | + | TMEM170A | 16 | + |
| intron-exon | CFH | 1 | + | TP53INP1 | 8 | - |
| exon-exon | CFH | 1 | + | CFHR1 | 1 | + |
| exon-exon | CFI | 4 | - | PLA2G12A | 4 | - |
| exon-exon | CFLAR-AS1 | 2 | - | CFLAR | 2 | - |
| intron-exon | CFLAR-AS1 | 2 | - | CFLAR | 2 | - |
| intron-exon | CFLAR-AS1 | 2 | - | CFLAR | 2 | - |
| intron-exon | CFLAR-AS1 | 2 | - | CFLAR | 2 | - |
| intron-exon | CFLAR-AS1 | 2 | - | CFLAR | 2 | - |
| intron-exon | CFLAR-AS1 | 2 | - | CFLAR | 2 | - |
| intron-exon | CFLAR-AS1 | 2 | - | CFLAR | 2 | - |
| intron-exon | CFLAR-AS1 | 2 | - | CFLAR | 2 | - |
| intron-exon | CFLAR-AS1 | 2 | - | CFLAR | 2 | - |
| intron-exon | CFLAR-AS1 | 2 | - | CFLAR | 2 | - |
| intron-exon | CFLAR-AS1 | 2 | - | CFLAR | 2 | - |
| intron-exon | CFLAR-AS1 | 2 | - | CFLAR | 2 | - |
| intron-exon | CFLAR-AS1 | 2 | - | CFLAR | 2 | - |
| intron-exon | CFLAR-AS1 | 2 | - | CFLAR | 2 | - |
| intron-exon | CFLAR-AS1 | 2 | - | IMPDH1P10 | 2 | - |
| intron-exon | CFLAR-AS1 | 2 | - | IMPDH1P10 | 2 | - |
| intron-exon | CFLAR-AS1 | 2 | - | CFLAR | 2 | - |
| intron-exon | CFLAR-AS1 | 2 | - | CFLAR | 2 | - |
| intron-exon | CFLAR-AS1 | 2 | - | CFLAR | 2 | - |
| intron-exon | CFLAR-AS1 | 2 | - | CFLAR | 2 | - |
| intron-exon | CFLAR-AS1 | 2 | - | CFLAR | 2 | - |
| intron-exon | CFLAR-AS1 | 2 | - | CFLAR | 2 | - |
| intron-exon | CFLAR-AS1 | 2 | - | CFLAR | 2 | - |
| intron-exon | CFLAR-AS1 | 2 | - | CFLAR | 2 | - |
| intron-exon | CFLAR-AS1 | 2 | - | CFLAR | 2 | - |
| exon-exon | CFLAR-AS1 | 2 | - | CFLAR | 2 | - |
| exon-exon | CFLAR-AS1 | 2 | - | CFLAR | 2 | - |
| exon-exon | CFLAR-AS1 | 2 | - | CFLAR | 2 | - |
| exon-exon | CFLAR-AS1 | 2 | - | CFLAR | 2 | - |
| exon-exon | CFLAR-AS1 | 2 | - | CFLAR | 2 | - |
| intron-exon | CFLAR-AS1 | 2 | - | CFLAR | 2 | - |
| exon-exon | CFTR | 7 | + | LOC105375469 | 7 | + |
| intron-exon | CFTR-AS1 | 7 | - | CFTR | 7 | - |
| exon-intron | CGAS | 6 | - | DDX43 | 6 | - |
| exon-exon | CGB5 | 19 | + | CGB1 | 19 | - |
| exon-exon | CGREF1 | 2 | - | KHK | 2 | - |
| exon-exon | CGREF1 | 2 | - | KHK | 2 | - |
| exon-exon | CGREF1 | 2 | - | KHK | 2 | - |
| exon-exon | CGREF1 | 2 | - | KHK | 2 | - |
| exon-exon | CGREF1 | 2 | - | KHK | 2 | - |
| exon-exon | CGREF1 | 2 | - | KHK | 2 | - |
| exon-exon | CGREF1 | 2 | - | KHK | 2 | - |
| exon-exon | CGREF1 | 2 | - | KHK | 2 | - |
| exon-exon | CGREF1 | 2 | - | KHK | 2 | - |
| exon-exon | CGREF1 | 2 | - | KHK | 2 | - |
| exon-exon | CGREF1 | 2 | - | KHK | 2 | - |
| exon-exon | CGREF1 | 2 | - | KHK | 2 | - |
| exon-exon | CGREF1 | 2 | - | KHK | 2 | - |
| exon-intron | CH17-340M24.3 | X | + | HNRNPM | 19 | - |
| intron-exon | CHADL | 22 | - | L3MBTL2 | 22 | - |
| intron-exon | CHADL | 22 | - | L3MBTL2 | 22 | - |
| intron-exon | CHADL | 22 | - | L3MBTL2 | 22 | - |
| intron-exon | CHADL | 22 | - | L3MBTL2 | 22 | - |
| exon-intron | CHAMP1 | 13 | - | TBC1D10C | 11 | - |
| exon-intron | CHCHD2 | 7 | - | ASXL3 | 18 | - |
| exon-intron | CHCHD2 | 7 | - | BBOF1 | 14 | - |
| intron-exon | CHCHD3 | 7 | + | TTC8 | 14 | - |
| intron-exon | CHCHD3 | 7 | + | TTC8 | 14 | - |
| exon-intron | CHCHD5 | 2 | + | AC012442.2 | 2 | + |
| intron-exon | CHD3 | 17 | + | GAPDH | 12 | + |
| exon-intron | CHD4 | 12 | + | LOC112163626 | 12 | + |
| exon-intron | CHD4 | 12 | + | LOC112163626 | 12 | + |
| exon-intron | CHD4 | 12 | + | LOC112163626 | 12 | + |
| exon-intron | CHD4 | 12 | + | LOC112163626 | 12 | + |
| exon-exon | CHD8 | 14 | - | HNRNPC | 14 | - |
| exon-intron | CHFR | 12 | - | ZNF511 | 10 | + |
| intron-exon | CHFR | 12 | - | GOLGA3 | 12 | - |
| exon-exon | CHKB | 22 | - | CPT1B | 22 | - |
| exon-exon | CHKB | 22 | - | CPT1B | 22 | - |
| exon-exon | CHKB | 22 | - | CPT1B | 22 | - |
| exon-exon | CHKB | 22 | - | CPT1B | 22 | - |
| exon-exon | CHKB | 22 | - | CPT1B | 22 | - |
| exon-exon | CHKB | 22 | - | CPT1B | 22 | - |
| intron-exon | CHKB | 22 | - | CPT1B | 22 | - |
| intron-exon | CHKB | 22 | - | CPT1B | 22 | - |
| exon-exon | CHKB-CPT1B | 22 | + | CHKB-CPT1B | 22 | + |
| intron-exon | CHKB-DT | 22 | - | MPND | 19 | - |
| exon-exon | CHL1-AS2 | 3 | + | CHL1 | 3 | + |
| exon-intron | CHMP4A | 14 | + | LOC112267850 | 14 | + |
| exon-intron | CHMP4A | 14 | + | NEDD8-MDP1 | 14 | + |
| exon-exon | CHMP4C | 8 | - | ZFAND1 | 8 | - |
| intron-exon | CHMP4C | 8 | - | ZFAND1 | 8 | - |
| intron-exon | CHMP4C | 8 | - | ZFAND1 | 8 | - |
| intron-exon | CHMP4C | 8 | - | ZFAND1 | 8 | - |
| exon-intron | CHMP4C | 8 | - | FABP12 | 8 | - |
| exon-exon | CHN1 | 2 | + | ATF2 | 2 | + |
| exon-exon | CHODL | 21 | - | C21orf91 | 21 | - |
| exon-exon | CHODL | 21 | - | C21orf91 | 21 | - |
| exon-exon | CHODL | 21 | - | C21orf91 | 21 | - |
| exon-intron | CHP1 | 15 | + | AL158175.1 | 20 | + |
| exon-intron | CHRM3-AS2 | 1 | - | CHRM3 | 1 | - |
| exon-exon | CHRNA10 | 11 | + | NUP98 | 11 | + |
| exon-intron | CHRNA7 | 15 | + | LOC102724078 | 15 | + |
| exon-intron | CHRNB2 | 1 | - | SEC1P | 19 | + |
| intron-exon | CHRNB4 | 15 | + | LOC112268142 | 15 | + |
| intron-exon | CHRNE | 17 | + | C17orf107 | 17 | + |
| exon-exon | CHRNE | 17 | - | MINK1 | 17 | - |
| exon-exon | CHRNE | 17 | - | MINK1 | 17 | - |
| exon-exon | CHRNE | 17 | - | MINK1 | 17 | - |
| exon-exon | CHST2 | 3 | - | CLN6 | 15 | + |
| exon-exon | CHST5 | 16 | + | TMEM231 | 16 | + |
| exon-intron | CHSY1 | 15 | - | INTS9 | 8 | + |
| exon-exon | CHTOP | 1 | - | S100A13 | 1 | - |
| exon-exon | CHURC1 | 14 | + | FNTB | 14 | + |
| exon-exon | CHURC1 | 14 | + | FNTB | 14 | + |
| exon-exon | CHURC1 | 14 | + | FNTB | 14 | + |
| exon-exon | CHURC1-FNTB | 14 | + | CHURC1-FNTB | 14 | + |
| exon-exon | CHURC1-FNTB | 14 | + | CHURC1-FNTB | 14 | + |
| intron-exon | CHURC1-FNTB | 14 | + | LOC100506321 | 14 | + |
| exon-exon | CHURC1-FNTB | 14 | + | CHURC1-FNTB | 14 | + |
| exon-intron | CIAO1 | 2 | - | ITPR1 | 3 | - |
| exon-exon | CIAO2A | 15 | + | MRPL52 | 14 | + |
| exon-intron | CIAO2A | 15 | - | CUX1 | 7 | - |
| intron-exon | CIB1 | 15 | + | GDPGP1 | 15 | + |
| exon-intron | CIB2 | 15 | + | IDH3A | 15 | + |
| intron-exon | CICP19 | 19 | - | SEPTIN14P14 | 1 | - |
| intron-exon | CICP19 | 19 | - | SEPTIN14P5 | 5 | + |
| intron-exon | CICP19 | 19 | - | SEPTIN14P13 | 1 | - |
| intron-exon | CICP3 | 1 | - | SEPTIN14P5 | 5 | + |
| intron-exon | CICP7 | 1 | - | SEPTIN14P5 | 5 | + |
| exon-intron | CIITA | 16 | + | CLEC16A | 16 | + |
| exon-intron | CIITA | 16 | - | TRIM2 | 4 | + |
| intron-exon | CILK1 | 6 | + | FBXO9 | 6 | + |
| exon-exon | CIPC | 14 | + | TMEM63C | 14 | + |
| exon-intron | CIPC | 14 | + | TMEM63C | 14 | + |
| exon-exon | CISD2 | 4 | + | SLC9B1P3 | 10 | + |
| exon-exon | CISH | 3 | + | MAPKAPK3 | 3 | + |
| exon-intron | CKAP4 | 12 | - | POM121C | 7 | + |
| exon-exon | CKB | 14 | - | CKB | 14 | + |
| exon-exon | CKLF | 16 | + | CMTM1 | 16 | + |
| exon-exon | CKLF | 16 | + | CMTM1 | 16 | + |
| exon-intron | CKLF | 16 | + | CKLF-CMTM1 | 16 | + |
| exon-exon | CKLF | 16 | + | CMTM1 | 16 | + |
| exon-exon | CKLF | 16 | + | CMTM1 | 16 | + |
| exon-intron | CKLF | 16 | - | TK2 | 16 | - |
| exon-intron | CKMT1A | 15 | + | STRCP1 | 15 | + |
| exon-exon | CKMT1A | 15 | - | CKMT1B | 15 | - |
| exon-exon | CKMT1B | 15 | + | STRC | 15 | + |
| exon-exon | CKS1B | 1 | + | CKS1BP2 | 10 | + |
| intron-exon | CLASP2 | 3 | - | AIMP2 | 7 | + |
| intron-exon | CLCA4-AS1 | 1 | + | CLCA3P | 1 | + |
| exon-exon | CLCC1 | 1 | - | AKNAD1 | 1 | - |
| exon-intron | CLCF1 | 11 | - | LOC100130987 | 11 | - |
| exon-exon | CLCN2 | 3 | - | CIAO1 | 2 | + |
| exon-intron | CLDN10 | 13 | + | DZIP1 | 13 | + |
| exon-intron | CLDN10 | 13 | + | DZIP1 | 13 | + |
| exon-exon | CLDN11 | 3 | + | SLC7A14 | 3 | + |
| exon-exon | CLDN11 | 3 | + | SLC7A14-AS1 | 3 | + |
| exon-exon | CLDN12 | 7 | + | LOC102723899 | 7 | + |
| exon-exon | CLDN12 | 7 | + | LOC102723899 | 7 | + |
| exon-exon | CLDN12 | 7 | + | LOC102723899 | 7 | + |
| exon-exon | CLDND1 | 3 | - | OR5K2 | 3 | - |
| exon-exon | CLDND2 | 19 | - | ETFB | 19 | - |
| exon-intron | CLDND2 | 19 | - | ETFB | 19 | - |
| exon-exon | CLEC3A | 16 | + | LOC107984897 | 16 | + |
| exon-exon | CLEC3B | 3 | - | EXOSC7 | 3 | - |
| exon-exon | CLEC4A | 12 | + | ZNF705A | 12 | + |
| intron-exon | CLEC5A | 7 | + | MGAM | 7 | + |
| intron-exon | CLIC1 | 6 | - | DDAH2 | 6 | - |
| intron-exon | CLIC1 | 6 | - | DDAH2 | 6 | - |
| exon-intron | CLIC4 | 1 | + | LINC01239 | 9 | + |
| exon-exon | CLK1 | 2 | - | CLK4 | 5 | - |
| exon-intron | CLK3 | 15 | + | EDC3 | 15 | + |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-intron | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-intron | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-intron | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-intron | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-intron | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-intron | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-intron | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-intron | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-intron | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-intron | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-intron | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-intron | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-intron | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-intron | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-intron | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-intron | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-intron | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-intron | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-intron | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-intron | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-intron | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-exon | CLMAT3 | 5 | - | SPARC | 5 | - |
| exon-intron | CLN6 | 15 | - | LINC02558 | 22 | + |
| exon-intron | CLN6 | 15 | - | TENM4 | 11 | - |
| intron-exon | CLNS1A | 11 | - | LOC646029 | 11 | - |
| exon-intron | CLPTM1 | 19 | + | HNRNPM | 19 | - |
| intron-exon | CLRN1-AS1 | 3 | + | LOC107986144 | 3 | + |
| exon-exon | CLSTN1 | 1 | + | CLSTN1 | 1 | - |
| exon-intron | CLTA | 9 | + | LOC102724322 | 9 | + |
| exon-intron | CLTC | 17 | - | AC091271.1 | 17 | - |
| intron-exon | CLTRN | X | + | ARHGEF16 | 1 | + |
| exon-exon | CLU | 8 | + | ZBTB18 | 1 | - |
| exon-exon | CLU | 8 | + | RNA45SN3 | 21 | + |
| exon-exon | CLUL1 | 18 | + | TYMS | 18 | + |
| exon-intron | CMBL | 5 | + | MICOS10 | 1 | - |
| intron-exon | CMC1 | 3 | + | AZI2 | 3 | + |
| exon-exon | CMC2 | 16 | + | CENPN | 16 | + |
| exon-exon | CMC4 | X | + | MTCP1 | X | + |
| exon-intron | CMPK1 | 1 | + | LINC01684 | 21 | - |
| exon-intron | CMPK1 | 1 | - | MYO10 | 5 | - |
| exon-exon | CMTM1 | 16 | - | CKLF | 16 | - |
| exon-exon | CMTM1 | 16 | - | CKLF | 16 | - |
| exon-exon | CMTM1 | 16 | - | CKLF | 16 | - |
| exon-exon | CMTM1 | 16 | - | CKLF | 16 | - |
| exon-exon | CMTM1 | 16 | - | CKLF | 16 | - |
| intron-exon | CMTM8 | 3 | - | PPP4R2 | 3 | - |
| exon-exon | CNBD1 | 8 | + | LOC105375626 | 8 | + |
| exon-intron | CNBP | 3 | - | AFG1L | 6 | + |
| intron-exon | CNIH3 | 1 | - | WDR26 | 1 | - |
| intron-exon | CNIH3 | 1 | - | WDR26 | 1 | - |
| exon-exon | CNKSR3 | 6 | + | CNKSR3 | 6 | - |
| intron-exon | CNKSR3 | 6 | - | IPCEF1 | 6 | - |
| exon-exon | CNKSR3 | 6 | - | IPCEF1 | 6 | - |
| exon-intron | CNN2 | 19 | - | WDR70 | 5 | + |
| exon-exon | CNNM3 | 2 | + | CNNM3 | 2 | - |
| exon-intron | CNOT10 | 3 | - | GALNT11 | 7 | + |
| exon-exon | CNP | 17 | + | DNAJC7 | 17 | + |
| intron-exon | CNPPD1 | 2 | + | RETREG2 | 2 | + |
| intron-exon | CNPPD1 | 2 | + | RETREG2 | 2 | + |
| exon-intron | CNPY2 | 12 | - | RNF41 | 12 | - |
| exon-intron | CNPY2 | 12 | - | RNF41 | 12 | - |
| exon-intron | CNPY2 | 12 | - | AC073896.1 | 12 | - |
| exon-exon | CNPY2 | 12 | - | CS | 12 | - |
| exon-exon | CNPY2 | 12 | - | CS | 12 | - |
| exon-exon | CNPY3 | 6 | + | CNPY3-GNMT | 6 | + |
| exon-exon | CNPY3 | 6 | + | CNPY3-GNMT | 6 | + |
| exon-exon | CNPY3 | 6 | + | CNPY3-GNMT | 6 | + |
| exon-exon | CNPY3 | 6 | + | CNPY3-GNMT | 6 | + |
| intron-exon | CNPY3 | 6 | - | LOC105378179 | 14 | - |
| exon-exon | CNPY3-GNMT | 6 | - | CNPY3-GNMT | 6 | - |
| exon-exon | CNPY3-GNMT | 6 | - | CNPY3-GNMT | 6 | - |
| intron-exon | CNPY3-GNMT | 6 | - | RPL7L1 | 6 | - |
| exon-exon | CNPY3-GNMT | 6 | - | CNPY3-GNMT | 6 | - |
| exon-intron | CNTD1 | 17 | + | INSR | 19 | + |
| exon-intron | CNTFR | 9 | + | CNTFR-AS1 | 9 | + |
| intron-exon | CNTN4-AS1 | 3 | - | CNTN4 | 3 | - |
| exon-intron | COA1 | 7 | + | LOC107984832 | 16 | + |
| intron-exon | COA1 | 7 | - | STK17A | 7 | - |
| intron-exon | COA1 | 7 | - | CNN2 | 19 | + |
| exon-exon | COA1 | 7 | - | PKM | 15 | - |
| exon-exon | COA3 | 17 | - | WNK4 | 17 | - |
| exon-intron | COA6-AS1 | 1 | + | COA6 | 1 | + |
| exon-intron | COASY | 17 | - | HSD17B1 | 17 | - |
| exon-exon | COASY | 17 | - | COASY | 17 | + |
| exon-exon | COCH | 14 | + | STRN3 | 14 | + |
| exon-exon | COG1 | 17 | + | FAM104A | 17 | + |
| intron-exon | COG1 | 17 | + | FAM104A | 17 | + |
| intron-exon | COG4 | 16 | - | LPIN2 | 18 | - |
| intron-exon | COG5 | 7 | + | GPR22 | 7 | + |
| intron-exon | COG5 | 7 | + | DUS4L-BCAP29 | 7 | + |
| exon-exon | COG5 | 7 | - | HBP1 | 7 | - |
| intron-exon | COG6 | 13 | + | FRK | 6 | - |
| exon-exon | COG8 | 16 | + | TMED6 | 16 | + |
| exon-exon | COG8 | 16 | + | TMED6 | 16 | + |
| exon-exon | COG8 | 16 | + | TMED6 | 16 | + |
| intron-exon | COL14A1 | 8 | - | LINC00672 | 17 | - |
| exon-exon | COL19A1 | 6 | - | LMBRD1 | 6 | - |
| exon-exon | COL19A1 | 6 | - | LMBRD1 | 6 | - |
| exon-intron | COL1A1 | 17 | + | MARCHF6 | 5 | - |
| exon-exon | COL1A1 | 17 | + | GRAP2 | 22 | - |
| exon-intron | COL1A1 | 17 | + | LOC101929950 | 17 | - |
| exon-exon | COL1A1 | 17 | + | COL1A1 | 17 | - |
| exon-intron | COL1A1 | 17 | + | HSD17B12 | 11 | + |
| exon-exon | COL1A1 | 17 | + | COL1A1 | 17 | - |
| exon-intron | COL1A1 | 17 | - | CAMKK1 | 17 | - |
| exon-exon | COL1A1 | 17 | - | PDGFB | 22 | - |
| exon-exon | COL1A2 | 7 | + | SACS | 13 | - |
| exon-intron | COL1A2 | 7 | + | FCHSD2 | 11 | - |
| exon-exon | COL1A2 | 7 | + | COL1A2 | 7 | - |
| exon-exon | COL1A2 | 7 | - | COL1A1 | 17 | + |
| exon-exon | COL1A2 | 7 | - | PARVA | 11 | - |
| exon-exon | COL1A2 | 7 | - | COL1A2 | 7 | + |
| intron-exon | COL24A1 | 1 | - | ZNHIT6 | 1 | - |
| exon-exon | COL2A1 | 12 | + | CLIC4 | 1 | - |
| exon-intron | COL3A1 | 2 | + | MYO10 | 5 | - |
| exon-exon | COL4A1 | 13 | + | COL4A2 | 13 | + |
| exon-exon | COL4A2 | 13 | + | STK24 | 13 | - |
| intron-exon | COL4A4 | 2 | - | RHBDD1 | 2 | - |
| exon-exon | COL5A1 | 9 | + | RNA45SN1 | 21 | + |
| exon-intron | COL6A1 | 21 | - | GOLGA2P11 | 15 | - |
| exon-exon | COL6A3 | 2 | + | POSTN | 13 | - |
| exon-exon | COL6A3 | 2 | + | POSTN | 13 | - |
| intron-exon | COL7A1 | 3 | - | UCN2 | 3 | - |
| exon-exon | COL8A1 | 3 | - | TNS1 | 2 | - |
| exon-exon | COL8A2 | 1 | - | FHAD1 | 1 | + |
| exon-exon | COLCA1 | 11 | + | COLCA2 | 11 | + |
| exon-exon | COLCA1 | 11 | + | COLCA2 | 11 | + |
| exon-exon | COLCA1 | 11 | + | COLCA2 | 11 | + |
| intron-exon | COLEC11 | 2 | + | CSF1 | 1 | - |
| exon-exon | COLEC12 | 18 | + | COLEC12 | 18 | - |
| exon-exon | COMMD1 | 2 | - | CCT4 | 2 | - |
| exon-exon | COMMD3 | 10 | + | BMI1 | 10 | + |
| exon-exon | COMMD3 | 10 | + | BMI1 | 10 | + |
| exon-exon | COMMD3 | 10 | + | BMI1 | 10 | + |
| exon-exon | COMMD3 | 10 | + | BMI1 | 10 | + |
| intron-exon | COMT | 22 | - | TXNRD2 | 22 | - |
| exon-exon | COMT | 22 | - | TXNRD2 | 22 | - |
| exon-exon | COMT | 22 | - | TXNRD2 | 22 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-intron | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-exon | COPB2 | 3 | - | MRPS22 | 3 | - |
| exon-intron | COPG1 | 3 | + | TTLL1-AS1 | 22 | + |
| exon-exon | COPG1 | 3 | - | CPM | 12 | - |
| exon-exon | COPG1 | 3 | - | HOXC9 | 12 | + |
| exon-exon | COPG2 | 7 | - | MEST | 7 | - |
| exon-intron | COPS4 | 4 | + | LOC112997538 | 4 | + |
| exon-intron | COPS5 | 8 | - | PPP1R42 | 8 | - |
| exon-intron | COPS8 | 2 | - | AC012063.1 | 2 | - |
| exon-intron | COPS8 | 2 | - | TAFA1 | 3 | - |
| exon-exon | COQ4 | 9 | - | TRUB2 | 9 | - |
| intron-exon | COQ5 | 12 | + | RNF10 | 12 | + |
| exon-exon | COQ6 | 14 | - | FAM161B | 14 | - |
| exon-exon | COQ6 | 14 | - | FAM161B | 14 | - |
| exon-exon | COQ6 | 14 | - | FAM161B | 14 | - |
| exon-exon | COQ6 | 14 | - | FAM161B | 14 | - |
| exon-exon | CORO6 | 17 | - | ANKRD13B | 17 | - |
| exon-exon | CORO6 | 17 | - | ANKRD13B | 17 | - |
| exon-exon | CORO7 | 16 | - | PAM16 | 16 | - |
| exon-intron | CORO7 | 16 | - | CORO7-PAM16 | 16 | - |
| exon-exon | CORO7 | 16 | - | CORO7-PAM16 | 16 | - |
| exon-exon | CORO7-PAM16 | 16 | + | CORO7-PAM16 | 16 | + |
| intron-exon | CORO7-PAM16 | 16 | + | VASN | 16 | + |
| exon-exon | CORT | 1 | - | CENPS | 1 | - |
| exon-intron | CORT | 1 | - | CENPS | 1 | - |
| exon-exon | CORT | 1 | - | CENPS | 1 | - |
| exon-exon | CORT | 1 | - | CENPS | 1 | - |
| exon-exon | CORT | 1 | - | CENPS | 1 | - |
| exon-exon | CORT | 1 | - | CENPS | 1 | - |
| exon-exon | CORT | 1 | - | CENPS | 1 | - |
| exon-exon | CORT | 1 | - | CENPS | 1 | - |
| exon-exon | CORT | 1 | - | CENPS | 1 | - |
| exon-exon | CORT | 1 | - | CENPS | 1 | - |
| exon-exon | CORT | 1 | - | CENPS | 1 | - |
| exon-exon | CORT | 1 | - | CENPS | 1 | - |
| exon-exon | CORT | 1 | - | CENPS | 1 | - |
| exon-exon | CORT | 1 | - | CENPS | 1 | - |
| exon-exon | COX1 | MT | + | ND5 | MT | + |
| exon-exon | COX1 | MT | + | ND5 | MT | + |
| exon-intron | COX1 | MT | + | TRNS1 | MT | + |
| exon-exon | COX1 | MT | + | ND5 | MT | + |
| exon-intron | COX1 | MT | + | TRNS1 | MT | + |
| exon-intron | COX1 | MT | + | TRNS1 | MT | + |
| exon-intron | COX1 | MT | + | TRNS1 | MT | + |
| exon-intron | COX1 | MT | + | TRNS1 | MT | + |
| intron-exon | COX1 | MT | + | COX1 | MT | - |
| exon-intron | COX1 | MT | - | TRNC | MT | - |
| exon-exon | COX1 | MT | - | RAB11A | 15 | + |
| exon-exon | COX1 | MT | - | PCDH1 | 5 | - |
| exon-exon | COX1 | MT | - | AXL | 19 | - |
| exon-exon | COX1 | MT | - | MUC5AC | 11 | - |
| exon-intron | COX1 | MT | - | SPON1-AS1 | 11 | + |
| exon-exon | COX1 | MT | - | DSG3 | 18 | - |
| exon-intron | COX1 | MT | - | CCDC144B | 17 | - |
| exon-exon | COX1 | MT | - | ZDHHC3 | 3 | - |
| exon-intron | COX1 | MT | - | COX3 | MT | + |
| exon-intron | COX1 | MT | - | MTCO1P12 | 1 | + |
| intron-exon | COX10-AS1 | 17 | - | HNRNPU | 1 | + |
| intron-exon | COX15 | 10 | + | CUTC | 10 | + |
| exon-exon | COX15 | 10 | + | CUTC | 10 | + |
| exon-intron | COX17 | 3 | - | LOC105374063 | 3 | - |
| exon-intron | COX17 | 3 | - | LOC105374063 | 3 | - |
| exon-intron | COX17 | 3 | - | LOC105374063 | 3 | - |
| exon-intron | COX17 | 3 | - | LOC105374063 | 3 | - |
| exon-intron | COX17 | 3 | - | LOC105374063 | 3 | - |
| exon-intron | COX17 | 3 | - | LOC105374063 | 3 | - |
| exon-intron | COX17 | 3 | - | LOC105374063 | 3 | - |
| exon-intron | COX17 | 3 | - | LOC105374063 | 3 | - |
| exon-exon | COX19 | 7 | - | ADAP1 | 7 | - |
| exon-exon | COX2 | MT | + | ND5 | MT | + |
| exon-exon | COX2 | MT | + | CYTB | MT | + |
| exon-exon | COX2 | MT | + | CYTB | MT | + |
| exon-exon | COX2 | MT | + | CYTB | MT | + |
| exon-exon | COX2 | MT | + | ND5 | MT | + |
| exon-intron | COX2 | MT | + | MTCO2P12 | 1 | + |
| intron-exon | COX2 | MT | - | COX2 | MT | + |
| exon-intron | COX20 | 1 | + | TET1 | 10 | + |
| exon-exon | COX3 | MT | + | ND5 | MT | + |
| exon-intron | COX3 | MT | + | LINC01954 | 2 | + |
| exon-intron | COX3 | MT | + | AC012593.1 | 2 | + |
| exon-intron | COX3 | MT | + | WWOX | 16 | - |
| exon-exon | COX3 | MT | - | ATP6 | MT | - |
| exon-exon | COX3 | MT | - | ATP6 | MT | - |
| exon-exon | COX3 | MT | - | ATP6 | MT | - |
| exon-exon | COX3 | MT | - | CCT2 | 12 | - |
| exon-exon | COX3 | MT | - | ATP6 | MT | - |
| exon-intron | COX3 | MT | - | MTATP6P1 | 1 | - |
| exon-exon | COX3 | MT | - | ND4 | MT | - |
| exon-exon | COX3 | MT | - | PTPRK | 6 | - |
| exon-exon | COX3 | MT | - | DCAF5 | 14 | + |
| exon-intron | COX3 | MT | - | MTCO3P12 | 1 | - |
| exon-intron | COX4I1 | 16 | + | FAM189A1 | 15 | + |
| exon-exon | COX5A | 15 | - | ASCC1 | 10 | - |
| exon-intron | COX6A1P2 | 6 | + | PHKB | 16 | - |
| exon-intron | COX6B1 | 19 | + | AP000472.1 | 21 | - |
| exon-exon | COX6B1 | 19 | - | B2M | 15 | - |
| exon-intron | COX6C | 8 | - | VPS13B | 8 | - |
| exon-intron | COX6C | 8 | - | VPS13B | 8 | - |
| exon-exon | COX7A2 | 6 | - | PDGFA | 7 | + |
| exon-intron | COX7A2 | 6 | - | BAG4 | 8 | - |
| exon-intron | COX7B | X | + | NTM | 11 | - |
| exon-intron | COX7B | X | + | POLR2F | 22 | + |
| exon-intron | COX7B | X | + | SPIRE2 | 16 | - |
| exon-intron | COX7C | 5 | + | RASA4DP | 7 | - |
| exon-exon | COX7C | 5 | - | PHF3 | 6 | - |
| exon-exon | COX8A | 11 | + | OTUB1 | 11 | + |
| exon-exon | COX8A | 11 | + | OTUB1 | 11 | + |
| exon-intron | COX8A | 11 | + | GPR55 | 2 | - |
| exon-intron | COX8A | 11 | + | SORL1 | 11 | - |
| exon-intron | CPA6 | 8 | - | LOC102724708 | 8 | - |
| exon-intron | CPB2 | 13 | - | CPB2-AS1 | 13 | - |
| exon-exon | CPEB1 | 15 | - | TRAPPC2 | X | + |
| intron-exon | CPEB1-AS1 | 15 | - | CPEB1 | 15 | - |
| intron-exon | CPED1 | 7 | - | BRD3 | 9 | - |
| exon-exon | CPLANE1 | 5 | - | NIPBL | 5 | - |
| exon-exon | CPLANE1 | 5 | - | NIPBL | 5 | - |
| exon-intron | CPLANE2 | 1 | - | AL109627.1 | 1 | - |
| exon-exon | CPLX2 | 5 | + | RAB6B | 3 | - |
| intron-exon | CPN1 | 10 | - | COX15 | 10 | - |
| intron-exon | CPNE4 | 3 | + | ACP3 | 3 | + |
| intron-exon | CPNE8-AS1 | 12 | - | CPNE8 | 12 | - |
| exon-exon | CPO | 2 | - | FASTKD2 | 2 | - |
| exon-exon | CPQ | 8 | + | LOC105375655 | 8 | + |
| exon-intron | CPSF2 | 14 | + | LOC102725238 | 17 | - |
| intron-exon | CPSF2 | 14 | - | EGR1 | 5 | + |
| exon-intron | CPSF2 | 14 | - | SPATA5L1 | 15 | + |
| intron-exon | CPSF4L | 17 | - | ILF3 | 19 | - |
| exon-intron | CPSF6 | 12 | + | EPB41L5 | 2 | + |
| intron-exon | CPSF7 | 11 | + | SDHAF2 | 11 | + |
| exon-intron | CPT1A | 11 | + | NRROS | 3 | + |
| intron-exon | CR381670.2 | 21 | + | PTGER4P2-CDK2AP2P2 | 9 | - |
| intron-exon | CRACD | 4 | + | PAICS | 4 | + |
| exon-exon | CRACD | 4 | + | H19 | 11 | - |
| exon-exon | CRBN | 3 | - | TRNT1 | 3 | - |
| exon-exon | CRCP | 7 | - | ASL | 7 | - |
| exon-exon | CRCP | 7 | - | ASL | 7 | - |
| exon-exon | CRCP | 7 | - | ASL | 7 | - |
| exon-intron | CRCP | 7 | - | VKORC1L1 | 7 | - |
| exon-intron | CREG2 | 2 | + | TOMM20 | 1 | + |
| exon-exon | CRHR1 | 17 | - | LINC02210 | 17 | - |
| exon-exon | CRHR1 | 17 | - | LINC02210 | 17 | - |
| exon-exon | CRIP1 | 14 | + | TEDC1 | 14 | + |
| exon-exon | CRIP1 | 14 | + | TEDC1 | 14 | + |
| exon-intron | CRIP1 | 14 | + | AL928654.7 | 14 | + |
| exon-exon | CRIP1 | 14 | + | TEDC1 | 14 | + |
| exon-exon | CRIP3 | 6 | - | SLC22A7 | 6 | - |
| exon-intron | CRK | 17 | - | MAGT1 | X | + |
| intron-exon | CRLF1 | 19 | - | UBA52 | 19 | - |
| exon-exon | CRLF3 | 17 | - | SUZ12P1 | 17 | - |
| exon-exon | CROCC | 1 | + | CROCCP4 | 1 | + |
| exon-exon | CROCCP2 | 1 | - | CROCCP3 | 1 | - |
| intron-exon | CROCCP2 | 1 | - | CROCCP3 | 1 | - |
| exon-exon | CRTC1 | 19 | + | MAML2 | 11 | - |
| exon-exon | CRTC2 | 1 | + | SLC39A1 | 1 | + |
| intron-exon | CRTC3-AS1 | 15 | - | CRTC3 | 15 | - |
| exon-exon | CRY2 | 11 | + | CRY2 | 11 | - |
| exon-intron | CRYBB1 | 22 | + | CRYBA4 | 22 | + |
| exon-exon | CRYBG3 | 3 | + | RIOX2 | 3 | + |
| exon-intron | CRYZL2P | 1 | - | SEC16B | 1 | - |
| exon-exon | CRYZL2P | 1 | - | SEC16B | 1 | - |
| exon-exon | CRYZL2P | 1 | - | SEC16B | 1 | - |
| exon-exon | CRYZL2P-SEC16B | 1 | + | CRYZL2P-SEC16B | 1 | + |
| exon-exon | CS | 12 | + | SUPT16H | 14 | + |
| exon-exon | CSDE1 | 1 | + | SIKE1 | 1 | + |
| exon-exon | CSDE1 | 1 | + | SIKE1 | 1 | + |
| exon-exon | CSE1L | 20 | + | CSE1L | 20 | - |
| intron-exon | CSF1 | 1 | + | NPHP4 | 1 | - |
| intron-exon | CSF1R | 5 | - | HMGB2 | 4 | + |
| exon-intron | CSF2RA | Y | - | LOC102723985 | 15 | + |
| intron-exon | CSF2RA | Y | - | LIN54 | 4 | + |
| exon-exon | CSH1 | 17 | + | CSH1 | 17 | - |
| exon-exon | CSH1 | 17 | + | CSH1 | 17 | - |
| exon-exon | CSH1 | 17 | + | CSH1 | 17 | - |
| exon-exon | CSH1 | 17 | + | CSH1 | 17 | - |
| exon-exon | CSH1 | 17 | + | CSH1 | 17 | - |
| exon-exon | CSH1 | 17 | + | CSH1 | 17 | - |
| exon-exon | CSH1 | 17 | + | CSH2 | 17 | - |
| exon-exon | CSH1 | 17 | - | CSH2 | 17 | - |
| exon-exon | CSH2 | 17 | + | GH2 | 17 | + |
| exon-exon | CSH2 | 17 | + | CSH2 | 17 | - |
| exon-exon | CSHL1 | 17 | - | CSH1 | 17 | - |
| exon-exon | CSN1S2BP | 4 | + | PRR27 | 4 | + |
| exon-exon | CSNK1D | 17 | - | SLC16A3 | 17 | - |
| exon-exon | CSNK1D | 17 | - | SLC16A3 | 17 | - |
| exon-exon | CSNK1D | 17 | - | SLC16A3 | 17 | - |
| exon-exon | CSNK1D | 17 | - | SLC16A3 | 17 | - |
| exon-exon | CSNK1D | 17 | - | SLC16A3 | 17 | - |
| exon-exon | CSNK1D | 17 | - | TPT1 | 13 | + |
| exon-exon | CSNK1G1 | 15 | + | PCLAF | 15 | + |
| exon-exon | CSNK1G1 | 15 | + | PCLAF | 15 | + |
| exon-exon | CSNK2A1 | 20 | - | RNA45SN1 | 21 | - |
| exon-exon | CSNK2B | 6 | + | LY6G5B | 6 | + |
| exon-exon | CSNK2B | 6 | + | LY6G5B | 6 | + |
| exon-intron | CSNK2B | 6 | + | PRSS23 | 11 | + |
| exon-exon | CSPP1 | 8 | - | COPS5 | 8 | - |
| intron-exon | CSPP1 | 8 | - | COPS5 | 8 | - |
| intron-exon | CSPP1 | 8 | - | COPS5 | 8 | - |
| intron-exon | CSPP1 | 8 | - | COPS5 | 8 | - |
| intron-exon | CSPP1 | 8 | - | COPS5 | 8 | - |
| exon-exon | CST2 | 20 | - | CST1 | 20 | - |
| exon-exon | CST2 | 20 | - | CST1 | 20 | - |
| exon-exon | CST3 | 20 | + | VPS13D | 1 | - |
| exon-intron | CSTB | 21 | - | LOC105370251 | 13 | - |
| intron-exon | CSTF3-DT | 11 | - | CSTF3 | 11 | - |
| intron-exon | CT47A12 | X | - | CT47B1 | X | - |
| exon-intron | CTBP1 | 4 | - | CTBP1-AS | 4 | - |
| exon-intron | CTBP2 | 10 | - | ZRANB1 | 10 | - |
| exon-exon | CTBS | 1 | - | GNG5 | 1 | - |
| exon-exon | CTBS | 1 | - | GNG5 | 1 | - |
| intron-exon | CTBS | 1 | - | GNG5 | 1 | - |
| exon-exon | CTC-338M12.4 | 5 | - | RACK1 | 5 | - |
| exon-exon | CTDNEP1 | 17 | + | ELP5 | 17 | + |
| exon-intron | CTDNEP1 | 17 | - | GPC3 | X | + |
| intron-exon | CTNNA3 | 10 | + | LRRTM3 | 10 | + |
| intron-exon | CTNNAL1 | 9 | + | FRRS1L | 9 | + |
| exon-intron | CTNNAL1 | 9 | + | LOC105376216 | 9 | + |
| exon-intron | CTNNB1 | 3 | + | SREK1 | 5 | + |
| exon-exon | CTNND1 | 11 | - | TMX2-CTNND1 | 11 | - |
| exon-exon | CTNND2 | 5 | - | PKP4 | 2 | + |
| intron-exon | CTSA | 20 | + | PLTP | 20 | + |
| exon-exon | CTSB | 8 | + | FNDC1 | 6 | - |
| exon-intron | CTSB | 8 | + | LINC00894 | X | - |
| exon-intron | CTSB | 8 | - | MAP4 | 3 | + |
| exon-exon | CTSD | 11 | + | VMP1 | 17 | + |
| exon-exon | CTXN2 | 15 | + | SLC12A1 | 15 | + |
| exon-intron | CTXND2 | 1 | + | LOC107985204 | 1 | + |
| intron-exon | CUEDC2 | 10 | + | STON2 | 14 | + |
| exon-intron | CUL1 | 7 | - | AC005229.4 | 7 | - |
| exon-exon | CUL1 | 7 | - | CUL1 | 7 | + |
| exon-intron | CUL3 | 2 | - | FOXP1 | 3 | + |
| exon-exon | CUL4A | 13 | - | CUL4A | 13 | + |
| exon-exon | CUL5 | 11 | + | NT5C2 | 10 | - |
| intron-exon | CUL5 | 11 | - | SLC7A1 | 13 | + |
| exon-intron | CUTALP | 9 | + | EHD2 | 19 | + |
| exon-intron | CUTC | 10 | - | COX15 | 10 | - |
| intron-exon | CUX1 | 7 | + | PMS2P4 | 7 | - |
| exon-intron | CXCL10 | 4 | - | ART3 | 4 | - |
| exon-intron | CXCL10 | 4 | - | ART3 | 4 | - |
| exon-exon | CXCL12 | 10 | + | LINC02881 | 10 | + |
| exon-intron | CXCL14 | 5 | + | SLC25A48 | 5 | + |
| exon-intron | CXCL16 | 17 | + | MINK1 | 17 | + |
| exon-exon | CXCL16 | 17 | - | MED11 | 17 | - |
| exon-exon | CXCL16 | 17 | - | MED11 | 17 | - |
| exon-intron | CXCL17 | 19 | - | LIPE-AS1 | 19 | - |
| exon-exon | CXCL6 | 4 | + | PPBPP1 | 4 | + |
| exon-exon | CXorf65 | X | - | FOXO4 | X | + |
| exon-exon | CYB561A3 | 11 | + | TMEM138 | 11 | + |
| exon-exon | CYB561D2 | 3 | - | NPRL2 | 3 | - |
| intron-exon | CYB5A | 18 | - | DNASE1L1 | X | - |
| exon-intron | CYB5D2 | 17 | + | ANKFY1 | 17 | + |
| exon-intron | CYB5R1 | 1 | - | RNR1 | MT | - |
| exon-exon | CYB5R4 | 6 | - | RIPPLY2 | 6 | - |
| exon-exon | CYB5RL | 1 | - | CDCP2 | 1 | - |
| exon-intron | CYCS | 7 | + | GPHN | 14 | + |
| exon-exon | CYGB | 17 | + | PRCD | 17 | + |
| exon-exon | CYGB | 17 | + | PRCD | 17 | + |
| exon-intron | CYGB | 17 | + | PRCD | 17 | + |
| exon-intron | CYP11B1 | 8 | + | LOC106799833 | 8 | + |
| exon-intron | CYP17A1 | 10 | + | CYP17A1-AS1 | 10 | + |
| exon-exon | CYP17A1 | 10 | + | CYP17A1-AS1 | 10 | + |
| exon-exon | CYP17A1-AS1 | 10 | + | CYP17A1 | 10 | + |
| intron-exon | CYP19A1 | 15 | + | LOC112268146 | 15 | + |
| exon-intron | CYP21A1P | 6 | + | CYP21A2 | 6 | + |
| exon-intron | CYP21A1P | 6 | + | LOC106780803 | 6 | + |
| exon-intron | CYP21A1P | 6 | + | LOC106780804 | 6 | + |
| exon-intron | CYP21A1P | 6 | - | C4A | 6 | - |
| exon-intron | CYP21A2 | 6 | + | TNXB | 6 | + |
| exon-intron | CYP21A2 | 6 | + | LOC106780803 | 6 | + |
| exon-intron | CYP21A2 | 6 | + | LOC106780804 | 6 | + |
| exon-exon | CYP21A2 | 6 | + | TNXB | 6 | + |
| exon-exon | CYP2A7 | 19 | - | CYP2A6 | 19 | - |
| exon-exon | CYP2A7 | 19 | - | CYP2A6 | 19 | - |
| intron-exon | CYP2D6 | 22 | + | LOC112268294 | 22 | + |
| intron-exon | CYP2D6 | 22 | + | LOC102723722 | 22 | + |
| exon-exon | CYP2J2 | 1 | - | ARHGAP21 | 10 | + |
| exon-intron | CYP3A5 | 7 | - | ZSCAN25 | 7 | - |
| exon-exon | CYP3A7-CYP3A51P | 7 | - | CYP3A7-CYP3A51P | 7 | - |
| exon-intron | CYP4B1 | 1 | + | LOC105378699 | 1 | + |
| exon-exon | CYP4B1 | 1 | - | CYP4B1 | 1 | + |
| intron-exon | CYP4F29P | 21 | - | CYP4F29P | 21 | + |
| exon-exon | CYP51A1-AS1 | 7 | - | CYP51A1 | 7 | - |
| exon-exon | CYP51A1-AS1 | 7 | - | CYP51A1 | 7 | - |
| exon-exon | CYP51A1-AS1 | 7 | - | CYP51A1 | 7 | - |
| exon-exon | CYP51A1-AS1 | 7 | - | CYP51A1 | 7 | - |
| exon-exon | CYP51A1-AS1 | 7 | - | CYP51A1 | 7 | - |
| exon-exon | CYP51A1-AS1 | 7 | - | CYP51A1P1 | 3 | - |
| exon-exon | CYP51A1-AS1 | 7 | - | CYP51A1 | 7 | - |
| exon-exon | CYP51A1-AS1 | 7 | - | CYP51A1P1 | 3 | - |
| exon-exon | CYP51A1-AS1 | 7 | - | CYP51A1 | 7 | - |
| exon-exon | CYP51A1-AS1 | 7 | - | CYP51A1 | 7 | - |
| exon-exon | CYP51A1-AS1 | 7 | - | CYP51A1 | 7 | - |
| exon-exon | CYP51A1-AS1 | 7 | - | CYP51A1 | 7 | - |
| exon-exon | CYP51A1-AS1 | 7 | - | CYP51A1P1 | 3 | - |
| intron-exon | CYP51A1-AS1 | 7 | - | CYP51A1 | 7 | - |
| exon-exon | CYP51A1-AS1 | 7 | - | CYP51A1 | 7 | - |
| intron-exon | CYP7A1 | 8 | - | UBXN2B | 8 | - |
| intron-exon | CYREN | 7 | + | TMEM140 | 7 | + |
| exon-exon | CYSTM1 | 5 | + | PFDN1 | 5 | + |
| exon-intron | CYSTM1 | 5 | + | LOC102724701 | 21 | - |
| exon-intron | CYTB | MT | + | PRKACB | 1 | + |
| exon-intron | CYTB | MT | - | RNR2 | MT | - |
| exon-intron | CYTB | MT | - | TBC1D22A | 22 | + |
| exon-exon | CYTB | MT | - | SARAF | 8 | - |
| exon-exon | CYTB | MT | - | VCL | 10 | - |
| exon-exon | CYTB | MT | - | CYTB | MT | + |
| exon-intron | CYTB | MT | - | KCNQ3 | 8 | + |
| exon-intron | CYTB | MT | - | LEPR | 1 | - |
| exon-exon | CYTH2 | 19 | - | KCNJ14 | 19 | - |
| exon-exon | CYTH2 | 19 | - | KCNJ14 | 19 | - |
| exon-intron | CYTOR | 2 | - | LINC01943 | 2 | - |
| exon-exon | CZ1P-ASNS | 7 | + | CZ1P-ASNS | 7 | + |
| exon-exon | CZ1P-ASNS | 7 | - | CZ1P-ASNS | 7 | - |
| exon-exon | CZ1P-ASNS | 7 | - | CZ1P-ASNS | 7 | - |
| exon-exon | CZ1P-ASNS | 7 | - | CZ1P-ASNS | 7 | - |
| exon-exon | CZ1P-ASNS | 7 | - | CZ1P-ASNS | 7 | - |
| exon-exon | CZ1P-ASNS | 7 | - | CZ1P-ASNS | 7 | - |
| exon-exon | CZ1P-ASNS | 7 | - | CZ1P-ASNS | 7 | - |
| exon-exon | CZ1P-ASNS | 7 | - | CZ1P-ASNS | 7 | - |
| exon-exon | CZ1P-ASNS | 7 | - | CZ1P-ASNS | 7 | - |
| exon-exon | CZ1P-ASNS | 7 | - | CZ1P-ASNS | 7 | - |
| exon-exon | CZ1P-ASNS | 7 | - | CZ1P-ASNS | 7 | - |
| exon-exon | CZ1P-ASNS | 7 | - | CZ1P-ASNS | 7 | - |
| exon-exon | CZ1P-ASNS | 7 | - | CZ1P-ASNS | 7 | - |
| exon-exon | CZ1P-ASNS | 7 | - | CZ1P-ASNS | 7 | - |
| exon-exon | CZ1P-ASNS | 7 | - | CZ1P-ASNS | 7 | - |
| exon-exon | CZ1P-ASNS | 7 | - | CZ1P-ASNS | 7 | - |
| exon-intron | DAAM1 | 14 | - | CCNT1 | 12 | - |
| exon-exon | DAB2 | 5 | - | C9 | 5 | - |
| exon-intron | DACH1 | 13 | - | TEX11 | X | + |
| intron-exon | DACT3 | 19 | - | PNMA8A | 19 | - |
| exon-exon | DALRD3 | 3 | - | WDR6 | 3 | - |
| exon-exon | DAP3 | 1 | - | YY1AP1 | 1 | - |
| exon-exon | DAPK2 | 15 | + | LOC101928988 | 15 | + |
| exon-exon | DAPK2 | 15 | - | MAP2K5 | 15 | + |
| exon-intron | DAPL1 | 2 | + | OR7E89P | 2 | + |
| intron-exon | DARS-AS1 | 2 | - | DARS1 | 2 | - |
| intron-exon | DARS-AS1 | 2 | - | DARS1 | 2 | - |
| exon-exon | DAZAP1 | 19 | + | MAD1L1 | 7 | - |
| exon-exon | DAZAP2 | 12 | + | LOC102723983 | 12 | + |
| exon-intron | DAZAP2 | 12 | - | RNR1 | MT | - |
| exon-exon | DAZAP2 | 12 | - | SMAGP | 12 | - |
| exon-intron | DBI | 2 | + | RASA4DP | 7 | - |
| exon-exon | DBN1 | 5 | - | C6orf62 | 6 | - |
| exon-exon | DBNL | 7 | - | PGAM2 | 7 | - |
| exon-exon | DBP | 19 | - | SPHK2 | 19 | - |
| exon-exon | DBP | 19 | - | SPHK2 | 19 | - |
| exon-exon | DBP | 19 | - | SPHK2 | 19 | - |
| exon-exon | DBP | 19 | - | SPHK2 | 19 | - |
| intron-exon | DBP | 19 | - | PRKCA | 17 | + |
| intron-exon | DCAF1 | 3 | + | RAD54L2 | 3 | + |
| exon-exon | DCAF1 | 3 | - | RBM15B | 3 | - |
| exon-intron | DCAF11 | 14 | + | FITM1 | 14 | + |
| exon-exon | DCAF11 | 14 | - | NRL | 14 | - |
| exon-exon | DCAF11 | 14 | - | NRL | 14 | - |
| exon-intron | DCAF6 | 1 | + | APOLD1 | 12 | - |
| exon-exon | DCAKD | 17 | - | HECTD4 | 12 | - |
| intron-exon | DCBLD2 | 3 | - | ST3GAL6 | 3 | - |
| exon-intron | DCDC1 | 11 | + | LOC105376611 | 11 | + |
| exon-exon | DCHS2 | 4 | - | LOC101927947 | 4 | - |
| exon-exon | DCK | 4 | - | MOB1B | 4 | - |
| exon-exon | DCK | 4 | - | MOB1B | 4 | - |
| exon-exon | DCK | 4 | - | MOB1B | 4 | - |
| exon-exon | DCK | 4 | - | MOB1B | 4 | - |
| exon-exon | DCK | 4 | - | MOB1B | 4 | - |
| exon-exon | DCK | 4 | - | MOB1B | 4 | - |
| exon-intron | DCLK1 | 13 | - | NR2F2-AS1 | 15 | - |
| exon-intron | DCLRE1A | 10 | + | LOC107984271 | 10 | + |
| intron-exon | DCLRE1B | 1 | - | AP4B1 | 1 | - |
| intron-exon | DCLRE1B | 1 | - | AP4B1 | 1 | - |
| intron-exon | DCLRE1B | 1 | - | AP4B1 | 1 | - |
| intron-exon | DCLRE1B | 1 | - | AP4B1 | 1 | - |
| intron-exon | DCLRE1B | 1 | - | AP4B1 | 1 | - |
| intron-exon | DCLRE1B | 1 | - | AP4B1 | 1 | - |
| intron-exon | DCLRE1B | 1 | - | AP4B1 | 1 | - |
| intron-exon | DCLRE1B | 1 | - | AP4B1 | 1 | - |
| intron-exon | DCLRE1B | 1 | - | AP4B1 | 1 | - |
| intron-exon | DCLRE1B | 1 | - | AP4B1 | 1 | - |
| intron-exon | DCLRE1B | 1 | - | AP4B1 | 1 | - |
| exon-exon | DCLRE1B | 1 | - | AP4B1 | 1 | - |
| exon-intron | DCST1 | 1 | + | ADAM15 | 1 | + |
| exon-exon | DCST1 | 1 | + | ADAM15 | 1 | + |
| intron-exon | DCST1-AS1 | 1 | + | ADAM15 | 1 | + |
| exon-exon | DCST1-AS1 | 1 | - | DCST1 | 1 | - |
| exon-exon | DCST1-AS1 | 1 | - | DCST1 | 1 | - |
| exon-exon | DCST1-AS1 | 1 | - | DCST1 | 1 | - |
| intron-exon | DCTN1 | 2 | + | DCTN1-AS1 | 2 | + |
| exon-exon | DCTN1 | 2 | - | NCOR2 | 12 | - |
| exon-exon | DCTN2 | 12 | - | MBD6 | 12 | - |
| exon-exon | DCTN2 | 12 | - | MBD6 | 12 | - |
| exon-exon | DCTN2 | 12 | - | MBD6 | 12 | - |
| exon-exon | DCTN2 | 12 | - | MBD6 | 12 | - |
| exon-exon | DCTN2 | 12 | - | MBD6 | 12 | - |
| exon-exon | DCTN2 | 12 | - | MBD6 | 12 | - |
| intron-exon | DCUN1D2 | 13 | + | TMCO3 | 13 | + |
| exon-intron | DCUN1D3 | 16 | - | POLA1 | X | + |
| exon-intron | DCXR | 17 | - | LOC107984737 | 15 | + |
| intron-exon | DDA1 | 19 | - | ABHD8 | 19 | - |
| intron-exon | DDAH1 | 1 | - | C1orf52 | 1 | - |
| exon-exon | DDB1 | 11 | + | DDB1 | 11 | - |
| exon-intron | DDC | 7 | + | DDC-AS1 | 7 | + |
| exon-exon | DDIT3 | 12 | - | MARS1 | 12 | - |
| exon-exon | DDIT3 | 12 | - | MARS1 | 12 | - |
| exon-exon | DDIT3 | 12 | - | MARS1 | 12 | - |
| exon-exon | DDIT3 | 12 | - | MARS1 | 12 | - |
| exon-intron | DDOST | 1 | + | LOC105369352 | 11 | - |
| exon-intron | DDOST | 1 | + | LOC105369352 | 11 | - |
| exon-exon | DDOST | 1 | - | GAPDH | 12 | - |
| exon-exon | DDT | 22 | - | LOC107985558 | 22 | - |
| exon-intron | DDT | 22 | - | LOC107985558 | 22 | - |
| exon-intron | DDT | 22 | - | LOC107985558 | 22 | - |
| exon-exon | DDT | 22 | - | LOC107985558 | 22 | - |
| exon-exon | DDTL | 22 | + | DDT | 22 | + |
| exon-exon | DDTL | 22 | + | DDTL | 22 | - |
| exon-exon | DDTL | 22 | + | DDTL | 22 | - |
| exon-exon | DDTL | 22 | + | DDTL | 22 | - |
| exon-exon | DDTL | 22 | + | DDTL | 22 | - |
| exon-exon | DDTL | 22 | + | DDTL | 22 | - |
| exon-exon | DDTL | 22 | + | DDTL | 22 | - |
| exon-exon | DDTL | 22 | + | DDTL | 22 | - |
| exon-exon | DDTL | 22 | + | DDTL | 22 | - |
| exon-exon | DDTL | 22 | + | DDTL | 22 | - |
| exon-exon | DDTL | 22 | + | DDTL | 22 | - |
| exon-exon | DDTL | 22 | + | DDTL | 22 | - |
| exon-exon | DDTL | 22 | + | DDTL | 22 | - |
| exon-exon | DDTL | 22 | + | DDTL | 22 | - |
| exon-exon | DDTL | 22 | + | DDTL | 22 | - |
| exon-exon | DDTL | 22 | + | DDTL | 22 | - |
| exon-intron | DDTL | 22 | + | DDTL | 22 | - |
| exon-exon | DDTL | 22 | + | DDTL | 22 | - |
| exon-exon | DDTL | 22 | + | DDTL | 22 | - |
| exon-exon | DDTL | 22 | + | DDTL | 22 | - |
| exon-exon | DDTL | 22 | + | DDTL | 22 | - |
| exon-exon | DDTL | 22 | + | DDTL | 22 | - |
| exon-exon | DDTL | 22 | + | DDTL | 22 | - |
| exon-exon | DDTL | 22 | + | DDTL | 22 | - |
| exon-exon | DDTL | 22 | + | DDTL | 22 | - |
| exon-exon | DDTL | 22 | + | DDTL | 22 | - |
| exon-exon | DDTL | 22 | + | DDTL | 22 | - |
| exon-exon | DDTL | 22 | + | DDTL | 22 | - |
| exon-exon | DDX17 | 22 | + | RN7SK | 6 | - |
| exon-exon | DDX24 | 14 | - | SPA17 | 11 | + |
| exon-intron | DDX3X | X | - | IGFBP1 | 7 | - |
| intron-exon | DDX4 | 5 | - | SLC38A9 | 5 | - |
| intron-exon | DDX42 | 17 | - | CCDC47 | 17 | - |
| exon-exon | DDX43 | 6 | - | OOEP | 6 | - |
| exon-exon | DDX50 | 10 | + | HNRNPH3 | 10 | + |
| exon-intron | DDX50 | 10 | + | DDX21 | 10 | + |
| exon-exon | DDX50 | 10 | + | DDX21 | 10 | + |
| exon-intron | DDX52 | 17 | + | LOC105371755 | 17 | + |
| exon-intron | DDX52 | 17 | + | LOC105371755 | 17 | + |
| exon-intron | DDX52 | 17 | - | FTX | X | - |
| exon-exon | DDX56 | 7 | + | TMED4 | 7 | + |
| exon-exon | DDX58 | 9 | + | TOPORS | 9 | + |
| intron-exon | DDX59-AS1 | 1 | - | DDX59 | 1 | - |
| intron-exon | DEAF1 | 11 | + | EPS8L2 | 11 | + |
| intron-exon | DEAF1 | 11 | + | EPS8L2 | 11 | + |
| intron-exon | DECR1 | 8 | - | NBN | 8 | - |
| exon-intron | DECR2 | 16 | + | LOC102723945 | 16 | + |
| exon-exon | DEFA1B | 8 | + | DEFA3 | 8 | + |
| intron-exon | DEFB109D | 8 | - | FAM66E | 8 | - |
| exon-exon | DEGS2 | 14 | - | EVL | 14 | - |
| exon-exon | DEGS2 | 14 | - | EVL | 14 | - |
| exon-exon | DEGS2 | 14 | - | EVL | 14 | - |
| exon-exon | DEGS2 | 14 | - | EVL | 14 | - |
| exon-exon | DELEC1 | 9 | + | TNC | 9 | + |
| exon-intron | DENND10 | 10 | + | LOC105372648 | 20 | - |
| exon-intron | DENND3 | 8 | - | SLC35F3 | 1 | - |
| exon-exon | DENND4A | 15 | - | SLC24A1 | 15 | - |
| exon-exon | DENND4B | 1 | - | GTF3C5 | 9 | - |
| intron-exon | DENND4B | 1 | - | LOC101928059 | 1 | - |
| intron-exon | DENND4B | 1 | - | LOC101928059 | 1 | - |
| intron-exon | DEPDC1-AS1 | 1 | - | DEPDC1 | 1 | - |
| intron-exon | DEPDC1-AS1 | 1 | - | DEPDC1 | 1 | - |
| intron-exon | DEPDC1-AS1 | 1 | - | DEPDC1 | 1 | - |
| intron-exon | DEPDC1-AS1 | 1 | - | DEPDC1 | 1 | - |
| intron-exon | DEPDC1-AS1 | 1 | - | DEPDC1 | 1 | - |
| intron-exon | DEPDC1-AS1 | 1 | - | DEPDC1 | 1 | - |
| intron-exon | DEPDC1-AS1 | 1 | - | DEPDC1 | 1 | - |
| intron-exon | DEPDC1-AS1 | 1 | - | DEPDC1 | 1 | - |
| intron-exon | DEPDC1-AS1 | 1 | - | DEPDC1 | 1 | - |
| intron-exon | DEPDC1-AS1 | 1 | - | DEPDC1 | 1 | - |
| intron-exon | DEPDC1-AS1 | 1 | - | DEPDC1 | 1 | - |
| intron-exon | DEPDC1-AS1 | 1 | - | DEPDC1 | 1 | - |
| intron-exon | DEPDC1-AS1 | 1 | - | DEPDC1 | 1 | - |
| intron-exon | DEPDC4 | 12 | - | ACTR6 | 12 | - |
| exon-exon | DEPP1 | 10 | - | DES | 2 | - |
| intron-exon | DERA | 12 | - | EGLN3P1 | 12 | - |
| exon-exon | DES | 2 | + | PFN1 | 17 | - |
| exon-intron | DESI1 | 22 | - | RANGAP1 | 22 | - |
| intron-exon | DET1 | 15 | + | ANKRD30A | 10 | - |
| exon-intron | DFFA | 1 | - | DYM | 18 | - |
| exon-exon | DGAT1 | 8 | - | HSF1 | 8 | - |
| exon-exon | DGAT1 | 8 | - | HSF1 | 8 | - |
| intron-exon | DGCR2 | 22 | + | SIVA1 | 14 | + |
| exon-exon | DGLUCY | 14 | - | RPS6KA5 | 14 | - |
| exon-exon | DGLUCY | 14 | - | RPS6KA5 | 14 | - |
| exon-exon | DGLUCY | 14 | - | RPS6KA5 | 14 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| intron-exon | DGUOK-AS1 | 2 | - | DGUOK | 2 | - |
| exon-exon | DHCR24 | 1 | + | SYTL4 | X | + |
| exon-intron | DHFRP1 | 18 | - | SYN3 | 22 | - |
| exon-intron | DHFRP1 | 18 | - | PSMA8 | 18 | - |
| exon-exon | DHH | 12 | + | LOC105369759 | 12 | + |
| exon-intron | DHPS | 19 | - | WDR83OS | 19 | - |
| exon-exon | DHPS | 19 | - | WDR83OS | 19 | - |
| exon-intron | DHPS | 19 | - | WDR83OS | 19 | - |
| exon-exon | DHPS | 19 | - | WDR83OS | 19 | - |
| exon-exon | DHPS | 19 | - | WDR83OS | 19 | - |
| exon-exon | DHPS | 19 | - | WDR83OS | 19 | - |
| intron-exon | DHRS1 | 14 | - | RABGGTA | 14 | - |
| intron-exon | DHRS3 | 1 | - | ZNF44 | 19 | + |
| exon-exon | DHRS4 | 14 | + | DHRS4L2 | 14 | + |
| exon-exon | DHRS4 | 14 | + | DHRS4L2 | 14 | + |
| exon-intron | DHRS4-AS1 | 14 | + | SPTLC1 | 9 | - |
| exon-exon | DHRS4L2 | 14 | + | DHRS4L1 | 14 | + |
| exon-exon | DHRS4L2 | 14 | + | DHRS4L1 | 14 | + |
| exon-exon | DHRS4L2 | 14 | - | DHRS4 | 14 | - |
| exon-exon | DHRS4L2 | 14 | - | DHRS4 | 14 | - |
| exon-exon | DHRS4L2 | 14 | - | DHRS4 | 14 | - |
| exon-exon | DHRS4L2 | 14 | - | DHRS4 | 14 | - |
| exon-intron | DHRS4L2 | 14 | - | DHRS4 | 14 | - |
| exon-exon | DHRS4L2 | 14 | - | DHRS4 | 14 | - |
| exon-exon | DHRS4L2 | 14 | - | DHRS4 | 14 | - |
| exon-exon | DHRS4L2 | 14 | - | DHRS4 | 14 | - |
| exon-exon | DHRS4L2 | 14 | - | DHRS4 | 14 | - |
| exon-exon | DHRS4L2 | 14 | - | DHRS4 | 14 | - |
| exon-exon | DHRS4L2 | 14 | - | DHRS4 | 14 | - |
| exon-exon | DHRS4L2 | 14 | - | DHRS4 | 14 | - |
| exon-exon | DHRS4L2 | 14 | - | DHRS4 | 14 | - |
| intron-exon | DHRS7 | 14 | - | PCNX4 | 14 | - |
| exon-exon | DHX15 | 4 | - | HAS2 | 8 | - |
| exon-exon | DHX29 | 5 | + | LOC105378973 | 5 | + |
| exon-exon | DHX30 | 3 | - | MIR1226 | 3 | - |
| exon-exon | DHX32 | 10 | - | BCCIP | 10 | - |
| exon-exon | DHX32 | 10 | - | BCCIP | 10 | - |
| intron-exon | DHX32 | 10 | - | BCCIP | 10 | - |
| intron-exon | DHX32 | 10 | - | BCCIP | 10 | - |
| intron-exon | DHX32 | 10 | - | BCCIP | 10 | - |
| intron-exon | DHX32 | 10 | - | BCCIP | 10 | - |
| intron-exon | DHX32 | 10 | - | BCCIP | 10 | - |
| intron-exon | DHX32 | 10 | - | BCCIP | 10 | - |
| intron-exon | DHX32 | 10 | - | BCCIP | 10 | - |
| intron-exon | DHX32 | 10 | - | BCCIP | 10 | - |
| intron-exon | DHX32 | 10 | - | BCCIP | 10 | - |
| intron-exon | DHX32 | 10 | - | BCCIP | 10 | - |
| intron-exon | DHX32 | 10 | - | BCCIP | 10 | - |
| intron-exon | DHX32 | 10 | - | BCCIP | 10 | - |
| intron-exon | DHX32 | 10 | - | BCCIP | 10 | - |
| intron-exon | DHX32 | 10 | - | BCCIP | 10 | - |
| intron-exon | DHX32 | 10 | - | BCCIP | 10 | - |
| intron-exon | DHX32 | 10 | - | BCCIP | 10 | - |
| intron-exon | DHX32 | 10 | - | BCCIP | 10 | - |
| intron-exon | DHX32 | 10 | - | BCCIP | 10 | - |
| intron-exon | DHX32 | 10 | - | BCCIP | 10 | - |
| intron-exon | DHX32 | 10 | - | BCCIP | 10 | - |
| intron-exon | DHX32 | 10 | - | BCCIP | 10 | - |
| intron-exon | DHX32 | 10 | - | BCCIP | 10 | - |
| exon-intron | DHX38 | 16 | + | LOC101927151 | 19 | - |
| exon-intron | DIAPH1 | 5 | + | POLR2J4 | 7 | - |
| intron-exon | DIAPH2 | X | - | HNRNPC | 14 | + |
| exon-intron | DIDO1 | 20 | + | LOC100507351 | 17 | - |
| exon-intron | DIDO1 | 20 | + | LOC100507351 | 17 | - |
| exon-intron | DIDO1 | 20 | + | LOC100507351 | 17 | - |
| exon-intron | DIDO1 | 20 | + | LOC100507351 | 17 | - |
| intron-exon | DIO2-AS1 | 14 | - | DIO2 | 14 | - |
| exon-exon | DIP2C | 10 | + | DIP2C | 10 | - |
| exon-intron | DIP2C | 10 | + | LOC105376340 | 10 | + |
| intron-exon | DIPK1A | 1 | - | RPL5 | 1 | - |
| intron-exon | DIPK1A | 1 | - | RPL5 | 1 | - |
| intron-exon | DIPK1A | 1 | - | RPL5 | 1 | - |
| intron-exon | DIPK1A | 1 | - | RPL5 | 1 | - |
| intron-exon | DIPK1A | 1 | - | RPL5 | 1 | - |
| intron-exon | DIPK1A | 1 | - | RPL5 | 1 | - |
| intron-exon | DIPK1A | 1 | - | RPL5 | 1 | - |
| intron-exon | DIPK1A | 1 | - | USO1 | 4 | - |
| intron-exon | DIPK1A | 1 | - | USO1 | 4 | - |
| exon-intron | DIPK1A | 1 | - | RPL5 | 1 | - |
| intron-exon | DIPK1B | 9 | + | SNHG7 | 9 | + |
| exon-intron | DIPK1B | 9 | + | AC074183.2 | 7 | + |
| intron-exon | DIPK1B | 9 | + | SNHG7 | 9 | + |
| exon-exon | DIS3 | 13 | - | BORA | 13 | - |
| exon-exon | DIS3 | 13 | - | BORA | 13 | - |
| exon-exon | DIS3 | 13 | - | BORA | 13 | - |
| exon-exon | DIS3 | 13 | - | BORA | 13 | - |
| exon-exon | DIS3 | 13 | - | BORA | 13 | - |
| exon-exon | DIS3 | 13 | - | BORA | 13 | - |
| exon-exon | DIS3 | 13 | - | BORA | 13 | - |
| intron-exon | DIS3L | 15 | - | CBX3 | 7 | + |
| exon-intron | DKC1 | X | + | OTX2-AS1 | 14 | - |
| intron-exon | DKKL1 | 19 | - | TEAD2 | 19 | - |
| intron-exon | DLC1 | 8 | + | LOC101930149 | 8 | + |
| intron-exon | DLEC1 | 3 | + | ACAA1 | 3 | + |
| intron-exon | DLEU1 | 13 | - | DLEU2 | 13 | - |
| exon-exon | DLEU2 | 13 | + | TRIM13 | 13 | + |
| exon-exon | DLEU2 | 13 | + | TRIM13 | 13 | + |
| exon-exon | DLEU2 | 13 | + | TRIM13 | 13 | + |
| intron-exon | DLEU2 | 13 | + | TRIM13 | 13 | + |
| intron-exon | DLEU2 | 13 | + | DLEU1 | 13 | + |
| exon-exon | DLG1 | 3 | + | DLG1-AS1 | 3 | + |
| intron-exon | DLG1-AS1 | 3 | - | DLG1 | 3 | - |
| exon-intron | DLG5 | 10 | - | P2RX6P | 22 | + |
| intron-exon | DLGAP1 | 18 | + | DLGAP1-AS1 | 18 | + |
| intron-exon | DLGAP1 | 18 | + | DLGAP1-AS1 | 18 | + |
| exon-intron | DLGAP4 | 20 | + | DLGAP4-AS1 | 20 | + |
| exon-intron | DLGAP4 | 20 | + | DLGAP4-AS1 | 20 | + |
| exon-intron | DLGAP4 | 20 | + | DLGAP4-AS1 | 20 | + |
| intron-exon | DLGAP4-AS1 | 20 | + | MYL9 | 20 | + |
| intron-exon | DLGAP4-AS1 | 20 | - | DLGAP4 | 20 | - |
| intron-exon | DLGAP4-AS1 | 20 | - | DLGAP4 | 20 | - |
| intron-exon | DLGAP4-AS1 | 20 | - | DLGAP4 | 20 | - |
| intron-exon | DLGAP4-AS1 | 20 | - | DLGAP4 | 20 | - |
| intron-exon | DLGAP4-AS1 | 20 | - | DLGAP4 | 20 | - |
| intron-exon | DLGAP4-AS1 | 20 | - | DLGAP4 | 20 | - |
| intron-exon | DLGAP4-AS1 | 20 | - | DLGAP4 | 20 | - |
| intron-exon | DLGAP4-AS1 | 20 | - | DLGAP4 | 20 | - |
| intron-exon | DLGAP4-AS1 | 20 | - | DLGAP4 | 20 | - |
| intron-exon | DLGAP4-AS1 | 20 | - | DLGAP4 | 20 | - |
| intron-exon | DLGAP4-AS1 | 20 | - | DLGAP4 | 20 | - |
| intron-exon | DLGAP4-AS1 | 20 | - | DLGAP4 | 20 | - |
| exon-exon | DLK1 | 14 | - | RPS11 | 19 | + |
| exon-exon | DLST | 14 | - | DLST | 14 | + |
| intron-exon | DLX6-AS1 | 7 | + | DLX6 | 7 | + |
| intron-exon | DLX6-AS1 | 7 | + | DLX6 | 7 | + |
| intron-exon | DLX6-AS1 | 7 | - | C1orf109 | 1 | - |
| exon-intron | DM1-AS | 19 | + | LOC107075317 | 19 | + |
| exon-exon | DMAC2L | 14 | + | CDKL1 | 14 | + |
| intron-exon | DMAC2L | 14 | - | L2HGDH | 14 | - |
| exon-intron | DMGDH | 5 | - | BHMT | 5 | - |
| exon-intron | DMGDH | 5 | - | BHMT | 5 | - |
| exon-exon | DMPK | 19 | + | DMWD | 19 | + |
| exon-exon | DMPK | 19 | + | DMWD | 19 | + |
| exon-exon | DMPK | 19 | + | DMWD | 19 | + |
| exon-exon | DMPK | 19 | + | DMWD | 19 | + |
| exon-exon | DMTF1 | 7 | + | C2orf27A | 2 | + |
| exon-exon | DMTF1 | 7 | + | TMEM243 | 7 | + |
| exon-exon | DMWD | 19 | - | DMPK | 19 | - |
| exon-exon | DMWD | 19 | - | DMPK | 19 | - |
| exon-exon | DMWD | 19 | - | DMPK | 19 | - |
| exon-exon | DMWD | 19 | - | DMPK | 19 | - |
| intron-exon | DNA2 | 10 | - | POMT1 | 9 | - |
| exon-exon | DNAAF1 | 16 | + | TAF1C | 16 | + |
| exon-intron | DNAAF3 | 19 | + | LOC101930593 | 19 | + |
| exon-exon | DNAAF3 | 19 | - | TNNI3 | 19 | - |
| exon-intron | DNAAF4 | 15 | - | DNAAF4-CCPG1 | 15 | - |
| exon-intron | DNAAF4 | 15 | - | DNAAF4-CCPG1 | 15 | - |
| exon-exon | DNAAF4-CCPG1 | 15 | - | PIGB | 15 | - |
| exon-exon | DNAAF4-CCPG1 | 15 | - | DNAAF4-CCPG1 | 15 | - |
| intron-exon | DNAH11 | 7 | - | UBE2Q2 | 15 | - |
| intron-exon | DNAH17 | 17 | - | PGS1 | 17 | - |
| intron-exon | DNAH17 | 17 | - | PGS1 | 17 | - |
| intron-exon | DNAH17 | 17 | - | PGS1 | 17 | - |
| exon-exon | DNAH7 | 2 | + | LOC107985972 | 2 | + |
| exon-exon | DNAH7 | 2 | + | LOC107985972 | 2 | + |
| exon-exon | DNAH7 | 2 | - | SLC39A10 | 2 | - |
| exon-exon | DNAH7 | 2 | - | SLC39A10 | 2 | - |
| exon-exon | DNAH7 | 2 | - | SLC39A10 | 2 | - |
| exon-exon | DNAH7 | 2 | - | SLC39A10 | 2 | - |
| exon-exon | DNAH7 | 2 | - | SLC39A10 | 2 | - |
| exon-exon | DNAH7 | 2 | - | SLC39A10 | 2 | - |
| exon-exon | DNAH7 | 2 | - | SLC39A10 | 2 | - |
| exon-exon | DNAH7 | 2 | - | SLC39A10 | 2 | - |
| exon-exon | DNAH7 | 2 | - | SLC39A10 | 2 | - |
| exon-exon | DNAH7 | 2 | - | SLC39A10 | 2 | - |
| exon-exon | DNAH7 | 2 | - | SLC39A10 | 2 | - |
| exon-exon | DNAH7 | 2 | - | SLC39A10 | 2 | - |
| exon-exon | DNAH7 | 2 | - | SLC39A10 | 2 | - |
| exon-exon | DNAH7 | 2 | - | SLC39A10 | 2 | - |
| exon-exon | DNAH7 | 2 | - | SLC39A10 | 2 | - |
| exon-exon | DNAH7 | 2 | - | SLC39A10 | 2 | - |
| exon-exon | DNAH7 | 2 | - | SLC39A10 | 2 | - |
| exon-exon | DNAH7 | 2 | - | SLC39A10 | 2 | - |
| exon-exon | DNAH7 | 2 | - | SLC39A10 | 2 | - |
| exon-exon | DNAH7 | 2 | - | SLC39A10 | 2 | - |
| exon-exon | DNAH7 | 2 | - | SLC39A10 | 2 | - |
| exon-exon | DNAH7 | 2 | - | SLC39A10 | 2 | - |
| exon-exon | DNAH7 | 2 | - | SLC39A10 | 2 | - |
| exon-exon | DNAH7 | 2 | - | SLC39A10 | 2 | - |
| exon-exon | DNAH7 | 2 | - | SLC39A10 | 2 | - |
| exon-exon | DNAH7 | 2 | - | SLC39A10 | 2 | - |
| exon-intron | DNAJA2 | 16 | - | ITPK1 | 14 | + |
| intron-exon | DNAJA4 | 15 | + | WDR61 | 15 | + |
| exon-exon | DNAJB4 | 1 | + | GIPC2 | 1 | + |
| exon-intron | DNAJB6 | 7 | + | FTX | X | - |
| exon-intron | DNAJB6 | 7 | + | DNAJB6P1 | 11 | - |
| exon-exon | DNAJC11 | 1 | + | DDX17 | 22 | - |
| exon-intron | DNAJC14 | 12 | - | ORMDL2 | 12 | - |
| exon-intron | DNAJC14 | 12 | - | ORMDL2 | 12 | - |
| exon-intron | DNAJC14 | 12 | - | ORMDL2 | 12 | - |
| exon-exon | DNAJC14 | 12 | - | SARNP | 12 | - |
| exon-intron | DNAJC17 | 15 | - | GCHFR | 15 | - |
| exon-exon | DNAJC17 | 15 | - | GCHFR | 15 | - |
| exon-exon | DNAJC17 | 15 | - | GCHFR | 15 | - |
| exon-intron | DNAJC22 | 12 | - | DNAJC22 | 12 | + |
| exon-intron | DNAJC25 | 9 | + | ADAM10 | 15 | + |
| exon-exon | DNAJC25 | 9 | + | DNAJC25-GNG10 | 9 | + |
| exon-exon | DNAJC30 | 7 | + | BUD23 | 7 | + |
| intron-exon | DNAJC5 | 20 | - | HNRNPL | 19 | + |
| intron-exon | DNAJC5G | 2 | - | SLC30A3 | 2 | - |
| intron-exon | DNAJC7 | 17 | + | NKIRAS2 | 17 | + |
| intron-exon | DNAJC8 | 1 | - | PTAFR | 1 | - |
| intron-exon | DNAJC9 | 10 | - | FAM149B1 | 10 | - |
| exon-intron | DNAL1 | 14 | + | ENTPD5 | 14 | + |
| exon-exon | DNAL4 | 22 | - | SUN2 | 22 | - |
| exon-exon | DNASE1 | 16 | + | TRAP1 | 16 | + |
| exon-exon | DND1 | 5 | - | WDR55 | 5 | - |
| exon-exon | DND1 | 5 | - | WDR55 | 5 | - |
| intron-exon | DNM1 | 9 | - | CIZ1 | 9 | - |
| intron-exon | DNM1 | 9 | - | CIZ1 | 9 | - |
| intron-exon | DNM1 | 9 | - | CIZ1 | 9 | - |
| intron-exon | DNM1P47 | 15 | - | MALAT1 | 11 | + |
| exon-exon | DNM2 | 19 | + | TMED1 | 19 | + |
| intron-exon | DNMBP | 10 | + | DNMBP-AS1 | 10 | + |
| intron-exon | DNPEP | 2 | + | LOC105373884 | 2 | + |
| exon-exon | DOC2A | 16 | - | INO80E | 16 | - |
| intron-exon | DOCK3 | 3 | - | NQO1 | 16 | + |
| intron-exon | DOCK6 | 19 | + | ANGPTL8 | 19 | + |
| intron-exon | DOCK7 | 1 | + | ANGPTL3 | 1 | + |
| exon-exon | DOCK8 | 9 | + | LOC112268042 | 9 | + |
| exon-exon | DOK4 | 16 | - | POLR2C | 16 | - |
| exon-exon | DOK4 | 16 | - | POLR2C | 16 | - |
| exon-exon | DONSON | 21 | + | ATP5PO | 21 | + |
| exon-intron | DOT1L | 19 | - | COL6A1 | 21 | - |
| exon-intron | DOT1L | 19 | - | COL6A1 | 21 | - |
| exon-intron | DOT1L | 19 | - | COL6A1 | 21 | - |
| exon-intron | DOT1L | 19 | - | COL6A1 | 21 | - |
| exon-intron | DPCD | 10 | + | POLL | 10 | + |
| exon-exon | DPEP2 | 16 | + | DUS2 | 16 | + |
| exon-exon | DPEP2 | 16 | + | DUS2 | 16 | + |
| exon-intron | DPF2 | 11 | + | SART1 | 11 | - |
| exon-exon | DPH3P1 | 20 | + | SNRPB | 20 | - |
| exon-exon | DPH3P1 | 20 | + | SNRPB | 20 | - |
| exon-exon | DPH3P1 | 20 | + | SNRPB | 20 | - |
| intron-exon | DPH5 | 1 | - | SLC30A7 | 1 | - |
| exon-exon | DPH5 | 1 | - | ARSD | X | - |
| exon-exon | DPP3 | 11 | + | BBS1 | 11 | + |
| exon-intron | DPP9 | 19 | + | AURKA | 20 | - |
| exon-intron | DPP9 | 19 | + | LDB3 | 10 | - |
| exon-intron | DPP9 | 19 | + | LDB3 | 10 | - |
| exon-intron | DPP9 | 19 | + | DPP9-AS1 | 19 | + |
| exon-intron | DPY19L1 | 7 | - | DPY19L1P2 | 7 | + |
| intron-exon | DPY19L1P1 | 7 | - | AVL9 | 7 | - |
| intron-exon | DPY19L1P1 | 7 | - | AVL9 | 7 | - |
| intron-exon | DPY19L1P1 | 7 | - | RNF167 | 17 | - |
| exon-exon | DPYSL2 | 8 | - | PNMA2 | 8 | - |
| exon-intron | DPYSL2 | 8 | - | CNTN5 | 11 | + |
| exon-exon | DPYSL2 | 8 | - | RBM8A | 1 | + |
| intron-exon | DPYSL4 | 10 | - | LOC105378567 | 10 | - |
| intron-exon | DRAXIN | 1 | - | MAD2L2 | 1 | - |
| exon-intron | DRAXIN | 1 | - | LOC105370826 | 15 | + |
| exon-exon | DRG1 | 22 | + | DRG1P1 | 2 | - |
| exon-intron | DRICH1 | 22 | - | SRSF3 | 6 | + |
| exon-intron | DSC2 | 18 | + | DSCAS | 18 | + |
| exon-intron | DSC2 | 18 | + | DSCAS | 18 | + |
| intron-exon | DSCAM | 21 | - | TSTD2 | 9 | - |
| intron-exon | DSCAS | 18 | - | DSC2 | 18 | - |
| exon-exon | DSCR8 | 21 | + | KCNJ15 | 21 | + |
| intron-exon | DSG1-AS1 | 18 | - | DSG1 | 18 | - |
| intron-exon | DSG2-AS1 | 18 | - | DSG2 | 18 | - |
| exon-intron | DSTN | 20 | - | LOC105369632 | 12 | - |
| exon-intron | DSTYK | 1 | + | MCUB | 4 | - |
| exon-intron | DTD2 | 14 | - | LOC101927124 | 14 | - |
| exon-exon | DTL | 1 | - | INTS7 | 1 | - |
| exon-exon | DTNB | 2 | + | DTNB-AS1 | 2 | + |
| exon-exon | DTNB | 2 | + | DTNB-AS1 | 2 | + |
| exon-exon | DTNB | 2 | + | DTNB-AS1 | 2 | + |
| exon-exon | DTNB | 2 | + | DTNB-AS1 | 2 | + |
| exon-intron | DTNBP1 | 6 | + | LOC105374947 | 6 | + |
| exon-intron | DTX2P1-UPK3BP1-PMS2P11 | 7 | - | DTX2P1-UPK3BP1-PMS2P11 | 7 | + |
| intron-exon | DTX3L | 3 | - | PARP9 | 3 | - |
| exon-exon | DUOXA1 | 15 | - | DUOXA2 | 15 | - |
| exon-exon | DUS4L | 7 | + | BCAP29 | 7 | + |
| exon-exon | DUS4L-BCAP29 | 7 | + | WBP1LP2 | 7 | + |
| intron-exon | DUSP11 | 2 | + | AHI1 | 6 | - |
| exon-exon | DUX4L50 | 9 | - | LINC00537 | 9 | - |
| exon-exon | DUXAP8 | 22 | + | NBEAP3 | 22 | + |
| exon-exon | DUXAP9 | 14 | - | LINC01297-DUXAP10-NBEAP6 | 14 | + |
| intron-exon | DXO | 6 | + | STK19 | 6 | + |
| exon-intron | DXO | 6 | + | STK19 | 6 | + |
| exon-intron | DXO | 6 | + | STK19 | 6 | + |
| exon-intron | DXO | 6 | + | STK19 | 6 | + |
| exon-intron | DXO | 6 | - | SKIV2L | 6 | - |
| intron-exon | DYM | 18 | - | LOC100129878 | 18 | - |
| exon-exon | DYNC1I2 | 2 | + | DYNC1I2P1 | 10 | + |
| exon-exon | DYNC1LI1 | 3 | - | ZRANB3 | 2 | - |
| exon-intron | DYNLL1 | 12 | + | MSL1 | 17 | + |
| exon-exon | DYNLL1 | 12 | - | PPIL3 | 2 | + |
| exon-intron | DYNLT1 | 6 | - | PPP1R8 | 1 | - |
| exon-exon | DYNLT3 | X | - | SLC18B1 | 6 | - |
| intron-exon | DYRK1A | 21 | - | MTMR1 | X | + |
| intron-exon | DYRK2 | 12 | + | RPL7P1 | 5 | + |
| exon-exon | DYRK2 | 12 | + | DYRK2 | 12 | - |
| exon-exon | DYRK2 | 12 | + | DYRK2 | 12 | - |
| intron-exon | DZANK1 | 20 | + | PLEKHG1 | 6 | - |
| exon-exon | DZIP3 | 3 | - | CIP2A | 3 | - |
| exon-intron | E2F3 | 6 | - | MMADHC-DT | 2 | - |
| exon-exon | EAF1 | 3 | + | COLQ | 3 | + |
| exon-exon | EARS2 | 16 | - | GGA2 | 16 | - |
| exon-exon | EARS2 | 16 | - | GGA2 | 16 | - |
| exon-intron | EBF3 | 10 | - | PREPL | 2 | - |
| exon-intron | EBI3 | 19 | - | OGDH | 7 | + |
| exon-intron | ECD | 10 | - | NUDT13 | 10 | - |
| exon-exon | ECD | 10 | - | P4HA1 | 10 | - |
| exon-intron | ECE1 | 1 | + | ALPL | 1 | + |
| exon-exon | ECH1 | 19 | + | ECH1 | 19 | - |
| exon-exon | ECH1 | 19 | + | ECH1 | 19 | - |
| exon-exon | ECH1 | 19 | + | ECH1 | 19 | - |
| exon-exon | ECH1 | 19 | + | ECH1 | 19 | - |
| exon-exon | ECH1 | 19 | + | ECH1 | 19 | - |
| exon-exon | ECH1 | 19 | + | ECH1 | 19 | - |
| exon-exon | ECH1 | 19 | + | ECH1 | 19 | - |
| intron-exon | ECHDC1 | 6 | + | LOC105377994 | 6 | + |
| exon-intron | ECHDC1 | 6 | + | LOC105377994 | 6 | + |
| exon-intron | ECHDC1 | 6 | + | LOC105377994 | 6 | + |
| exon-intron | EDAR | 2 | - | RANBP2 | 2 | - |
| intron-exon | EDC3 | 15 | - | CLK3 | 15 | - |
| exon-intron | EDC4 | 16 | - | LOC105376844 | 17 | + |
| intron-exon | EDIL3 | 5 | + | RBM8B | 14 | + |
| exon-exon | EDIL3-DT | 5 | - | EDIL3 | 5 | - |
| intron-exon | EDNRB | 13 | + | OBI1-AS1 | 13 | + |
| exon-intron | EEA1 | 12 | - | WDR61 | 15 | - |
| exon-intron | EEF1A1 | 6 | + | SEMA5A | 5 | + |
| exon-exon | EEF1A1 | 6 | - | RPL34 | 4 | + |
| exon-exon | EEF1A1 | 6 | - | RPL34 | 4 | + |
| exon-exon | EEF1A1P13 | 5 | - | EEF1A1 | 6 | + |
| exon-intron | EEF1A1P13 | 5 | - | LOC105377307 | 4 | - |
| exon-intron | EEF1A1P5 | 9 | + | EEF1A1P6 | 7 | - |
| exon-exon | EEF1A1P5 | 9 | + | EEF1A1 | 6 | + |
| exon-exon | EEF1A1P5 | 9 | - | POLE | 12 | + |
| intron-exon | EEF1A1P9 | 4 | - | RNA45SN1 | 21 | - |
| exon-exon | EEF1AKMT2 | 10 | - | FAM53B | 10 | - |
| exon-exon | EEF1AKMT3 | 12 | + | TSFM | 12 | + |
| exon-exon | EEF1AKMT4 | 3 | + | ECE2 | 3 | + |
| exon-exon | EEF1AKMT4-ECE2 | 3 | - | EEF1AKMT4-ECE2 | 3 | - |
| exon-exon | EEF1D | 8 | + | EEF1D | 8 | - |
| exon-exon | EEF1D | 8 | + | EEF1D | 8 | - |
| exon-exon | EEF1D | 8 | + | EEF1D | 8 | - |
| exon-exon | EEF1D | 8 | - | NFKBIB | 19 | + |
| exon-intron | EEF1E1-BLOC1S5 | 6 | - | BLOC1S5-TXNDC5 | 6 | - |
| exon-intron | EEF1E1-BLOC1S5 | 6 | - | ETNK1 | 12 | - |
| exon-intron | EEF1E1-BLOC1S5 | 6 | - | AF121898.1 | 8 | - |
| exon-exon | EEF1G | 11 | + | TNC | 9 | + |
| exon-exon | EEF1G | 11 | - | EEF1G | 11 | + |
| intron-exon | EEF1G | 11 | - | GNA11 | 19 | - |
| intron-exon | EEF1G | 11 | - | GTF3C3 | 2 | + |
| intron-exon | EEF1G | 11 | - | RAB7A | 3 | - |
| intron-exon | EEF1G | 11 | - | SRSF1 | 17 | + |
| exon-intron | EEF2 | 19 | - | KNL1 | 15 | - |
| intron-exon | EEF2K | 16 | - | MDM2 | 12 | + |
| exon-exon | EEF2KMT | 16 | - | ALG1 | 16 | - |
| exon-exon | EEF2KMT | 16 | - | ALG1 | 16 | - |
| exon-exon | EEF2KMT | 16 | - | ALG1 | 16 | - |
| exon-exon | EEF2KMT | 16 | - | ALG1 | 16 | - |
| exon-exon | EEF2KMT | 16 | - | ALG1 | 16 | - |
| exon-exon | EEF2KMT | 16 | - | ALG1 | 16 | - |
| exon-exon | EEF2KMT | 16 | - | ALG1L6P | 3 | - |
| exon-exon | EEF2KMT | 16 | - | ALG1 | 16 | - |
| exon-exon | EEF2KMT | 16 | - | ALG1 | 16 | - |
| exon-exon | EEF2KMT | 16 | - | ALG1 | 16 | - |
| exon-exon | EEF2KMT | 16 | - | ALG1 | 16 | - |
| exon-exon | EEF2KMT | 16 | - | ALG1 | 16 | - |
| exon-exon | EEF2KMT | 16 | - | ALG1 | 16 | - |
| exon-exon | EFCAB10 | 7 | - | RINT1 | 7 | - |
| exon-exon | EFCAB10 | 7 | - | RINT1 | 7 | - |
| exon-exon | EFCAB10 | 7 | - | RINT1 | 7 | - |
| intron-exon | EFCAB14 | 1 | - | EFCAB14-AS1 | 1 | - |
| exon-exon | EFCAB14P1 | 1 | + | EFCAB14 | 1 | - |
| intron-exon | EFCAB6 | 22 | + | POGLUT3 | 11 | - |
| exon-intron | EFEMP2 | 11 | - | MUS81 | 11 | - |
| exon-intron | EFEMP2 | 11 | - | MUS81 | 11 | - |
| exon-exon | EFNA4 | 1 | + | EFNA3 | 1 | + |
| exon-exon | EFTUD2 | 17 | + | CCDC103 | 17 | + |
| exon-exon | EGFLAM | 5 | - | EGFLAM | 5 | + |
| exon-exon | EGLN3 | 14 | - | LOC102724945 | 14 | - |
| exon-exon | EGR1 | 5 | + | MAPK3 | 16 | - |
| exon-exon | EHF | 11 | + | COPZ1 | 12 | - |
| exon-exon | EHF | 11 | + | COPZ1 | 12 | - |
| exon-exon | EHMT2 | 6 | + | LOC107986588 | 6 | + |
| exon-exon | EHMT2 | 6 | + | LOC107986588 | 6 | + |
| exon-exon | EHMT2 | 6 | + | LOC107986588 | 6 | + |
| exon-exon | EHMT2 | 6 | + | LOC107986588 | 6 | + |
| exon-exon | EHMT2 | 6 | + | C2 | 6 | + |
| exon-intron | EIF1 | 17 | + | DOP1B | 21 | - |
| exon-exon | EIF1 | 17 | - | RPL3P4 | 14 | - |
| exon-exon | EIF1AX | X | - | EIF1AX | X | + |
| intron-exon | EIF2A | 3 | + | SELENOT | 3 | + |
| exon-exon | EIF2AK1 | 7 | - | AIMP2 | 7 | - |
| exon-exon | EIF2AK1 | 7 | - | AIMP2 | 7 | - |
| exon-exon | EIF2AK1 | 7 | - | AIMP2 | 7 | - |
| exon-exon | EIF2AK1 | 7 | - | AIMP2 | 7 | - |
| exon-exon | EIF2AK1 | 7 | - | AIMP2 | 7 | - |
| exon-exon | EIF2AK1 | 7 | - | AIMP2 | 7 | - |
| exon-exon | EIF2AK1 | 7 | - | AIMP2 | 7 | - |
| exon-exon | EIF2AK1 | 7 | - | AIMP2 | 7 | - |
| exon-intron | EIF2S2 | 20 | - | DENND1C | 19 | - |
| exon-intron | EIF2S2 | 20 | - | THRA | 17 | - |
| exon-exon | EIF3A | 10 | - | SFXN4 | 10 | - |
| exon-exon | EIF3C | 16 | + | NPIPB9 | 16 | + |
| intron-exon | EIF3C | 16 | - | SULT1A1 | 16 | - |
| exon-exon | EIF3CL | 16 | - | SETD3 | 14 | - |
| exon-exon | EIF3D | 22 | - | S100A2 | 1 | - |
| exon-intron | EIF3E | 8 | + | GRB14 | 2 | - |
| exon-intron | EIF3EP3 | 2 | + | GRB14 | 2 | - |
| exon-exon | EIF3H | 8 | - | EIF3H | 8 | + |
| exon-intron | EIF3I | 1 | + | SLC27A4 | 9 | - |
| exon-intron | EIF3I | 1 | + | RGPD8 | 2 | + |
| exon-intron | EIF3I | 1 | - | KHDRBS1 | 1 | - |
| intron-exon | EIF3J | 15 | + | SPG11 | 15 | + |
| exon-intron | EIF3K | 19 | + | KIAA1671 | 22 | - |
| exon-intron | EIF3K | 19 | + | ZNF331 | 19 | - |
| exon-intron | EIF3K | 19 | + | ZNF536 | 19 | - |
| exon-exon | EIF3M | 11 | + | CCDC73 | 11 | + |
| intron-exon | EIF4E | 4 | - | BEX4 | X | + |
| exon-exon | EIF4E2 | 2 | - | TIGD1 | 2 | - |
| exon-exon | EIF4EBP2 | 10 | + | EIF4EBP2 | 10 | - |
| intron-exon | EIF4ENIF1 | 22 | + | SFI1 | 22 | + |
| exon-exon | EIF4G1 | 3 | + | TPM2 | 9 | - |
| exon-exon | EIF4G1 | 3 | - | EIF4G1 | 3 | + |
| exon-intron | EIF4G2 | 11 | - | PRDM10 | 11 | + |
| exon-exon | EIF4HP1 | 7 | + | EIF4HP1 | 7 | - |
| exon-exon | EIF4HP1 | 7 | - | EIF4H | 7 | + |
| exon-exon | EIF5A2 | 3 | - | RAD23B | 9 | + |
| exon-intron | EIF5B | 2 | + | REV1 | 2 | + |
| intron-exon | EIF5B | 2 | - | TXNDC9 | 2 | - |
| intron-exon | EIF5B | 2 | - | TXNDC9 | 2 | - |
| intron-exon | EIF5B | 2 | - | TXNDC9 | 2 | - |
| exon-exon | EIF5B | 2 | - | EIF5B | 2 | + |
| exon-intron | EIF6 | 20 | - | MMP24-AS1-EDEM2 | 20 | - |
| exon-exon | ELAC1 | 18 | + | SMAD4 | 18 | + |
| exon-exon | ELAC1 | 18 | + | SMAD4 | 18 | + |
| exon-intron | ELAVL3 | 19 | + | FGF12 | 3 | + |
| exon-intron | ELF2 | 4 | - | NOCT | 4 | - |
| exon-exon | ELF3-AS1 | 1 | + | ELF3 | 1 | + |
| intron-exon | ELF3-AS1 | 1 | - | RNPEP | 1 | - |
| intron-exon | ELF3-AS1 | 1 | - | RNPEP | 1 | - |
| intron-exon | ELF3-AS1 | 1 | - | RNPEP | 1 | - |
| exon-intron | ELFN1-AS1 | 7 | - | ELFN1 | 7 | - |
| exon-exon | ELK2AP | 14 | - | IGHGP | 14 | - |
| exon-exon | ELK2AP | 14 | - | IGHGP | 14 | - |
| exon-exon | ELK2AP | 14 | - | IGHGP | 14 | - |
| exon-exon | ELL2 | 5 | - | ELL2 | 5 | + |
| exon-exon | ELL3 | 15 | - | PDIA3 | 15 | - |
| exon-intron | ELMO1 | 7 | + | ELMO1-AS1 | 7 | + |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-intron | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-intron | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-intron | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-intron | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELMOD3 | 2 | - | RETSAT | 2 | - |
| exon-exon | ELOA | 1 | - | RPL11 | 1 | - |
| intron-exon | ELOA | 1 | - | RNF149 | 2 | - |
| intron-exon | ELOA | 1 | - | MAU2 | 19 | - |
| intron-exon | ELOVL2-AS1 | 6 | - | ELOVL2 | 6 | - |
| intron-exon | ELOVL2-AS1 | 6 | - | ELOVL2 | 6 | - |
| intron-exon | ELOVL2-AS1 | 6 | - | ELOVL2 | 6 | - |
| intron-exon | ELOVL2-AS1 | 6 | - | ELOVL2 | 6 | - |
| intron-exon | ELOVL2-AS1 | 6 | - | ELOVL2 | 6 | - |
| exon-intron | ELP4 | 11 | + | PAX6 | 11 | + |
| exon-intron | ELP4 | 11 | + | PAX6 | 11 | + |
| exon-intron | ELP4 | 11 | + | PAX6 | 11 | + |
| exon-exon | ELP5 | 17 | - | CTDNEP1 | 17 | - |
| exon-exon | ELP5 | 17 | - | CTDNEP1 | 17 | - |
| exon-exon | EMC1 | 1 | - | KNTC1 | 12 | + |
| intron-exon | EMC1 | 1 | - | UBR4 | 1 | - |
| exon-exon | EMC8 | 16 | + | COX4I1 | 16 | + |
| intron-exon | EMCN | 4 | + | NKTR | 3 | + |
| exon-exon | EMD | X | + | TAF8 | 6 | + |
| exon-exon | EMG1 | 12 | + | C1S | 12 | + |
| exon-intron | EMILIN1 | 2 | - | RASA2 | 3 | + |
| exon-exon | EML3 | 11 | + | DGKA | 12 | - |
| exon-exon | EML4 | 2 | + | ALK | 2 | - |
| exon-exon | EML4 | 2 | + | ALK | 2 | - |
| exon-exon | EML4 | 2 | + | ALK | 2 | - |
| intron-exon | EML4 | 2 | + | COX7A2L | 2 | + |
| exon-exon | EML4 | 2 | + | ALK | 2 | - |
| exon-exon | EMP2 | 16 | + | EMP2 | 16 | - |
| exon-exon | EMP2 | 16 | + | EMP2 | 16 | - |
| intron-exon | EMP2 | 16 | + | EMP2 | 16 | - |
| intron-exon | ENAH | 1 | - | MIEF1 | 22 | + |
| exon-exon | ENC1 | 5 | - | LRBA | 4 | - |
| exon-exon | ENDOG | 9 | + | SPOUT1 | 9 | + |
| exon-exon | ENG | 9 | + | LOC102723566 | 9 | + |
| exon-exon | ENG | 9 | + | LOC102723566 | 9 | + |
| exon-intron | ENG | 9 | - | LINC01446 | 7 | - |
| intron-exon | ENO1-AS1 | 1 | - | ENO1 | 1 | - |
| intron-exon | ENO1-AS1 | 1 | - | ENO1 | 1 | - |
| exon-exon | ENOPH1 | 4 | - | HNRNPDL | 4 | - |
| exon-exon | ENOSF1 | 18 | - | TYMS | 18 | - |
| exon-exon | ENOSF1 | 18 | - | TYMS | 18 | - |
| exon-exon | ENOSF1 | 18 | - | TYMS | 18 | - |
| exon-exon | ENOSF1 | 18 | - | TYMS | 18 | - |
| exon-exon | ENOSF1 | 18 | - | TYMS | 18 | - |
| exon-exon | ENOSF1 | 18 | - | TYMS | 18 | - |
| exon-exon | ENOSF1 | 18 | - | TYMS | 18 | - |
| exon-exon | ENOSF1 | 18 | - | TYMS | 18 | - |
| exon-exon | ENOSF1 | 18 | - | TYMS | 18 | - |
| exon-exon | ENOSF1 | 18 | - | TYMS | 18 | - |
| exon-exon | ENOSF1 | 18 | - | TYMS | 18 | - |
| exon-exon | ENOSF1 | 18 | - | TYMS | 18 | - |
| exon-intron | ENSA | 1 | + | LINC02301 | 14 | + |
| exon-intron | ENSA | 1 | - | SHISA9 | 16 | + |
| intron-exon | ENTPD3-AS1 | 3 | + | ENTPD3 | 3 | + |
| intron-exon | ENTPD4 | 8 | - | LOXL2 | 8 | - |
| exon-intron | ENTPD5 | 14 | - | COQ6 | 14 | - |
| exon-exon | ENY2 | 8 | + | UPF2 | 10 | - |
| exon-exon | EOLA1 | X | - | LINC00893 | X | - |
| exon-exon | EOLA1 | X | - | LINC00893 | X | - |
| exon-exon | EOLA1 | X | - | LINC00893 | X | - |
| intron-exon | EOLA1 | X | - | LINC00893 | X | - |
| intron-exon | EOLA1 | X | - | LINC00893 | X | - |
| intron-exon | EOLA1 | X | - | LINC00893 | X | - |
| intron-exon | EOLA1 | X | - | LINC00893 | X | - |
| intron-exon | EOLA1 | X | - | LINC00893 | X | - |
| intron-exon | EOLA1 | X | - | LINC00893 | X | - |
| intron-exon | EOLA1 | X | - | LINC00893 | X | - |
| intron-exon | EOLA1 | X | - | LINC00893 | X | - |
| intron-exon | EOLA1 | X | - | LINC00893 | X | - |
| intron-exon | EOLA1 | X | - | LINC00893 | X | - |
| intron-exon | EOLA1 | X | - | LINC00893 | X | - |
| intron-exon | EOLA1 | X | - | LINC00893 | X | - |
| intron-exon | EOLA1 | X | - | LINC00893 | X | - |
| intron-exon | EOLA1 | X | - | LINC00893 | X | - |
| intron-exon | EOLA1 | X | - | LINC00893 | X | - |
| intron-exon | EOLA1 | X | - | LINC00893 | X | - |
| intron-exon | EOLA1 | X | - | LINC00893 | X | - |
| intron-exon | EOLA1 | X | - | LINC00893 | X | - |
| exon-exon | EP300 | 22 | + | ZNF384 | 12 | - |
| exon-intron | EPB41L4A | 5 | + | LOC101927023 | 5 | + |
| exon-exon | EPB42 | 15 | - | CCNDBP1 | 15 | - |
| exon-intron | EPCAM | 2 | + | TENM3 | 4 | + |
| exon-intron | EPCAM | 2 | + | XRCC6 | 22 | + |
| intron-exon | EPCAM-DT | 2 | - | NOL9 | 1 | - |
| exon-intron | EPCAM-DT | 2 | - | MSH2 | 2 | - |
| exon-intron | EPCAM-DT | 2 | - | CALM2 | 2 | - |
| intron-exon | EPG5 | 18 | + | SIGLEC15 | 18 | + |
| exon-exon | EPHA1 | 7 | - | ZYX | 7 | - |
| exon-exon | EPHA1 | 7 | - | ZYX | 7 | - |
| exon-exon | EPHA1 | 7 | - | ZYX | 7 | - |
| exon-intron | EPHA1 | 7 | - | ZYX | 7 | - |
| exon-exon | EPHA1 | 7 | - | ZYX | 7 | - |
| intron-exon | EPHA1-AS1 | 7 | - | EPHA1 | 7 | - |
| intron-exon | EPHA5 | 4 | + | RPL6P10 | 4 | + |
| exon-exon | EPHB6 | 7 | - | YLPM1 | 14 | - |
| exon-exon | EPHX1 | 1 | - | SRP9 | 1 | - |
| exon-exon | EPHX1 | 1 | - | LEFTY3 | 1 | - |
| exon-exon | EPHX1 | 1 | - | SRP9 | 1 | - |
| exon-exon | EPHX1 | 1 | - | LEFTY3 | 1 | - |
| exon-intron | EPN1 | 19 | + | NLRP9 | 19 | + |
| exon-exon | EPN3 | 17 | + | SPATA20 | 17 | + |
| exon-intron | EPPIN | 20 | - | WFDC6 | 20 | - |
| exon-intron | EPPIN | 20 | - | WFDC6 | 20 | - |
| exon-exon | EPPIN | 20 | - | WFDC6 | 20 | - |
| exon-intron | EPPIN | 20 | - | WFDC6 | 20 | - |
| exon-intron | EPPIN | 20 | - | WFDC6 | 20 | - |
| exon-intron | EPPIN | 20 | - | WFDC6 | 20 | - |
| intron-exon | EPPIN | 20 | - | WFDC6 | 20 | - |
| intron-exon | EPPIN | 20 | - | WFDC6 | 20 | - |
| intron-exon | EPPIN | 20 | - | WFDC6 | 20 | - |
| intron-exon | EPPIN-WFDC6 | 20 | - | WFDC6 | 20 | - |
| intron-exon | EPPIN-WFDC6 | 20 | - | WFDC6 | 20 | - |
| exon-intron | EPS15-AS1 | 1 | + | LOC105378719 | 1 | + |
| intron-exon | EPS15-AS1 | 1 | - | EPS15 | 1 | - |
| intron-exon | EPS15-AS1 | 1 | - | EPS15 | 1 | - |
| intron-exon | EPS15-AS1 | 1 | - | EPS15 | 1 | - |
| intron-exon | EPS8L2 | 11 | - | DEAF1 | 11 | - |
| intron-exon | EPSTI1 | 13 | + | LOC105370178 | 13 | + |
| exon-exon | ERAL1 | 17 | - | FAM222B | 17 | - |
| exon-exon | ERAL1 | 17 | - | FAM222B | 17 | - |
| exon-exon | ERAP1 | 5 | + | LOC102724748 | 5 | + |
| intron-exon | ERAP1 | 5 | - | CAST | 5 | - |
| intron-exon | ERAP1 | 5 | - | CAST | 5 | - |
| intron-exon | ERAP1 | 5 | - | CAST | 5 | - |
| intron-exon | ERAP1 | 5 | - | CAST | 5 | - |
| intron-exon | ERAP1 | 5 | - | CAST | 5 | - |
| exon-intron | ERAP2 | 5 | + | LOC107985960 | 2 | + |
| intron-exon | ERBB2 | 17 | - | PGAP3 | 17 | - |
| exon-exon | ERBB3 | 12 | + | LOC105369782 | 12 | - |
| exon-exon | ERBB3 | 12 | + | ERBB3 | 12 | - |
| intron-exon | ERC1 | 12 | - | ND4 | MT | + |
| exon-exon | ERCC1 | 19 | - | COPS2 | 15 | - |
| exon-exon | ERCC2 | 19 | - | KLC3 | 19 | - |
| exon-exon | ERGIC1 | 5 | - | ERGIC1 | 5 | + |
| exon-exon | ERI1 | 8 | - | RPP14 | 3 | - |
| exon-exon | ERI1 | 8 | - | RPP14 | 3 | - |
| intron-exon | ERI2 | 16 | - | ACSM3 | 16 | - |
| exon-exon | ERICH6 | 3 | + | ERICH6-AS1 | 3 | + |
| exon-intron | ERMAP | 1 | + | AL512353.1 | 1 | + |
| intron-exon | ERMAP | 1 | - | SVBP | 1 | - |
| exon-exon | ERMN | 2 | - | SEPTIN8 | 5 | - |
| exon-intron | ERMP1 | 9 | - | RIC1 | 9 | - |
| exon-exon | ERN1 | 17 | + | TBXA2R | 19 | - |
| exon-exon | ERO1A | 14 | + | STC1 | 8 | - |
| exon-intron | ERO1A | 14 | + | KCNN4 | 19 | - |
| exon-intron | ERO1A | 14 | + | STYX | 14 | + |
| intron-exon | ERO1A | 14 | + | GNPNAT1 | 14 | + |
| exon-intron | ERO1A | 14 | - | TXNDC16 | 14 | - |
| exon-exon | ERO1B | 1 | - | GPR137B | 1 | - |
| exon-intron | ERP44 | 9 | + | LOC105376176 | 9 | + |
| exon-intron | ERP44 | 9 | + | LOC105376176 | 9 | + |
| exon-intron | ERV3-1-ZNF117 | 7 | - | ZNF117 | 7 | - |
| exon-intron | ERV3-1-ZNF117 | 7 | - | ZNF117 | 7 | - |
| exon-intron | ERV3-1-ZNF117 | 7 | - | ZNF117 | 7 | - |
| exon-intron | ESCO2 | 8 | + | AC021678.2 | 8 | + |
| intron-exon | ESCO2 | 8 | - | CCDC25 | 8 | - |
| intron-exon | ESCO2 | 8 | - | CCDC25 | 8 | - |
| intron-exon | ESCO2 | 8 | - | CCDC25 | 8 | - |
| intron-exon | ESCO2 | 8 | - | CCDC25 | 8 | - |
| intron-exon | ESCO2 | 8 | - | CCDC25 | 8 | - |
| intron-exon | ESCO2 | 8 | - | CCDC25 | 8 | - |
| intron-exon | ESCO2 | 8 | - | CCDC25 | 8 | - |
| intron-exon | ESCO2 | 8 | - | CCDC25 | 8 | - |
| intron-exon | ESCO2 | 8 | - | CCDC25 | 8 | - |
| intron-exon | ESCO2 | 8 | - | CCDC25 | 8 | - |
| intron-exon | ESCO2 | 8 | - | CCDC25 | 8 | - |
| intron-exon | ESCO2 | 8 | - | CCDC25 | 8 | - |
| exon-exon | ESRP2 | 16 | - | NFATC3 | 16 | - |
| exon-exon | ESRP2 | 16 | - | NFATC3 | 16 | - |
| intron-exon | ESRRA | 11 | + | TRMT112 | 11 | + |
| intron-exon | ESRRA | 11 | + | TRMT112 | 11 | + |
| exon-exon | ESYT1 | 12 | - | ZC3H10 | 12 | - |
| exon-exon | ESYT1 | 12 | - | ZC3H10 | 12 | - |
| exon-exon | ETFB | 19 | + | CLDND2 | 19 | + |
| exon-exon | ETFDH | 4 | - | C4orf46 | 4 | - |
| exon-exon | ETFDH | 4 | - | C4orf46 | 4 | - |
| exon-exon | ETFDH | 4 | - | C4orf46 | 4 | - |
| exon-exon | ETFRF1 | 12 | + | KRAS | 12 | + |
| exon-exon | ETHE1 | 19 | + | ZNF575 | 19 | + |
| exon-intron | ETS2 | 21 | + | VPS13B | 8 | - |
| intron-exon | ETV4 | 17 | - | DHX8 | 17 | - |
| intron-exon | ETV4 | 17 | - | DHX8 | 17 | - |
| intron-exon | ETV4 | 17 | - | DHX8 | 17 | - |
| intron-exon | ETV4 | 17 | - | DHX8 | 17 | - |
| intron-exon | ETV4 | 17 | - | DHX8 | 17 | - |
| intron-exon | ETV4 | 17 | - | DHX8 | 17 | - |
| exon-exon | ETV6 | 12 | + | NTRK3 | 15 | - |
| exon-exon | ETV6 | 12 | + | RUNX1 | 21 | - |
| intron-exon | ETV7-AS1 | 6 | - | ETV7 | 6 | - |
| exon-exon | EVC | 4 | + | CRMP1 | 4 | + |
| exon-exon | EVI2A | 17 | - | EVI2B | 17 | - |
| exon-exon | EVI2A | 17 | - | EVI2B | 17 | - |
| exon-exon | EVI2A | 17 | - | EVI2B | 17 | - |
| exon-exon | EVI2A | 17 | - | EVI2B | 17 | - |
| exon-exon | EVI2A | 17 | - | EVI2B | 17 | - |
| exon-exon | EVL | 14 | - | COL4A5 | X | - |
| exon-exon | EWSR1 | 22 | + | FLI1 | 11 | + |
| exon-exon | EWSR1 | 22 | + | NFATC2 | 20 | - |
| exon-intron | EXO5 | 1 | + | LOC112577599 | 1 | + |
| exon-intron | EXO5 | 1 | + | LOC112577599 | 1 | + |
| exon-intron | EXO5 | 1 | + | ZNF684 | 1 | + |
| exon-intron | EXOC1 | 4 | + | AKAP8L | 19 | + |
| exon-exon | EXOC3 | 5 | + | SLC9A3 | 5 | + |
| intron-exon | EXOC3L2 | 19 | - | BLOC1S3 | 19 | - |
| exon-exon | EXOC7 | 17 | - | MTDH | 8 | + |
| exon-exon | EXOSC10-AS1 | 1 | - | EXOSC10 | 1 | - |
| exon-exon | EXOSC10-AS1 | 1 | - | EXOSC10 | 1 | - |
| exon-exon | EXOSC10-AS1 | 1 | - | EXOSC10 | 1 | - |
| exon-exon | EXOSC10-AS1 | 1 | - | EXOSC10 | 1 | - |
| exon-exon | EXOSC10-AS1 | 1 | - | EXOSC10 | 1 | - |
| exon-exon | EXOSC10-AS1 | 1 | - | EXOSC10 | 1 | - |
| exon-exon | EXOSC10-AS1 | 1 | - | EXOSC10 | 1 | - |
| exon-intron | EXOSC10-AS1 | 1 | - | EXOSC10 | 1 | - |
| intron-exon | EXOSC10-AS1 | 1 | - | EXOSC10 | 1 | - |
| exon-exon | EXOSC2 | 9 | + | EXOSC2 | 9 | - |
| exon-exon | EXOSC6 | 16 | - | ENO1 | 1 | - |
| intron-exon | EXOSC7 | 3 | - | ZDHHC3 | 3 | - |
| exon-intron | EXPH5 | 11 | - | TMEM189-UBE2V1 | 20 | - |
| intron-exon | EXT2 | 11 | - | HSD17B12 | 11 | - |
| exon-exon | EYA4 | 6 | + | TARID | 6 | + |
| exon-exon | EYA4 | 6 | + | TARID | 6 | + |
| intron-exon | EYA4 | 6 | - | NCL | 2 | + |
| intron-exon | EYS | 6 | + | SCAT8 | 6 | + |
| intron-exon | EYS | 6 | + | LOC107986608 | 6 | + |
| exon-intron | EZH1 | 17 | - | STAT3 | 17 | + |
| exon-intron | EZR | 6 | - | NBAS | 2 | - |
| exon-exon | EZR | 6 | - | FADS2 | 11 | + |
| exon-exon | EZR | 6 | - | ROS1 | 6 | - |
| intron-exon | EZR-AS1 | 6 | - | EZR | 6 | - |
| intron-exon | EZR-AS1 | 6 | - | EZR | 6 | - |
| intron-exon | EZR-AS1 | 6 | - | EZR | 6 | - |
| intron-exon | EZR-AS1 | 6 | - | EZR | 6 | - |
| intron-exon | EZR-AS1 | 6 | - | EZR | 6 | - |
| intron-exon | EZR-AS1 | 6 | - | EZR | 6 | - |
| intron-exon | EZR-AS1 | 6 | - | EZR | 6 | - |
| intron-exon | EZR-AS1 | 6 | - | EZR | 6 | - |
| intron-exon | EZR-AS1 | 6 | - | EZR | 6 | - |
| intron-exon | EZR-AS1 | 6 | - | EZR | 6 | - |
| intron-exon | EZR-AS1 | 6 | - | EZR | 6 | - |
| intron-exon | EZR-AS1 | 6 | - | EZR | 6 | - |
| intron-exon | EZR-AS1 | 6 | - | EZR | 6 | - |
| intron-exon | EZR-AS1 | 6 | - | EZR | 6 | - |
| intron-exon | EZR-AS1 | 6 | - | EZR | 6 | - |
| intron-exon | EZR-AS1 | 6 | - | EZR | 6 | - |
| intron-exon | EZR-AS1 | 6 | - | EZR | 6 | - |
| intron-exon | EZR-AS1 | 6 | - | EZR | 6 | - |
| intron-exon | EZR-AS1 | 6 | - | EZR | 6 | - |
| intron-exon | EZR-AS1 | 6 | - | EZR | 6 | - |
| intron-exon | EZR-AS1 | 6 | - | EZR | 6 | - |
| intron-exon | EZR-AS1 | 6 | - | EZR | 6 | - |
| intron-exon | EZR-AS1 | 6 | - | EZR | 6 | - |
| intron-exon | EZR-AS1 | 6 | - | EZR | 6 | - |
| intron-exon | EZR-AS1 | 6 | - | EZR | 6 | - |
| intron-exon | EZR-AS1 | 6 | - | EZR | 6 | - |
| intron-exon | EZR-AS1 | 6 | - | EZR | 6 | - |
| intron-exon | EZR-AS1 | 6 | - | EZR | 6 | - |
| intron-exon | EZR-AS1 | 6 | - | EZR | 6 | - |
| intron-exon | EZR-AS1 | 6 | - | EZR | 6 | - |
| intron-exon | EZR-AS1 | 6 | - | EZR | 6 | - |
| intron-exon | EZR-AS1 | 6 | - | EZR | 6 | - |
| intron-exon | EZR-AS1 | 6 | - | EZR | 6 | - |
| intron-exon | EZR-AS1 | 6 | - | EZR | 6 | - |
| intron-exon | EZR-AS1 | 6 | - | EZR | 6 | - |
| intron-exon | EZR-AS1 | 6 | - | EZR | 6 | - |
| exon-exon | F11R | 1 | - | GOLGB1 | 3 | - |
| exon-exon | FAAH | 1 | - | NSUN4 | 1 | - |
| exon-intron | FAAP20 | 1 | + | FAAP20 | 1 | - |
| exon-intron | FAAP20 | 1 | - | PRKCZ | 1 | - |
| exon-exon | FAAP20 | 1 | - | PRKCZ | 1 | - |
| exon-exon | FAAP20 | 1 | - | PRKCZ | 1 | - |
| exon-exon | FAAP20 | 1 | - | PRKCZ | 1 | - |
| exon-exon | FAAP20 | 1 | - | PRKCZ | 1 | - |
| exon-exon | FAAP20 | 1 | - | PRKCZ | 1 | - |
| exon-exon | FAAP20 | 1 | - | PRKCZ | 1 | - |
| exon-exon | FAAP20 | 1 | - | PRKCZ | 1 | - |
| exon-exon | FAAP20 | 1 | - | PRKCZ | 1 | - |
| exon-exon | FAAP20 | 1 | - | PRKCZ | 1 | - |
| exon-exon | FAAP20 | 1 | - | PRKCZ | 1 | - |
| exon-exon | FAAP20 | 1 | - | PRKCZ | 1 | - |
| exon-exon | FAAP20 | 1 | - | PRKCZ | 1 | - |
| exon-exon | FAAP20 | 1 | - | PRKCZ | 1 | - |
| exon-exon | FAAP20 | 1 | - | PRKCZ | 1 | - |
| exon-exon | FAAP20 | 1 | - | PRKCZ | 1 | - |
| exon-exon | FAAP20 | 1 | - | PRKCZ | 1 | - |
| exon-exon | FAAP20 | 1 | - | PRKCZ | 1 | - |
| exon-exon | FAAP20 | 1 | - | PRKCZ | 1 | - |
| exon-exon | FAAP20 | 1 | - | PRKCZ | 1 | - |
| exon-exon | FAAP20 | 1 | - | PRKCZ | 1 | - |
| exon-exon | FAAP20 | 1 | - | PRKCZ | 1 | - |
| exon-exon | FAAP20 | 1 | - | PRKCZ | 1 | - |
| exon-exon | FAAP20 | 1 | - | PRKCZ | 1 | - |
| exon-exon | FAAP20 | 1 | - | PRKCZ | 1 | - |
| exon-exon | FAAP20 | 1 | - | PRKCZ | 1 | - |
| exon-exon | FAAP20 | 1 | - | PRKCZ | 1 | - |
| exon-exon | FAAP20 | 1 | - | PRKCZ | 1 | - |
| exon-intron | FAAP20 | 1 | - | ADGRE5 | 19 | + |
| exon-intron | FAAP24 | 19 | + | RHPN2 | 19 | + |
| exon-intron | FAAP24 | 19 | + | FBF1 | 17 | - |
| exon-intron | FABP1 | 2 | - | GPATCH1 | 19 | - |
| intron-exon | FABP3 | 1 | - | ZCCHC17 | 1 | - |
| intron-exon | FABP3 | 1 | - | ZCCHC17 | 1 | - |
| intron-exon | FABP3 | 1 | - | ZCCHC17 | 1 | - |
| intron-exon | FABP3 | 1 | - | ZCCHC17 | 1 | - |
| exon-intron | FABP4 | 8 | - | LOC101927118 | 8 | - |
| exon-intron | FABP5P7 | 11 | - | STX3 | 11 | - |
| exon-exon | FADS1 | 11 | + | FADS2 | 11 | + |
| intron-exon | FADS2 | 11 | - | FADS1 | 11 | - |
| intron-exon | FADS2 | 11 | - | FADS1 | 11 | - |
| exon-exon | FAHD2B | 2 | + | GPAT2P2 | 2 | + |
| exon-intron | FAM102A | 9 | - | AL157935.1 | 9 | - |
| exon-intron | FAM102A | 9 | - | AL157935.1 | 9 | - |
| exon-intron | FAM102A | 9 | - | AL157935.1 | 9 | - |
| exon-intron | FAM102A | 9 | - | AL157935.1 | 9 | - |
| exon-intron | FAM102A | 9 | - | AL157935.1 | 9 | - |
| exon-exon | FAM104A | 17 | - | COG1 | 17 | - |
| exon-exon | FAM104A | 17 | - | COG1 | 17 | - |
| exon-exon | FAM104A | 17 | - | COG1 | 17 | - |
| exon-exon | FAM104A | 17 | - | COG1 | 17 | - |
| exon-exon | FAM104A | 17 | - | COG1 | 17 | - |
| exon-exon | FAM104A | 17 | - | COG1 | 17 | - |
| intron-exon | FAM106A | 17 | - | USP32P2 | 17 | - |
| intron-exon | FAM107A | 3 | + | FAM3D-AS1 | 3 | + |
| exon-intron | FAM110B | 8 | + | LOC107986945 | 8 | + |
| exon-intron | FAM110B | 8 | + | LOC107986945 | 8 | + |
| exon-exon | FAM110C | 2 | + | DTX2 | 7 | - |
| exon-exon | FAM120B | 6 | - | UBA1 | X | + |
| exon-exon | FAM126A | 7 | - | LOC107986776 | 7 | - |
| intron-exon | FAM126B | 2 | + | CFLAR | 2 | + |
| intron-exon | FAM126B | 2 | + | NDUFB3 | 2 | + |
| intron-exon | FAM126B | 2 | - | HNRNPA1P10 | 19 | + |
| exon-intron | FAM131C | 1 | - | LOC440568 | 1 | - |
| intron-exon | FAM131C | 1 | - | LOC440568 | 1 | - |
| intron-exon | FAM135A-AS1 | 6 | + | FAM135A | 6 | + |
| exon-intron | FAM13A | 4 | + | LOC105377327 | 4 | + |
| exon-exon | FAM13B | 5 | + | LOC100130172 | 5 | + |
| exon-intron | FAM13C | 10 | + | LOC102724778 | 10 | + |
| exon-exon | FAM13C | 10 | - | PHYHIPL | 10 | - |
| exon-exon | FAM153A | 5 | - | LOC107986489 | 5 | - |
| intron-exon | FAM153CP | 5 | - | SENP2 | 3 | - |
| exon-intron | FAM161A | 2 | + | LINC01606 | 8 | - |
| exon-exon | FAM162A | 3 | - | FTH1 | 11 | + |
| exon-exon | FAM166A | 9 | - | TUBB4B | 9 | - |
| exon-exon | FAM166A | 9 | - | TUBB4B | 9 | - |
| exon-exon | FAM166A | 9 | - | TUBB4B | 9 | - |
| exon-exon | FAM166A | 9 | - | TUBB2B | 6 | + |
| intron-exon | FAM171A1 | 10 | + | LOC105376433 | 10 | + |
| intron-exon | FAM172A | 5 | + | EXOC3 | 5 | + |
| intron-exon | FAM174B | 15 | - | HEXIM1 | 17 | - |
| exon-exon | FAM178B | 2 | - | PRRG1 | X | + |
| exon-intron | FAM180A | 7 | - | SLC13A4 | 7 | - |
| exon-exon | FAM182A | 20 | + | FAM182B | 20 | - |
| exon-exon | FAM182A | 20 | + | FAM182B | 20 | - |
| exon-exon | FAM182A | 20 | - | LOC100134868 | 20 | - |
| exon-exon | FAM185A | 7 | + | LRRC17 | 7 | + |
| intron-exon | FAM186A | 12 | + | LARP4 | 12 | + |
| exon-intron | FAM193B | 5 | + | LOC107986488 | 5 | + |
| exon-intron | FAM193B | 5 | + | LOC107986488 | 5 | + |
| exon-intron | FAM193B | 5 | + | LOC107986488 | 5 | + |
| intron-exon | FAM200B | 4 | - | FBXL5 | 4 | - |
| intron-exon | FAM200B | 4 | - | FBXL5 | 4 | - |
| intron-exon | FAM200B | 4 | - | FBXL5 | 4 | - |
| intron-exon | FAM200B | 4 | - | FBXL5 | 4 | - |
| exon-exon | FAM200B | 4 | - | FBXL5 | 4 | - |
| intron-exon | FAM207A | 21 | - | LINC01547 | 21 | - |
| intron-exon | FAM207A | 21 | - | LINC01547 | 21 | - |
| intron-exon | FAM207A | 21 | - | LINC01547 | 21 | - |
| exon-exon | FAM20A | 17 | - | PRKAR1A | 17 | - |
| exon-exon | FAM20A | 17 | - | PRKAR1A | 17 | - |
| exon-exon | FAM20A | 17 | - | PRKAR1A | 17 | - |
| exon-exon | FAM20A | 17 | - | PRKAR1A | 17 | - |
| exon-exon | FAM20A | 17 | - | PRKAR1A | 17 | - |
| exon-exon | FAM20A | 17 | - | PRKAR1A | 17 | - |
| exon-exon | FAM20A | 17 | - | PRKAR1A | 17 | - |
| exon-exon | FAM20A | 17 | - | PRKAR1A | 17 | - |
| exon-exon | FAM20A | 17 | - | PRKAR1A | 17 | - |
| exon-exon | FAM20A | 17 | - | PRKAR1A | 17 | - |
| exon-exon | FAM20A | 17 | - | PRKAR1A | 17 | - |
| exon-exon | FAM20A | 17 | - | PRKAR1A | 17 | - |
| intron-exon | FAM214A | 15 | + | LOC105370821 | 15 | + |
| exon-intron | FAM214A | 15 | - | LOC102723714 | 15 | - |
| exon-exon | FAM214B | 9 | - | FAM214B | 9 | + |
| intron-exon | FAM216A | 12 | - | KLHL5 | 4 | + |
| exon-exon | FAM222B | 17 | + | FAM222B | 17 | - |
| intron-exon | FAM227B | 15 | + | FGF7 | 15 | + |
| exon-exon | FAM227B | 15 | - | GALK2 | 15 | - |
| exon-exon | FAM227B | 15 | - | GALK2 | 15 | - |
| exon-exon | FAM227B | 15 | - | GALK2 | 15 | - |
| exon-exon | FAM227B | 15 | - | GALK2 | 15 | - |
| intron-exon | FAM227B | 15 | - | GALK2 | 15 | - |
| exon-exon | FAM230A | 22 | + | FAM230G | 22 | + |
| exon-intron | FAM230G | 22 | + | USP41 | 22 | + |
| exon-intron | FAM230J | 22 | - | FAM230B | 22 | + |
| exon-exon | FAM230J | 22 | - | FAM230E | 22 | + |
| exon-exon | FAM24B | 10 | - | CUZD1 | 10 | - |
| exon-exon | FAM27B | 9 | - | LOC107987075 | 9 | - |
| exon-exon | FAM47E | 4 | + | FAM47E-STBD1 | 4 | + |
| exon-intron | FAM47E | 4 | + | FAM47E-STBD1 | 4 | + |
| exon-exon | FAM47E | 4 | + | FAM47E-STBD1 | 4 | + |
| intron-exon | FAM47E | 4 | - | SCARB2 | 4 | - |
| exon-exon | FAM50A | X | + | CALHM6 | 6 | + |
| exon-exon | FAM53B | 10 | - | LOC105378539 | 10 | - |
| exon-intron | FAM66B | 8 | + | LOC105379215 | 8 | + |
| exon-exon | FAM66B | 8 | - | FAM90A20P | 8 | - |
| exon-exon | FAM71B | 5 | + | ITK | 5 | + |
| exon-exon | FAM71E1 | 19 | + | EMC10 | 19 | + |
| exon-exon | FAM72A | 1 | + | SRGAP2 | 1 | + |
| intron-exon | FAM72A | 1 | + | SRGAP2B | 1 | - |
| intron-exon | FAM72A | 1 | + | SRGAP2B | 1 | - |
| exon-intron | FAM72A | 1 | - | AC244035.2 | 1 | - |
| intron-exon | FAM72C | 1 | - | HOXB8 | 17 | - |
| intron-exon | FAM76B | 11 | + | CEP57 | 11 | + |
| intron-exon | FAM78B-AS1 | 1 | + | LOC112268276 | 1 | + |
| intron-exon | FAM81A | 15 | + | LIPF | 10 | - |
| exon-intron | FAM83F | 22 | - | ENTHD1 | 22 | - |
| exon-exon | FAM83H-AS1 | 8 | + | IQANK1 | 8 | + |
| intron-exon | FAM83H-AS1 | 8 | + | RNF149 | 2 | - |
| intron-exon | FAM85B | 8 | + | LOC100506990 | 8 | - |
| exon-exon | FAM86GP | 11 | - | ALG1L8P | 11 | - |
| exon-exon | FAM86GP | 11 | - | ALG1L8P | 11 | - |
| exon-exon | FAM86GP | 11 | - | ALG1L8P | 11 | - |
| exon-intron | FAM86JP | 3 | + | TSSC2 | 11 | - |
| exon-exon | FAM86JP | 3 | + | TSSC2 | 11 | - |
| exon-intron | FAM8A1 | 6 | + | NUP153 | 6 | + |
| exon-intron | FAM95B1 | 9 | - | BX664727.3 | 9 | - |
| exon-intron | FAM95B1 | 9 | - | BX664727.3 | 9 | - |
| exon-intron | FAM95B1 | 9 | - | BX664727.3 | 9 | - |
| intron-exon | FAM98C | 19 | - | FAM98C | 19 | + |
| exon-intron | FAN1 | 15 | + | AC064829.1 | Y | + |
| exon-exon | FANCA | 16 | - | ZNF276 | 16 | - |
| exon-exon | FANCA | 16 | - | ZNF276 | 16 | - |
| exon-exon | FANCA | 16 | - | ZNF276 | 16 | - |
| exon-exon | FANCA | 16 | - | ZNF276 | 16 | - |
| exon-exon | FANCA | 16 | - | ZNF276 | 16 | - |
| intron-exon | FANCD2OS | 3 | - | FANCD2 | 3 | - |
| intron-exon | FANCD2OS | 3 | - | FANCD2 | 3 | - |
| exon-exon | FANCI | 15 | + | OLA1 | 2 | - |
| exon-exon | FANCI | 15 | + | OLA1 | 2 | - |
| exon-exon | FANCI | 15 | + | OLA1 | 2 | - |
| exon-exon | FANK1 | 10 | - | DHX32 | 10 | - |
| exon-exon | FANK1 | 10 | - | DHX32 | 10 | - |
| exon-intron | FANK1 | 10 | - | DHX32 | 10 | - |
| exon-exon | FANK1 | 10 | - | DHX32 | 10 | - |
| exon-exon | FANK1 | 10 | - | DHX32 | 10 | - |
| exon-exon | FANK1 | 10 | - | DHX32 | 10 | - |
| exon-exon | FAR2 | 12 | + | ERGIC2 | 12 | + |
| exon-exon | FAR2 | 12 | - | FAR2 | 12 | + |
| exon-exon | FAR2P4 | 2 | + | LOC100420006 | 2 | + |
| exon-intron | FAR2P4 | 2 | + | PLEKHB2 | 2 | + |
| intron-exon | FARS2 | 6 | - | IVD | 15 | + |
| exon-intron | FARSA | 19 | + | FARSA-AS1 | 19 | + |
| intron-exon | FARSA-AS1 | 19 | + | FARSA | 19 | + |
| exon-exon | FASTKD2 | 2 | - | MDH1B | 2 | - |
| intron-exon | FAT1 | 4 | + | EFCAB8 | 20 | + |
| exon-exon | FAU | 11 | + | BAD | 11 | - |
| exon-intron | FAU | 11 | - | EVL | 14 | - |
| exon-intron | FAU | 11 | - | DELEC1 | 9 | + |
| exon-intron | FAU | 11 | - | MRPL49 | 11 | - |
| exon-exon | FAXDC2 | 5 | - | LARP1 | 5 | - |
| exon-exon | FAXDC2 | 5 | - | LARP1 | 5 | - |
| exon-intron | FBF1 | 17 | + | LOC112533673 | 17 | + |
| exon-exon | FBF1 | 17 | - | MRPL38 | 17 | - |
| exon-intron | FBL | 19 | - | ABCG2 | 4 | + |
| exon-intron | FBLIM1 | 1 | - | PPARGC1A | 4 | - |
| exon-intron | FBLN1 | 22 | - | LINC00342 | 2 | + |
| exon-exon | FBN3 | 19 | + | FBN3 | 19 | - |
| intron-exon | FBN3 | 19 | - | RP2 | X | - |
| intron-exon | FBRSL1 | 12 | + | ZNF605 | 12 | + |
| intron-exon | FBXL12 | 19 | + | FAR1 | 11 | - |
| exon-exon | FBXL13 | 7 | + | LRRC17 | 7 | + |
| intron-exon | FBXL13 | 7 | - | POLR2J2 | 7 | - |
| exon-intron | FBXL21P | 5 | + | LECT2 | 5 | + |
| exon-exon | FBXL22 | 15 | - | USP3-AS1 | 15 | - |
| intron-exon | FBXL3 | 13 | - | CLN5 | 13 | - |
| intron-exon | FBXL3 | 13 | - | CLN5 | 13 | - |
| intron-exon | FBXL3 | 13 | - | C20orf27 | 20 | - |
| intron-exon | FBXL6 | 8 | + | SLC52A2 | 8 | + |
| exon-exon | FBXL8 | 16 | - | TRADD | 16 | - |
| intron-exon | FBXO17 | 19 | - | SARS2 | 19 | - |
| intron-exon | FBXO17 | 19 | - | SARS2 | 19 | - |
| exon-intron | FBXO2 | 1 | + | FBXO44 | 1 | + |
| exon-intron | FBXO21 | 12 | - | PDE3A | 12 | - |
| exon-intron | FBXO22 | 15 | + | NRG4 | 15 | + |
| intron-exon | FBXO24 | 7 | - | LRCH4 | 7 | - |
| intron-exon | FBXO24 | 7 | - | LRCH4 | 7 | - |
| intron-exon | FBXO24 | 7 | - | LRCH4 | 7 | - |
| intron-exon | FBXO24 | 7 | - | LRCH4 | 7 | - |
| intron-exon | FBXO24 | 7 | - | LRCH4 | 7 | - |
| intron-exon | FBXO24 | 7 | - | LRCH4 | 7 | - |
| intron-exon | FBXO24 | 7 | - | LRCH4 | 7 | - |
| intron-exon | FBXO24 | 7 | - | LRCH4 | 7 | - |
| intron-exon | FBXO24 | 7 | - | LRCH4 | 7 | - |
| intron-exon | FBXO24 | 7 | - | LRCH4 | 7 | - |
| intron-exon | FBXO24 | 7 | - | LRCH4 | 7 | - |
| intron-exon | FBXO24 | 7 | - | LRCH4 | 7 | - |
| intron-exon | FBXO24 | 7 | - | LRCH4 | 7 | - |
| intron-exon | FBXO24 | 7 | - | LRCH4 | 7 | - |
| intron-exon | FBXO24 | 7 | - | LRCH4 | 7 | - |
| intron-exon | FBXO24 | 7 | - | LRCH4 | 7 | - |
| intron-exon | FBXO24 | 7 | - | LRCH4 | 7 | - |
| exon-exon | FBXO31 | 16 | + | BRD1 | 22 | + |
| exon-exon | FBXO32 | 8 | - | AGGF1 | 5 | + |
| exon-intron | FBXO32 | 8 | - | MYEOV | 11 | + |
| intron-exon | FBXO34 | 14 | - | LOC105370509 | 14 | - |
| intron-exon | FBXO34 | 14 | - | LOC105370509 | 14 | - |
| exon-intron | FBXO39 | 17 | + | LOC111556120 | 17 | + |
| exon-exon | FBXO44 | 1 | - | FBXO2 | 1 | - |
| exon-exon | FBXO44 | 1 | - | FBXO2 | 1 | - |
| intron-exon | FBXO44 | 1 | - | FBXO2 | 1 | - |
| intron-exon | FBXO44 | 1 | - | FBXO2 | 1 | - |
| intron-exon | FBXO44 | 1 | - | FBXO2 | 1 | - |
| intron-exon | FBXO47 | 17 | - | CLP1 | 11 | - |
| exon-exon | FBXO7 | 22 | + | COX3 | MT | + |
| exon-intron | FBXO7 | 22 | + | MTATP6P1 | 1 | + |
| exon-intron | FBXO7 | 22 | + | MTCO3P12 | 1 | + |
| exon-intron | FBXO7 | 22 | + | LINC00571 | 13 | + |
| exon-intron | FBXO8 | 4 | + | CEP44 | 4 | + |
| intron-exon | FBXW11 | 5 | - | RNF115 | 1 | - |
| exon-exon | FBXW9 | 19 | - | GNG14 | 19 | - |
| exon-intron | FCAR | 19 | + | NCR1 | 19 | + |
| exon-exon | FCGR3A | 1 | + | MMP10 | 11 | - |
| exon-exon | FCGR3A | 1 | + | MMP10 | 11 | - |
| exon-exon | FCGR3B | 1 | - | FCGR3A | 1 | - |
| intron-exon | FCGR3B | 1 | - | FCGR3A | 1 | - |
| intron-exon | FCGR3B | 1 | - | FCGR3A | 1 | - |
| exon-exon | FCHO2 | 5 | - | ZNF271P | 18 | + |
| exon-exon | FCHSD1 | 5 | - | RELL2 | 5 | - |
| exon-exon | FCMR | 1 | + | FCMR | 1 | - |
| intron-exon | FCMR | 1 | + | TMEM87A | 15 | - |
| exon-intron | FCRL4 | 1 | - | IGH | 14 | - |
| exon-intron | FDX1 | 11 | - | ITCH | 20 | + |
| intron-exon | FDX2 | 19 | - | ZGLP1 | 19 | - |
| exon-exon | FDXACB1 | 11 | + | C11orf1 | 11 | + |
| exon-exon | FGA | 4 | + | PIK3IP1 | 22 | - |
| exon-intron | FGA | 4 | - | PUDPP1 | Y | + |
| intron-exon | FGF11 | 17 | - | TMEM102 | 17 | - |
| intron-exon | FGF11 | 17 | - | TMEM102 | 17 | - |
| exon-exon | FGF14 | 13 | - | ITGBL1 | 13 | - |
| exon-exon | FGF14 | 13 | - | ITGBL1 | 13 | - |
| exon-exon | FGF14 | 13 | - | ITGBL1 | 13 | - |
| exon-intron | FGF2 | 4 | + | NUDT6 | 4 | + |
| intron-exon | FGF7P3 | 9 | + | ERCC6L2 | 9 | - |
| exon-exon | FGFR1 | 8 | - | BCR | 22 | + |
| exon-exon | FGFR2 | 10 | - | BICC1 | 10 | + |
| exon-exon | FGFR3 | 4 | + | TACC3 | 4 | + |
| exon-intron | FGL1 | 8 | - | ABCA3 | 16 | + |
| exon-intron | FHAD1 | 1 | + | LOC101927441 | 1 | + |
| exon-intron | FHL2 | 2 | - | LOC101927141 | 8 | + |
| exon-exon | FHOD1 | 16 | + | SLC9A5 | 16 | + |
| intron-exon | FHOD1 | 16 | - | DDX11L5 | 9 | + |
| intron-exon | FILIP1 | 6 | + | RBM47 | 4 | - |
| exon-exon | FIP1L1 | 4 | + | PDGFRA | 4 | + |
| exon-exon | FJX1 | 11 | - | WTIP | 19 | + |
| exon-exon | FKBP10 | 17 | - | MEGF11 | 15 | - |
| exon-exon | FKBP15 | 9 | - | MALAT1 | 11 | + |
| exon-exon | FKBP1A | 20 | - | SDCBP2 | 20 | - |
| exon-exon | FKBP1A | 20 | - | SDCBP2 | 20 | - |
| exon-exon | FKBP1A | 20 | - | SDCBP2 | 20 | - |
| exon-exon | FKBP1A | 20 | - | SDCBP2 | 20 | - |
| exon-intron | FKBP1A | 20 | - | SDCBP2 | 20 | - |
| exon-intron | FKBP1A | 20 | - | SDCBP2 | 20 | - |
| exon-intron | FKBP1A | 20 | - | SDCBP2 | 20 | - |
| exon-exon | FKBP1A | 20 | - | SDCBP2 | 20 | - |
| exon-exon | FKBP1A | 20 | - | SDCBP2 | 20 | - |
| exon-intron | FKBP1A | 20 | - | SDCBP2 | 20 | - |
| exon-exon | FKBP1A | 20 | - | SDCBP2 | 20 | - |
| exon-exon | FKBP1A | 20 | - | SDCBP2 | 20 | - |
| exon-exon | FKBP1A-SDCBP2 | 20 | - | FKBP1A-SDCBP2 | 20 | - |
| exon-exon | FKBP1A-SDCBP2 | 20 | - | FKBP1A-SDCBP2 | 20 | - |
| exon-exon | FKBP1A-SDCBP2 | 20 | - | FKBP1A-SDCBP2 | 20 | - |
| exon-exon | FKBP1A-SDCBP2 | 20 | - | FKBP1A-SDCBP2 | 20 | - |
| exon-exon | FKBP1A-SDCBP2 | 20 | - | FKBP1A-SDCBP2 | 20 | - |
| exon-exon | FKBP1A-SDCBP2 | 20 | - | FKBP1A-SDCBP2 | 20 | - |
| exon-exon | FKBP1A-SDCBP2 | 20 | - | FKBP1A-SDCBP2 | 20 | - |
| exon-exon | FKBP1A-SDCBP2 | 20 | - | FKBP1A-SDCBP2 | 20 | - |
| exon-exon | FKBP1A-SDCBP2 | 20 | - | FKBP1A-SDCBP2 | 20 | - |
| exon-exon | FKBP1A-SDCBP2 | 20 | - | FKBP1A-SDCBP2 | 20 | - |
| exon-exon | FKBP1A-SDCBP2 | 20 | - | FKBP1A-SDCBP2 | 20 | - |
| exon-exon | FKBP3 | 14 | - | PRPF39 | 14 | - |
| exon-exon | FKBP3 | 14 | - | PRPF39 | 14 | - |
| exon-intron | FKBP5 | 6 | + | LOC112267956 | 6 | + |
| exon-intron | FKBP8 | 19 | + | MVB12B | 9 | + |
| exon-intron | FKBP8 | 19 | + | LOC112543469 | 19 | + |
| exon-intron | FKBP8 | 19 | + | LOC112543469 | 19 | + |
| exon-intron | FKBP8 | 19 | + | LOC112543469 | 19 | + |
| exon-intron | FKBP8 | 19 | + | LOC112543469 | 19 | + |
| exon-intron | FKBP8 | 19 | + | LOC112543469 | 19 | + |
| exon-intron | FKBPL | 6 | - | ATF6B | 6 | - |
| intron-exon | FKRP | 19 | - | STRN4 | 19 | - |
| intron-exon | FKRP | 19 | - | STRN4 | 19 | - |
| intron-exon | FKRP | 19 | - | STRN4 | 19 | - |
| intron-exon | FKRP | 19 | - | STRN4 | 19 | - |
| intron-exon | FKRP | 19 | - | STRN4 | 19 | - |
| exon-exon | FKTN | 9 | - | LOC105376199 | 9 | - |
| exon-exon | FLG | 1 | + | FLG-AS1 | 1 | + |
| intron-exon | FLG-AS1 | 1 | - | FLG | 1 | - |
| intron-exon | FLJ22447 | 14 | - | LINC01303 | 14 | - |
| exon-exon | FLJ23867 | 1 | - | FLJ23867 | 1 | + |
| exon-exon | FLJ23867 | 1 | - | FLJ23867 | 1 | + |
| exon-exon | FLJ23867 | 1 | - | FLJ23867 | 1 | + |
| exon-exon | FLJ23867 | 1 | - | FLJ23867 | 1 | + |
| intron-exon | FLJ31104 | 5 | + | CPM | 12 | - |
| exon-intron | FLNA | X | + | RHOU | 1 | - |
| exon-intron | FLNA | X | - | LOC107988032 | X | - |
| intron-exon | FLNB-AS1 | 3 | - | FLNB | 3 | - |
| intron-exon | FLNB-AS1 | 3 | - | FLNB | 3 | - |
| intron-exon | FLNB-AS1 | 3 | - | FLNB | 3 | - |
| exon-exon | FLNB-AS1 | 3 | - | FLNB | 3 | - |
| intron-exon | FLNC-AS1 | 7 | - | FLNC | 7 | - |
| exon-intron | FLT3LG | 19 | + | WDR89 | 14 | - |
| exon-intron | FLT3LG | 19 | - | ALDH16A1 | 19 | - |
| exon-exon | FLVCR2 | 14 | + | TTLL5 | 14 | + |
| exon-exon | FLVCR2 | 14 | + | TTLL5 | 14 | + |
| exon-exon | FLVCR2 | 14 | + | TTLL5 | 14 | + |
| exon-exon | FLVCR2 | 14 | + | TTLL5 | 14 | + |
| exon-intron | FMNL3 | 12 | - | DAZAP1 | 19 | + |
| exon-intron | FMR1-AS1 | X | + | LOC107032825 | X | + |
| exon-intron | FN1 | 2 | + | LOC112268430 | 2 | + |
| exon-intron | FN1 | 2 | - | POU2F1 | 1 | - |
| exon-intron | FN1 | 2 | - | RNA18SP5 | 21 | - |
| intron-exon | FNBP1 | 9 | + | FNBP1 | 9 | - |
| exon-exon | FNBP1 | 9 | - | GPT2 | 16 | + |
| exon-intron | FNBP4 | 11 | + | RHEX | 1 | - |
| exon-intron | FNBP4 | 11 | + | RHEX | 1 | - |
| exon-exon | FNTA | 8 | + | FNTAP2 | 13 | + |
| intron-exon | FNTA | 8 | - | GSTCD | 4 | + |
| exon-exon | FNTB | 14 | - | CHURC1 | 14 | - |
| exon-intron | FOXC2 | 16 | + | MEA1 | 6 | - |
| exon-intron | FOXD2 | 1 | - | LINC01389 | 1 | - |
| exon-intron | FOXD2 | 1 | - | LINC01389 | 1 | - |
| exon-exon | FOXH1 | 8 | - | SYNE1 | 6 | + |
| exon-exon | FOXH1 | 8 | - | KIFC2 | 8 | - |
| exon-intron | FOXK2 | 17 | - | TTLL1 | 22 | - |
| exon-intron | FOXK2 | 17 | - | LOC101929174 | 11 | - |
| exon-intron | FOXN3 | 14 | + | FOXO3 | 6 | - |
| exon-exon | FOXN3 | 14 | + | FOXN3P1 | X | + |
| intron-exon | FOXO1 | 13 | - | PAX3 | 2 | - |
| intron-exon | FOXO1 | 13 | - | PAX3 | 2 | - |
| exon-intron | FOXO6-AS1 | 1 | - | TANC1 | 2 | + |
| exon-exon | FOXP3 | X | - | CCDC22 | X | - |
| exon-exon | FOXRED1 | 11 | - | SRPRA | 11 | - |
| intron-exon | FP236315.3 | 21 | + | LOC107987323 | 22 | - |
| intron-exon | FP236315.3 | 21 | + | LOC107987323 | 22 | - |
| intron-exon | FP565260.4 | 21 | - | LOC105379484 | 21 | - |
| intron-exon | FP565260.4 | 21 | - | LOC105379484 | 21 | - |
| intron-exon | FPGS | 9 | - | CDK9 | 9 | - |
| exon-exon | FPGT | 1 | + | TNNI3K | 1 | + |
| intron-exon | FPR3 | 19 | - | FPR1 | 19 | - |
| intron-exon | FRG1-DT | 4 | + | LINC01596 | 4 | + |
| exon-intron | FRG1GP | 22 | + | FRG1KP | 9 | - |
| exon-exon | FRG1HP | 9 | + | LOC105376057 | 9 | + |
| intron-exon | FRG1HP | 9 | - | LOC440896 | 9 | - |
| intron-exon | FRMD4A | 10 | + | MCM7 | 7 | - |
| exon-intron | FRS2 | 12 | + | RAP1B | 12 | + |
| exon-exon | FRZB | 2 | - | FRZB | 2 | + |
| exon-exon | FSCN3 | 7 | - | LOC105375489 | 7 | - |
| exon-exon | FSD2 | 15 | - | SNHG21 | 15 | - |
| exon-exon | FSD2 | 15 | - | SNHG21 | 15 | - |
| exon-exon | FSD2 | 15 | - | SNHG21 | 15 | - |
| exon-exon | FSIP1 | 15 | + | LOC105370941 | 15 | + |
| exon-exon | FSIP1 | 15 | - | THBS1 | 15 | - |
| exon-intron | FSIP1 | 15 | - | TMEM63C | 14 | - |
| exon-exon | FSIP1 | 15 | - | THBS1 | 15 | - |
| exon-exon | FSIP1 | 15 | - | THBS1 | 15 | - |
| intron-exon | FSTL4 | 5 | + | CTB-49A3.2 | 5 | + |
| exon-intron | FSTL5 | 4 | - | PLEKHA7 | 11 | - |
| exon-exon | FTCD | 21 | + | FTCD-AS1 | 21 | + |
| exon-intron | FTH1 | 11 | - | C8orf44-SGK3 | 8 | - |
| exon-intron | FTH1 | 11 | - | LINC00603 | 5 | + |
| exon-intron | FTH1 | 11 | - | LOC105376035 | 9 | + |
| exon-exon | FTH1 | 11 | - | FTH1P20 | 2 | - |
| exon-exon | FTH1 | 11 | - | PRELID1 | 5 | + |
| exon-exon | FTH1 | 11 | - | LOC107984334 | 11 | - |
| exon-exon | FTH1 | 11 | - | LOC107984334 | 11 | - |
| exon-intron | FTH1 | 11 | - | LOC107984334 | 11 | - |
| exon-exon | FTH1 | 11 | - | LOC107984334 | 11 | - |
| exon-exon | FTH1 | 11 | - | LOC107984334 | 11 | - |
| intron-exon | FTH1 | 11 | - | LOC107984334 | 11 | - |
| intron-exon | FTH1 | 11 | - | LOC107984334 | 11 | - |
| exon-intron | FTH1P13 | 14 | - | NCOA4P1 | 14 | - |
| exon-intron | FTH1P20 | 2 | - | SCHLAP1 | 2 | - |
| exon-intron | FTH1P4 | 3 | - | L3MBTL4 | 18 | + |
| exon-exon | FTL | 19 | + | ADAR | 1 | - |
| exon-exon | FTL | 19 | + | GBP4 | 1 | - |
| exon-intron | FTL | 19 | - | SLC16A13 | 17 | + |
| exon-exon | FTL | 19 | - | FTL | 19 | + |
| exon-exon | FTL | 19 | - | FTL | 19 | + |
| exon-exon | FTL | 19 | - | FTL | 19 | + |
| exon-exon | FTLP3 | 20 | + | PSMC3 | 11 | - |
| exon-intron | FTLP3 | 20 | - | EPHX2 | 8 | + |
| exon-intron | FTLP6 | 11 | - | C11orf80 | 11 | + |
| intron-exon | FTX | X | + | RHOA | 3 | - |
| exon-intron | FUBP1 | 1 | - | SPRY4-AS1 | 5 | - |
| exon-exon | FUBP3 | 9 | - | FUBP3 | 9 | + |
| exon-exon | FUNDC2 | X | - | F8 | X | - |
| exon-exon | FUNDC2 | X | - | F8 | X | - |
| exon-exon | FUNDC2 | X | - | F8 | X | - |
| exon-exon | FUNDC2 | X | - | F8 | X | - |
| intron-exon | FUNDC2 | X | - | F8 | X | - |
| exon-exon | FURIN | 15 | - | FURIN | 15 | + |
| exon-exon | FURIN | 15 | - | FURIN | 15 | + |
| exon-exon | FURIN | 15 | - | FURIN | 15 | + |
| exon-exon | FURIN | 15 | - | FLOT2 | 17 | + |
| exon-exon | FURIN | 15 | - | PCNX3 | 11 | - |
| exon-exon | FUS | 16 | + | PHLDB2 | 3 | + |
| exon-exon | FUS | 16 | + | DDIT3 | 12 | - |
| exon-exon | FUS | 16 | + | DDIT3 | 12 | - |
| exon-exon | FUS | 16 | - | ND4 | MT | + |
| intron-exon | FUT11 | 10 | - | ZNF543 | 19 | - |
| exon-exon | FUT4 | 11 | + | PIWIL4 | 11 | + |
| exon-exon | FUT5 | 19 | + | NDUFA11 | 19 | + |
| intron-exon | FUT5 | 19 | + | NDUFA11 | 19 | + |
| exon-intron | FUZ | 19 | + | LOC105372435 | 19 | + |
| exon-intron | FUZ | 19 | + | LOC105372435 | 19 | + |
| exon-intron | FUZ | 19 | + | LOC105372435 | 19 | + |
| exon-exon | FUZ | 19 | - | AP2A1 | 19 | - |
| exon-exon | FUZ | 19 | - | AP2A1 | 19 | - |
| exon-intron | FUZ | 19 | - | AP2A1 | 19 | - |
| exon-intron | FXR2 | 17 | - | ZFP64 | 20 | - |
| intron-exon | FXYD1 | 19 | - | LGI4 | 19 | - |
| exon-exon | FXYD6 | 11 | - | FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD2 | 11 | - |
| exon-exon | FXYD6 | 11 | - | FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-exon | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-exon | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-exon | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-exon | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-exon | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-exon | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-exon | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-exon | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-exon | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-exon | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-exon | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-exon | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-exon | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-exon | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-exon | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-exon | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-exon | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-exon | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-exon | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-exon | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-exon | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-exon | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| intron-exon | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| intron-exon | FXYD6 | 11 | - | FXYD6-FXYD2 | 11 | - |
| exon-intron | FXYD7 | 19 | - | FXYD1 | 19 | - |
| exon-exon | FYN | 6 | + | LOC105377945 | 6 | + |
| exon-exon | FYN | 6 | + | LOC102724646 | 6 | + |
| intron-exon | FYTTD1 | 3 | + | POMT1 | 9 | + |
| intron-exon | FZD3 | 8 | - | GM2A | 5 | - |
| intron-exon | FZD5 | 2 | - | CCNYL1 | 2 | - |
| exon-intron | FZD6 | 8 | - | NT5DC1 | 6 | + |
| exon-intron | G2E3 | 14 | - | NAA25 | 12 | + |
| exon-intron | G2E3-AS1 | 14 | - | LOC112267868 | 14 | - |
| intron-exon | G3BP1 | 5 | - | ATOX1 | 5 | - |
| exon-intron | G6PC3 | 17 | + | UBE2Z | 17 | - |
| intron-exon | G6PD | X | + | IKBKG | X | + |
| exon-intron | G6PD | X | + | IKBKG | X | + |
| intron-exon | GAB1 | 4 | - | OXLD1 | 17 | + |
| exon-exon | GABBR1 | 6 | - | SV2B | 15 | + |
| exon-exon | GABBR1 | 6 | - | UBD | 6 | - |
| intron-exon | GABPA | 21 | - | ATP5PF | 21 | - |
| exon-exon | GABPA | 21 | - | ALB | 4 | + |
| intron-exon | GABPB2 | 1 | - | MLLT11 | 1 | - |
| exon-exon | GABRB1 | 4 | - | GABRA4 | 4 | - |
| exon-exon | GABRB1 | 4 | - | GABRA4 | 4 | - |
| exon-exon | GABRB1 | 4 | - | GABRA4 | 4 | - |
| exon-exon | GABRE | X | + | GABRE | X | - |
| exon-exon | GABRE | X | + | GABRE | X | - |
| exon-intron | GABRG3-AS1 | 15 | - | GABRG3 | 15 | - |
| exon-intron | GABRG3-AS1 | 15 | - | GABRG3 | 15 | - |
| exon-exon | GACAT2 | 18 | + | MTCL1 | 18 | + |
| exon-exon | GADD45A | 1 | + | FRA10AC1 | 10 | - |
| exon-intron | GADD45A | 1 | - | RAB10 | 2 | - |
| exon-exon | GADD45GIP1 | 19 | - | RAD23A | 19 | - |
| exon-exon | GAGE12B | X | + | GAGE12H | X | + |
| exon-exon | GAGE2A | X | + | GAGE1 | X | + |
| exon-intron | GALK1 | 17 | - | ITGB4 | 17 | - |
| exon-intron | GALK1 | 17 | - | ITGB4 | 17 | - |
| intron-exon | GALK2 | 15 | - | COPS2 | 15 | - |
| intron-exon | GALNT12 | 9 | + | LOC102724684 | 9 | + |
| exon-exon | GALNT8 | 12 | - | NDUFA9 | 12 | - |
| exon-intron | GALNT8 | 12 | - | RP11-234B24.6 | 12 | - |
| exon-intron | GALNT8 | 12 | - | NDUFA9 | 12 | - |
| exon-exon | GALNT8 | 12 | - | NDUFA9 | 12 | - |
| exon-exon | GALNT8 | 12 | - | NDUFA9 | 12 | - |
| exon-exon | GALNT8 | 12 | - | NDUFA9 | 12 | - |
| exon-intron | GALNT8 | 12 | - | NDUFA9 | 12 | - |
| exon-exon | GALR2 | 17 | + | ZACN | 17 | + |
| intron-exon | GALR2 | 17 | - | SRP68 | 17 | - |
| exon-exon | GALT | 9 | + | IL11RA | 9 | + |
| exon-exon | GANC | 15 | + | CAPN3 | 15 | + |
| exon-exon | GANC | 15 | - | TMEM87A | 15 | - |
| exon-intron | GAPDH | 12 | + | GAPDHP1 | X | - |
| exon-exon | GAPDH | 12 | + | DNAJC25-GNG10 | 9 | - |
| exon-intron | GAPDH | 12 | + | KANTR | X | - |
| exon-intron | GAPDH | 12 | + | UBQLN1 | 9 | + |
| intron-exon | GAPDHP1 | X | - | DCP1A | 3 | - |
| intron-exon | GARRE1 | 19 | + | GPI | 19 | + |
| exon-exon | GARS-DT | 7 | - | LOC100287825 | 7 | - |
| exon-intron | GARS1 | 7 | - | GARS-DT | 7 | - |
| exon-intron | GARS1 | 7 | - | GARS-DT | 7 | - |
| exon-intron | GARS1 | 7 | - | GARS-DT | 7 | - |
| exon-intron | GARS1 | 7 | - | GARS-DT | 7 | - |
| exon-intron | GARS1 | 7 | - | GARS-DT | 7 | - |
| exon-intron | GARS1 | 7 | - | GARS-DT | 7 | - |
| exon-intron | GARS1 | 7 | - | GARS-DT | 7 | - |
| exon-intron | GARS1 | 7 | - | GARS-DT | 7 | - |
| exon-intron | GARS1 | 7 | - | GARS-DT | 7 | - |
| exon-intron | GARS1-DT | 7 | - | LOC100287825 | 7 | - |
| exon-exon | GAS1 | 9 | + | RNA45SN2 | 21 | - |
| intron-exon | GAS2L3 | 12 | - | ND6 | MT | + |
| exon-intron | GAS5 | 1 | + | ZBTB37 | 1 | + |
| exon-exon | GAS5 | 1 | - | CENPL | 1 | - |
| exon-exon | GAS5 | 1 | - | CENPL | 1 | - |
| exon-intron | GAS7 | 17 | + | LOC105371191 | 16 | + |
| intron-exon | GATAD2B | 1 | - | CAVIN1 | 17 | - |
| exon-intron | GBA | 1 | - | LOC106627981 | 1 | - |
| exon-exon | GBA | 1 | - | GBAP1 | 1 | - |
| intron-exon | GBE1 | 3 | - | MALAT1 | 11 | + |
| intron-exon | GBE1 | 3 | - | MALAT1 | 11 | + |
| intron-exon | GBF1 | 10 | + | HDHD3 | 9 | - |
| exon-exon | GBP2 | 1 | + | LOC112268267 | 1 | + |
| exon-exon | GBP2 | 1 | + | LOC112268267 | 1 | + |
| exon-intron | GBP4 | 1 | + | LOC100421401 | 1 | + |
| exon-exon | GBP4 | 1 | + | LOC105378843 | 1 | + |
| intron-exon | GC | 4 | - | CUX1 | 7 | + |
| exon-intron | GCC2 | 2 | - | RANBP2 | 2 | - |
| intron-exon | GCC2 | 2 | - | RAB29 | 1 | - |
| exon-intron | GCFC2 | 2 | + | LOC105374813 | 2 | + |
| exon-exon | GCH1 | 14 | - | IFIT2 | 10 | - |
| exon-intron | GCLC | 6 | + | LOC105375095 | 6 | + |
| intron-exon | GCNT1 | 9 | + | RNA45SN2 | 21 | - |
| exon-intron | GCNT1 | 9 | - | UBE2G1 | 17 | - |
| exon-exon | GCNT2 | 6 | + | LOC101928146 | 6 | + |
| exon-intron | GCNT3 | 15 | + | GTF2A2 | 15 | + |
| intron-exon | GCNT7 | 20 | - | RTF2 | 20 | - |
| intron-exon | GCNT7 | 20 | - | RTF2 | 20 | - |
| exon-exon | GCSH | 16 | - | C16orf46 | 16 | - |
| intron-exon | GDAP1 | 8 | + | DUS4L-BCAP29 | 7 | - |
| exon-intron | GDE1 | 16 | + | NBEA | 13 | - |
| intron-exon | GDF1 | 19 | + | CERS1 | 19 | + |
| exon-exon | GDF1 | 19 | + | CERS1 | 19 | + |
| exon-exon | GDF1 | 19 | + | CERS1 | 19 | + |
| intron-exon | GDF9 | 5 | + | UQCRQ | 5 | + |
| exon-exon | GDI2 | 10 | - | GDI2P2 | 1 | + |
| exon-exon | GDPD2 | X | + | LOC105373244 | X | + |
| exon-exon | GEMIN4 | 17 | - | VPS53 | 17 | - |
| exon-exon | GEMIN4 | 17 | - | VPS53 | 17 | - |
| exon-intron | GEMIN4 | 17 | - | VPS53 | 17 | - |
| exon-exon | GEMIN4 | 17 | - | VPS53 | 17 | - |
| exon-exon | GEMIN7 | 19 | + | MARK4 | 19 | + |
| exon-intron | GEMIN7 | 19 | + | MARK4 | 19 | + |
| exon-exon | GEMIN8P4 | 1 | + | SLC34A2 | 4 | + |
| exon-exon | GET1 | 21 | + | SH3BGR | 21 | + |
| exon-exon | GET1-SH3BGR | 21 | + | SH3BGR | 21 | + |
| exon-exon | GET1-SH3BGR | 21 | - | GET1-SH3BGR | 21 | - |
| exon-intron | GET3 | 19 | - | SAMD4B | 19 | + |
| exon-exon | GFM2 | 5 | + | NSA2P7 | 9 | + |
| exon-exon | GFM2 | 5 | - | HEXB | 5 | - |
| exon-exon | GFM2 | 5 | - | HEXB | 5 | - |
| intron-exon | GFM2 | 5 | - | HEXB | 5 | - |
| exon-exon | GFPT2 | 5 | + | GFPT2 | 5 | - |
| exon-exon | GGA2 | 16 | - | RPF1 | 1 | + |
| intron-exon | GGA3 | 17 | + | MRPS7 | 17 | + |
| intron-exon | GGA3 | 17 | - | NUP85 | 17 | - |
| intron-exon | GGA3 | 17 | - | NUP85 | 17 | - |
| exon-exon | GGACT | 13 | - | PCCA | 13 | - |
| exon-exon | GGCX | 2 | - | MAT2A | 2 | - |
| exon-exon | GGCX | 2 | - | MAT2A | 2 | - |
| exon-exon | GGCX | 2 | - | MAT2A | 2 | - |
| exon-exon | GGCX | 2 | - | MAT2A | 2 | - |
| exon-exon | GGCX | 2 | - | MAT2A | 2 | - |
| exon-exon | GGNBP1 | 6 | + | BAK1 | 6 | + |
| exon-exon | GGT1 | 22 | - | SNRPD3 | 22 | - |
| exon-exon | GGT1 | 22 | - | SNRPD3 | 22 | - |
| exon-exon | GGT2 | 22 | + | POM121L8P | 22 | + |
| intron-exon | GGT3P | 22 | + | LOC105374868 | 2 | - |
| exon-intron | GGT4P | 13 | - | LOC101060145 | 13 | - |
| intron-exon | GGT7 | 20 | + | ACSS2 | 20 | + |
| exon-intron | GH1 | 17 | - | LOC112268204 | 17 | - |
| exon-exon | GH1 | 17 | - | CSHL1 | 17 | - |
| exon-exon | GH2 | 17 | - | CSH2 | 17 | - |
| exon-exon | GHRLOS | 3 | + | SEC13 | 3 | + |
| exon-exon | GIMAP1 | 7 | + | GIMAP5 | 7 | + |
| exon-exon | GIMAP1 | 7 | + | GIMAP5 | 7 | + |
| exon-exon | GIMAP1 | 7 | + | GIMAP5 | 7 | + |
| intron-exon | GIMAP3P | 7 | + | BET1P1 | 7 | + |
| exon-intron | GIMAP5 | 7 | - | GIMAP1 | 7 | - |
| exon-intron | GIMAP5 | 7 | - | GIMAP1 | 7 | - |
| exon-exon | GIMAP5 | 7 | - | GIMAP1 | 7 | - |
| exon-intron | GIT1 | 17 | + | CYB5D2 | 17 | - |
| exon-intron | GIT2 | 12 | - | ENOX1 | 13 | + |
| intron-exon | GIT2 | 12 | - | TCHP | 12 | - |
| intron-exon | GJA9 | 1 | - | MYCBP | 1 | - |
| exon-exon | GJA9-MYCBP | 1 | + | GJA9-MYCBP | 1 | + |
| exon-exon | GJA9-MYCBP | 1 | + | GJA9-MYCBP | 1 | + |
| exon-exon | GJA9-MYCBP | 1 | - | GJA9-MYCBP | 1 | - |
| exon-exon | GJA9-MYCBP | 1 | - | GJA9-MYCBP | 1 | - |
| exon-exon | GJA9-MYCBP | 1 | - | GJA9-MYCBP | 1 | - |
| exon-exon | GJA9-MYCBP | 1 | - | GJA9-MYCBP | 1 | - |
| exon-exon | GJA9-MYCBP | 1 | - | GJA9-MYCBP | 1 | - |
| exon-exon | GJA9-MYCBP | 1 | - | GJA9-MYCBP | 1 | - |
| exon-exon | GJA9-MYCBP | 1 | - | GJA9-MYCBP | 1 | - |
| exon-intron | GK5 | 3 | + | PEX14 | 1 | - |
| exon-exon | GKN1 | 2 | + | KANSL1 | 17 | - |
| exon-exon | GLG1 | 16 | + | TFPI2 | 7 | + |
| exon-intron | GLG1 | 16 | - | LOC107984827 | 16 | - |
| exon-intron | GLG1 | 16 | - | LOC107984827 | 16 | - |
| exon-intron | GLG1 | 16 | - | LOC107984827 | 16 | - |
| exon-intron | GLI1 | 12 | - | AC022506.2 | 12 | - |
| exon-intron | GLIDR | 9 | - | CNTNAP3P6 | 9 | - |
| exon-intron | GLIPR1 | 12 | + | LINC01347 | 1 | + |
| exon-intron | GLIPR1 | 12 | + | RBM6 | 3 | - |
| exon-intron | GLIPR2 | 9 | - | FKRP | 19 | + |
| exon-exon | GLIS2 | 16 | + | EIF1AX | X | - |
| intron-exon | GLMN | 1 | + | RPAP2 | 1 | + |
| intron-exon | GLMN | 1 | + | RPAP2 | 1 | + |
| exon-intron | GLMP | 1 | - | SMG5 | 1 | - |
| exon-intron | GLMP | 1 | - | SMG5 | 1 | - |
| exon-intron | GLMP | 1 | - | SMG5 | 1 | - |
| exon-intron | GLMP | 1 | - | SMG5 | 1 | - |
| exon-intron | GLMP | 1 | - | SMG5 | 1 | - |
| intron-exon | GLOD4 | 17 | + | MRM3 | 17 | + |
| exon-intron | GLRX | 5 | - | RHOBTB3 | 5 | - |
| exon-exon | GLUD1 | 10 | - | GLUD1P2 | 10 | - |
| exon-intron | GLUL | 1 | - | RBM47 | 4 | + |
| exon-intron | GLUL | 1 | - | AC244205.1 | 2 | - |
| exon-intron | GM2A | 5 | + | LOC105378234 | 5 | + |
| exon-intron | GMPPB | 3 | - | RNF123 | 3 | - |
| exon-exon | GMPPB | 3 | - | AMIGO3 | 3 | - |
| exon-exon | GMPPB | 3 | - | RNF123 | 3 | - |
| exon-exon | GMPPB | 3 | - | RNF123 | 3 | - |
| exon-exon | GMPPB | 3 | - | RNF123 | 3 | - |
| exon-exon | GMPPB | 3 | - | RNF123 | 3 | - |
| exon-exon | GMPSP1 | 4 | - | GMPS | 3 | - |
| exon-intron | GNAI2 | 3 | + | RBM20 | 10 | + |
| exon-intron | GNAS | 20 | + | LOC101927044 | 18 | + |
| exon-intron | GNAS | 20 | + | GRM7 | 3 | + |
| exon-intron | GNAS | 20 | + | JADE2 | 5 | - |
| intron-exon | GNAT2 | 1 | + | AMPD2 | 1 | + |
| exon-exon | GNAT2 | 1 | + | AMPD2 | 1 | + |
| exon-exon | GNB1 | 1 | + | DAD1 | 14 | - |
| intron-exon | GNB1 | 1 | + | HOMER2 | 15 | - |
| exon-exon | GNB2 | 7 | - | GNB2 | 7 | + |
| intron-exon | GNG12 | 1 | + | GNG12-AS1 | 1 | + |
| exon-exon | GNG14 | 19 | + | FBXW9 | 19 | + |
| exon-intron | GNG4 | 1 | - | FSIP1 | 15 | + |
| exon-exon | GNG5 | 1 | + | CTBS | 1 | + |
| exon-intron | GNG7 | 19 | + | SLC26A1 | 4 | - |
| exon-exon | GNMT | 6 | - | CNPY3 | 6 | - |
| exon-exon | GNMT | 6 | - | CNPY3 | 6 | - |
| exon-exon | GNPDA1 | 5 | + | GNPDA1 | 5 | - |
| exon-intron | GNPNAT1 | 14 | - | BAIAP2L1 | 7 | - |
| exon-intron | GNPNAT1 | 14 | - | BAIAP2L1 | 7 | - |
| exon-intron | GNPNAT1 | 14 | - | BAIAP2L1 | 7 | - |
| exon-exon | GNRH2 | 20 | - | PTPRA | 20 | - |
| exon-exon | GNRH2 | 20 | - | PTPRA | 20 | - |
| exon-exon | GNRHR2 | 1 | + | RBM8A | 1 | + |
| exon-exon | GNRHR2 | 1 | - | PEX11B | 1 | - |
| exon-intron | GNS | 12 | + | ITGB1-DT | 10 | + |
| exon-intron | GOLGA2P8 | 15 | + | AC091167.6 | 15 | + |
| exon-exon | GOLGA6L5P | 15 | + | UBE2Q2P1 | 15 | + |
| exon-intron | GOLGA8B | 15 | - | GOLGA8A | 15 | - |
| exon-exon | GOLGA8DP | 15 | + | GOLGA8S | 15 | + |
| exon-intron | GOLGA8K | 15 | + | LOC107987221 | 15 | + |
| exon-intron | GOLGA8R | 15 | + | LOC101927788 | 15 | + |
| exon-intron | GOLIM4 | 3 | - | PRKY | Y | - |
| exon-intron | GOLM2 | 15 | + | AC025043.1 | 15 | + |
| exon-intron | GOLT1B | 12 | + | LOC101927837 | 16 | + |
| exon-exon | GON4L | 1 | - | MSTO2P | 1 | - |
| exon-intron | GON7 | 14 | - | UBR7 | 14 | - |
| exon-exon | GORASP2 | 2 | - | GORASP2 | 2 | + |
| exon-intron | GOT1 | 10 | - | MIB1 | 18 | + |
| intron-exon | GPA33 | 1 | - | LOC105371600 | 1 | - |
| exon-intron | GPAA1 | 8 | - | KANSL1L | 2 | - |
| exon-intron | GPAA1 | 8 | - | KANSL1L | 2 | - |
| exon-intron | GPAA1 | 8 | - | KANSL1L | 2 | - |
| exon-exon | GPALPP1 | 13 | + | PRKCQ | 10 | - |
| exon-exon | GPALPP1 | 13 | + | PRKCQ | 10 | - |
| intron-exon | GPALPP1 | 13 | + | ITPRIPL2 | 16 | + |
| exon-exon | GPAM | 10 | + | GPAM | 10 | - |
| intron-exon | GPANK1 | 6 | + | CSNK2B | 6 | + |
| exon-exon | GPAT2 | 2 | - | FAHD2CP | 2 | - |
| exon-intron | GPATCH4 | 1 | - | NAXE | 1 | - |
| exon-exon | GPC2 | 7 | - | GAL3ST4 | 7 | - |
| exon-exon | GPC2 | 7 | - | GAL3ST4 | 7 | - |
| exon-exon | GPC3 | X | + | TNKS | 8 | - |
| intron-exon | GPC6-AS2 | 13 | - | GPC6 | 13 | - |
| exon-intron | GPCPD1 | 20 | - | ACAD10 | 12 | - |
| exon-exon | GPD2 | 2 | + | LOC105373707 | 2 | + |
| intron-exon | GPHN | 14 | - | ST6GAL2 | 2 | + |
| exon-exon | GPI | 19 | + | PDCD2L | 19 | + |
| exon-exon | GPLD1 | 6 | + | ALDH5A1 | 6 | + |
| exon-exon | GPM6B | X | - | OFD1 | X | - |
| exon-intron | GPN1 | 2 | + | SUPT7L | 2 | + |
| exon-exon | GPN3 | 12 | - | GPN3 | 12 | + |
| exon-intron | GPR107 | 9 | - | AAK1 | 2 | - |
| exon-exon | GPR137B | 1 | + | ERO1B | 1 | + |
| exon-intron | GPR141 | 7 | + | EPDR1 | 7 | + |
| exon-intron | GPR143 | X | + | LOC105373126 | X | + |
| exon-intron | GPR143 | X | + | LOC105373126 | X | + |
| intron-exon | GPR143P | Y | - | TBL1Y | Y | - |
| exon-exon | GPR156 | 3 | + | GPR156 | 3 | - |
| exon-exon | GPR156 | 3 | - | GSK3B | 3 | - |
| exon-intron | GPR156 | 3 | - | LOC105374065 | 3 | - |
| exon-intron | GPR157 | 1 | - | RERE | 1 | - |
| exon-intron | GPR158 | 10 | + | CSRP3-AS1 | 11 | - |
| exon-exon | GPR19 | 12 | + | CDKN1B | 12 | + |
| exon-exon | GPR19 | 12 | + | CDKN1B | 12 | + |
| exon-intron | GPR37L1 | 1 | - | ELF3-AS1 | 1 | - |
| exon-exon | GPR37L1 | 1 | - | PLXNB3 | X | - |
| intron-exon | GPR39 | 2 | + | FILIP1L | 3 | - |
| exon-intron | GPR39 | 2 | + | LOC105373623 | 2 | + |
| exon-exon | GPR4 | 19 | - | OPA3 | 19 | - |
| exon-exon | GPR4 | 19 | - | OPA3 | 19 | - |
| intron-exon | GPR62 | 3 | + | PCBP4 | 3 | + |
| intron-exon | GPR75-ASB3 | 2 | - | ASB3 | 2 | - |
| intron-exon | GPR75-ASB3 | 2 | - | ASB3 | 2 | - |
| intron-exon | GPR75-ASB3 | 2 | - | ASB3 | 2 | - |
| intron-exon | GPR75-ASB3 | 2 | - | ASB3 | 2 | - |
| intron-exon | GPR75-ASB3 | 2 | - | ASB3 | 2 | - |
| intron-exon | GPR75-ASB3 | 2 | - | ASB3 | 2 | - |
| intron-exon | GPR75-ASB3 | 2 | - | ASB3 | 2 | - |
| exon-exon | GPR75-ASB3 | 2 | - | GPR75-ASB3 | 2 | - |
| exon-exon | GPR75-ASB3 | 2 | - | ASB3 | 2 | - |
| exon-exon | GPR75-ASB3 | 2 | - | ASB3 | 2 | - |
| exon-exon | GPR75-ASB3 | 2 | - | ASB3 | 2 | - |
| exon-exon | GPR75-ASB3 | 2 | - | ASB3 | 2 | - |
| exon-exon | GPR75-ASB3 | 2 | - | ASB3 | 2 | - |
| intron-exon | GPR75-ASB3 | 2 | - | ASB3 | 2 | - |
| exon-exon | GPR89A | 1 | + | PDZK1 | 1 | + |
| exon-exon | GPR89A | 1 | - | NBPF25P | 1 | - |
| exon-exon | GPR89A | 1 | - | NBPF25P | 1 | - |
| exon-exon | GPR89A | 1 | - | NBPF25P | 1 | - |
| exon-exon | GPR89A | 1 | - | NBPF25P | 1 | - |
| exon-exon | GPR89A | 1 | - | NBPF25P | 1 | - |
| exon-intron | GPR89A | 1 | - | NBPF25P | 1 | - |
| exon-exon | GPR89A | 1 | - | NBPF25P | 1 | - |
| exon-exon | GPR89A | 1 | - | NBPF25P | 1 | - |
| exon-intron | GPR89B | 1 | + | SPDYE10P | 7 | - |
| exon-intron | GPRC5A | 12 | - | XRN2 | 20 | - |
| intron-exon | GPRC5D-AS1 | 12 | + | IL3RA | Y | - |
| intron-exon | GPS1 | 17 | + | DUS1L | 17 | + |
| intron-exon | GPS1 | 17 | - | RFNG | 17 | - |
| intron-exon | GPS1 | 17 | - | RFNG | 17 | - |
| intron-exon | GPS1 | 17 | - | RFNG | 17 | - |
| intron-exon | GPS1 | 17 | - | RFNG | 17 | - |
| exon-exon | GPS2 | 17 | + | NEURL4 | 17 | + |
| exon-exon | GPSM2 | 1 | + | CLCC1 | 1 | + |
| exon-intron | GPSM2 | 1 | + | ELAPOR1 | 1 | + |
| exon-exon | GPT2 | 16 | - | FNBP1 | 9 | + |
| exon-intron | GPX4 | 19 | + | RAP1A | 1 | - |
| intron-exon | GPX5 | 6 | - | GPX6 | 6 | - |
| intron-exon | GRB2 | 17 | - | ZNF740 | 12 | - |
| intron-exon | GREB1L | 18 | - | HTR1E | 6 | - |
| exon-intron | GRID1-AS1 | 10 | + | GRID1 | 10 | + |
| exon-intron | GRID2 | 4 | - | HIPK4 | 19 | + |
| intron-exon | GRIK1 | 21 | - | BACH1 | 21 | - |
| exon-exon | GRIN1 | 9 | - | SNRNP70 | 19 | - |
| intron-exon | GRIN2A | 16 | + | IMPDH1P11 | 16 | + |
| intron-exon | GRIN3A | 9 | + | LOC105376186 | 9 | + |
| intron-exon | GRIN3A | 9 | + | LOC105376186 | 9 | + |
| exon-exon | GRINA | 8 | - | PARP10 | 8 | - |
| intron-exon | GRINA | 8 | - | PARP10 | 8 | - |
| intron-exon | GRINA | 8 | - | PARP10 | 8 | - |
| intron-exon | GRINA | 8 | - | PARP10 | 8 | - |
| intron-exon | GRINA | 8 | - | PARP10 | 8 | - |
| intron-exon | GRINA | 8 | - | PARP10 | 8 | - |
| intron-exon | GRINA | 8 | - | PARP10 | 8 | - |
| intron-exon | GRINA | 8 | - | PARP10 | 8 | - |
| intron-exon | GRINA | 8 | - | PARP10 | 8 | - |
| intron-exon | GRINA | 8 | - | PARP10 | 8 | - |
| intron-exon | GRINA | 8 | - | PARP10 | 8 | - |
| intron-exon | GRINA | 8 | - | PARP10 | 8 | - |
| intron-exon | GRINA | 8 | - | PARP10 | 8 | - |
| intron-exon | GRINA | 8 | - | PARP10 | 8 | - |
| intron-exon | GRINA | 8 | - | PARP10 | 8 | - |
| intron-exon | GRINA | 8 | - | PARP10 | 8 | - |
| exon-exon | GRIP1 | 12 | - | HELB | 12 | - |
| exon-exon | GRIP2 | 3 | - | SLC6A6 | 3 | - |
| intron-exon | GRIPAP1 | X | + | ATP6 | MT | + |
| intron-exon | GRK5 | 10 | - | CACUL1 | 10 | - |
| exon-intron | GRK6 | 5 | + | PRR7-AS1 | 5 | + |
| exon-intron | GRM4 | 6 | - | LOC100133315 | 11 | - |
| exon-intron | GRM5-AS1 | 11 | + | GRM5 | 11 | + |
| intron-exon | GRN | 17 | - | HIPK1 | 1 | - |
| exon-exon | GRN | 17 | - | ST6GAL1 | 3 | - |
| intron-exon | GRPEL2-AS1 | 5 | - | GRPEL2 | 5 | + |
| exon-intron | GRPR | X | + | AC078993.1 | X | + |
| exon-exon | GRTP1 | 13 | - | LAMP1 | 13 | - |
| exon-exon | GRTP1 | 13 | - | LAMP1 | 13 | - |
| exon-exon | GRTP1 | 13 | - | LAMP1 | 13 | - |
| exon-exon | GRTP1 | 13 | - | LAMP1 | 13 | - |
| exon-exon | GRTP1 | 13 | - | LAMP1 | 13 | - |
| exon-exon | GRTP1 | 13 | - | LAMP1 | 13 | - |
| exon-exon | GRTP1 | 13 | - | LAMP1 | 13 | - |
| exon-exon | GRWD1 | 19 | + | KCNJ14 | 19 | + |
| exon-intron | GS1-124K5.11 | 7 | - | AL590807.1 | 13 | - |
| exon-intron | GS1-124K5.11 | 7 | - | LINC00174 | 7 | - |
| intron-exon | GSEC | 11 | - | DCPS | 11 | - |
| intron-exon | GSEC | 11 | - | DCPS | 11 | - |
| intron-exon | GSEC | 11 | - | DCPS | 11 | - |
| intron-exon | GSEC | 11 | - | DCPS | 11 | - |
| intron-exon | GSEC | 11 | - | DCPS | 11 | - |
| intron-exon | GSEC | 11 | - | DCPS | 11 | - |
| intron-exon | GSEC | 11 | - | DCPS | 11 | - |
| intron-exon | GSEC | 11 | - | DCPS | 11 | - |
| intron-exon | GSEC | 11 | - | DCPS | 11 | - |
| intron-exon | GSEC | 11 | - | DCPS | 11 | - |
| intron-exon | GSEC | 11 | - | DCPS | 11 | - |
| intron-exon | GSEC | 11 | - | DCPS | 11 | - |
| intron-exon | GSEC | 11 | - | DCPS | 11 | - |
| intron-exon | GSEC | 11 | - | DCPS | 11 | - |
| intron-exon | GSEC | 11 | - | DCPS | 11 | - |
| intron-exon | GSEC | 11 | - | DCPS | 11 | - |
| exon-intron | GSEC | 11 | - | DCPS | 11 | - |
| exon-exon | GSK3B | 3 | - | NCALD | 8 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| intron-exon | GSN | 9 | - | RAB14 | 9 | - |
| exon-exon | GSS | 20 | + | OASL | 12 | - |
| exon-exon | GSS | 20 | + | OASL | 12 | - |
| intron-exon | GSTA1 | 6 | - | ZNF548 | 19 | + |
| exon-intron | GSTCD | 4 | - | INTS12 | 4 | - |
| exon-intron | GSTK1 | 7 | + | TMEM139-AS1 | 7 | + |
| exon-intron | GSTM3 | 1 | - | GSTM5 | 1 | - |
| exon-intron | GSTM5 | 1 | - | EPS8L3 | 1 | - |
| exon-intron | GSTO2 | 10 | - | GSTO1 | 10 | - |
| exon-exon | GSTP1 | 11 | - | NSD2 | 4 | + |
| exon-exon | GTF2F2 | 13 | - | TRIL | 7 | - |
| exon-intron | GTF2H2 | 5 | - | NAIP | 5 | - |
| exon-exon | GTF2H3 | 12 | - | EIF2B1 | 12 | - |
| exon-exon | GTF2H3 | 12 | - | EIF2B1 | 12 | - |
| exon-exon | GTF2H3 | 12 | - | EIF2B1 | 12 | - |
| exon-exon | GTF2H3 | 12 | - | EIF2B1 | 12 | - |
| intron-exon | GTF3A | 13 | + | MTIF3 | 13 | + |
| exon-exon | GTF3C2 | 2 | + | GTF3C2-AS1 | 2 | + |
| intron-exon | GTF3C2 | 2 | + | GTF3C2-AS1 | 2 | + |
| exon-intron | GTF3C2 | 2 | - | WWOX | 16 | - |
| exon-exon | GTF3C3 | 2 | - | CCDC150 | 2 | - |
| exon-exon | GTPBP10 | 7 | + | CLDN12 | 7 | + |
| exon-intron | GTPBP6 | Y | - | SETX | 9 | + |
| exon-exon | GTPBP6 | Y | - | PLCXD1 | Y | - |
| exon-exon | GTPBP6 | Y | - | PLCXD1 | Y | - |
| exon-intron | GTPBP6 | Y | - | DLC1 | 8 | + |
| exon-intron | GTPBP6 | Y | - | UBXN4 | 2 | + |
| exon-intron | GTPBP8 | 3 | + | NEPRO | 3 | + |
| exon-intron | GTSF1 | 12 | - | LOC102724050 | 12 | - |
| exon-exon | GUCY2C | 12 | - | C12orf60 | 12 | - |
| intron-exon | GUF1 | 4 | + | GNPDA2 | 4 | + |
| exon-exon | GUF1 | 4 | - | YIPF7 | 4 | - |
| exon-exon | GUF1 | 4 | - | YIPF7 | 4 | - |
| exon-intron | GUSBP13 | 5 | + | GUSBP16 | 5 | + |
| exon-intron | GUSBP13 | 5 | + | NAIPP2 | 5 | + |
| exon-intron | GUSBP13 | 5 | - | AC131392.1 | 5 | - |
| exon-exon | GUSBP15 | 5 | - | GUSBP14 | 5 | - |
| exon-intron | GUSBP15 | 5 | - | GUSBP14 | 5 | - |
| intron-exon | GUSBP16 | 5 | + | NAIPP1 | 5 | + |
| intron-exon | GUSBP9 | 5 | - | GUSBP15 | 5 | - |
| intron-exon | GUSBP9 | 5 | - | GUSBP16 | 5 | + |
| exon-intron | GVQW3 | 11 | - | UVRAG | 11 | - |
| exon-exon | GYS2 | 12 | - | SPX | 12 | - |
| exon-exon | GZF1 | 20 | + | NAPB | 20 | + |
| exon-exon | GZF1 | 20 | - | PTRH2 | 17 | - |
| exon-exon | H1-3 | 6 | - | HSPA8 | 11 | - |
| exon-exon | H1-6 | 6 | + | H2BC4 | 6 | + |
| exon-exon | H2AC17 | 6 | - | H3C12 | 6 | - |
| exon-exon | H2BC4 | 6 | - | SECISBP2 | 9 | + |
| exon-exon | H3C12 | 6 | + | H2AC17 | 6 | + |
| exon-exon | H3C14 | 1 | - | HNRNPK | 9 | - |
| exon-intron | H4C11 | 6 | + | H4C12 | 6 | - |
| exon-exon | H4C8 | 6 | - | LOC105374985 | 6 | - |
| exon-exon | H4C8 | 6 | - | LOC105374985 | 6 | - |
| exon-exon | H4C8 | 6 | - | LOC105374985 | 6 | - |
| exon-exon | H4C8 | 6 | - | LOC105374985 | 6 | - |
| exon-exon | H4C8 | 6 | - | LOC105374985 | 6 | - |
| exon-exon | H4C8 | 6 | - | LOC105374985 | 6 | - |
| exon-exon | H4C8 | 6 | - | LOC105374985 | 6 | - |
| exon-exon | H4C8 | 6 | - | LOC105374985 | 6 | - |
| exon-intron | H6PD | 1 | - | SEC23B | 20 | - |
| exon-intron | HADH | 4 | + | LINC02649 | 10 | - |
| exon-intron | HADHA | 2 | - | SPAG9 | 17 | + |
| exon-intron | HAGHL | 16 | + | CIAO3 | 16 | + |
| exon-exon | HAGHL | 16 | - | SLC38A10 | 17 | + |
| exon-intron | HAND2 | 4 | + | HAND2-AS1 | 4 | + |
| exon-exon | HARS2 | 5 | - | HARS1 | 5 | - |
| exon-exon | HAS2-AS1 | 8 | - | HAS2 | 8 | - |
| intron-exon | HAUS4 | 14 | - | RPL30 | 8 | - |
| exon-exon | HAUS6P1 | 7 | + | HAUS6P3 | 7 | + |
| exon-intron | HAVCR1 | 5 | + | ZNF14 | 19 | + |
| intron-exon | HBA-LCR | 16 | + | NPRL3 | 16 | - |
| exon-intron | HBB | 11 | - | NPTN | 15 | + |
| exon-intron | HBB | 11 | - | LOC107133510 | 11 | - |
| intron-exon | HBB-LCR | 11 | - | HBE1 | 11 | - |
| exon-intron | HBD | 11 | - | HBB | 11 | - |
| exon-intron | HBE1 | 11 | + | HBB-LCR | 11 | + |
| exon-intron | HBG1 | 11 | + | LOC106099065 | 11 | + |
| exon-intron | HBG2 | 11 | + | LOC106099065 | 11 | + |
| exon-intron | HBG2 | 11 | + | LOC106099065 | 11 | + |
| exon-intron | HBG2 | 11 | + | LOC106099065 | 11 | + |
| exon-intron | HBG2 | 11 | + | LOC106099065 | 11 | + |
| exon-intron | HBG2 | 11 | + | LOC106099065 | 11 | + |
| exon-intron | HBG2 | 11 | + | LOC106099065 | 11 | + |
| exon-intron | HBG2 | 11 | + | LOC106099065 | 11 | + |
| exon-intron | HBG2 | 11 | + | LOC106099065 | 11 | + |
| exon-intron | HBG2 | 11 | + | LOC106099065 | 11 | + |
| exon-intron | HBG2 | 11 | + | LOC106099065 | 11 | + |
| exon-intron | HBG2 | 11 | + | LOC106099065 | 11 | + |
| exon-intron | HBG2 | 11 | + | LOC106099065 | 11 | + |
| exon-intron | HBG2 | 11 | + | LOC106099065 | 11 | + |
| exon-intron | HBG2 | 11 | + | LOC106099065 | 11 | + |
| exon-intron | HBG2 | 11 | + | LOC106099065 | 11 | + |
| exon-intron | HBG2 | 11 | + | LOC106099065 | 11 | + |
| exon-intron | HBG2 | 11 | + | LOC106099065 | 11 | + |
| exon-intron | HBG2 | 11 | + | LOC106099065 | 11 | + |
| exon-intron | HBG2 | 11 | + | LOC106099065 | 11 | + |
| exon-intron | HBG2 | 11 | + | LOC106099065 | 11 | + |
| exon-intron | HBG2 | 11 | + | LOC106099065 | 11 | + |
| exon-intron | HBG2 | 11 | + | LOC106099065 | 11 | + |
| exon-intron | HBG2 | 11 | + | LOC106099065 | 11 | + |
| exon-intron | HBG2 | 11 | + | LOC106099065 | 11 | + |
| exon-intron | HBG2 | 11 | + | LOC106099065 | 11 | + |
| exon-intron | HBG2 | 11 | + | LOC106099065 | 11 | + |
| exon-intron | HBG2 | 11 | + | LOC106099065 | 11 | + |
| exon-intron | HBG2 | 11 | + | LOC106099065 | 11 | + |
| exon-intron | HBG2 | 11 | + | LOC106099065 | 11 | + |
| exon-intron | HBG2 | 11 | + | LOC106099065 | 11 | + |
| exon-intron | HBG2 | 11 | + | LOC106099065 | 11 | + |
| exon-intron | HBG2 | 11 | + | LOC106099065 | 11 | + |
| exon-intron | HBG2 | 11 | + | LOC106099065 | 11 | + |
| exon-intron | HBG2 | 11 | + | LOC106099065 | 11 | + |
| exon-intron | HBG2 | 11 | + | LOC106099065 | 11 | + |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-intron | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-intron | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-exon | HBG2 | 11 | - | HBG1 | 11 | - |
| exon-exon | HCFC1R1 | 16 | + | THOC6 | 16 | + |
| exon-exon | HCG18 | 6 | + | TRIM39 | 6 | + |
| exon-exon | HCG25 | 6 | + | VPS52 | 6 | + |
| exon-exon | HCG4 | 6 | + | HLA-V | 6 | + |
| exon-exon | HCG4 | 6 | + | HLA-V | 6 | + |
| exon-exon | HCG4 | 6 | + | HLA-V | 6 | + |
| exon-exon | HCG4 | 6 | + | HLA-V | 6 | + |
| exon-exon | HCG4 | 6 | + | HLA-V | 6 | + |
| intron-exon | HCG4P8 | 6 | + | HLA-G | 6 | + |
| exon-exon | HCN3 | 1 | - | CLK2 | 1 | - |
| exon-exon | HCN3 | 1 | - | CLK2 | 1 | - |
| exon-intron | HDAC2 | 6 | + | HDAC2-AS2 | 6 | + |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| intron-exon | HDAC2-AS2 | 6 | - | HDAC2 | 6 | - |
| exon-exon | HDAC4-AS1 | 2 | - | HDAC4 | 2 | - |
| intron-exon | HDAC4-AS1 | 2 | - | HDAC4 | 2 | - |
| exon-intron | HDDC2 | 6 | - | TPD52L1 | 6 | - |
| exon-exon | HDHD2 | 18 | + | IER3IP1 | 18 | + |
| exon-exon | HDHD2 | 18 | + | IER3IP1 | 18 | + |
| exon-exon | HEATR1 | 1 | - | LGALS8 | 1 | - |
| exon-exon | HEATR1 | 1 | - | LGALS8 | 1 | - |
| intron-exon | HEATR1 | 1 | - | WAC | 10 | - |
| intron-exon | HEATR1 | 1 | - | LGALS8 | 1 | - |
| intron-exon | HEATR1 | 1 | - | LGALS8 | 1 | - |
| exon-exon | HEATR4 | 14 | + | ACOT1 | 14 | + |
| intron-exon | HEATR9 | 17 | - | TAF15 | 17 | - |
| exon-intron | HECA | 6 | + | TXLNB | 6 | + |
| exon-intron | HECA | 6 | + | TXLNB | 6 | + |
| intron-exon | HECTD1 | 14 | - | HCFC1R1 | 16 | - |
| intron-exon | HECTD1 | 14 | - | HCFC1R1 | 16 | - |
| intron-exon | HECTD2-AS1 | 10 | + | LOC105378433 | 10 | + |
| exon-exon | HEIH | 5 | + | LINC00847 | 5 | + |
| intron-exon | HELB | 12 | + | PAQR6 | 1 | + |
| intron-exon | HELLS | 10 | + | MIGA1 | 1 | - |
| exon-intron | HELLS | 10 | - | TBC1D12 | 10 | - |
| exon-intron | HEPACAM | 11 | - | LOC107984406 | 11 | - |
| intron-exon | HERC2P10 | 15 | + | HERC2P2 | 15 | - |
| exon-exon | HERC2P2 | 15 | - | RNA45SN2 | 21 | + |
| exon-exon | HERC2P2 | 15 | - | HERC2P9 | 15 | - |
| exon-exon | HERC2P2 | 15 | - | HERC2P9 | 15 | - |
| exon-exon | HERC2P2 | 15 | - | HERC2P9 | 15 | - |
| exon-exon | HERC2P9 | 15 | - | HERC2P2 | 15 | - |
| exon-exon | HERC2P9 | 15 | - | HERC2P2 | 15 | - |
| exon-intron | HERC4 | 10 | + | PTPN1 | 20 | + |
| exon-exon | HERPUD2 | 7 | + | LOC101930085 | 7 | + |
| exon-exon | HEXA-AS1 | 15 | - | HEXA | 15 | - |
| exon-exon | HEXB | 5 | + | GFM2 | 5 | + |
| exon-exon | HEYL | 1 | - | ENTPD6 | 20 | + |
| intron-exon | HFM1 | 1 | + | UBAP2 | 9 | - |
| exon-intron | HGS | 17 | - | TIMP2 | 17 | - |
| intron-exon | HGSNAT | 8 | - | HGSNAT | 8 | + |
| intron-exon | HGSNAT | 8 | - | HGSNAT | 8 | + |
| exon-intron | HHATL | 3 | - | LOC107985833 | 2 | - |
| intron-exon | HHATL-AS1 | 3 | - | HHATL | 3 | - |
| intron-exon | HHATL-AS1 | 3 | - | HHATL | 3 | - |
| exon-intron | HIC1 | 17 | + | SMG6 | 17 | + |
| intron-exon | HID1-AS1 | 17 | - | HID1 | 17 | - |
| intron-exon | HID1-AS1 | 17 | - | HID1 | 17 | - |
| intron-exon | HID1-AS1 | 17 | - | HID1 | 17 | - |
| intron-exon | HID1-AS1 | 17 | - | HID1 | 17 | - |
| intron-exon | HID1-AS1 | 17 | - | HID1 | 17 | - |
| intron-exon | HID1-AS1 | 17 | - | HID1 | 17 | - |
| intron-exon | HID1-AS1 | 17 | - | HID1 | 17 | - |
| exon-intron | HIF1A-AS3 | 14 | - | HIF1A | 14 | - |
| exon-exon | HIGD1A | 3 | + | HIGD1A | 3 | - |
| exon-exon | HIGD1A | 3 | - | CCDC13 | 3 | - |
| exon-exon | HIGD1AP1 | 12 | + | CCDC13 | 3 | - |
| exon-exon | HIGD1AP1 | 12 | + | CCDC13 | 3 | - |
| exon-exon | HIPK1 | 1 | - | UROD | 1 | + |
| exon-intron | HIPK2 | 7 | + | LOC105375530 | 7 | + |
| exon-intron | HIPK2 | 7 | + | LOC105375530 | 7 | + |
| intron-exon | HIPK2 | 7 | + | TBXAS1 | 7 | + |
| exon-exon | HIPK2 | 7 | - | NAP1L1 | 12 | + |
| exon-exon | HIVEP1 | 6 | + | HIVEP1 | 6 | - |
| exon-exon | HLA-A | 6 | - | HCG4B | 6 | - |
| exon-exon | HLA-A | 6 | - | HLA-H | 6 | - |
| exon-exon | HLA-A | 6 | - | HLA-H | 6 | - |
| intron-exon | HLA-B | 6 | - | HLA-C | 6 | - |
| intron-exon | HLA-B | 6 | - | HLA-C | 6 | - |
| intron-exon | HLA-B | 6 | - | HLA-C | 6 | - |
| exon-exon | HLA-B | 6 | - | HLA-C | 6 | - |
| exon-exon | HLA-B | 6 | - | HLA-C | 6 | - |
| exon-exon | HLA-B | 6 | - | HLA-C | 6 | - |
| exon-exon | HLA-B | 6 | - | HLA-C | 6 | - |
| exon-exon | HLA-B | 6 | - | HLA-C | 6 | - |
| intron-exon | HLA-B | 6 | - | HLA-C | 6 | - |
| exon-exon | HLA-B | 6 | - | HLA-C | 6 | - |
| exon-exon | HLA-B | 6 | - | HLA-C | 6 | - |
| exon-exon | HLA-B | 6 | - | HLA-C | 6 | - |
| exon-exon | HLA-B | 6 | - | HLA-C | 6 | - |
| exon-exon | HLA-B | 6 | - | HLA-C | 6 | - |
| exon-exon | HLA-B | 6 | - | HLA-C | 6 | - |
| exon-exon | HLA-B | 6 | - | HLA-C | 6 | - |
| exon-exon | HLA-B | 6 | - | HLA-C | 6 | - |
| exon-exon | HLA-B | 6 | - | HLA-C | 6 | - |
| exon-exon | HLA-B | 6 | - | HLA-C | 6 | - |
| exon-exon | HLA-B | 6 | - | HLA-C | 6 | - |
| exon-exon | HLA-C | 6 | + | HLA-B | 6 | + |
| exon-exon | HLA-C | 6 | + | HLA-B | 6 | + |
| exon-exon | HLA-C | 6 | + | HLA-B | 6 | + |
| intron-exon | HLA-C | 6 | + | HLA-B | 6 | + |
| exon-exon | HLA-C | 6 | + | HLA-B | 6 | + |
| exon-intron | HLA-C | 6 | - | COPZ1 | 12 | - |
| exon-intron | HLA-C | 6 | - | ZMYM2 | 13 | + |
| exon-intron | HLA-DMA | 6 | - | HLA-DMB | 6 | - |
| exon-intron | HLA-DMB | 6 | + | LOC107648856 | 6 | + |
| exon-intron | HLA-DMB | 6 | + | LOC107648856 | 6 | + |
| exon-intron | HLA-DMB | 6 | + | AL645941.2 | 6 | + |
| exon-exon | HLA-DMB | 6 | + | HLA-DMA | 6 | + |
| intron-exon | HLA-DPA1 | 6 | + | HLA-DPB1 | 6 | + |
| intron-exon | HLA-DPA1 | 6 | + | HLA-DPB1 | 6 | + |
| exon-exon | HLA-DPB1 | 6 | - | HLA-DPA1 | 6 | - |
| exon-exon | HLA-DPB1 | 6 | - | HLA-DPA1 | 6 | - |
| exon-exon | HLA-DPB1 | 6 | - | HLA-DPA1 | 6 | - |
| exon-exon | HLA-DPB1 | 6 | - | HLA-DPA1 | 6 | - |
| exon-exon | HLA-DPB1 | 6 | - | HLA-DPA1 | 6 | - |
| exon-exon | HLA-DPB1 | 6 | - | HLA-DPA1 | 6 | - |
| exon-exon | HLA-DPB1 | 6 | - | HLA-DPA1 | 6 | - |
| exon-exon | HLA-DPB1 | 6 | - | HLA-DPA1 | 6 | - |
| exon-exon | HLA-DPB1 | 6 | - | HLA-DPA1 | 6 | - |
| exon-exon | HLA-DPB1 | 6 | - | HLA-DPA1 | 6 | - |
| exon-exon | HLA-DPB1 | 6 | - | HLA-DPA1 | 6 | - |
| exon-exon | HLA-DPB1 | 6 | - | HLA-DPA1 | 6 | - |
| exon-exon | HLA-DPB1 | 6 | - | HLA-DPA1 | 6 | - |
| exon-exon | HLA-DPB1 | 6 | - | HLA-DPA1 | 6 | - |
| exon-exon | HLA-DPB1 | 6 | - | HLA-DPA1 | 6 | - |
| exon-exon | HLA-DPB1 | 6 | - | HLA-DPA1 | 6 | - |
| exon-exon | HLA-DPB1 | 6 | - | HLA-DPA1 | 6 | - |
| exon-intron | HLA-DPB1 | 6 | - | HLA-DPA1 | 6 | - |
| exon-exon | HLA-DPB1 | 6 | - | HLA-DPA1 | 6 | - |
| exon-exon | HLA-DPB1 | 6 | - | HLA-DPA1 | 6 | - |
| exon-exon | HLA-DPB1 | 6 | - | HLA-DPA1 | 6 | - |
| exon-exon | HLA-DPB1 | 6 | - | HLA-DPA1 | 6 | - |
| exon-exon | HLA-DPB1 | 6 | - | HLA-DPA1 | 6 | - |
| exon-exon | HLA-DPB1 | 6 | - | HLA-DPA1 | 6 | - |
| exon-intron | HLA-DPB1 | 6 | - | HLA-DPA1 | 6 | - |
| exon-intron | HLA-DPB1 | 6 | - | HLA-DPA1 | 6 | - |
| exon-exon | HLA-DPB1 | 6 | - | HLA-DPA1 | 6 | - |
| exon-exon | HLA-DPB1 | 6 | - | HLA-DPA1 | 6 | - |
| exon-exon | HLA-DPB1 | 6 | - | HLA-DPA1 | 6 | - |
| exon-exon | HLA-DPB1 | 6 | - | HLA-DPA1 | 6 | - |
| exon-exon | HLA-DPB1 | 6 | - | HLA-DPA1 | 6 | - |
| exon-intron | HLA-DPB1 | 6 | - | HLA-DPA1 | 6 | - |
| exon-intron | HLA-DPB1 | 6 | - | HLA-DPA1 | 6 | - |
| exon-intron | HLA-DQA2 | 6 | - | LOC107986589 | 6 | - |
| intron-exon | HLA-DQB1-AS1 | 6 | + | HLA-DQB2 | 6 | + |
| intron-exon | HLA-DQB1-AS1 | 6 | + | HLA-DQB2 | 6 | + |
| exon-intron | HLA-DRB1 | 6 | - | ARHGEF18 | 19 | + |
| exon-exon | HLA-DRB1 | 6 | - | HLA-DRB6 | 6 | - |
| exon-exon | HLA-DRB1 | 6 | - | HLA-DRB6 | 6 | - |
| exon-exon | HLA-DRB1 | 6 | - | HLA-DRB6 | 6 | - |
| exon-exon | HLA-DRB1 | 6 | - | HLA-DRB5 | 6 | - |
| exon-exon | HLA-DRB1 | 6 | - | HLA-DRB5 | 6 | - |
| intron-exon | HLA-DRB1 | 6 | - | FGR | 1 | + |
| intron-exon | HLA-DRB1 | 6 | - | HLA-DRB5 | 6 | - |
| exon-exon | HLA-DRB1 | 6 | - | HLA-DRB5 | 6 | - |
| exon-exon | HLA-DRB1 | 6 | - | HLA-DRB5 | 6 | - |
| exon-exon | HLA-DRB1 | 6 | - | HLA-DRB5 | 6 | - |
| exon-exon | HLA-DRB6 | 6 | + | HLA-DRB1 | 6 | + |
| exon-intron | HLA-E | 6 | + | AC069368.1 | 15 | - |
| exon-exon | HLA-F-AS1 | 6 | - | HLA-F | 6 | - |
| intron-exon | HLA-F-AS1 | 6 | - | HLA-F | 6 | - |
| exon-exon | HLA-H | 6 | + | HLA-A | 6 | + |
| exon-exon | HLA-H | 6 | + | HLA-A | 6 | + |
| intron-exon | HLA-H | 6 | - | HCG4 | 6 | - |
| exon-exon | HLA-H | 6 | - | HLA-G | 6 | - |
| exon-exon | HLA-K | 6 | - | HLA-H | 6 | - |
| exon-intron | HLA-K | 6 | - | HCG4B | 6 | - |
| exon-exon | HLA-L | 6 | + | HCG18 | 6 | + |
| exon-intron | HLA-V | 6 | - | HCG4 | 6 | - |
| exon-intron | HLTF | 3 | + | HDAC4 | 2 | - |
| intron-exon | HLX-AS1 | 1 | + | HLX | 1 | + |
| intron-exon | HLX-AS1 | 1 | + | HLX | 1 | + |
| intron-exon | HM13-AS1 | 20 | - | HM13 | 20 | - |
| intron-exon | HM13-AS1 | 20 | - | HM13 | 20 | - |
| intron-exon | HM13-AS1 | 20 | - | HM13 | 20 | - |
| intron-exon | HM13-AS1 | 20 | - | HM13 | 20 | - |
| intron-exon | HM13-AS1 | 20 | - | HM13 | 20 | - |
| intron-exon | HM13-AS1 | 20 | - | HM13 | 20 | - |
| intron-exon | HM13-AS1 | 20 | - | HM13 | 20 | - |
| intron-exon | HM13-AS1 | 20 | - | HM13 | 20 | - |
| intron-exon | HM13-AS1 | 20 | - | HM13 | 20 | - |
| intron-exon | HM13-AS1 | 20 | - | HM13 | 20 | - |
| intron-exon | HM13-AS1 | 20 | - | HM13 | 20 | - |
| intron-exon | HM13-AS1 | 20 | - | HM13 | 20 | - |
| intron-exon | HM13-AS1 | 20 | - | HM13 | 20 | - |
| intron-exon | HM13-AS1 | 20 | - | HM13 | 20 | - |
| intron-exon | HM13-AS1 | 20 | - | HM13 | 20 | - |
| intron-exon | HM13-AS1 | 20 | - | PTPRJ | 11 | - |
| intron-exon | HMG20A | 15 | - | COL3A1 | 2 | + |
| intron-exon | HMG20B | 19 | - | MFSD12 | 19 | - |
| exon-exon | HMGA1 | 6 | + | HMGA1P3 | 12 | - |
| exon-exon | HMGA2 | 12 | + | ELAC2 | 17 | - |
| exon-exon | HMGA2 | 12 | + | ELAC2 | 17 | - |
| exon-exon | HMGA2 | 12 | + | ELAC2 | 17 | - |
| exon-exon | HMGB1 | 13 | - | HMGB1P5 | 3 | + |
| exon-intron | HMGB1P5 | 3 | - | TLE4 | 9 | - |
| exon-exon | HMGB1P5 | 3 | - | DDX27 | 20 | - |
| exon-intron | HMGB3P24 | 9 | - | LOC102724322 | 9 | - |
| intron-exon | HMGB3P24 | 9 | - | LOC102724322 | 9 | - |
| exon-exon | HMGCL | 1 | - | WASHC1 | 9 | - |
| exon-exon | HMGN2 | 1 | + | HMGN2P27 | 5 | - |
| exon-intron | HMGN2P4 | 5 | - | AL020994.2 | 22 | - |
| exon-exon | HMGN3 | 6 | - | RXYLT1 | 12 | + |
| exon-exon | HMGN3-AS1 | 6 | - | HMGN3 | 6 | - |
| exon-exon | HMGN3-AS1 | 6 | - | HMGN3 | 6 | - |
| exon-intron | HMGN3-AS1 | 6 | - | HMGN3 | 6 | - |
| exon-exon | HMGN3-AS1 | 6 | - | HMGN3 | 6 | - |
| exon-exon | HMGN3-AS1 | 6 | - | HMGN3 | 6 | - |
| exon-exon | HMGN3-AS1 | 6 | - | HMGN3 | 6 | - |
| exon-exon | HMGXB3 | 5 | - | TIGD6 | 5 | - |
| exon-exon | HMMR-AS1 | 5 | - | HMMR | 5 | - |
| exon-intron | HNF4A-AS1 | 20 | - | HNF4A | 20 | - |
| exon-exon | HNRNPA0 | 5 | - | CDIPT | 16 | - |
| exon-exon | HNRNPA1 | 12 | - | HNRNPA1P48 | 16 | - |
| exon-exon | HNRNPA1P35 | 2 | + | HNRNPA1 | 12 | + |
| exon-exon | HNRNPA2B1 | 7 | + | NCL | 2 | + |
| exon-exon | HNRNPA3 | 2 | + | HNRNPA3 | 2 | - |
| exon-intron | HNRNPA3 | 2 | + | LOC105378275 | 10 | - |
| exon-exon | HNRNPAB | 5 | + | HSPA1A | 6 | + |
| intron-exon | HNRNPC | 14 | + | HNRNPC | 14 | - |
| intron-exon | HNRNPC | 14 | - | DTWD1 | 15 | + |
| intron-exon | HNRNPDL | 4 | - | MIEN1 | 17 | - |
| exon-intron | HNRNPDL | 4 | - | SKAP2 | 7 | - |
| exon-intron | HNRNPDL | 4 | - | BMX | X | + |
| exon-intron | HNRNPF | 10 | - | LINC02309 | 14 | + |
| exon-exon | HNRNPK | 9 | - | HNRNPKP4 | 3 | + |
| exon-intron | HNRNPL | 19 | - | C8orf37-AS1 | 8 | + |
| exon-intron | HNRNPL | 19 | - | HNRNPLP2 | 15 | - |
| exon-intron | HNRNPL | 19 | - | HNRNPLP2 | 15 | - |
| exon-exon | HNRNPU | 1 | - | COX20 | 1 | - |
| exon-intron | HNRNPUL2 | 11 | - | HNRNPUL2-BSCL2 | 11 | - |
| intron-exon | HNRNPUL2-BSCL2 | 11 | + | YY1AP1 | 1 | - |
| exon-exon | HNRNPUL2-BSCL2 | 11 | - | RPL22L1 | 3 | - |
| exon-exon | HNRNPUP1 | 14 | + | HNRNPU | 1 | - |
| exon-exon | HOOK2 | 19 | + | ND2 | MT | + |
| exon-exon | HORMAD2 | 22 | - | HORMAD2-AS1 | 22 | - |
| exon-intron | HORMAD2 | 22 | - | HORMAD2-AS1 | 22 | - |
| exon-intron | HORMAD2 | 22 | - | HORMAD2-AS1 | 22 | - |
| exon-exon | HORMAD2 | 22 | - | HORMAD2-AS1 | 22 | - |
| intron-exon | HORMAD2-AS1 | 22 | - | MTMR3 | 22 | - |
| intron-exon | HOXA10 | 7 | - | HOXA9 | 7 | - |
| exon-exon | HOXA10 | 7 | - | HOXA9 | 7 | - |
| exon-intron | HOXA10-HOXA9 | 7 | + | LOC107197952 | 7 | + |
| exon-intron | HOXA10-HOXA9 | 7 | + | LOC107197952 | 7 | + |
| exon-intron | HOXA10-HOXA9 | 7 | + | LOC107197952 | 7 | + |
| exon-intron | HOXA10-HOXA9 | 7 | + | LOC107197952 | 7 | + |
| exon-exon | HOXA10-HOXA9 | 7 | + | HOXA10-HOXA9 | 7 | + |
| intron-exon | HOXA3 | 7 | + | HOXA-AS2 | 7 | + |
| intron-exon | HOXA3 | 7 | + | HOXA-AS3 | 7 | + |
| intron-exon | HOXB3 | 17 | - | HOXB-AS1 | 17 | - |
| intron-exon | HOXB3 | 17 | - | HOXB-AS1 | 17 | - |
| intron-exon | HOXB6 | 17 | - | HOXB5 | 17 | - |
| intron-exon | HOXB6 | 17 | - | HOXB-AS3 | 17 | - |
| intron-exon | HOXB6 | 17 | - | HOXB5 | 17 | - |
| intron-exon | HOXB6 | 17 | - | HOXB5 | 17 | - |
| intron-exon | HOXC13-AS | 12 | + | HOXC13 | 12 | + |
| intron-exon | HOXC4 | 12 | - | HOXC-AS2 | 12 | - |
| exon-exon | HOXD-AS2 | 2 | + | LOC401021 | 2 | + |
| exon-intron | HOXD10 | 2 | - | HOXD11 | 2 | - |
| exon-intron | HOXD10 | 2 | - | HOXD11 | 2 | - |
| exon-exon | HOXD10 | 2 | - | HOXD11 | 2 | - |
| exon-intron | HOXD11 | 2 | + | HOXD10 | 2 | + |
| exon-exon | HOXD11 | 2 | + | HOXD10 | 2 | + |
| exon-exon | HP1BP3 | 1 | - | LOC112268222 | 1 | - |
| intron-exon | HPCA | 1 | + | TMEM54 | 1 | + |
| exon-intron | HPF1 | 4 | - | HCFC2 | 12 | - |
| intron-exon | HPGDS | 4 | + | PDLIM5 | 4 | + |
| intron-exon | HPN-AS1 | 19 | - | HPN | 19 | - |
| exon-exon | HPS3 | 3 | + | HOOK1 | 1 | - |
| exon-exon | HPS5 | 11 | + | GTF2H1 | 11 | + |
| exon-exon | HPS6 | 10 | - | CALN1 | 7 | + |
| exon-intron | HPX | 11 | - | PRPF6 | 20 | - |
| exon-exon | HRAT92 | 7 | - | PDGFA | 7 | - |
| exon-intron | HRG | 3 | + | PPP3CA | 4 | - |
| exon-intron | HRK | 12 | + | WNK1 | 12 | - |
| intron-exon | HSD11B1-AS1 | 1 | + | G0S2 | 1 | + |
| exon-intron | HSD11B1L | 19 | + | RPL36 | 19 | + |
| exon-exon | HSD11B2 | 16 | + | SLC39A1 | 1 | - |
| exon-exon | HSD17B3 | 9 | + | HSD17B3-AS1 | 9 | + |
| intron-exon | HSD17B6 | 12 | + | SYNGR2 | 17 | - |
| exon-exon | HSD3BP2 | 1 | + | HSD3B1 | 1 | + |
| exon-intron | HSDL1 | 16 | - | LOC105376731 | 15 | + |
| intron-exon | HSDL2 | 9 | + | C9orf147 | 9 | + |
| exon-intron | HSF1 | 8 | + | BAIAP2L1 | 7 | - |
| exon-intron | HSF1 | 8 | + | DGAT1 | 8 | + |
| exon-exon | HSF1 | 8 | - | HSF1 | 8 | + |
| exon-intron | HSF4 | 16 | + | LOC112267968 | 6 | - |
| exon-exon | HSF4 | 16 | - | FBXL8 | 16 | - |
| exon-exon | HSF4 | 16 | - | FBXL8 | 16 | - |
| exon-exon | HSFX4 | X | + | EOLA1 | X | - |
| exon-exon | HSP90AA1 | 14 | + | HSP90AB1 | 6 | - |
| exon-exon | HSP90AA1 | 14 | + | ANP32A | 15 | - |
| exon-exon | HSP90AA1 | 14 | + | LOC645139 | 17 | - |
| exon-exon | HSP90AA1 | 14 | + | PAIP1 | 5 | + |
| exon-exon | HSP90AB1 | 6 | + | HSP90AB3P | 4 | + |
| intron-exon | HSP90B1 | 12 | + | WASF2 | 1 | - |
| intron-exon | HSP90B1 | 12 | + | HSP90B1 | 12 | - |
| exon-exon | HSPA13 | 21 | - | CCDC88C | 14 | - |
| intron-exon | HSPA14 | 10 | - | CDNF | 10 | - |
| exon-exon | HSPA1A | 6 | - | HSPA1L | 6 | - |
| exon-exon | HSPA1A | 6 | - | TARDBP | 1 | + |
| exon-exon | HSPA1A | 6 | - | HSPA1B | 6 | - |
| exon-exon | HSPA1A | 6 | - | TARDBP | 1 | + |
| exon-exon | HSPA1L | 6 | + | HSPA1B | 6 | + |
| exon-exon | HSPA8 | 11 | + | EIF4EP2 | 17 | - |
| exon-intron | HSPA8P8 | 7 | + | MLLT1 | 19 | + |
| exon-intron | HSPA9 | 5 | + | LOC105379193 | 5 | + |
| exon-exon | HSPA9 | 5 | - | HSPA9P1 | 2 | - |
| exon-intron | HSPB1 | 7 | - | LOC112268284 | 21 | - |
| exon-exon | HSPB2-C11orf52 | 11 | - | HSPB2-C11orf52 | 11 | - |
| intron-exon | HSPB7 | 1 | + | CLCNKA | 1 | + |
| exon-exon | HSPB8 | 12 | + | LOC105370026 | 12 | + |
| exon-exon | HSPBP1 | 19 | - | SF3B2 | 11 | + |
| intron-exon | HSPD1 | 2 | + | HSPE1P2 | 14 | + |
| exon-intron | HSPD1 | 2 | - | ROCK2 | 2 | - |
| exon-exon | HSPE1 | 2 | + | MOB4 | 2 | + |
| intron-exon | HSPE1-MOB4 | 2 | - | HSPD1 | 2 | - |
| intron-exon | HSPE1-MOB4 | 2 | - | HSPD1 | 2 | - |
| intron-exon | HSPG2 | 1 | + | HSPG2 | 1 | - |
| exon-intron | HTATIP2 | 11 | + | ARHGAP27 | 17 | - |
| exon-exon | HTATSF1P2 | 6 | - | NQO2 | 6 | - |
| exon-exon | HTATSF1P2 | 6 | - | NQO2 | 6 | - |
| exon-exon | HTATSF1P2 | 6 | - | NQO2 | 6 | - |
| intron-exon | HTR5BP | 2 | + | CCDC93 | 2 | + |
| exon-exon | HTRA2 | 2 | - | AUP1 | 2 | - |
| exon-exon | HTRA2 | 2 | - | AUP1 | 2 | - |
| exon-exon | HTRA2 | 2 | - | AUP1 | 2 | - |
| exon-exon | HTRA2 | 2 | - | AUP1 | 2 | - |
| exon-exon | HTRA2 | 2 | - | AUP1 | 2 | - |
| exon-exon | HTRA2 | 2 | - | AUP1 | 2 | - |
| exon-exon | HTRA2 | 2 | - | AUP1 | 2 | - |
| exon-exon | HTRA2 | 2 | - | AUP1 | 2 | - |
| exon-exon | HTRA2 | 2 | - | AUP1 | 2 | - |
| exon-exon | HTT | 4 | + | FASN | 17 | - |
| exon-exon | HVCN1 | 12 | - | TCTN1 | 12 | - |
| intron-exon | HVCN1 | 12 | - | TCTN1 | 12 | - |
| exon-exon | HYI | 1 | - | SZT2 | 1 | - |
| intron-exon | HYI-AS1 | 1 | - | HYI | 1 | - |
| exon-exon | HYPK | 15 | - | SERF2 | 15 | - |
| exon-exon | ICAM2 | 17 | + | ENO1 | 1 | - |
| exon-intron | ID1 | 20 | + | MARCHF3 | 5 | + |
| exon-exon | ID2-AS1 | 2 | + | ID2 | 2 | + |
| exon-exon | ID2-AS1 | 2 | + | ID2 | 2 | + |
| intron-exon | IDH1-AS1 | 2 | - | IDH1 | 2 | - |
| intron-exon | IDH1-AS1 | 2 | - | IDH1 | 2 | - |
| intron-exon | IDH1-AS1 | 2 | - | IDH1 | 2 | - |
| intron-exon | IDH1-AS1 | 2 | - | IDH1 | 2 | - |
| intron-exon | IDH1-AS1 | 2 | - | IDH1 | 2 | - |
| intron-exon | IDH1-AS1 | 2 | - | IDH1 | 2 | - |
| intron-exon | IDH1-AS1 | 2 | - | IDH1 | 2 | - |
| intron-exon | IDH1-AS1 | 2 | - | IDH1 | 2 | - |
| intron-exon | IDH1-AS1 | 2 | - | IDH1 | 2 | - |
| exon-intron | IDH2 | 15 | - | PSPC1 | 13 | + |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| exon-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| exon-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| exon-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| intron-exon | IDH2-DT | 15 | - | IDH2 | 15 | - |
| exon-exon | IDH3B | 20 | - | NOP56 | 20 | - |
| exon-exon | IDI1 | 10 | + | WDR37 | 10 | + |
| exon-exon | IDO1 | 8 | - | EEF1A1 | 6 | - |
| exon-exon | IDO1 | 8 | - | EEF1A1 | 6 | - |
| exon-exon | IDO1 | 8 | - | EEF1A1P6 | 7 | - |
| exon-exon | IDO1 | 8 | - | EEF1A1P6 | 7 | - |
| exon-exon | IDS | X | + | AFMID | 17 | - |
| exon-intron | IDS | X | + | PIEZO2 | 18 | + |
| exon-intron | IDS | X | + | LOC106050102 | X | + |
| exon-exon | IDS | X | - | LINC00893 | X | + |
| intron-exon | IDS2 | X | - | IDS | X | - |
| exon-exon | IER2 | 19 | - | ATP6 | MT | - |
| exon-exon | IER3-AS1 | 6 | + | IER3 | 6 | + |
| exon-intron | IER3-AS1 | 6 | + | MAML3 | 4 | - |
| exon-exon | IER3IP1 | 18 | - | HDHD2 | 18 | - |
| exon-exon | IER3IP1 | 18 | - | HDHD2 | 18 | - |
| exon-exon | IER3IP1 | 18 | - | HDHD2 | 18 | - |
| exon-exon | IER3IP1 | 18 | - | HDHD2 | 18 | - |
| exon-exon | IER5L | 9 | + | LOC105376289 | 9 | + |
| exon-intron | IFI6 | 1 | + | RPS29 | 14 | - |
| exon-intron | IFITM1 | 11 | - | CRIM1 | 2 | - |
| exon-exon | IFITM2 | 11 | - | IFITM2 | 11 | + |
| exon-exon | IFITM3 | 11 | + | IFITM3 | 11 | - |
| exon-exon | IFNAR2 | 21 | + | IL10RB | 21 | + |
| exon-exon | IFNAR2 | 21 | + | IL10RB | 21 | + |
| exon-intron | IFNAR2 | 21 | + | IL10RB-DT | 21 | + |
| exon-exon | IFRD1 | 7 | + | LSMEM1 | 7 | + |
| exon-exon | IFRD2 | 3 | - | LSMEM2 | 3 | - |
| intron-exon | IFT46 | 11 | - | TMEM25 | 11 | - |
| exon-exon | IFT52 | 20 | - | IFT52 | 20 | + |
| exon-exon | IFT88 | 13 | - | LOC105370103 | 13 | - |
| exon-exon | IFT88 | 13 | - | LOC105370103 | 13 | - |
| exon-exon | IFTAP | 11 | + | LOC107984325 | 11 | + |
| exon-exon | IGF2 | 11 | + | INS-IGF2 | 11 | + |
| intron-exon | IGF2BP3 | 7 | + | F11R | 1 | - |
| intron-exon | IGF2BP3 | 7 | - | IGFBP7 | 4 | - |
| exon-intron | IGFALS | 16 | - | LOC102724066 | 16 | - |
| exon-intron | IGFALS | 16 | - | LOC102724066 | 16 | - |
| exon-intron | IGFALS | 16 | - | LOC102724066 | 16 | - |
| exon-intron | IGFALS | 16 | - | LOC102724066 | 16 | - |
| exon-intron | IGFALS | 16 | - | LOC102724066 | 16 | - |
| exon-intron | IGFALS | 16 | - | LOC102724066 | 16 | - |
| exon-intron | IGFALS | 16 | - | LOC102724066 | 16 | - |
| exon-intron | IGFALS | 16 | - | LOC102724066 | 16 | - |
| exon-intron | IGFALS | 16 | - | LOC102724066 | 16 | - |
| exon-intron | IGFALS | 16 | - | LOC102724066 | 16 | - |
| exon-intron | IGFALS | 16 | - | LOC102724066 | 16 | - |
| exon-intron | IGFALS | 16 | - | LOC102724066 | 16 | - |
| exon-intron | IGFALS | 16 | - | LOC102724066 | 16 | - |
| exon-intron | IGFALS | 16 | - | LOC102724066 | 16 | - |
| exon-intron | IGFALS | 16 | - | LOC102724066 | 16 | - |
| exon-intron | IGFBP1 | 7 | + | AP000547.2 | 22 | + |
| exon-intron | IGFBP1 | 7 | + | DNAJC17 | 15 | + |
| exon-intron | IGFBP1 | 7 | - | LOC105378789 | 1 | - |
| exon-exon | IGFBP3 | 7 | + | ANTXR2 | 4 | + |
| exon-exon | IGFBP3 | 7 | - | DPP7 | 9 | - |
| exon-exon | IGFBP4 | 17 | + | IGFBP4 | 17 | - |
| exon-exon | IGFBP7 | 4 | + | IGFBP7-AS1 | 4 | + |
| exon-exon | IGFBP7 | 4 | + | IGFBP7-AS1 | 4 | + |
| exon-exon | IGFBP7 | 4 | + | IGFBP7-AS1 | 4 | + |
| exon-exon | IGFBP7 | 4 | + | IGFBP7-AS1 | 4 | + |
| exon-exon | IGFBP7 | 4 | + | IGFBP7-AS1 | 4 | + |
| exon-intron | IGFBP7 | 4 | + | IGFBP7-AS1 | 4 | + |
| exon-exon | IGFBP7 | 4 | - | POLR2B | 4 | - |
| exon-intron | IGFBP7 | 4 | - | POLR2B | 4 | - |
| exon-exon | IGFBP7 | 4 | - | POLR2B | 4 | - |
| exon-intron | IGFBP7 | 4 | - | POLR2B | 4 | - |
| exon-intron | IGFBP7 | 4 | - | POLR2B | 4 | - |
| exon-exon | IGFBP7 | 4 | - | POLR2B | 4 | - |
| exon-exon | IGFBP7 | 4 | - | POLR2B | 4 | - |
| intron-exon | IGFBP7-AS1 | 4 | - | IGFBP7 | 4 | - |
| intron-exon | IGFL2-AS1 | 19 | - | IGFL2 | 19 | - |
| exon-intron | IGFLR1 | 19 | + | U2AF1L4 | 19 | + |
| exon-exon | IGFLR1 | 19 | - | KMT2B | 19 | - |
| intron-exon | IGH | 14 | + | IGHA2 | 14 | + |
| intron-exon | IGH | 14 | + | IGHA2 | 14 | + |
| intron-exon | IGH | 14 | + | IGHA2 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG4 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG4 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG4 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG4 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG2 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG2 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG2 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG3 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG2 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG3 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHA1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHA1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHA1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHA1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHA1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHA1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHA1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHA1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHA1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHA1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHA1 | 14 | + |
| intron-exon | IGH | 14 | + | RNA45SN1 | 21 | - |
| intron-exon | IGH | 14 | + | IGHA1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHA1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHA1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHA1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHA1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHA1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHA1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHA1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHA1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHA1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG2 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG2 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG2 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG2 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG1 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG2 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG2 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG3 | 14 | + |
| intron-exon | IGH | 14 | + | IGHG2 | 14 | + |
| intron-exon | IGH | 14 | + | IGHD | 14 | + |
| intron-exon | IGH | 14 | + | IGHM | 14 | + |
| intron-exon | IGH | 14 | + | IGHM | 14 | + |
| intron-exon | IGH | 14 | + | IGHM | 14 | + |
| intron-exon | IGH | 14 | + | IGHM | 14 | + |
| intron-exon | IGH | 14 | + | FAM30A | 14 | + |
| intron-exon | IGH | 14 | + | LOC107984634 | 14 | + |
| intron-exon | IGH | 14 | + | IGHV3-11 | 14 | + |
| intron-exon | IGH | 14 | + | LOC105370700 | 14 | + |
| intron-exon | IGH | 14 | - | IGHA2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHA2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHA2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHA2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHA2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHE | 14 | - |
| intron-exon | IGH | 14 | - | IGHG2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHM | 14 | - |
| intron-exon | IGH | 14 | - | IGHG2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHA1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHA1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHA1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHA1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHA1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHA1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHA1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHA1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHA1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHA1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHA1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHA1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHA1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHA1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHA1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHA1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHA1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHA1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHA1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHA1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHA1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHA1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHA1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHA1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHA1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHA1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHM | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHM | 14 | - |
| intron-exon | IGH | 14 | - | IGHM | 14 | - |
| intron-exon | IGH | 14 | - | IGHG3 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG3 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG3 | 14 | - |
| intron-exon | IGH | 14 | - | IGHM | 14 | - |
| intron-exon | IGH | 14 | - | IGHG3 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG3 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG3 | 14 | - |
| intron-exon | IGH | 14 | - | IGHM | 14 | - |
| intron-exon | IGH | 14 | - | IGHM | 14 | - |
| intron-exon | IGH | 14 | - | IGHM | 14 | - |
| intron-exon | IGH | 14 | - | IGHM | 14 | - |
| intron-exon | IGH | 14 | - | IGHM | 14 | - |
| intron-exon | IGH | 14 | - | IGHM | 14 | - |
| intron-exon | IGH | 14 | - | IGHA1 | 14 | - |
| intron-exon | IGH | 14 | - | BCL7A | 12 | - |
| intron-exon | IGH | 14 | - | IGHD | 14 | - |
| intron-exon | IGH | 14 | - | IGHM | 14 | - |
| intron-exon | IGH | 14 | - | IGHA1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV6-1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV6-1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV6-1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV6-1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV6-1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV6-1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV6-1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV6-1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV6-1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV6-1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHD | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-3 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-3 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-3 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-3 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-3 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-3 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-3 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-3 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-3 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-3 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-3 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-3 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-3 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-3 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-3 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-3 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-3 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-3 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-3 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-3 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-3 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-3 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-3 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-3 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-3 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-3 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV7-4-1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV7-4-1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV7-4-1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV7-4-1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV7-4-1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV7-4-1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV7-4-1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV7-4-1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV7-4-1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV7-4-1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV7-4-1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV7-4-1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV7-4-1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV7-4-1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV7-4-1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV7-4-1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV7-4-1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV7-4-1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV7-4-1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV7-4-1 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-5 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-5 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-5 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-5 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-5 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-5 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-5 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-5 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-5 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-5 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-5 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-5 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-5 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-5 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-5 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-5 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-5 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-5 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-5 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-5 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-5 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-5 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-5 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-5 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-5 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-5 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-5 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-5 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-5 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-7 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-7 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-7 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-7 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-7 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-7 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-7 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-7 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-7 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-7 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-7 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-7 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-7 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-7 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-7 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-7 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-7 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-7 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-7 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-7 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-7 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-7 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-7 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-7 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-7 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-7 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-7 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-64D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-64D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-64D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-64D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-64D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-64D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-64D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-11 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-11 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-11 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-11 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-11 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-11 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-11 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-11 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-11 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-11 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-11 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-11 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-11 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-13 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-13 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-15 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-15 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-15 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-15 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-15 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-15 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-15 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-15 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-15 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-15 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-15 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-15 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-15 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-15 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-15 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-15 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-15 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-17 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-18 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-18 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-18 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-18 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-18 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-18 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-18 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-18 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-18 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-18 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-18 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-18 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-18 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-18 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-18 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-18 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-18 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-18 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-18 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-18 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-18 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-18 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-18 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-18 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-18 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-18 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-20 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-20 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-20 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-20 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-20 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-20 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-20 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-21 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-21 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-21 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-21 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-21 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-21 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-21 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-21 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-21 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-21 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-21 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-21 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-21 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-21 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-21 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-21 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-21 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-21 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-21 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-21 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-21 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-21 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-21 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-21 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-21 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-21 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-21 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-21 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-24 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-24 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-24 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-24 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-24 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-24 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-24 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-24 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-24 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-24 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-24 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-26 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-26 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-26 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-26 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-26 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-26 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-26 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-26 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-26 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-28 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-28 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-28 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-28 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-28 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-28 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-28 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-28 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-4 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-28 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-28 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-33 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-33 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-33 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-33 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-33 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-33 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-33 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-30-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-30-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-30-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-30-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-30-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-30-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-30-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-30-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-30-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-30-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-30-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-30-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-30-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-30-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-30-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-30-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-30-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-30-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-30-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-30-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-61 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-61 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-30-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-30-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-30-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-30-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-30-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-30-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-30-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-30-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-30-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-30-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-33 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-33 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-33 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-33 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-33 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-33 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-33 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-33 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-30 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-33 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-33 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-33 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-33 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-33 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-33 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-33 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-33 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-33 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-33 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-33 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-34 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-34 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-34 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-34 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-34 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-34 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-34 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-34 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-34 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-34 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-34 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-34 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-34 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-34 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-34 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-34 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-34 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-34 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-34 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-34 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-34 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-34 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-34 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-34 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-34 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-34 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-34 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-34 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-34 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-34 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-34 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-34 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHG3 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-43 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-43 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-43 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-43 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-43 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-43 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-45 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-45 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-46 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-46 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-46 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-46 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-46 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-46 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-46 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-46 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-46 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-46 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-46 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-46 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-46 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-21 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-48 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-21 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-21 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-21 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-21 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-21 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-21 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-21 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-21 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-48 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-48 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-48 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-48 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-48 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-48 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-48 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-21 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-49 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-49 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-49 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-49 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-43 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-43 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-49 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-49 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-49 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-49 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-49 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-49 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-49 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV5-51 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV5-51 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV5-51 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV5-51 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV5-51 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV5-51 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV5-51 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV5-51 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV5-51 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV5-51 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV5-51 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV5-51 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV5-51 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV5-51 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV5-51 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV5-51 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV5-51 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV5-51 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV5-51 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV5-51 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-53 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-53 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-53 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-53 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-53 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-53 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-66 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-23 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-53 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-53 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-53 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-53 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-66 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-53 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-58 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-58 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-58 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-61 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-61 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-61 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-61 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-30-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-61 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-30-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-30-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-61 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-61 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-61 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-61 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-30-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-61 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-30-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-39 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-61 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-61 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-61 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-59 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-61 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-61 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV4-61 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-66 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-66 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-66 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-70D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-70D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69-2 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-70 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-70 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-70 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-70 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-70 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-70 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-70 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-70 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV2-70D | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-72 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-72 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-72 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-72 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-72 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-73 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-73 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-73 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-73 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-73 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-73 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-73 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-74 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-74 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-74 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-74 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-74 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-74 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-74 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-73 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-73 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV3-74 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV1-69 | 14 | - |
| intron-exon | IGH | 14 | - | IGHV7-81 | 14 | - |
| exon-exon | IGHG1 | 14 | + | IGHG3 | 14 | + |
| exon-exon | IGHG1 | 14 | + | IGHG3 | 14 | + |
| exon-exon | IGHG1 | 14 | + | IGHG3 | 14 | + |
| exon-exon | IGHG1 | 14 | + | IGHJ2 | 14 | + |
| exon-intron | IGHG1 | 14 | - | IGH | 14 | - |
| exon-intron | IGHG1 | 14 | - | IGH | 14 | - |
| exon-intron | IGHG1 | 14 | - | IGHGP | 14 | - |
| exon-intron | IGHG1 | 14 | - | IGH | 14 | - |
| exon-intron | IGHG1 | 14 | - | IGH | 14 | - |
| exon-intron | IGHG1 | 14 | - | IGH | 14 | - |
| exon-intron | IGHG1 | 14 | - | IGH | 14 | - |
| exon-intron | IGHG1 | 14 | - | IGH | 14 | - |
| exon-intron | IGHG1 | 14 | - | IGH | 14 | - |
| exon-intron | IGHG1 | 14 | - | IGH | 14 | - |
| exon-intron | IGHG1 | 14 | - | IGH | 14 | - |
| exon-intron | IGHG1 | 14 | - | IGH | 14 | - |
| exon-exon | IGHG1 | 14 | - | IGHG2 | 14 | - |
| exon-intron | IGHG1 | 14 | - | IGHGP | 14 | - |
| exon-intron | IGHG1 | 14 | - | IGH | 14 | - |
| exon-intron | IGHG1 | 14 | - | IGH | 14 | - |
| exon-exon | IGHG1 | 14 | - | IGHG2 | 14 | - |
| exon-intron | IGHG1 | 14 | - | IGH | 14 | - |
| exon-exon | IGHG1 | 14 | - | IGHG2 | 14 | - |
| exon-exon | IGHG1 | 14 | - | IGHG4 | 14 | - |
| exon-intron | IGHG1 | 14 | - | IGH | 14 | - |
| exon-intron | IGHG1 | 14 | - | IGH | 14 | - |
| exon-exon | IGHG2 | 14 | + | IGHG1 | 14 | + |
| exon-exon | IGHG2 | 14 | + | IGHG3 | 14 | + |
| exon-intron | IGHG2 | 14 | + | IGH | 14 | + |
| exon-intron | IGHG2 | 14 | - | IGH | 14 | - |
| exon-intron | IGHG2 | 14 | - | IGH | 14 | - |
| exon-exon | IGHG2 | 14 | - | IGHG4 | 14 | - |
| exon-intron | IGHG2 | 14 | - | IGH | 14 | - |
| exon-intron | IGHG2 | 14 | - | IGH | 14 | - |
| exon-intron | IGHG2 | 14 | - | IGH | 14 | - |
| exon-intron | IGHG2 | 14 | - | IGH | 14 | - |
| exon-exon | IGHG2 | 14 | - | IGHG4 | 14 | - |
| exon-exon | IGHG3 | 14 | - | IGHGP | 14 | - |
| exon-exon | IGHG3 | 14 | - | IGHGP | 14 | - |
| exon-intron | IGHG3 | 14 | - | IGHG1 | 14 | - |
| exon-intron | IGHG3 | 14 | - | IGH | 14 | - |
| exon-intron | IGHG3 | 14 | - | IGH | 14 | - |
| exon-intron | IGHG3 | 14 | - | IGH | 14 | - |
| exon-intron | IGHG3 | 14 | - | IGH | 14 | - |
| exon-intron | IGHG3 | 14 | - | IGH | 14 | - |
| exon-intron | IGHG3 | 14 | - | IGH | 14 | - |
| exon-intron | IGHG3 | 14 | - | IGH | 14 | - |
| exon-intron | IGHG3 | 14 | - | IGH | 14 | - |
| exon-exon | IGHG3 | 14 | - | IGHG1 | 14 | - |
| exon-exon | IGHG3 | 14 | - | IGHGP | 14 | - |
| exon-exon | IGHG3 | 14 | - | IGHGP | 14 | - |
| exon-exon | IGHG3 | 14 | - | IGHGP | 14 | - |
| exon-exon | IGHG4 | 14 | + | IGHG1 | 14 | + |
| exon-exon | IGHG4 | 14 | + | IGHG2 | 14 | + |
| exon-exon | IGHG4 | 14 | + | IGHG1 | 14 | + |
| exon-intron | IGHG4 | 14 | - | IGH | 14 | - |
| exon-intron | IGHG4 | 14 | - | IGH | 14 | - |
| exon-intron | IGHGP | 14 | - | IGH | 14 | - |
| exon-intron | IGHGP | 14 | - | IGH | 14 | - |
| exon-intron | IGHGP | 14 | - | IGH | 14 | - |
| exon-intron | IGHGP | 14 | - | IGH | 14 | - |
| exon-intron | IGHGP | 14 | - | IGH | 14 | - |
| exon-exon | IGHGP | 14 | - | IGHG2 | 14 | - |
| exon-exon | IGHGP | 14 | - | IGHG4 | 14 | - |
| exon-exon | IGHGP | 14 | - | IGHG3 | 14 | - |
| exon-exon | IGHJ2 | 14 | - | IGHG1 | 14 | - |
| exon-intron | IGHJ2P | 14 | - | CASC11 | 8 | - |
| exon-exon | IGHJ3 | 14 | - | IGHA1 | 14 | - |
| exon-exon | IGHJ3 | 14 | - | IGHA1 | 14 | - |
| exon-exon | IGHJ3 | 14 | - | IGHA1 | 14 | - |
| exon-exon | IGHJ3 | 14 | - | IGHG1 | 14 | - |
| exon-exon | IGHJ3 | 14 | - | IGHG1 | 14 | - |
| exon-exon | IGHJ3 | 14 | - | IGHG1 | 14 | - |
| exon-exon | IGHJ3 | 14 | - | IGHM | 14 | - |
| exon-exon | IGHJ3 | 14 | - | IGHM | 14 | - |
| exon-exon | IGHJ3 | 14 | - | IGHM | 14 | - |
| exon-exon | IGHJ5 | 14 | - | IGHG2 | 14 | - |
| exon-exon | IGHJ5 | 14 | - | IGHG2 | 14 | - |
| exon-exon | IGHJ5 | 14 | - | IGHG2 | 14 | - |
| exon-exon | IGHJ6 | 14 | - | IGHG1 | 14 | - |
| exon-exon | IGHJ6 | 14 | - | IGHG1 | 14 | - |
| exon-exon | IGHJ6 | 14 | - | IGHG1 | 14 | - |
| exon-exon | IGHJ6 | 14 | - | IGHM | 14 | - |
| exon-exon | IGHJ6 | 14 | - | IGHM | 14 | - |
| exon-exon | IGHJ6 | 14 | - | IGHG1 | 14 | - |
| exon-exon | IGHJ6 | 14 | - | IGHM | 14 | - |
| exon-exon | IGHJ6 | 14 | - | IGHG1 | 14 | - |
| exon-exon | IGHJ6 | 14 | - | IGHG2 | 14 | - |
| exon-exon | IGHJ6 | 14 | - | IGHM | 14 | - |
| exon-exon | IGHJ6 | 14 | - | IGHM | 14 | - |
| exon-exon | IGHJ6 | 14 | - | IGHG1 | 14 | - |
| exon-intron | IGHJ6 | 14 | - | IGHA1 | 14 | - |
| exon-exon | IGHJ6 | 14 | - | IGHM | 14 | - |
| exon-exon | IGHM | 14 | + | IGHM | 14 | - |
| exon-exon | IGHV1-46 | 14 | - | IGHV1-24 | 14 | - |
| exon-exon | IGHV1-46 | 14 | - | IGHV1-24 | 14 | - |
| exon-exon | IGHV1-69 | 14 | - | IGHV1-58 | 14 | - |
| exon-exon | IGHV1-69-2 | 14 | - | IGHV1-69 | 14 | - |
| exon-exon | IGHV1-69-2 | 14 | - | IGHV1-69 | 14 | - |
| exon-exon | IGHV1-69-2 | 14 | - | IGHV1-69 | 14 | - |
| exon-exon | IGHV1OR15-1 | 15 | - | IGHG1 | 14 | - |
| exon-exon | IGHV1OR15-1 | 15 | - | IGHG1 | 14 | - |
| exon-exon | IGHV3-13 | 14 | - | IGHV3-11 | 14 | - |
| exon-exon | IGHV3-13 | 14 | - | IGHV3-11 | 14 | - |
| exon-exon | IGHV3-13 | 14 | - | IGHV3-11 | 14 | - |
| exon-exon | IGHV3-21 | 14 | - | IGLV2-14 | 22 | + |
| exon-exon | IGHV3-22 | 14 | - | IGHV3-21 | 14 | - |
| exon-exon | IGHV3-22 | 14 | - | IGHV3-21 | 14 | - |
| exon-exon | IGHV3-22 | 14 | - | IGHV3-21 | 14 | - |
| exon-exon | IGHV3-23 | 14 | - | IGHV3-21 | 14 | - |
| exon-exon | IGHV3-23 | 14 | - | IGHV3-11 | 14 | - |
| exon-exon | IGHV3-30 | 14 | - | IGHV3-11 | 14 | - |
| exon-intron | IGHV3-30 | 14 | - | IGH | 14 | - |
| exon-exon | IGHV3-33 | 14 | - | IGHJ5 | 14 | - |
| exon-exon | IGHV3-38 | 14 | - | IGHV3-7 | 14 | - |
| exon-exon | IGHV3-38 | 14 | - | IGHV3-33 | 14 | - |
| exon-intron | IGHV3-38 | 14 | - | IGH | 14 | - |
| exon-exon | IGHV3-38 | 14 | - | IGHV3-21 | 14 | - |
| exon-exon | IGHV3-38 | 14 | - | IGHV3-33 | 14 | - |
| exon-exon | IGHV3-41 | 14 | - | IGHV3-64D | 14 | - |
| exon-intron | IGHV3-52 | 14 | - | IGH | 14 | - |
| exon-exon | IGHV3-64 | 14 | - | IGHV3-23 | 14 | - |
| exon-exon | IGHV3-64D | 14 | - | IGHV3-7 | 14 | - |
| exon-exon | IGHV3-64D | 14 | - | IGHV3-7 | 14 | - |
| exon-exon | IGHV3-66 | 14 | - | IGHV3-23 | 14 | - |
| exon-exon | IGHV3-69-1 | 14 | - | IGHV3-53 | 14 | - |
| exon-exon | IGHV3-69-1 | 14 | - | IGHV3-53 | 14 | - |
| exon-exon | IGHV3-69-1 | 14 | - | IGHV3-48 | 14 | - |
| exon-exon | IGHV3-69-1 | 14 | - | IGHV3-48 | 14 | - |
| exon-exon | IGHV3-69-1 | 14 | - | IGHV3-48 | 14 | - |
| exon-exon | IGHV3-69-1 | 14 | - | IGHV3-48 | 14 | - |
| exon-exon | IGHV3-71 | 14 | - | IGHV3-48 | 14 | - |
| exon-intron | IGHV3-71 | 14 | - | IGH | 14 | - |
| exon-exon | IGHV3-71 | 14 | - | IGHV3-48 | 14 | - |
| exon-exon | IGHV3-71 | 14 | - | IGHV3-48 | 14 | - |
| exon-exon | IGHV3-71 | 14 | - | IGHV3-48 | 14 | - |
| exon-exon | IGHV3-71 | 14 | - | IGHV3-48 | 14 | - |
| exon-exon | IGHV3-71 | 14 | - | IGHV3-48 | 14 | - |
| exon-intron | IGHV3-73 | 14 | + | IGHV3OR16-13 | 16 | - |
| exon-exon | IGHV3-74 | 14 | - | IGHV3-71 | 14 | - |
| exon-exon | IGHV4-28 | 14 | - | IGHV4-4 | 14 | - |
| exon-exon | IGHV4-28 | 14 | - | IGHV4-4 | 14 | - |
| exon-exon | IGHV4-28 | 14 | - | IGHV4-4 | 14 | - |
| exon-exon | IGHV4-28 | 14 | - | IGHV4-4 | 14 | - |
| exon-exon | IGHV4-28 | 14 | - | IGHV4-4 | 14 | - |
| exon-exon | IGHV4-30-2 | 14 | - | IGHV4-4 | 14 | - |
| exon-exon | IGHV4-30-2 | 14 | - | IGHV4-4 | 14 | - |
| exon-exon | IGHV4-30-2 | 14 | - | IGHV4-4 | 14 | - |
| exon-exon | IGHV4-30-2 | 14 | - | IGHV4-4 | 14 | - |
| exon-exon | IGHV4-30-2 | 14 | - | IGHV4-4 | 14 | - |
| exon-exon | IGHV4-30-2 | 14 | - | IGHV4-4 | 14 | - |
| exon-exon | IGHV4-30-2 | 14 | - | IGHV4-28 | 14 | - |
| exon-exon | IGHV4-30-2 | 14 | - | IGHV4-4 | 14 | - |
| exon-exon | IGHV4-30-2 | 14 | - | IGHV4-4 | 14 | - |
| exon-exon | IGHV4-30-2 | 14 | - | IGHV4-4 | 14 | - |
| exon-exon | IGHV4-30-2 | 14 | - | IGHV4-4 | 14 | - |
| exon-exon | IGHV4-30-2 | 14 | - | IGHV4-4 | 14 | - |
| exon-exon | IGHV4-30-2 | 14 | - | IGHV4-4 | 14 | - |
| exon-exon | IGHV4-30-2 | 14 | - | IGHV4-4 | 14 | - |
| exon-exon | IGHV4-30-2 | 14 | - | IGHV4-4 | 14 | - |
| exon-exon | IGHV4-30-2 | 14 | - | IGHV4-4 | 14 | - |
| exon-exon | IGHV4-30-2 | 14 | - | IGHV4-4 | 14 | - |
| exon-exon | IGHV4-30-2 | 14 | - | IGHV4-4 | 14 | - |
| exon-exon | IGHV4-30-2 | 14 | - | IGHV4-4 | 14 | - |
| exon-exon | IGHV4-30-2 | 14 | - | IGHV4-4 | 14 | - |
| exon-exon | IGHV4-30-2 | 14 | - | IGHV4-4 | 14 | - |
| exon-exon | IGHV4-30-2 | 14 | - | IGHV4-4 | 14 | - |
| exon-exon | IGHV4-30-2 | 14 | - | IGHV4-4 | 14 | - |
| exon-exon | IGHV4-30-2 | 14 | - | IGHV4-4 | 14 | - |
| exon-exon | IGHV4-30-2 | 14 | - | IGHV4-4 | 14 | - |
| exon-exon | IGHV4-30-2 | 14 | - | IGHV4-4 | 14 | - |
| exon-exon | IGHV4-34 | 14 | - | IGHV4-4 | 14 | - |
| exon-exon | IGHV4-34 | 14 | - | IGHV4-4 | 14 | - |
| exon-exon | IGHV4-39 | 14 | - | IGHV4-4 | 14 | - |
| exon-exon | IGHV4-39 | 14 | - | IGHV4-4 | 14 | - |
| exon-exon | IGHV4-39 | 14 | - | IGHV4-34 | 14 | - |
| exon-intron | IGHV4-39 | 14 | - | IGH | 14 | - |
| exon-intron | IGHV4-39 | 14 | - | IGH | 14 | - |
| exon-exon | IGHV4-55 | 14 | - | IGHV4-34 | 14 | - |
| exon-exon | IGHV4-59 | 14 | - | IGHV4-28 | 14 | - |
| exon-exon | IGHV4-59 | 14 | - | IGHV4-30-2 | 14 | - |
| exon-exon | IGHV4-59 | 14 | - | LOC390714 | 16 | - |
| exon-exon | IGHV4-61 | 14 | - | IGHV4-39 | 14 | - |
| exon-exon | IGHV4-80 | 14 | - | IGHV4-39 | 14 | - |
| exon-intron | IGHV4-80 | 14 | - | IGH | 14 | - |
| intron-exon | IGK | 2 | + | IGKV4-1 | 2 | - |
| intron-exon | IGK | 2 | + | IGKV1-39 | 2 | - |
| intron-exon | IGK | 2 | + | IGKV1-39 | 2 | - |
| intron-exon | IGK | 2 | + | IGKV1-33 | 2 | - |
| intron-exon | IGK | 2 | + | IGKV2-30 | 2 | - |
| intron-exon | IGK | 2 | + | IGKV2-28 | 2 | - |
| intron-exon | IGK | 2 | + | IGKV2-30 | 2 | - |
| intron-exon | IGK | 2 | + | IGKV2-28 | 2 | - |
| intron-exon | IGK | 2 | + | IGKV2-28 | 2 | - |
| intron-exon | IGK | 2 | + | IGKV2-28 | 2 | - |
| intron-exon | IGK | 2 | + | IGKV2-28 | 2 | - |
| intron-exon | IGK | 2 | + | IGKV2-28 | 2 | - |
| intron-exon | IGK | 2 | + | IGKV2-28 | 2 | - |
| intron-exon | IGK | 2 | + | IGKV2-28 | 2 | - |
| intron-exon | IGK | 2 | + | IGKV2-28 | 2 | - |
| intron-exon | IGK | 2 | + | IGKV2-28 | 2 | - |
| intron-exon | IGK | 2 | + | IGKV2-28 | 2 | - |
| intron-exon | IGK | 2 | + | IGKV2-28 | 2 | - |
| intron-exon | IGK | 2 | + | IGKV2-28 | 2 | - |
| intron-exon | IGK | 2 | + | IGKV2-28 | 2 | - |
| intron-exon | IGK | 2 | + | IGKV2-28 | 2 | - |
| intron-exon | IGK | 2 | + | IGKV2-28 | 2 | - |
| intron-exon | IGK | 2 | + | IGKV2-28 | 2 | - |
| intron-exon | IGK | 2 | + | IGKV2-28 | 2 | - |
| intron-exon | IGK | 2 | + | IGKV1-27 | 2 | - |
| intron-exon | IGK | 2 | + | IGKV2-24 | 2 | - |
| intron-exon | IGK | 2 | + | IGKV3-20 | 2 | - |
| intron-exon | IGK | 2 | + | IGKV3-20 | 2 | - |
| intron-exon | IGK | 2 | + | IGKV3-20 | 2 | - |
| intron-exon | IGK | 2 | + | IGKV3-20 | 2 | - |
| intron-exon | IGK | 2 | + | IGKV3-15 | 2 | - |
| intron-exon | IGK | 2 | + | IGKV3-15 | 2 | - |
| intron-exon | IGK | 2 | + | IGKV3-15 | 2 | - |
| intron-exon | IGK | 2 | + | IGKV3-15 | 2 | - |
| intron-exon | IGK | 2 | + | IGKV3-15 | 2 | - |
| intron-exon | IGK | 2 | + | IGKV3-15 | 2 | - |
| intron-exon | IGK | 2 | + | IGKV1-12 | 2 | - |
| intron-exon | IGK | 2 | + | IGKV3-11 | 2 | - |
| intron-exon | IGK | 2 | + | IGKV3-11 | 2 | - |
| intron-exon | IGK | 2 | + | IGKV2-30 | 2 | - |
| intron-exon | IGK | 2 | - | IGKC | 2 | - |
| intron-exon | IGK | 2 | - | IGKC | 2 | - |
| intron-exon | IGK | 2 | - | IGKC | 2 | - |
| intron-exon | IGK | 2 | - | IGKC | 2 | - |
| intron-exon | IGK | 2 | - | IGKC | 2 | - |
| intron-exon | IGK | 2 | - | IGKC | 2 | - |
| intron-exon | IGK | 2 | - | IGKC | 2 | - |
| intron-exon | IGK | 2 | - | IGKC | 2 | - |
| intron-exon | IGK | 2 | - | IGKC | 2 | - |
| intron-exon | IGK | 2 | - | PNRC1 | 6 | + |
| intron-exon | IGKC | 2 | + | TALAM1 | 11 | - |
| exon-intron | IGKC | 2 | + | IGK | 2 | + |
| exon-intron | IGKC | 2 | + | IGK | 2 | + |
| exon-intron | IGKC | 2 | + | IGK | 2 | + |
| exon-intron | IGKC | 2 | + | IGK | 2 | + |
| exon-intron | IGKC | 2 | + | IGK | 2 | + |
| exon-intron | IGKC | 2 | + | IGK | 2 | + |
| exon-intron | IGKC | 2 | + | IGK | 2 | + |
| exon-intron | IGKC | 2 | + | IGK | 2 | + |
| exon-intron | IGKC | 2 | + | IGK | 2 | + |
| exon-intron | IGKC | 2 | + | IGK | 2 | + |
| exon-intron | IGKC | 2 | + | IGK | 2 | + |
| exon-intron | IGKC | 2 | + | IGK | 2 | + |
| exon-intron | IGKC | 2 | + | IGK | 2 | + |
| exon-intron | IGKC | 2 | + | IGK | 2 | + |
| exon-intron | IGKC | 2 | + | IGK | 2 | + |
| exon-intron | IGKC | 2 | + | IGK | 2 | + |
| exon-intron | IGKC | 2 | + | IGK | 2 | + |
| exon-intron | IGKC | 2 | + | IGK | 2 | + |
| exon-intron | IGKC | 2 | + | IGK | 2 | + |
| exon-intron | IGKC | 2 | + | IGK | 2 | + |
| exon-intron | IGKC | 2 | + | IGK | 2 | + |
| exon-intron | IGKC | 2 | + | IGK | 2 | + |
| exon-exon | IGKC | 2 | - | FHL3 | 1 | + |
| exon-intron | IGKC | 2 | - | AC244205.1 | 2 | - |
| exon-intron | IGKV1-12 | 2 | - | IGK | 2 | - |
| exon-intron | IGKV1-12 | 2 | - | IGK | 2 | - |
| exon-intron | IGKV1-12 | 2 | - | IGK | 2 | - |
| exon-intron | IGKV1-12 | 2 | - | IGK | 2 | - |
| exon-intron | IGKV1-12 | 2 | - | IGK | 2 | - |
| exon-exon | IGKV1-17 | 2 | - | IGKV1-8 | 2 | - |
| exon-intron | IGKV1-17 | 2 | - | IGK | 2 | - |
| exon-exon | IGKV1-27 | 2 | - | IGKV1-8 | 2 | - |
| exon-exon | IGKV1-27 | 2 | - | IGKV1-8 | 2 | - |
| exon-intron | IGKV1-27 | 2 | - | IGK | 2 | - |
| exon-intron | IGKV1-37 | 2 | - | IGK | 2 | - |
| exon-intron | IGKV1-37 | 2 | - | IGK | 2 | - |
| exon-intron | IGKV1-39 | 2 | - | IGK | 2 | - |
| exon-intron | IGKV1-39 | 2 | - | IGK | 2 | - |
| exon-intron | IGKV1-39 | 2 | - | IGK | 2 | - |
| exon-intron | IGKV1-39 | 2 | - | IGK | 2 | - |
| exon-intron | IGKV1-39 | 2 | - | IGK | 2 | - |
| exon-intron | IGKV1-5 | 2 | - | IGK | 2 | - |
| exon-intron | IGKV1-5 | 2 | - | IGK | 2 | - |
| exon-intron | IGKV1-5 | 2 | - | IGK | 2 | - |
| exon-intron | IGKV1-5 | 2 | - | IGK | 2 | - |
| exon-intron | IGKV1-5 | 2 | - | IGK | 2 | - |
| exon-exon | IGKV1-9 | 2 | - | IGKV1-5 | 2 | - |
| exon-intron | IGKV1-9 | 2 | - | IGK | 2 | - |
| exon-intron | IGKV1-9 | 2 | - | IGK | 2 | - |
| exon-intron | IGKV1-9 | 2 | - | IGK | 2 | - |
| exon-intron | IGKV1-9 | 2 | - | IGK | 2 | - |
| exon-exon | IGKV1D-27 | 2 | + | IGKV1D-17 | 2 | + |
| exon-exon | IGKV1D-27 | 2 | + | IGKV1D-17 | 2 | + |
| exon-exon | IGKV1D-27 | 2 | + | IGKV1D-8 | 2 | + |
| exon-intron | IGKV1D-27 | 2 | + | IGK | 2 | + |
| exon-intron | IGKV1D-27 | 2 | + | IGK | 2 | + |
| exon-intron | IGKV1D-39 | 2 | + | IGK | 2 | + |
| exon-intron | IGKV1D-39 | 2 | + | IGK | 2 | - |
| exon-intron | IGKV1D-39 | 2 | + | IGK | 2 | - |
| exon-intron | IGKV2-26 | 2 | - | IGK | 2 | - |
| exon-intron | IGKV2-28 | 2 | - | IGK | 2 | - |
| exon-intron | IGKV2D-28 | 2 | + | IGK | 2 | - |
| exon-intron | IGKV2D-28 | 2 | + | IGK | 2 | + |
| exon-intron | IGKV2D-28 | 2 | + | IGK | 2 | - |
| exon-intron | IGKV2D-28 | 2 | + | IGK | 2 | - |
| exon-intron | IGKV2D-28 | 2 | + | IGK | 2 | - |
| exon-intron | IGKV2D-28 | 2 | + | IGK | 2 | - |
| exon-intron | IGKV2D-28 | 2 | + | IGK | 2 | - |
| exon-intron | IGKV2D-28 | 2 | + | IGK | 2 | - |
| exon-intron | IGKV2D-28 | 2 | + | IGK | 2 | - |
| exon-intron | IGKV2D-30 | 2 | + | IGK | 2 | - |
| exon-intron | IGKV2D-30 | 2 | + | IGK | 2 | - |
| exon-intron | IGKV3-15 | 2 | - | IGK | 2 | - |
| exon-intron | IGKV3-15 | 2 | - | IGK | 2 | - |
| exon-intron | IGKV3-20 | 2 | - | IGK | 2 | - |
| exon-intron | IGKV3-20 | 2 | - | IGK | 2 | - |
| exon-intron | IGKV3-20 | 2 | - | IGK | 2 | - |
| exon-intron | IGKV3D-11 | 2 | + | IGK | 2 | - |
| exon-intron | IGKV3D-15 | 2 | + | IGK | 2 | - |
| exon-intron | IGKV3D-15 | 2 | + | IGK | 2 | - |
| exon-intron | IGKV3D-7 | 2 | + | IGK | 2 | - |
| exon-intron | IGKV3D-7 | 2 | + | IGK | 2 | - |
| intron-exon | IGL | 22 | + | IGLV1-47 | 22 | + |
| intron-exon | IGL | 22 | + | IGLV2-14 | 22 | + |
| intron-exon | IGL | 22 | + | IGLV2-18 | 22 | + |
| intron-exon | IGL | 22 | + | IGLV3-12 | 22 | + |
| intron-exon | IGL | 22 | + | IGLV3-1 | 22 | + |
| intron-exon | IGL | 22 | + | IGLV3-1 | 22 | + |
| intron-exon | IGL | 22 | + | IGLC2 | 22 | - |
| intron-exon | IGL | 22 | - | IGLC3 | 22 | - |
| exon-intron | IGLC2 | 22 | + | IGL | 22 | + |
| exon-intron | IGLC2 | 22 | + | IGL | 22 | + |
| exon-intron | IGLC2 | 22 | + | IGL | 22 | + |
| exon-intron | IGLC2 | 22 | + | IGL | 22 | + |
| exon-intron | IGLC2 | 22 | + | IGL | 22 | + |
| exon-intron | IGLC2 | 22 | + | IGL | 22 | + |
| exon-intron | IGLC2 | 22 | + | IGL | 22 | + |
| exon-intron | IGLC2 | 22 | + | IGL | 22 | + |
| exon-intron | IGLC2 | 22 | + | IGL | 22 | + |
| exon-intron | IGLC2 | 22 | + | IGL | 22 | + |
| exon-intron | IGLC2 | 22 | - | IGL | 22 | - |
| exon-intron | IGLC2 | 22 | - | IGL | 22 | - |
| exon-intron | IGLC2 | 22 | - | IGL | 22 | - |
| exon-intron | IGLC3 | 22 | + | IGL | 22 | + |
| exon-intron | IGLC3 | 22 | + | IGL | 22 | + |
| exon-intron | IGLC3 | 22 | + | IGL | 22 | + |
| exon-intron | IGLC3 | 22 | + | IGL | 22 | + |
| exon-intron | IGLC3 | 22 | + | IGL | 22 | + |
| exon-intron | IGLC3 | 22 | + | IGL | 22 | + |
| exon-intron | IGLC3 | 22 | + | IGL | 22 | + |
| exon-intron | IGLC3 | 22 | + | IGL | 22 | + |
| exon-intron | IGLC3 | 22 | + | IGL | 22 | + |
| exon-intron | IGLC3 | 22 | - | IGL | 22 | - |
| exon-exon | IGLL5 | 22 | + | IGLC2 | 22 | + |
| exon-intron | IGLL5 | 22 | + | IGL | 22 | + |
| exon-intron | IGLL5 | 22 | + | IGL | 22 | + |
| exon-intron | IGLL5 | 22 | + | IGL | 22 | + |
| exon-intron | IGLL5 | 22 | - | LOC105372948 | 22 | - |
| exon-intron | IGLL5 | 22 | - | LOC105372948 | 22 | - |
| exon-intron | IGLL5 | 22 | - | LOC105372948 | 22 | - |
| exon-intron | IGLL5 | 22 | - | LOC105372948 | 22 | - |
| exon-intron | IGLL5 | 22 | - | LOC105372948 | 22 | - |
| exon-intron | IGLL5 | 22 | - | LOC105372948 | 22 | - |
| exon-intron | IGLL5 | 22 | - | LOC105372948 | 22 | - |
| exon-intron | IGLL5 | 22 | - | LOC107985542 | 22 | - |
| exon-exon | IGLL5 | 22 | - | IGLV3-19 | 22 | - |
| exon-exon | IGLL5 | 22 | - | IGLV3-25 | 22 | - |
| exon-exon | IGLV1-40 | 22 | + | IGLV1-36 | 22 | + |
| exon-exon | IGLV1-40 | 22 | + | IGLL5 | 22 | + |
| exon-intron | IGLV1-40 | 22 | - | IGL | 22 | - |
| exon-exon | IGLV1-44 | 22 | + | IGLV2-14 | 22 | + |
| exon-intron | IGLV1-44 | 22 | + | IGL | 22 | + |
| exon-intron | IGLV1-44 | 22 | + | IGL | 22 | + |
| exon-intron | IGLV1-44 | 22 | + | IGL | 22 | + |
| exon-exon | IGLV1-44 | 22 | + | IGLL5 | 22 | + |
| exon-intron | IGLV1-44 | 22 | - | IGL | 22 | - |
| exon-exon | IGLV1-47 | 22 | + | IGLV1-36 | 22 | + |
| exon-exon | IGLV1-47 | 22 | + | IGLV1-36 | 22 | + |
| exon-intron | IGLV1-47 | 22 | - | IGL | 22 | - |
| exon-exon | IGLV2-11 | 22 | + | IGLC2 | 22 | + |
| exon-exon | IGLV2-23 | 22 | + | IGLV2-18 | 22 | + |
| exon-exon | IGLV2-8 | 22 | + | IGLL5 | 22 | + |
| exon-exon | IGLV3-16 | 22 | + | IGLL5 | 22 | + |
| exon-exon | IGLV3-19 | 22 | + | IGLL5 | 22 | + |
| exon-intron | IGLV3-19 | 22 | + | LOC105372947 | 22 | + |
| exon-exon | IGLV3-21 | 22 | + | IGLL5 | 22 | + |
| exon-exon | IGLV3-25 | 22 | + | IGLL5 | 22 | + |
| exon-intron | IGLV3-27 | 22 | - | IGL | 22 | - |
| exon-intron | IGLV6-57 | 22 | + | IGL | 22 | + |
| exon-intron | IGLV6-57 | 22 | + | IGL | 22 | + |
| exon-intron | IGSF1 | X | - | LOC102723546 | X | - |
| intron-exon | IGSF11 | 3 | + | IGSF11-AS1 | 3 | + |
| intron-exon | IGSF23 | 19 | - | CEACAM22P | 19 | - |
| intron-exon | IGSF5 | 21 | - | FTL | 19 | + |
| exon-exon | IK | 5 | - | NDUFA2 | 5 | - |
| intron-exon | IKBKG | X | - | G6PD | X | - |
| intron-exon | IKBKG | X | - | G6PD | X | - |
| intron-exon | IKBKG | X | - | G6PD | X | - |
| exon-exon | IKBKG | X | - | G6PD | X | - |
| intron-exon | IKZF5 | 10 | - | PSTK | 10 | - |
| intron-exon | IL10RB | 21 | + | IFNAR1 | 21 | + |
| exon-exon | IL10RB | 21 | - | IFNAR2 | 21 | - |
| exon-exon | IL10RB-DT | 21 | - | IFNAR2 | 21 | - |
| exon-intron | IL11RA | 9 | - | GALT | 9 | - |
| exon-exon | IL11RA | 9 | - | GALT | 9 | - |
| exon-exon | IL11RA | 9 | - | GALT | 9 | - |
| exon-exon | IL12A-AS1 | 3 | + | IL12A | 3 | + |
| intron-exon | IL12A-AS1 | 3 | + | LINC01100 | 3 | + |
| exon-exon | IL17RD | 3 | - | CTNNA1 | 5 | + |
| exon-exon | IL18R1 | 2 | - | IL1RL1 | 2 | - |
| exon-exon | IL1RL1 | 2 | + | IL18R1 | 2 | + |
| exon-exon | IL20RA | 6 | + | ATP6V0E2 | 7 | - |
| exon-exon | IL20RB | 3 | - | IL20RB-AS1 | 3 | - |
| intron-exon | IL20RB-AS1 | 3 | + | IL20RB | 3 | + |
| exon-intron | IL21-AS1 | 4 | - | IL21 | 4 | - |
| exon-exon | IL2RB | 22 | + | C1QTNF6 | 22 | + |
| intron-exon | IL4I1 | 19 | + | SIGLEC11 | 19 | + |
| exon-exon | IL4I1 | 19 | + | ATF5 | 19 | + |
| intron-exon | IL5 | 5 | + | RAD50 | 5 | + |
| intron-exon | IL6 | 7 | - | STEAP1B | 7 | - |
| exon-exon | IL6-AS1 | 7 | + | IL6 | 7 | + |
| exon-intron | IL7 | 8 | - | ZC2HC1A | 8 | - |
| intron-exon | ILF3 | 19 | - | OTUD5 | X | - |
| intron-exon | ILK | 11 | + | TAF10 | 11 | + |
| exon-intron | ILRUN | 6 | - | RPH3A | 12 | - |
| exon-exon | IMMT | 2 | + | IMMT | 2 | - |
| exon-exon | IMPACT | 18 | - | DPY19L4 | 8 | - |
| exon-exon | INAVA | 1 | + | HDDC3 | 15 | - |
| exon-intron | INE2 | X | - | CA5BP1-CA5B | X | - |
| exon-exon | ING1 | 13 | - | CARS2 | 13 | - |
| exon-intron | ING3 | 7 | + | EXOC4 | 7 | - |
| exon-intron | INHBA | 7 | + | INHBA-AS1 | 7 | + |
| exon-exon | INHBA | 7 | - | LOC105375247 | 7 | - |
| exon-intron | INKA2 | 1 | + | DDX20 | 1 | + |
| exon-exon | INMT-MINDY4 | 7 | + | INMT-MINDY4 | 7 | + |
| exon-intron | INO80 | 15 | + | PTCHD4 | 6 | + |
| exon-exon | INO80B | 2 | + | WBP1 | 2 | + |
| exon-exon | INO80B-WBP1 | 2 | - | INO80B-WBP1 | 2 | - |
| exon-exon | INO80B-WBP1 | 2 | - | INO80B-WBP1 | 2 | - |
| exon-exon | INO80E | 16 | + | DOC2A | 16 | + |
| intron-exon | INPP1 | 2 | - | HIBCH | 2 | - |
| intron-exon | INPP4B | 4 | + | LOC105377457 | 4 | + |
| exon-intron | INS | 11 | - | IGF2 | 11 | - |
| exon-exon | INS-IGF2 | 11 | + | HNRNPA2B1 | 7 | + |
| exon-intron | INS-IGF2 | 11 | + | NBPF19 | 1 | + |
| exon-intron | INS-IGF2 | 11 | + | NBPF19 | 1 | + |
| exon-intron | INS-IGF2 | 11 | + | KMT2C | 7 | - |
| intron-exon | INS-IGF2 | 11 | - | MYH11 | 16 | - |
| exon-exon | INS-IGF2 | 11 | - | INS-IGF2 | 11 | - |
| exon-exon | INS-IGF2 | 11 | - | INS-IGF2 | 11 | - |
| exon-intron | INSR | 19 | - | MTND1P23 | 1 | + |
| intron-exon | INTS10 | 8 | - | INTS10 | 8 | + |
| exon-exon | INTS11 | 1 | - | PUSL1 | 1 | - |
| exon-exon | INTS11 | 1 | - | PUSL1 | 1 | - |
| exon-exon | INTS11 | 1 | - | PUSL1 | 1 | - |
| intron-exon | INTS12 | 4 | - | ARHGEF38 | 4 | - |
| exon-intron | INTS2 | 17 | - | ACSS1 | 20 | - |
| exon-intron | INTS2 | 17 | - | ACSS1 | 20 | - |
| exon-intron | INTS3 | 1 | + | PPP6R2 | 22 | + |
| exon-exon | INTS4 | 11 | - | INTS4P1 | 7 | + |
| exon-exon | INTS5 | 11 | + | INTS5 | 11 | - |
| intron-exon | INTS6-AS1 | 13 | - | INTS6 | 13 | - |
| intron-exon | INTS9 | 8 | + | GNB3 | 12 | + |
| intron-exon | INVS | 9 | + | SOGA1 | 20 | - |
| intron-exon | INVS | 9 | - | GRIK1 | 21 | - |
| intron-exon | IPMK | 10 | + | CISD1 | 10 | + |
| intron-exon | IPMK | 10 | + | CISD1 | 10 | + |
| exon-exon | IPO7 | 11 | + | IPO7P2 | 13 | - |
| exon-intron | IPO7 | 11 | - | DENND2B | 11 | - |
| exon-intron | IPO7 | 11 | - | DENND2B | 11 | - |
| intron-exon | IPO9-AS1 | 1 | - | INO80D | 2 | + |
| exon-exon | IPPKP1 | 13 | - | IPPK | 9 | - |
| exon-intron | IQCA1 | 2 | + | LOC105373945 | 2 | + |
| exon-intron | IQCA1 | 2 | + | LOC105373945 | 2 | + |
| exon-exon | IQCD | 12 | + | TPCN1 | 12 | + |
| exon-exon | IQCD | 12 | + | TPCN1 | 12 | + |
| intron-exon | IQCD | 12 | + | TPCN1 | 12 | + |
| exon-intron | IQCF4P | 3 | + | IQCF3 | 3 | + |
| intron-exon | IQCG | 3 | - | DOCK7 | 1 | + |
| intron-exon | IQCH | 15 | - | AAGAB | 15 | - |
| exon-exon | IQCH-AS1 | 15 | + | C15orf61 | 15 | + |
| exon-exon | IQCJ | 3 | + | SCHIP1 | 3 | + |
| intron-exon | IQSEC3P2 | 12 | - | PRB2 | 12 | - |
| intron-exon | IRAG1 | 11 | - | IRAG1-AS1 | 11 | - |
| intron-exon | IRAG1 | 11 | - | IRAG1-AS1 | 11 | - |
| intron-exon | IRAG1 | 11 | - | IRAG1-AS1 | 11 | - |
| intron-exon | IRAG1 | 11 | - | IRAG1-AS1 | 11 | - |
| intron-exon | IRAG1 | 11 | - | IRAG1-AS1 | 11 | - |
| intron-exon | IRAG1 | 11 | - | IRAG1-AS1 | 11 | - |
| intron-exon | IRAG1 | 11 | - | IRAG1-AS1 | 11 | - |
| intron-exon | IRAG1 | 11 | - | IRAG1-AS1 | 11 | - |
| exon-exon | IRAG1-AS1 | 11 | + | IRAG1 | 11 | + |
| exon-exon | IRAK1BP1 | 6 | + | PHIP | 6 | + |
| exon-intron | IRAK3 | 12 | + | AC078889.1 | 12 | + |
| exon-exon | IRF1-AS1 | 5 | + | RAD50 | 5 | + |
| exon-intron | IRF1-AS1 | 5 | + | IRF1 | 5 | + |
| exon-exon | IRF1-AS1 | 5 | + | RAD50 | 5 | + |
| exon-exon | IRF3 | 19 | + | BCL2L12 | 19 | + |
| exon-exon | IRF3 | 19 | + | BCL2L12 | 19 | + |
| exon-intron | IRF6 | 1 | + | DIP2A | 21 | + |
| exon-exon | IRF6 | 1 | - | C1orf74 | 1 | - |
| exon-intron | ISG20L2 | 1 | + | MAP1B | 5 | - |
| exon-exon | ISG20L2 | 1 | - | C1orf61 | 1 | - |
| exon-intron | ISOC2 | 19 | - | TNNT1 | 19 | - |
| intron-exon | IST1 | 16 | - | PRCP | 11 | - |
| intron-exon | ISY1 | 3 | - | RAB43 | 3 | - |
| exon-exon | ISY1-RAB43 | 3 | - | ISY1-RAB43 | 3 | - |
| exon-exon | ISY1-RAB43 | 3 | - | ISY1-RAB43 | 3 | - |
| exon-exon | ISYNA1 | 19 | - | CSH1 | 17 | - |
| exon-intron | ITFG1 | 16 | + | LOC101927080 | 16 | + |
| exon-intron | ITFG1 | 16 | + | LOC101927080 | 16 | + |
| exon-exon | ITFG1 | 16 | - | ITFG1-AS1 | 16 | - |
| exon-exon | ITFG1 | 16 | - | ITFG1-AS1 | 16 | - |
| exon-exon | ITFG1 | 16 | - | ITFG1-AS1 | 16 | - |
| exon-exon | ITFG1 | 16 | - | ITFG1-AS1 | 16 | - |
| exon-exon | ITFG1 | 16 | - | ITFG1-AS1 | 16 | - |
| exon-exon | ITFG1 | 16 | - | ITFG1-AS1 | 16 | - |
| exon-exon | ITFG1 | 16 | - | ITFG1-AS1 | 16 | - |
| exon-exon | ITFG1 | 16 | - | ITFG1-AS1 | 16 | - |
| exon-exon | ITFG1 | 16 | - | ITFG1-AS1 | 16 | - |
| intron-exon | ITFG1 | 16 | - | ITFG1-AS1 | 16 | - |
| intron-exon | ITFG1 | 16 | - | ITFG1-AS1 | 16 | - |
| intron-exon | ITFG1 | 16 | - | ITFG1-AS1 | 16 | - |
| exon-exon | ITFG1 | 16 | - | NETO2 | 16 | - |
| intron-exon | ITFG2-AS1 | 12 | + | FKBP4 | 12 | + |
| exon-intron | ITGA9 | 3 | + | ITGA9-AS1 | 3 | + |
| intron-exon | ITGA9-AS1 | 3 | - | ITGA9 | 3 | - |
| intron-exon | ITGAM | 16 | - | FBXL19-AS1 | 16 | - |
| exon-intron | ITGB1 | 10 | - | LOC105376486 | 10 | - |
| exon-intron | ITGB1 | 10 | - | LOC105376486 | 10 | - |
| intron-exon | ITGB1-DT | 10 | - | ITGB1 | 10 | - |
| intron-exon | ITGB1-DT | 10 | - | ITGB1 | 10 | - |
| intron-exon | ITGB1-DT | 10 | - | ITGB1 | 10 | - |
| exon-exon | ITGB2-AS1 | 21 | - | ITGB2 | 21 | - |
| exon-intron | ITGB2-AS1 | 21 | - | ITGB2 | 21 | - |
| exon-exon | ITGB2-AS1 | 21 | - | ITGB2 | 21 | - |
| exon-exon | ITGB3 | 17 | + | FMN1 | 15 | - |
| intron-exon | ITGB3BP | 1 | + | EFCAB7 | 1 | + |
| exon-exon | ITGB8 | 7 | + | ITGB8 | 7 | - |
| exon-exon | ITGB8 | 7 | - | ITGB8 | 7 | + |
| exon-intron | ITIH5 | 10 | - | LAPTM4B | 8 | - |
| exon-intron | ITM2C | 2 | + | BIRC6 | 2 | - |
| exon-exon | ITPR2 | 12 | - | ITPR2 | 12 | + |
| exon-intron | ITPRIPL2 | 16 | + | AC099518.3 | 16 | + |
| exon-exon | ITPRIPL2 | 16 | + | SYT17 | 16 | + |
| exon-intron | IVD | 15 | + | DNAJC17 | 15 | + |
| exon-exon | IVD | 15 | - | TALAM1 | 11 | - |
| exon-exon | IVD | 15 | - | TALAM1 | 11 | - |
| exon-intron | IWS1 | 2 | - | LOC105373608 | 2 | - |
| exon-exon | IZUMO4 | 19 | - | MOB3A | 19 | - |
| intron-exon | JADE2 | 5 | + | SEC31A | 4 | - |
| exon-intron | JAKMIP2 | 5 | - | JAKMIP2-AS1 | 5 | - |
| exon-exon | JAM3 | 11 | - | EPS8L2 | 11 | + |
| intron-exon | JAZF1-AS1 | 7 | - | JAZF1 | 7 | - |
| intron-exon | JAZF1-AS1 | 7 | - | JAZF1 | 7 | - |
| intron-exon | JAZF1-AS1 | 7 | - | JAZF1 | 7 | - |
| intron-exon | JAZF1-AS1 | 7 | - | JAZF1 | 7 | - |
| exon-exon | JMJD7 | 15 | + | PLA2G4B | 15 | + |
| exon-exon | JMJD8 | 16 | - | STUB1 | 16 | - |
| exon-exon | JMJD8 | 16 | - | STUB1 | 16 | - |
| exon-exon | JMJD8 | 16 | - | STUB1 | 16 | - |
| exon-exon | JMJD8 | 16 | - | STUB1 | 16 | - |
| exon-exon | JMJD8 | 16 | - | STUB1 | 16 | - |
| exon-exon | JMJD8 | 16 | - | STUB1 | 16 | - |
| exon-exon | JMJD8 | 16 | - | STUB1 | 16 | - |
| exon-exon | JMJD8 | 16 | - | STUB1 | 16 | - |
| exon-exon | JMJD8 | 16 | - | STUB1 | 16 | - |
| exon-exon | JMJD8 | 16 | - | STUB1 | 16 | - |
| exon-exon | JMJD8 | 16 | - | STUB1 | 16 | - |
| exon-exon | JMJD8 | 16 | - | STUB1 | 16 | - |
| exon-exon | JMJD8 | 16 | - | STUB1 | 16 | - |
| exon-exon | JMJD8 | 16 | - | STUB1 | 16 | - |
| exon-exon | JMJD8 | 16 | - | STUB1 | 16 | - |
| exon-exon | JOSD1 | 22 | - | TOMM22 | 22 | - |
| exon-exon | JOSD1 | 22 | - | TOMM22 | 22 | - |
| exon-exon | JTB | 1 | - | CREB3L4 | 1 | - |
| exon-intron | JTB | 1 | - | STX18-AS1 | 4 | - |
| exon-intron | JUN | 1 | + | SLC25A1 | 22 | + |
| exon-exon | JUNB | 19 | - | HOOK2 | 19 | - |
| exon-intron | JUND | 19 | + | LOC105376392 | 10 | - |
| exon-exon | JUND | 19 | + | CNOT8 | 5 | - |
| intron-exon | KALRN | 3 | + | ACIN1 | 14 | + |
| exon-exon | KANSL1 | 17 | + | KANSL1 | 17 | - |
| exon-exon | KANSL1 | 17 | - | MAPT | 17 | - |
| exon-intron | KANSL1 | 17 | - | ARL17A | 17 | - |
| intron-exon | KANSL1 | 17 | - | CYFIP2 | 5 | + |
| exon-exon | KAT2A | 17 | + | RAB5C | 17 | + |
| exon-exon | KAT2A | 17 | + | RAB5C | 17 | + |
| exon-exon | KAT2A | 17 | + | RAB5C | 17 | + |
| exon-intron | KAT6B | 10 | + | DUPD1 | 10 | + |
| exon-exon | KAT6B | 10 | - | KAT6B | 10 | + |
| exon-exon | KAT7 | 17 | + | LOC648927 | X | - |
| intron-exon | KAT7 | 17 | - | FAM117A | 17 | - |
| intron-exon | KAT7 | 17 | - | FAM117A | 17 | - |
| intron-exon | KAT7 | 17 | - | FAM117A | 17 | - |
| intron-exon | KAT7 | 17 | - | FAM117A | 17 | - |
| intron-exon | KAT7 | 17 | - | FAM117A | 17 | - |
| intron-exon | KAT7 | 17 | - | FAM117A | 17 | - |
| intron-exon | KAT7 | 17 | - | FAM117A | 17 | - |
| intron-exon | KAT7 | 17 | - | FAM117A | 17 | - |
| exon-intron | KATNIP | 16 | - | KATNIP | 16 | + |
| intron-exon | KAZN | 1 | + | CNP | 17 | - |
| intron-exon | KAZN | 1 | - | LLGL2 | 17 | - |
| intron-exon | KAZN | 1 | - | LLGL2 | 17 | - |
| intron-exon | KCCAT198 | 12 | + | C12orf75 | 12 | + |
| exon-exon | KCNAB1 | 3 | + | KIF3B | 20 | - |
| exon-exon | KCNAB1 | 3 | + | KIF3B | 20 | - |
| exon-exon | KCNAB1 | 3 | + | KIF3B | 20 | - |
| intron-exon | KCNB1 | 20 | + | LOC105372649 | 20 | + |
| exon-intron | KCND3 | 1 | + | SLIT2 | 4 | - |
| intron-exon | KCND3 | 1 | + | KCND3-AS1 | 1 | + |
| intron-exon | KCNH3 | 12 | + | MCRS1 | 12 | + |
| intron-exon | KCNH8 | 3 | - | LRRC41 | 1 | - |
| intron-exon | KCNIP2-AS1 | 10 | - | OGA | 10 | - |
| intron-exon | KCNIP4 | 4 | - | PACRGL | 4 | - |
| intron-exon | KCNIP4 | 4 | - | PACRGL | 4 | - |
| exon-exon | KCNJ14 | 19 | + | CYTH2 | 19 | + |
| exon-exon | KCNJ2-AS1 | 17 | + | KCNJ2 | 17 | + |
| intron-exon | KCNJ9 | 1 | - | KCNJ10 | 1 | - |
| intron-exon | KCNJ9 | 1 | - | KCNJ10 | 1 | - |
| intron-exon | KCNJ9 | 1 | - | KCNJ10 | 1 | - |
| intron-exon | KCNJ9 | 1 | - | KCNJ10 | 1 | - |
| intron-exon | KCNJ9 | 1 | - | KCNJ10 | 1 | - |
| intron-exon | KCNJ9 | 1 | - | KCNJ10 | 1 | - |
| intron-exon | KCNJ9 | 1 | - | KCNJ10 | 1 | - |
| intron-exon | KCNJ9 | 1 | - | KCNJ10 | 1 | - |
| intron-exon | KCNJ9 | 1 | - | KCNJ10 | 1 | - |
| intron-exon | KCNJ9 | 1 | - | KCNJ10 | 1 | - |
| intron-exon | KCNJ9 | 1 | - | KCNJ10 | 1 | - |
| intron-exon | KCNJ9 | 1 | - | KCNJ10 | 1 | - |
| intron-exon | KCNJ9 | 1 | - | KCNJ10 | 1 | - |
| intron-exon | KCNJ9 | 1 | - | KCNJ10 | 1 | - |
| intron-exon | KCNJ9 | 1 | - | KCNJ10 | 1 | - |
| intron-exon | KCNJ9 | 1 | - | KCNJ10 | 1 | - |
| intron-exon | KCNJ9 | 1 | - | KCNJ10 | 1 | - |
| intron-exon | KCNJ9 | 1 | - | KCNJ10 | 1 | - |
| intron-exon | KCNJ9 | 1 | - | KCNJ10 | 1 | - |
| intron-exon | KCNJ9 | 1 | - | KCNJ10 | 1 | - |
| intron-exon | KCNJ9 | 1 | - | KCNJ10 | 1 | - |
| intron-exon | KCNJ9 | 1 | - | KCNJ10 | 1 | - |
| intron-exon | KCNJ9 | 1 | - | KCNJ10 | 1 | - |
| intron-exon | KCNJ9 | 1 | - | KCNJ10 | 1 | - |
| intron-exon | KCNJ9 | 1 | - | KCNJ10 | 1 | - |
| intron-exon | KCNJ9 | 1 | - | KCNJ10 | 1 | - |
| intron-exon | KCNJ9 | 1 | - | KCNJ10 | 1 | - |
| intron-exon | KCNJ9 | 1 | - | KCNJ10 | 1 | - |
| intron-exon | KCNJ9 | 1 | - | KCNJ10 | 1 | - |
| intron-exon | KCNJ9 | 1 | - | KCNJ10 | 1 | - |
| intron-exon | KCNJ9 | 1 | - | KCNJ10 | 1 | - |
| intron-exon | KCNJ9 | 1 | - | KCNJ10 | 1 | - |
| intron-exon | KCNJ9 | 1 | - | KCNJ10 | 1 | - |
| intron-exon | KCNJ9 | 1 | - | KCNJ10 | 1 | - |
| intron-exon | KCNJ9 | 1 | - | KCNJ10 | 1 | - |
| intron-exon | KCNJ9 | 1 | - | KCNJ10 | 1 | - |
| intron-exon | KCNJ9 | 1 | - | KCNJ10 | 1 | - |
| intron-exon | KCNK12 | 2 | - | MSH2 | 2 | - |
| intron-exon | KCNK15-AS1 | 20 | - | LINC01260 | 20 | - |
| exon-exon | KCNK4-TEX40 | 11 | + | CATSPERZ | 11 | + |
| exon-exon | KCNK4-TEX40 | 11 | - | KCNK4-TEX40 | 11 | - |
| exon-exon | KCNK4-TEX40 | 11 | - | KCNK4-TEX40 | 11 | - |
| exon-exon | KCNK4-TEX40 | 11 | - | KCNK4-TEX40 | 11 | - |
| exon-intron | KCNK6 | 19 | - | RPS14 | 5 | + |
| exon-intron | KCNMA1 | 10 | + | SMARCA2 | 9 | + |
| exon-intron | KCNMA1 | 10 | + | KCNMA1-AS1 | 10 | + |
| exon-intron | KCNMA1 | 10 | - | DCC | 18 | + |
| intron-exon | KCNMB2-AS1 | 3 | + | KCNMB2 | 3 | + |
| intron-exon | KCNMB2-AS1 | 3 | + | KCNMB2 | 3 | + |
| intron-exon | KCNQ1-AS1 | 11 | - | KCNQ1 | 11 | - |
| intron-exon | KCNQ1-AS1 | 11 | - | KCNQ1 | 11 | - |
| exon-exon | KCNQ5-AS1 | 6 | - | KCNQ5 | 6 | - |
| exon-intron | KCTD1 | 18 | + | SETX | 9 | - |
| exon-exon | KCTD14 | 11 | + | NDUFC2 | 11 | + |
| exon-exon | KCTD14 | 11 | + | NDUFC2 | 11 | + |
| exon-exon | KCTD14 | 11 | + | NDUFC2 | 11 | + |
| intron-exon | KCTD21-AS1 | 11 | + | KCTD21 | 11 | - |
| exon-exon | KCTD7 | 7 | + | RABGEF1 | 7 | + |
| exon-intron | KCTD7 | 7 | + | C6orf62 | 6 | - |
| exon-intron | KDELR2 | 7 | - | LINC02608 | 1 | - |
| intron-exon | KDELR2 | 7 | - | DAGLB | 7 | - |
| exon-intron | KDM1B | 6 | + | RUNDC1 | 17 | - |
| intron-exon | KDM2B | 12 | - | TLK2 | 17 | - |
| intron-exon | KDM4A-AS1 | 1 | + | ST3GAL3 | 1 | + |
| exon-exon | KDM4A-AS1 | 1 | - | KDM4A | 1 | - |
| exon-exon | KDM4A-AS1 | 1 | - | KDM4A | 1 | - |
| exon-exon | KDM4A-AS1 | 1 | - | KDM4A | 1 | - |
| intron-exon | KDM4A-AS1 | 1 | - | KDM4A | 1 | - |
| intron-exon | KDM4C | 9 | + | TNC | 9 | - |
| exon-exon | KDM5A | 12 | - | MBP | 18 | - |
| exon-intron | KDM5C | X | + | TBC1D3P3 | 17 | - |
| exon-exon | KHK | 2 | + | CGREF1 | 2 | + |
| exon-exon | KIAA0100 | 17 | + | GNB2 | 7 | - |
| intron-exon | KIAA0825 | 5 | - | LOC105379087 | 5 | - |
| intron-exon | KIAA1549 | 7 | - | BRAF | 7 | - |
| exon-exon | KIAA1614 | 1 | + | KIAA1614-AS1 | 1 | + |
| exon-intron | KIAA1671 | 22 | - | PIWIL3 | 22 | - |
| intron-exon | KIAA2012 | 2 | - | TMEM170A | 16 | + |
| exon-exon | KIAA2026 | 9 | + | CALD1 | 7 | - |
| exon-intron | KIF19 | 17 | - | IGL | 22 | + |
| exon-intron | KIF1A | 2 | - | DCAF13 | 8 | + |
| intron-exon | KIF1B | 1 | + | UBFD1 | 16 | + |
| exon-intron | KIF1B | 1 | - | SUMF1 | 3 | + |
| exon-exon | KIF21A | 12 | + | NDUFAF7 | 2 | + |
| exon-exon | KIF22 | 16 | - | LOC107984837 | 16 | - |
| exon-intron | KIF22 | 16 | - | LOC107984837 | 16 | - |
| exon-intron | KIF22 | 16 | - | LOC107984837 | 16 | - |
| exon-intron | KIF22 | 16 | - | LOC107984837 | 16 | - |
| exon-intron | KIF22 | 16 | - | LOC107984837 | 16 | - |
| exon-exon | KIF22 | 16 | - | LOC107984837 | 16 | - |
| exon-intron | KIF22 | 16 | - | LOC107984837 | 16 | - |
| exon-intron | KIF22 | 16 | - | LOC107984837 | 16 | - |
| exon-exon | KIF22 | 16 | - | LOC107984837 | 16 | - |
| exon-exon | KIF24 | 9 | - | UBAP1 | 9 | - |
| exon-exon | KIF24 | 9 | - | UBAP1 | 9 | - |
| exon-exon | KIF24 | 9 | - | UBAP1 | 9 | - |
| exon-exon | KIF24 | 9 | - | UBAP1 | 9 | - |
| exon-exon | KIF24 | 9 | - | UBAP1 | 9 | - |
| exon-exon | KIF24 | 9 | - | UBAP1 | 9 | - |
| exon-exon | KIF24 | 9 | - | UBAP1 | 9 | - |
| exon-exon | KIF24 | 9 | - | UBAP1 | 9 | - |
| exon-exon | KIF24 | 9 | - | UBAP1 | 9 | - |
| intron-exon | KIF25-AS1 | 6 | + | KIF25 | 6 | + |
| exon-exon | KIF27 | 9 | - | LOC101927552 | 9 | - |
| intron-exon | KIF28P | 1 | - | LINC01341 | 1 | - |
| intron-exon | KIF5B | 10 | - | ATP5MD | 10 | + |
| exon-exon | KIF5B | 10 | - | RET | 10 | + |
| exon-exon | KIF5B | 10 | - | RET | 10 | + |
| exon-intron | KIF9 | 3 | - | KIF9-AS1 | 3 | - |
| exon-exon | KIR2DL1 | 19 | + | KIR2DS4 | 19 | + |
| exon-exon | KIR2DL3 | 19 | + | KIR2DS4 | 19 | + |
| exon-exon | KIR2DL3 | 19 | + | KIR2DL1 | 19 | + |
| exon-exon | KIR2DL3 | 19 | + | KIR2DS4 | 19 | + |
| exon-exon | KIR2DL3 | 19 | + | KIR2DS4 | 19 | + |
| exon-intron | KIR2DL3 | 19 | + | KIR2DP1 | 19 | + |
| intron-exon | KIR2DP1 | 19 | + | KIR2DL1 | 19 | + |
| exon-exon | KIR3DL1 | 19 | + | KIR2DS4 | 19 | + |
| exon-exon | KIR3DL1 | 19 | + | KIR2DS4 | 19 | + |
| intron-exon | KIR3DX1 | 19 | + | INO80D | 2 | + |
| intron-exon | KIRREL2 | 19 | - | NPHS1 | 19 | - |
| intron-exon | KIRREL3 | 11 | - | ATP2B2 | 3 | - |
| intron-exon | KISS1 | 1 | + | PSEN1 | 14 | - |
| intron-exon | KIZ-AS1 | 20 | - | KIZ | 20 | - |
| intron-exon | KIZ-AS1 | 20 | - | KIZ | 20 | - |
| exon-intron | KLC1 | 14 | + | LOC653513 | 1 | - |
| intron-exon | KLF3 | 4 | - | KLF3-AS1 | 4 | - |
| intron-exon | KLF3 | 4 | - | KLF3-AS1 | 4 | - |
| exon-exon | KLF9 | 9 | + | KLF9-DT | 9 | + |
| exon-exon | KLHDC1 | 14 | + | LOC105378179 | 14 | + |
| intron-exon | KLHDC2 | 14 | + | LOC105378179 | 14 | + |
| exon-intron | KLHDC9 | 1 | + | C5orf34 | 5 | - |
| exon-intron | KLK12 | 19 | - | KLK11 | 19 | - |
| exon-exon | KLK15 | 19 | - | KLK1 | 19 | - |
| intron-exon | KLK2 | 19 | - | KLK3 | 19 | - |
| exon-exon | KLK4 | 19 | - | KLKP1 | 19 | - |
| exon-intron | KLK6 | 19 | + | LOC105372442 | 19 | + |
| exon-intron | KLK6 | 19 | + | LOC105372442 | 19 | + |
| exon-intron | KLK7 | 19 | - | LINC00621 | 13 | - |
| exon-exon | KLRC4 | 12 | - | KLRK1 | 12 | - |
| exon-exon | KLRC4 | 12 | - | KLRK1 | 12 | - |
| exon-intron | KLRC4 | 12 | - | KLRK1 | 12 | - |
| exon-exon | KLRC4 | 12 | - | KLRK1 | 12 | - |
| exon-exon | KLRC4 | 12 | - | KLRK1 | 12 | - |
| exon-exon | KLRC4 | 12 | - | KLRK1 | 12 | - |
| exon-exon | KLRC4 | 12 | - | KLRK1 | 12 | - |
| exon-exon | KLRC4-KLRK1 | 12 | + | KLRC4-KLRK1 | 12 | + |
| exon-exon | KLRC4-KLRK1 | 12 | + | KLRC4-KLRK1 | 12 | + |
| exon-exon | KLRC4-KLRK1 | 12 | + | KLRC4-KLRK1 | 12 | + |
| exon-exon | KLRC4-KLRK1 | 12 | - | KLRK1-AS1 | 12 | - |
| exon-exon | KLRC4-KLRK1 | 12 | - | KLRK1-AS1 | 12 | - |
| exon-exon | KLRC4-KLRK1 | 12 | - | KLRK1-AS1 | 12 | - |
| exon-exon | KLRC4-KLRK1 | 12 | - | KLRK1-AS1 | 12 | - |
| exon-exon | KLRC4-KLRK1 | 12 | - | KLRC4-KLRK1 | 12 | - |
| exon-exon | KLRC4-KLRK1 | 12 | - | KLRC4-KLRK1 | 12 | - |
| exon-exon | KLRC4-KLRK1 | 12 | - | KLRC4-KLRK1 | 12 | - |
| intron-exon | KLRG1 | 12 | + | A2M | 12 | - |
| intron-exon | KLRK1-AS1 | 12 | + | KLRC1 | 12 | + |
| intron-exon | KMT2A | 11 | + | FLNA | X | - |
| exon-intron | KMT2A | 11 | + | AFF1 | 4 | + |
| exon-exon | KMT2A | 11 | + | FRYL | 4 | - |
| exon-exon | KMT2A | 11 | + | GAS7 | 17 | - |
| exon-exon | KMT2A | 11 | + | GAS7 | 17 | - |
| exon-exon | KMT2A | 11 | + | MAML2 | 11 | - |
| exon-exon | KMT2A | 11 | + | ELL | 19 | - |
| exon-exon | KMT2A | 11 | + | ELL | 19 | - |
| exon-exon | KMT2A | 11 | + | MAML2 | 11 | - |
| exon-intron | KMT2A | 11 | + | AFF1 | 4 | + |
| exon-intron | KMT2A | 11 | + | AFF1 | 4 | + |
| exon-exon | KMT2A | 11 | + | AFF1 | 4 | + |
| exon-exon | KMT2A | 11 | + | GAS7 | 17 | - |
| exon-exon | KMT2A | 11 | + | SEPTIN6 | X | - |
| exon-exon | KMT2A | 11 | + | SEPTIN6 | X | - |
| exon-intron | KMT2A | 11 | + | SEPTIN6 | X | - |
| exon-intron | KMT2A | 11 | + | AFF1 | 4 | + |
| exon-intron | KMT2A | 11 | + | DOCK4 | 7 | - |
| exon-intron | KMT2D | 12 | - | GOLPH3 | 5 | - |
| exon-intron | KMT2D | 12 | - | GOLPH3 | 5 | - |
| exon-intron | KMT5B | 11 | - | FAM86C2P | 11 | - |
| exon-intron | KNOP1 | 16 | - | VPS35L | 16 | - |
| exon-exon | KPNA2 | 17 | + | ARHGAP27P1-BPTFP1-KPNA2P3 | 17 | - |
| exon-exon | KPNA2 | 17 | - | LOC101929240 | 17 | + |
| exon-exon | KPNA2 | 17 | - | LOC101929240 | 17 | + |
| exon-exon | KPNA2 | 17 | - | LOC101929240 | 17 | + |
| exon-exon | KPNA2 | 17 | - | LOC101929240 | 17 | + |
| exon-exon | KPNA4 | 3 | - | ANO10 | 3 | - |
| exon-exon | KPNA5 | 6 | - | NCBP2AS2 | 3 | - |
| exon-exon | KRBOX1 | 3 | + | GASK1A | 3 | + |
| exon-exon | KRBOX1 | 3 | + | GASK1A | 3 | + |
| intron-exon | KREMEN2 | 16 | + | PKMYT1 | 16 | + |
| exon-exon | KRI1 | 19 | + | PABPC1 | 8 | - |
| exon-intron | KRI1 | 19 | - | RAB20 | 13 | - |
| exon-exon | KRR1 | 12 | - | GLIPR1 | 12 | - |
| exon-exon | KRR1 | 12 | - | GLIPR1 | 12 | - |
| exon-exon | KRR1 | 12 | - | GLIPR1 | 12 | - |
| exon-exon | KRR1 | 12 | - | GLIPR1 | 12 | - |
| exon-exon | KRR1 | 12 | - | GLIPR1 | 12 | - |
| exon-exon | KRR1 | 12 | - | GLIPR1 | 12 | - |
| exon-exon | KRR1 | 12 | - | GLIPR1 | 12 | - |
| exon-exon | KRR1 | 12 | - | GLIPR1 | 12 | - |
| exon-exon | KRR1 | 12 | - | GLIPR1 | 12 | - |
| exon-exon | KRR1 | 12 | - | GLIPR1 | 12 | - |
| exon-exon | KRR1 | 12 | - | GLIPR1 | 12 | - |
| exon-exon | KRR1 | 12 | - | GLIPR1 | 12 | - |
| exon-exon | KRR1 | 12 | - | GLIPR1 | 12 | - |
| exon-exon | KRR1 | 12 | - | GLIPR1 | 12 | - |
| exon-exon | KRR1 | 12 | - | GLIPR1 | 12 | - |
| exon-exon | KRR1 | 12 | - | GLIPR1 | 12 | - |
| exon-exon | KRR1 | 12 | - | GLIPR1 | 12 | - |
| exon-exon | KRR1 | 12 | - | GLIPR1 | 12 | - |
| exon-exon | KRR1 | 12 | - | GLIPR1 | 12 | - |
| exon-exon | KRR1 | 12 | - | GLIPR1 | 12 | - |
| exon-exon | KRR1 | 12 | - | GLIPR1 | 12 | - |
| exon-exon | KRR1 | 12 | - | GLIPR1 | 12 | - |
| exon-exon | KRR1 | 12 | - | GLIPR1 | 12 | - |
| exon-exon | KRR1 | 12 | - | GLIPR1 | 12 | - |
| exon-exon | KRR1 | 12 | - | GLIPR1 | 12 | - |
| exon-exon | KRR1 | 12 | - | GLIPR1 | 12 | - |
| exon-exon | KRR1 | 12 | - | GLIPR1 | 12 | - |
| exon-exon | KRR1 | 12 | - | GLIPR1 | 12 | - |
| exon-exon | KRR1 | 12 | - | GLIPR1 | 12 | - |
| exon-exon | KRR1 | 12 | - | GLIPR1 | 12 | - |
| exon-exon | KRR1 | 12 | - | GLIPR1 | 12 | - |
| exon-exon | KRR1 | 12 | - | GLIPR1 | 12 | - |
| exon-intron | KRR1 | 12 | - | GLIPR1 | 12 | - |
| exon-intron | KRT10 | 17 | + | TMEM99 | 17 | + |
| exon-intron | KRT10 | 17 | + | TMEM99 | 17 | + |
| exon-exon | KRT13 | 17 | + | POTEM | 14 | - |
| exon-exon | KRT16 | 17 | - | KRT14 | 17 | - |
| exon-exon | KRT16 | 17 | - | KRT14 | 17 | - |
| exon-exon | KRT16P4 | 17 | + | KRT17P1 | 17 | - |
| exon-exon | KRT16P6 | 17 | + | KRT16P2 | 17 | + |
| exon-intron | KRT17 | 17 | - | MAP2K6 | 17 | - |
| exon-exon | KRT17 | 17 | - | KRT14 | 17 | - |
| exon-exon | KRT17 | 17 | - | KRT14 | 17 | - |
| exon-exon | KRT17 | 17 | - | KRT14 | 17 | - |
| exon-exon | KRT17 | 17 | - | KRT14 | 17 | - |
| exon-exon | KRT17 | 17 | - | KRT14 | 17 | - |
| exon-exon | KRT17 | 17 | - | KRT14 | 17 | - |
| exon-exon | KRT17 | 17 | - | KRT13 | 17 | - |
| exon-intron | KRT18 | 12 | + | LOC106096416 | 12 | + |
| intron-exon | KRT18 | 12 | - | KRT8 | 12 | - |
| exon-intron | KRT19 | 17 | - | HELLS | 10 | - |
| exon-intron | KRT20 | 17 | - | LOC105371777 | 17 | - |
| exon-intron | KRT23 | 17 | + | LOC107985072 | 17 | + |
| exon-exon | KRT4 | 12 | + | KRT4 | 12 | - |
| exon-exon | KRT4 | 12 | + | KRT4 | 12 | - |
| exon-exon | KRT4 | 12 | + | KRT4 | 12 | - |
| exon-exon | KRT4 | 12 | + | KRT4 | 12 | - |
| exon-exon | KRT4 | 12 | + | KRT4 | 12 | - |
| exon-exon | KRT4 | 12 | - | KRT6A | 12 | - |
| intron-exon | KRT43P | 17 | - | SELENOP | 5 | - |
| intron-exon | KRT43P | 17 | - | KRT35 | 17 | + |
| intron-exon | KRT43P | 17 | - | KRT35 | 17 | + |
| exon-exon | KRT5 | 12 | - | KRT6B | 12 | - |
| exon-exon | KRT5 | 12 | - | KRT6A | 12 | - |
| exon-exon | KRT5 | 12 | - | KRT6A | 12 | - |
| exon-exon | KRT6A | 12 | + | KRT5 | 12 | + |
| exon-exon | KRT6A | 12 | + | KRT5 | 12 | + |
| exon-exon | KRT6A | 12 | + | KRT6C | 12 | + |
| exon-exon | KRT6A | 12 | + | KRT5 | 12 | + |
| exon-exon | KRT6A | 12 | - | KRT6B | 12 | - |
| exon-exon | KRT6A | 12 | - | KRT6B | 12 | - |
| exon-exon | KRT6A | 12 | - | KRT6C | 12 | - |
| exon-exon | KRT6A | 12 | - | KRT6B | 12 | - |
| exon-exon | KRT6A | 12 | - | KRT6C | 12 | - |
| exon-exon | KRT6A | 12 | - | KRT6C | 12 | - |
| exon-exon | KRT6A | 12 | - | KRT6B | 12 | - |
| exon-exon | KRT6C | 12 | - | KRT6B | 12 | - |
| intron-exon | KRT7 | 12 | + | KRT86 | 12 | + |
| exon-exon | KRT7-AS | 12 | - | KRT7 | 12 | - |
| exon-exon | KRT7-AS | 12 | - | KRT7 | 12 | - |
| exon-exon | KRT7-AS | 12 | - | KRT7 | 12 | - |
| exon-exon | KRT7-AS | 12 | - | KRT7 | 12 | - |
| exon-exon | KRT7-AS | 12 | - | KRT7 | 12 | - |
| exon-exon | KRT7-AS | 12 | - | KRT7 | 12 | - |
| exon-exon | KRT7-AS | 12 | - | KRT7 | 12 | - |
| exon-exon | KRT7-AS | 12 | - | KRT7 | 12 | - |
| exon-intron | KRT8 | 12 | - | SUGCT | 7 | - |
| intron-exon | KRT87P | 12 | - | KRT7-AS | 12 | - |
| intron-exon | KRT87P | 12 | - | KRT7-AS | 12 | - |
| exon-intron | KRT8P3 | 8 | + | ASPH | 8 | - |
| exon-intron | KRTAP1-1 | 17 | - | KRTAP1-3 | 17 | - |
| exon-exon | KRTAP2-3 | 17 | - | KRTAP2-2 | 17 | - |
| exon-exon | KRTAP3-1 | 17 | + | RNA45SN2 | 21 | - |
| exon-exon | KRTAP4-7 | 17 | + | KRTAP4-9 | 17 | + |
| exon-exon | KRTAP9-2 | 17 | + | KRTAP9-9 | 17 | + |
| exon-exon | KRTAP9-6 | 17 | + | KRTAP9-7 | 17 | + |
| exon-intron | KRTCAP2 | 1 | + | TRIM46 | 1 | + |
| exon-exon | KSR1 | 17 | + | LGALS9 | 17 | + |
| exon-exon | KSR1 | 17 | + | LGALS9 | 17 | + |
| exon-exon | KSR1P1 | 10 | + | IGK | 2 | - |
| exon-exon | L1CAM | X | + | ARHGAP4 | X | + |
| exon-exon | L2HGDH | 14 | - | MBP | 18 | - |
| intron-exon | L2HGDH | 14 | - | LOC105378179 | 14 | - |
| exon-exon | L3MBTL1 | 20 | + | SGK2 | 20 | + |
| intron-exon | L3MBTL2 | 22 | + | CHADL | 22 | + |
| exon-intron | LAD1 | 1 | - | TNNT2 | 1 | - |
| intron-exon | LAD1 | 1 | - | LOC105379524 | 1 | + |
| intron-exon | LAMA3 | 18 | + | TTC39C | 18 | + |
| exon-exon | LAMA3 | 18 | + | LAMA3 | 18 | - |
| intron-exon | LAMA4-AS1 | 6 | - | LAMA4 | 6 | - |
| intron-exon | LAMA4-AS1 | 6 | - | LAMA4 | 6 | - |
| exon-exon | LAMA5 | 20 | - | ADRM1 | 20 | - |
| intron-exon | LAMC3 | 9 | + | RPL22 | 1 | - |
| exon-exon | LAMP1 | 13 | + | GRTP1 | 13 | + |
| exon-intron | LAMP2 | X | - | SPRY4-AS1 | 5 | - |
| exon-intron | LAPTM4B | 8 | + | HERC1 | 15 | + |
| exon-intron | LARP4B | 10 | + | STAM2 | 2 | + |
| exon-intron | LARS1 | 5 | + | DHRS3 | 1 | + |
| exon-exon | LARS1 | 5 | + | WAPL | 10 | - |
| intron-exon | LATS1 | 6 | + | SOCS7 | 17 | + |
| exon-exon | LBHD1 | 11 | + | CSKMT | 11 | + |
| exon-exon | LBHD1 | 11 | - | LBHD1 | 11 | + |
| intron-exon | LBHD1 | 11 | - | INTS5 | 11 | - |
| intron-exon | LCA10 | X | - | L1CAM | X | - |
| intron-exon | LCA10 | X | - | L1CAM | X | - |
| intron-exon | LCA10 | X | - | L1CAM | X | - |
| exon-intron | LCA5L | 21 | - | GET1-SH3BGR | 21 | - |
| exon-intron | LCN2 | 9 | + | AF131217.1 | 21 | - |
| exon-exon | LCN6 | 9 | - | LCN10 | 9 | - |
| exon-exon | LCORL | 4 | - | NCAPG | 4 | - |
| exon-exon | LCORL | 4 | - | NCAPG | 4 | - |
| exon-exon | LCORL | 4 | - | NCAPG | 4 | - |
| exon-exon | LCORL | 4 | - | NCAPG | 4 | - |
| exon-exon | LCORL | 4 | - | NCAPG | 4 | - |
| exon-exon | LCORL | 4 | - | NCAPG | 4 | - |
| exon-exon | LCORL | 4 | - | NCAPG | 4 | - |
| exon-exon | LCORL | 4 | - | NCAPG | 4 | - |
| exon-exon | LCORL | 4 | - | NCAPG | 4 | - |
| exon-exon | LCORL | 4 | - | NCAPG | 4 | - |
| exon-exon | LCORL | 4 | - | NCAPG | 4 | - |
| exon-exon | LCORL | 4 | - | NCAPG | 4 | - |
| exon-exon | LCORL | 4 | - | NCAPG | 4 | - |
| exon-exon | LCORL | 4 | - | NCAPG | 4 | - |
| exon-exon | LCORL | 4 | - | NCAPG | 4 | - |
| exon-exon | LCORL | 4 | - | NCAPG | 4 | - |
| exon-exon | LCORL | 4 | - | NCAPG | 4 | - |
| exon-exon | LCORL | 4 | - | NCAPG | 4 | - |
| exon-intron | LCP1 | 13 | + | SLC43A1 | 11 | + |
| exon-intron | LCP1 | 13 | + | KYAT1 | 9 | + |
| intron-exon | LCP1 | 13 | - | ARL17B | 17 | - |
| intron-exon | LCTL | 15 | - | ZWILCH | 15 | - |
| exon-intron | LDB1 | 10 | - | RBMS3 | 3 | - |
| exon-intron | LDB3 | 10 | + | MLLT10 | 10 | - |
| intron-exon | LDHAL6A | 11 | + | TSG101 | 11 | + |
| exon-intron | LEAP2 | 5 | + | LINC01733 | 20 | + |
| exon-intron | LEFTY2 | 1 | + | LOC105369801 | 12 | - |
| intron-exon | LEMD1-DT | 1 | - | BLACAT1 | 1 | - |
| exon-exon | LENG1 | 19 | - | CNOT3 | 19 | - |
| exon-exon | LENG1 | 19 | - | CNOT3 | 19 | - |
| exon-exon | LENG1 | 19 | - | CNOT3 | 19 | - |
| exon-exon | LENG1 | 19 | - | CNOT3 | 19 | - |
| exon-intron | LENG1 | 19 | - | CNOT3 | 19 | - |
| exon-exon | LENG8 | 19 | - | UCK2 | 1 | - |
| exon-intron | LEPROT | 1 | + | LEPR | 1 | + |
| exon-exon | LEPROTL1 | 8 | + | DCTN6 | 8 | + |
| exon-intron | LETMD1 | 12 | - | UBE2D2 | 5 | + |
| exon-intron | LGALS8-AS1 | 1 | - | LGALS8 | 1 | - |
| exon-exon | LGALS9 | 17 | + | VRK3 | 19 | - |
| exon-exon | LGALS9 | 17 | - | KSR1 | 17 | - |
| exon-exon | LGMN | 14 | - | ENO1 | 1 | - |
| exon-exon | LGR4-AS1 | 11 | - | LGR4 | 11 | - |
| exon-intron | LHCGR | 2 | - | STON1-GTF2A1L | 2 | - |
| exon-intron | LHFPL3-AS1 | 7 | - | LHFPL3 | 7 | - |
| exon-exon | LHFPL6 | 13 | + | PLEKHA2 | 8 | + |
| intron-exon | LHFPL6 | 13 | + | LOC105370170 | 13 | + |
| exon-exon | LHPP | 10 | + | LOC105378539 | 10 | + |
| exon-intron | LHX2 | 9 | + | LOC105377632 | 2 | - |
| exon-exon | LHX3 | 9 | - | DDB2 | 11 | + |
| intron-exon | LIFR | 5 | + | LIFR-AS1 | 5 | + |
| exon-intron | LIG1 | 19 | + | LOC107985293 | 19 | + |
| exon-exon | LILRA1 | 19 | + | RAB11B | 19 | - |
| exon-exon | LILRA6 | 19 | - | LILRB3 | 19 | - |
| exon-exon | LILRA6 | 19 | - | LILRB3 | 19 | - |
| intron-exon | LILRA6 | 19 | - | LILRB3 | 19 | - |
| intron-exon | LILRA6 | 19 | - | LILRB3 | 19 | - |
| intron-exon | LILRA6 | 19 | - | LILRB3 | 19 | - |
| intron-exon | LILRA6 | 19 | - | LILRB3 | 19 | - |
| intron-exon | LILRA6 | 19 | - | LILRB3 | 19 | - |
| intron-exon | LIMD2 | 17 | - | LOC101927898 | 17 | - |
| exon-exon | LIME1 | 20 | + | SLC2A4RG | 20 | + |
| exon-exon | LIME1 | 20 | - | ZGPAT | 20 | - |
| exon-exon | LIMK2 | 22 | - | RNF185 | 22 | - |
| exon-intron | LIMS1 | 2 | - | LOC105373547 | 2 | - |
| exon-intron | LIMS1 | 2 | - | LOC105373552 | 2 | + |
| exon-intron | LIMS1 | 2 | - | LOC105373552 | 2 | + |
| exon-exon | LIMS1 | 2 | - | LIMS4 | 2 | + |
| exon-intron | LIMS1 | 2 | - | LOC105373547 | 2 | - |
| exon-intron | LIMS1 | 2 | - | LOC105373547 | 2 | - |
| exon-intron | LIMS1 | 2 | - | LOC105373547 | 2 | - |
| exon-intron | LIMS1 | 2 | - | LOC105373547 | 2 | - |
| exon-exon | LIMS1 | 2 | - | LIMS4 | 2 | + |
| exon-exon | LIMS1 | 2 | - | LIMS4 | 2 | + |
| exon-intron | LIMS1 | 2 | - | LOC105373552 | 2 | + |
| exon-intron | LIMS1 | 2 | - | LOC105373547 | 2 | - |
| exon-intron | LIMS1 | 2 | - | LOC105373547 | 2 | - |
| exon-exon | LIMS4 | 2 | + | LIMS1 | 2 | - |
| exon-exon | LIMS4 | 2 | + | LIMS1 | 2 | - |
| intron-exon | LIMS4 | 2 | - | MALL | 2 | - |
| intron-exon | LIN28B | 6 | - | LIN28B-AS1 | 6 | - |
| exon-intron | LIN28B-AS1 | 6 | + | LIN28B | 6 | + |
| exon-intron | LINC00160 | 21 | + | LOC107985515 | 21 | + |
| intron-exon | LINC00200 | 10 | - | WDR37 | 10 | - |
| intron-exon | LINC00200 | 10 | - | WDR37 | 10 | - |
| intron-exon | LINC00200 | 10 | - | WDR37 | 10 | - |
| intron-exon | LINC00200 | 10 | - | WDR37 | 10 | - |
| intron-exon | LINC00200 | 10 | - | WDR37 | 10 | - |
| exon-exon | LINC00242 | 6 | + | LINC00574 | 6 | + |
| intron-exon | LINC00254 | 16 | - | MEIOB | 16 | - |
| exon-exon | LINC00345 | 13 | + | HNRNPA1L2 | 13 | + |
| exon-intron | LINC00390 | 13 | + | SMIM2-AS1 | 13 | + |
| exon-exon | LINC00395 | 13 | + | OR7E156P | 13 | + |
| exon-intron | LINC00444 | 13 | + | LOC105370198 | 13 | + |
| intron-exon | LINC00469 | 17 | + | LINC02092 | 17 | + |
| exon-intron | LINC00491 | 5 | - | LINC00492 | 5 | - |
| intron-exon | LINC00534 | 8 | + | LOC102724670 | 8 | + |
| intron-exon | LINC00535 | 8 | + | CIBAR1P1 | 15 | + |
| intron-exon | LINC00535 | 8 | + | CIBAR1P1 | 15 | + |
| exon-exon | LINC00537 | 9 | + | LOC105379251 | 9 | + |
| exon-exon | LINC00537 | 9 | + | CBWD6 | 9 | - |
| intron-exon | LINC00550 | 13 | + | LINC02342 | 13 | + |
| exon-intron | LINC00571 | 13 | + | UFM1 | 13 | + |
| exon-intron | LINC00602 | 6 | - | PDE10A | 6 | - |
| intron-exon | LINC00612 | 12 | - | KLRG1 | 12 | - |
| intron-exon | LINC00616 | 4 | + | SLC7A11-AS1 | 4 | + |
| intron-exon | LINC00620 | 3 | - | LOC100293612 | 3 | - |
| exon-intron | LINC00632 | X | + | CDR1 | X | + |
| exon-exon | LINC00632 | X | - | CDR1 | X | - |
| exon-exon | LINC00632 | X | - | CDR1 | X | - |
| exon-exon | LINC00632 | X | - | CDR1 | X | - |
| exon-exon | LINC00649 | 21 | - | ATP5PO | 21 | - |
| exon-exon | LINC00649 | 21 | - | ATP5PO | 21 | - |
| exon-exon | LINC00649 | 21 | - | ATP5PO | 21 | - |
| exon-exon | LINC00649 | 21 | - | ATP5PO | 21 | - |
| exon-exon | LINC00662 | 19 | + | LOC101927151 | 19 | + |
| intron-exon | LINC00662 | 19 | - | LOC105372345 | 19 | - |
| exon-exon | LINC00664 | 19 | + | ZNF429 | 19 | + |
| exon-intron | LINC00673 | 17 | + | LINC02210-CRHR1 | 17 | - |
| exon-intron | LINC00680 | 6 | - | GUSBP4 | 6 | - |
| exon-intron | LINC00680 | 6 | - | GUSBP4 | 6 | - |
| exon-exon | LINC00680 | 6 | - | GUSBP4 | 6 | - |
| exon-exon | LINC00680 | 6 | - | GUSBP4 | 6 | - |
| intron-exon | LINC00680-GUSBP4 | 6 | + | MICOS10 | 1 | - |
| intron-exon | LINC00824 | 8 | + | IDH3B | 20 | + |
| exon-exon | LINC00863 | 10 | - | NUTM2A-AS1 | 10 | - |
| exon-exon | LINC00880 | 3 | + | LINC02029 | 3 | + |
| intron-exon | LINC00882 | 3 | - | CD164 | 6 | - |
| exon-intron | LINC00893 | X | - | LOC106050103 | X | - |
| exon-exon | LINC00894 | X | + | LINC00893 | X | - |
| exon-intron | LINC00933 | 15 | - | UBE2Q2P1 | 15 | - |
| exon-exon | LINC00937 | 12 | - | LOC112268090 | 12 | - |
| exon-intron | LINC00958 | 11 | - | TAOK3 | 12 | - |
| exon-intron | LINC01000 | 7 | - | LOC101928451 | 7 | - |
| exon-intron | LINC01002 | 19 | + | LOC101928344 | 19 | + |
| intron-exon | LINC01002 | 19 | + | LOC105377771 | 5 | - |
| exon-exon | LINC01006 | 7 | - | LOC105375599 | 7 | - |
| exon-exon | LINC01014 | 3 | + | KCNMB2 | 3 | + |
| exon-intron | LINC01061 | 4 | + | LOC107983979 | 4 | + |
| exon-exon | LINC01089 | 12 | - | RHOF | 12 | - |
| exon-exon | LINC01089 | 12 | - | RHOF | 12 | - |
| exon-intron | LINC01091 | 4 | - | AC093821.1 | 4 | - |
| exon-exon | LINC01117 | 2 | - | LINC01116 | 2 | - |
| exon-exon | LINC01117 | 2 | - | LINC01116 | 2 | - |
| exon-exon | LINC01123 | 2 | + | MGAT4C | 12 | - |
| intron-exon | LINC01146 | 14 | - | LINC01147 | 14 | - |
| exon-intron | LINC01184 | 5 | - | NUP155 | 5 | + |
| exon-intron | LINC01194 | 5 | + | LOC105374657 | 5 | + |
| exon-intron | LINC01195 | 16 | - | LOC101927026 | 16 | - |
| intron-exon | LINC01218 | 4 | - | EMCN | 4 | - |
| intron-exon | LINC01228 | 16 | - | LINC01229 | 16 | - |
| exon-intron | LINC01278 | X | - | RAB7A | 3 | + |
| exon-exon | LINC01297-DUXAP10-NBEAP6 | 14 | + | LINC01297-DUXAP10-NBEAP6 | 14 | + |
| exon-exon | LINC01297-DUXAP10-NBEAP6 | 14 | + | LINC01297-DUXAP10-NBEAP6 | 14 | + |
| intron-exon | LINC01322 | 3 | - | DCTPP1 | 16 | + |
| intron-exon | LINC01331 | 5 | + | GTF3A | 13 | + |
| exon-intron | LINC01350 | 1 | - | LOC107985239 | 1 | - |
| exon-intron | LINC01351 | 1 | - | BRINP3 | 1 | - |
| exon-intron | LINC01411 | 5 | + | LOC105377739 | 5 | + |
| intron-exon | LINC01414 | 8 | - | LOC105369896 | 12 | + |
| intron-exon | LINC01440 | 20 | + | NCAPD2 | 12 | + |
| exon-intron | LINC01460 | 2 | + | BABAM2 | 2 | + |
| intron-exon | LINC01476 | 17 | + | LOC105371845 | 17 | + |
| exon-exon | LINC01578 | 15 | + | CHD2 | 15 | + |
| exon-exon | LINC01586 | 15 | + | AEN | 15 | + |
| intron-exon | LINC01599 | 14 | - | LOC105378179 | 14 | - |
| exon-intron | LINC01622 | 6 | + | AL033381.1 | 6 | + |
| exon-intron | LINC01638 | 22 | - | KDM2A | 11 | + |
| exon-exon | LINC01715 | 1 | + | HBS1L | 6 | - |
| exon-intron | LINC01719 | 1 | + | MN1 | 22 | + |
| exon-exon | LINC01730 | 20 | + | AP5S1 | 20 | + |
| exon-intron | LINC01731 | 1 | + | LINC01138 | 1 | - |
| exon-intron | LINC01836 | 19 | - | PALM | 19 | - |
| exon-intron | LINC01836 | 19 | - | PALM | 19 | - |
| intron-exon | LINC01870 | 2 | - | RFX8 | 2 | - |
| exon-exon | LINC01881 | 2 | + | FRYL | 4 | - |
| exon-intron | LINC01888 | 2 | - | LINC01890 | 2 | - |
| intron-exon | LINC01901 | 18 | - | LINC01902 | 18 | - |
| intron-exon | LINC01989 | 17 | + | CMBL | 5 | - |
| exon-intron | LINC02050 | 3 | - | LOC105377177 | 3 | - |
| intron-exon | LINC02060 | 5 | - | TMEM161B-AS1 | 5 | - |
| exon-exon | LINC02112 | 5 | - | TAS2R1 | 5 | - |
| intron-exon | LINC02137 | 16 | + | NDRG4 | 16 | + |
| exon-intron | LINC02153 | 8 | - | LOC105379316 | 8 | - |
| exon-intron | LINC02158 | 3 | - | CCDC13 | 3 | - |
| exon-exon | LINC02158 | 3 | - | CCDC13 | 3 | - |
| exon-intron | LINC02203 | 15 | + | OR4N2 | 14 | + |
| intron-exon | LINC02203 | 15 | + | LOC105369274 | 15 | + |
| intron-exon | LINC02203 | 15 | - | MCM4 | 8 | - |
| exon-intron | LINC02210 | 17 | + | CRHR1 | 17 | + |
| exon-exon | LINC02210 | 17 | + | CRHR1 | 17 | + |
| exon-intron | LINC02257 | 1 | + | LINC02474 | 1 | + |
| exon-exon | LINC02272 | 4 | - | FAP | 2 | - |
| intron-exon | LINC02340 | 13 | - | USP12-AS2 | 13 | - |
| intron-exon | LINC02347 | 12 | - | LINC02825 | 12 | - |
| intron-exon | LINC02381 | 12 | + | CCDC149 | 4 | - |
| exon-exon | LINC02384 | 12 | - | LOC105369819 | 12 | - |
| intron-exon | LINC02474 | 1 | - | LINC02257 | 1 | - |
| exon-intron | LINC02478 | 2 | - | AC092153.1 | 2 | - |
| intron-exon | LINC02492 | 4 | - | LOC105377604 | 4 | - |
| exon-exon | LINC02541 | 6 | - | AZI2 | 3 | - |
| exon-intron | LINC02571 | 6 | + | LOC112267902 | 6 | + |
| exon-exon | LINC02583 | 2 | + | TMEM247 | 2 | + |
| intron-exon | LINC02679 | 10 | - | LOC642361 | 10 | + |
| intron-exon | LINC02777 | 1 | + | LINC01358 | 1 | + |
| intron-exon | LINC02882 | 12 | + | LINC00649 | 21 | + |
| exon-intron | LINGO1 | 15 | - | LOC105370906 | 15 | - |
| intron-exon | LINGO2 | 9 | + | LOC646700 | 9 | + |
| exon-exon | LIPA | 10 | - | ELK4 | 1 | + |
| intron-exon | LIPC | 15 | + | MINDY2 | 15 | + |
| intron-exon | LIPC | 15 | - | ALDH1A2 | 15 | - |
| exon-intron | LIPE-AS1 | 19 | + | CEACAMP5 | 19 | + |
| exon-exon | LIX1L | 1 | - | KIF1A | 2 | - |
| exon-exon | LIX1L-AS1 | 1 | - | RBM8A | 1 | - |
| exon-exon | LIX1L-AS1 | 1 | - | RBM8A | 1 | - |
| exon-exon | LIX1L-AS1 | 1 | - | RBM8A | 1 | - |
| exon-exon | LIX1L-AS1 | 1 | - | RBM8A | 1 | - |
| exon-exon | LIX1L-AS1 | 1 | - | RBM8A | 1 | - |
| exon-exon | LIX1L-AS1 | 1 | - | RBM8A | 1 | - |
| exon-intron | LL22NC03-13G6.2 | 22 | - | LINC01643 | 22 | - |
| exon-intron | LL22NC03-13G6.2 | 22 | - | LINC01643 | 22 | - |
| exon-intron | LL22NC03-63E9.3 | 22 | + | IGL | 22 | + |
| exon-exon | LMAN2 | 5 | - | MXD3 | 5 | - |
| exon-intron | LMF1 | 16 | + | LOC107987382 | 16 | + |
| exon-intron | LMF1 | 16 | + | LOC107987382 | 16 | + |
| intron-exon | LMNTD2 | 11 | + | RASSF7 | 11 | + |
| exon-intron | LMO4 | 1 | - | EP400 | 12 | - |
| exon-intron | LMO7 | 13 | - | MUC4 | 3 | + |
| exon-intron | LMO7 | 13 | - | CDC14B | 9 | - |
| intron-exon | LMO7-AS1 | 13 | - | UCHL3 | 13 | - |
| intron-exon | LMO7-AS1 | 13 | - | UCHL3 | 13 | - |
| intron-exon | LMO7-AS1 | 13 | - | UCHL3 | 13 | - |
| intron-exon | LMO7-AS1 | 13 | - | UCHL3 | 13 | - |
| intron-exon | LMO7-AS1 | 13 | - | UCHL3 | 13 | - |
| intron-exon | LMO7-AS1 | 13 | - | UCHL3 | 13 | - |
| intron-exon | LMO7-AS1 | 13 | - | UCHL3 | 13 | - |
| intron-exon | LMO7-AS1 | 13 | - | UCHL3 | 13 | - |
| intron-exon | LMO7-AS1 | 13 | - | UCHL3 | 13 | - |
| intron-exon | LMO7-AS1 | 13 | - | UCHL3 | 13 | - |
| intron-exon | LMO7-AS1 | 13 | - | UCHL3 | 13 | - |
| intron-exon | LMO7-AS1 | 13 | - | UCHL3 | 13 | - |
| intron-exon | LMO7-AS1 | 13 | - | UCHL3 | 13 | - |
| intron-exon | LMO7-AS1 | 13 | - | UCHL3 | 13 | - |
| intron-exon | LMO7-AS1 | 13 | - | UCHL3 | 13 | - |
| intron-exon | LMO7-AS1 | 13 | - | UCHL3 | 13 | - |
| intron-exon | LMO7-AS1 | 13 | - | UCHL3 | 13 | - |
| intron-exon | LMO7-AS1 | 13 | - | UCHL3 | 13 | - |
| intron-exon | LMO7-AS1 | 13 | - | UCHL3 | 13 | - |
| intron-exon | LMO7-AS1 | 13 | - | UCHL3 | 13 | - |
| intron-exon | LMO7-AS1 | 13 | - | UCHL3 | 13 | - |
| intron-exon | LMO7-AS1 | 13 | - | UCHL3 | 13 | - |
| intron-exon | LMO7-AS1 | 13 | - | UCHL3 | 13 | - |
| intron-exon | LMO7-AS1 | 13 | - | UCHL3 | 13 | - |
| intron-exon | LMO7-AS1 | 13 | - | UCHL3 | 13 | - |
| intron-exon | LMO7-AS1 | 13 | - | UCHL3 | 13 | - |
| intron-exon | LMO7-AS1 | 13 | - | UCHL3 | 13 | - |
| intron-exon | LMO7-AS1 | 13 | - | UCHL3 | 13 | - |
| intron-exon | LMO7-AS1 | 13 | - | UCHL3 | 13 | - |
| intron-exon | LMO7-AS1 | 13 | - | UCHL3 | 13 | - |
| intron-exon | LMO7-AS1 | 13 | - | UCHL3 | 13 | - |
| intron-exon | LMO7-AS1 | 13 | - | UCHL3 | 13 | - |
| intron-exon | LMO7-AS1 | 13 | - | UCHL3 | 13 | - |
| exon-intron | LMOD1 | 1 | + | TXLNB | 6 | + |
| exon-exon | LNCOC1 | 8 | - | LY6K | 8 | - |
| exon-intron | LNCTAM34A | 1 | - | PRKG1-AS1 | 10 | + |
| exon-intron | LNPK | 2 | - | CKAP5 | 11 | + |
| exon-intron | LNX1 | 4 | + | LNX1-AS1 | 4 | + |
| exon-intron | LNX1 | 4 | + | LNX1-AS1 | 4 | + |
| exon-exon | LNX1 | 4 | - | FIP1L1 | 4 | - |
| exon-exon | LNX1 | 4 | - | FIP1L1 | 4 | - |
| exon-exon | LNX1 | 4 | - | FIP1L1 | 4 | - |
| exon-exon | LNX1 | 4 | - | FIP1L1 | 4 | - |
| exon-exon | LNX1 | 4 | - | FIP1L1 | 4 | - |
| exon-exon | LNX1 | 4 | - | FIP1L1 | 4 | - |
| exon-exon | LNX1 | 4 | - | FIP1L1 | 4 | - |
| exon-exon | LNX1 | 4 | - | FIP1L1 | 4 | - |
| exon-exon | LNX1 | 4 | - | FIP1L1 | 4 | - |
| exon-exon | LNX1 | 4 | - | FIP1L1 | 4 | - |
| exon-exon | LNX1 | 4 | - | FIP1L1 | 4 | - |
| exon-exon | LNX1 | 4 | - | FIP1L1 | 4 | - |
| exon-exon | LNX1 | 4 | - | FIP1L1 | 4 | - |
| exon-exon | LNX1 | 4 | - | FIP1L1 | 4 | - |
| exon-exon | LNX1 | 4 | - | FIP1L1 | 4 | - |
| exon-exon | LNX1 | 4 | - | FIP1L1 | 4 | - |
| exon-exon | LNX1 | 4 | - | FIP1L1 | 4 | - |
| exon-exon | LNX1 | 4 | - | FIP1L1 | 4 | - |
| exon-exon | LNX1 | 4 | - | FIP1L1 | 4 | - |
| exon-exon | LNX1 | 4 | - | FIP1L1 | 4 | - |
| exon-intron | LOC100128253 | 12 | - | AC005865.1 | 12 | - |
| exon-intron | LOC100128253 | 12 | - | AC005865.1 | 12 | - |
| exon-intron | LOC100128253 | 12 | - | AC005865.1 | 12 | - |
| intron-exon | LOC100128882 | 16 | - | ZFPM1 | 16 | - |
| exon-intron | LOC100128966 | 5 | + | FAM53C | 5 | + |
| exon-exon | LOC100129034 | 9 | + | PSMB7 | 9 | + |
| intron-exon | LOC100129148 | 7 | - | LUC7L2 | 7 | - |
| intron-exon | LOC100129203 | 11 | - | SESN3 | 11 | - |
| exon-exon | LOC100129358 | 22 | + | DDTL | 22 | + |
| intron-exon | LOC100129917 | 4 | + | PCGF3 | 4 | + |
| intron-exon | LOC100129931 | 4 | + | TADA2B | 4 | + |
| exon-exon | LOC100129931 | 4 | - | TBC1D14 | 4 | - |
| exon-exon | LOC100129931 | 4 | - | TBC1D14 | 4 | - |
| exon-exon | LOC100130027 | 8 | - | ZNF517 | 8 | - |
| exon-exon | LOC100130180 | 16 | - | MYLK3 | 16 | - |
| intron-exon | LOC100130691 | 2 | - | NFE2L2 | 2 | - |
| intron-exon | LOC100130691 | 2 | - | NFE2L2 | 2 | - |
| exon-intron | LOC100130691 | 2 | - | NFE2L2 | 2 | - |
| exon-exon | LOC100130691 | 2 | - | NFE2L2 | 2 | - |
| exon-exon | LOC100130691 | 2 | - | NFE2L2 | 2 | - |
| exon-exon | LOC100130691 | 2 | - | NFE2L2 | 2 | - |
| exon-exon | LOC100130691 | 2 | - | NFE2L2 | 2 | - |
| exon-exon | LOC100130691 | 2 | - | NFE2L2 | 2 | - |
| exon-intron | LOC100130987 | 11 | + | RAD9A | 11 | + |
| exon-intron | LOC100131294 | 12 | - | VPS13B | 8 | - |
| intron-exon | LOC100131626 | 11 | + | ATP5MG | 11 | + |
| intron-exon | LOC100131626 | 11 | + | ATP5MG | 11 | + |
| intron-exon | LOC100131626 | 11 | - | UBE4A | 11 | - |
| exon-intron | LOC100131635 | 3 | + | BCL6 | 3 | + |
| exon-intron | LOC100132057 | 1 | - | LOC105370032 | 12 | + |
| exon-intron | LOC100132062 | 5 | - | AL732372.2 | 1 | + |
| exon-exon | LOC100132077 | 9 | - | MFSD14C | 9 | + |
| exon-exon | LOC100132215 | 2 | - | EHBP1 | 2 | - |
| intron-exon | LOC100132215 | 2 | - | EHBP1 | 2 | - |
| intron-exon | LOC100132215 | 2 | - | EHBP1 | 2 | - |
| exon-intron | LOC100132287 | 1 | + | AL732372.2 | 1 | + |
| exon-intron | LOC100133091 | 7 | + | WAPL | 10 | + |
| exon-exon | LOC100133286 | 21 | + | CBR1 | 21 | + |
| intron-exon | LOC100133286 | 21 | + | LOC105369306 | 21 | + |
| exon-intron | LOC100133331 | 1 | + | AL732372.2 | 1 | + |
| exon-exon | LOC100133331 | 1 | + | LOC101928626 | 1 | + |
| exon-intron | LOC100133331 | 1 | + | LOC107984841 | 1 | + |
| exon-intron | LOC100134317 | 19 | - | AC092296.2 | 19 | - |
| intron-exon | LOC100144595 | 2 | - | GALNT13 | 2 | - |
| exon-intron | LOC100190986 | 16 | - | NPIPB3 | 16 | - |
| exon-exon | LOC100287049 | 1 | - | DCAF8 | 1 | - |
| exon-exon | LOC100287049 | 1 | - | DCAF8 | 1 | - |
| exon-exon | LOC100287049 | 1 | - | DCAF8 | 1 | - |
| exon-exon | LOC100287049 | 1 | - | DCAF8 | 1 | - |
| exon-exon | LOC100287049 | 1 | - | DCAF8 | 1 | - |
| exon-exon | LOC100287049 | 1 | - | DCAF8 | 1 | - |
| exon-exon | LOC100287049 | 1 | - | DCAF8 | 1 | - |
| exon-intron | LOC100287175 | 16 | + | LOC102723945 | 16 | + |
| exon-exon | LOC100287290 | 3 | + | MFSD1 | 3 | + |
| intron-exon | LOC100287290 | 3 | + | MFSD1 | 3 | + |
| exon-exon | LOC100287402 | 3 | + | STXBP2 | 19 | + |
| exon-exon | LOC100287467 | 6 | - | DSE | 6 | - |
| exon-exon | LOC100287467 | 6 | - | DSE | 6 | - |
| exon-exon | LOC100287467 | 6 | - | DSE | 6 | - |
| exon-exon | LOC100287467 | 6 | - | DSE | 6 | - |
| exon-exon | LOC100287467 | 6 | - | DSE | 6 | - |
| exon-exon | LOC100287825 | 7 | + | GARS1-DT | 7 | + |
| intron-exon | LOC100287944 | 12 | + | RFX4 | 12 | + |
| intron-exon | LOC100287944 | 12 | + | RFX4 | 12 | + |
| exon-intron | LOC100288203 | 15 | + | CTD-3092A11.1 | 15 | + |
| exon-intron | LOC100288203 | 15 | - | CTD-3092A11.1 | 15 | - |
| exon-exon | LOC100288560 | X | - | MRPS18C | 4 | - |
| intron-exon | LOC100288866 | 17 | - | NGFR | 17 | - |
| exon-intron | LOC100289333 | 19 | + | LOC107984139 | 19 | + |
| exon-intron | LOC100289333 | 19 | + | LOC107984139 | 19 | + |
| exon-exon | LOC100289333 | 19 | + | ZNF44 | 19 | + |
| exon-exon | LOC100289561 | 7 | + | PRKRIP1 | 7 | + |
| exon-exon | LOC100289561 | 7 | + | PRKRIP1 | 7 | + |
| exon-exon | LOC100289561 | 7 | + | PRKRIP1 | 7 | + |
| intron-exon | LOC100418714 | 7 | - | PHKG1P1 | 7 | - |
| intron-exon | LOC100419238 | X | - | LOC105373204 | X | - |
| exon-exon | LOC100419579 | 15 | - | HERC2 | 15 | + |
| exon-intron | LOC100419583 | 15 | + | TRIM69 | 15 | + |
| intron-exon | LOC100419583 | 15 | + | TRIM69 | 15 | + |
| exon-exon | LOC100419798 | 1 | - | MSTO1 | 1 | - |
| exon-exon | LOC100419824 | 9 | + | LOC101927552 | 9 | - |
| exon-intron | LOC100419920 | 2 | + | AC009237.3 | 2 | + |
| intron-exon | LOC100420006 | 2 | - | FAR2P4 | 2 | - |
| intron-exon | LOC100420171 | 14 | + | USP10P1 | 14 | + |
| exon-intron | LOC100420758 | X | - | TAF1 | X | - |
| intron-exon | LOC100420851 | 17 | + | CCL4 | 17 | + |
| intron-exon | LOC100421207 | 11 | + | SLCO2B1 | 11 | + |
| intron-exon | LOC100422556 | 15 | + | LOC112268148 | 15 | + |
| intron-exon | LOC100422556 | 15 | + | LOC112268148 | 15 | + |
| exon-exon | LOC100422781 | 6 | - | TUBB2B | 6 | - |
| exon-exon | LOC100422781 | 6 | - | TUBB2A | 6 | - |
| exon-exon | LOC100505555 | 19 | - | ZNF846 | 19 | - |
| exon-exon | LOC100505728 | 1 | + | MSTO2P | 1 | + |
| exon-exon | LOC100505728 | 1 | + | MSTO2P | 1 | + |
| exon-exon | LOC100505728 | 1 | + | MSTO2P | 1 | + |
| intron-exon | LOC100505774 | 2 | + | LOC112267877 | 2 | + |
| exon-intron | LOC100506023 | 1 | - | TNFSF4 | 1 | - |
| intron-exon | LOC100506207 | 6 | - | LOC107986562 | 6 | - |
| intron-exon | LOC100506207 | 6 | - | LOC107986562 | 6 | - |
| exon-intron | LOC100506282 | 11 | + | ANKRD42 | 11 | + |
| exon-intron | LOC100506403 | 21 | - | CACNA1A | 19 | - |
| intron-exon | LOC100506446 | 14 | - | LOC105378179 | 14 | - |
| intron-exon | LOC100506497 | 7 | + | CPVL | 7 | + |
| exon-exon | LOC100506639 | 5 | + | ZNF131 | 5 | + |
| exon-intron | LOC100506955 | X | + | BX119904.2 | X | + |
| exon-intron | LOC100506990 | 8 | + | LOC729732 | 8 | + |
| intron-exon | LOC100506990 | 8 | + | DCTN1 | 2 | - |
| exon-exon | LOC100507065 | 12 | - | MSRB3 | 12 | - |
| intron-exon | LOC100507065 | 12 | - | MSRB3 | 12 | - |
| intron-exon | LOC100507103 | 9 | + | LOC105376144 | 9 | + |
| intron-exon | LOC100507156 | 8 | + | SLC25A37 | 8 | + |
| exon-intron | LOC100507387 | 5 | + | LOC107986487 | 5 | + |
| intron-exon | LOC100507513 | 14 | + | RNASE3 | 14 | + |
| exon-exon | LOC100507547 | 6 | + | PPT2-EGFL8 | 6 | + |
| exon-exon | LOC100507547 | 6 | + | PPT2-EGFL8 | 6 | + |
| exon-exon | LOC100507547 | 6 | - | PRRT1 | 6 | - |
| exon-exon | LOC100507547 | 6 | - | PRRT1 | 6 | - |
| exon-intron | LOC100507547 | 6 | - | PRRT1 | 6 | - |
| exon-intron | LOC100507547 | 6 | - | PRRT1 | 6 | - |
| intron-exon | LOC100507551 | 19 | - | SLC27A1 | 19 | - |
| intron-exon | LOC100507551 | 19 | - | SLC27A1 | 19 | - |
| intron-exon | LOC100507551 | 19 | - | SLC27A1 | 19 | - |
| intron-exon | LOC100652758 | 5 | + | G3BP1 | 5 | + |
| exon-exon | LOC100652758 | 5 | - | MAGT1 | X | - |
| intron-exon | LOC100652777 | 16 | - | NPIPA3 | 16 | - |
| intron-exon | LOC100996351 | 19 | - | GNA15 | 19 | - |
| exon-exon | LOC100996419 | 5 | + | MRNIP | 5 | + |
| intron-exon | LOC100996442 | 1 | - | WASH9P | 1 | - |
| intron-exon | LOC100996442 | 1 | - | WASH9P | 1 | - |
| intron-exon | LOC100996723 | 1 | + | LOC105378954 | 1 | + |
| exon-intron | LOC100996723 | 1 | + | AC245297.3 | 1 | - |
| intron-exon | LOC100996736 | 1 | + | LINC02802 | 1 | + |
| intron-exon | LOC100996737 | 1 | - | LINC02802 | 1 | + |
| exon-exon | LOC100996842 | 17 | - | CD68 | 17 | - |
| exon-exon | LOC100996842 | 17 | - | RCC2 | 1 | + |
| exon-exon | LOC100996842 | 17 | - | CD68 | 17 | - |
| exon-exon | LOC101926887 | 10 | - | LIPA | 10 | - |
| exon-exon | LOC101926887 | 10 | - | LIPA | 10 | - |
| exon-exon | LOC101926887 | 10 | - | LIPA | 10 | - |
| exon-exon | LOC101926887 | 10 | - | LIPA | 10 | - |
| exon-exon | LOC101926887 | 10 | - | LIPA | 10 | - |
| exon-exon | LOC101926887 | 10 | - | LIPA | 10 | - |
| exon-exon | LOC101926887 | 10 | - | LIPA | 10 | - |
| exon-exon | LOC101926887 | 10 | - | LIPA | 10 | - |
| exon-exon | LOC101926887 | 10 | - | LIPA | 10 | - |
| exon-exon | LOC101926887 | 10 | - | LIPA | 10 | - |
| exon-exon | LOC101926887 | 10 | - | LIPA | 10 | - |
| exon-exon | LOC101926887 | 10 | - | LIPA | 10 | - |
| intron-exon | LOC101926905 | 5 | + | PCDHB1 | 5 | + |
| intron-exon | LOC101926934 | 6 | - | SLC25A27 | 6 | - |
| intron-exon | LOC101926934 | 6 | - | SLC25A27 | 6 | - |
| intron-exon | LOC101926934 | 6 | - | SLC25A27 | 6 | - |
| intron-exon | LOC101926934 | 6 | - | SLC25A27 | 6 | - |
| intron-exon | LOC101926934 | 6 | - | SLC25A27 | 6 | - |
| intron-exon | LOC101926943 | 7 | - | GTF2I | 7 | - |
| exon-exon | LOC101926948 | 9 | - | CD72 | 9 | - |
| exon-exon | LOC101926948 | 9 | - | CD72 | 9 | - |
| exon-exon | LOC101926948 | 9 | - | CD72 | 9 | - |
| intron-exon | LOC101926967 | 17 | - | ATXN7L3 | 17 | - |
| intron-exon | LOC101926967 | 17 | - | ATXN7L3 | 17 | - |
| intron-exon | LOC101926967 | 17 | - | ATXN7L3 | 17 | - |
| intron-exon | LOC101926967 | 17 | - | ATXN7L3 | 17 | - |
| exon-intron | LOC101926984 | 17 | - | AC061975.4 | 17 | - |
| exon-intron | LOC101927039 | 8 | - | UQCRB | 8 | - |
| exon-intron | LOC101927039 | 8 | - | UQCRB | 8 | - |
| intron-exon | LOC101927048 | 6 | - | LOC101927020 | 6 | - |
| intron-exon | LOC101927066 | 8 | - | CPQ | 8 | - |
| intron-exon | LOC101927066 | 8 | - | CPQ | 8 | - |
| intron-exon | LOC101927066 | 8 | - | CPQ | 8 | - |
| intron-exon | LOC101927066 | 8 | - | CPQ | 8 | - |
| exon-exon | LOC101927136 | 6 | - | GCLC | 6 | - |
| intron-exon | LOC101927145 | 4 | - | ADGRL3-AS1 | 4 | - |
| intron-exon | LOC101927145 | 4 | - | ADGRL3-AS1 | 4 | - |
| exon-exon | LOC101927151 | 19 | - | LINC00662 | 19 | - |
| intron-exon | LOC101927179 | 4 | - | CORIN | 4 | - |
| exon-exon | LOC101927189 | 6 | + | MLIP | 6 | + |
| exon-exon | LOC101927200 | 20 | + | LOC105372625 | 20 | + |
| exon-intron | LOC101927209 | 4 | + | LOC102723769 | 22 | - |
| exon-intron | LOC101927209 | 4 | + | LOC102723769 | 22 | - |
| exon-intron | LOC101927209 | 4 | + | LOC102723769 | 22 | - |
| exon-exon | LOC101927241 | 12 | + | CACNB3 | 12 | + |
| exon-intron | LOC101927262 | 2 | + | LOC105373346 | 2 | + |
| intron-exon | LOC101927267 | 12 | + | TROAP | 12 | + |
| exon-intron | LOC101927300 | 10 | + | FN3K | 17 | - |
| intron-exon | LOC101927318 | 12 | + | AQP5 | 12 | + |
| exon-intron | LOC101927318 | 12 | + | AQP5 | 12 | + |
| exon-exon | LOC101927345 | 21 | - | LOC101930100 | 21 | - |
| exon-exon | LOC101927393 | 22 | + | PACSIN2 | 22 | + |
| exon-exon | LOC101927410 | 18 | + | PIEZO2 | 18 | + |
| intron-exon | LOC101927441 | 1 | - | FHAD1 | 1 | - |
| exon-exon | LOC101927461 | 10 | - | SYN3 | 22 | - |
| exon-exon | LOC101927461 | 10 | - | SYN3 | 22 | - |
| intron-exon | LOC101927479 | 1 | - | EPHA2 | 1 | - |
| intron-exon | LOC101927479 | 1 | - | EPHA2 | 1 | - |
| exon-intron | LOC101927522 | 19 | - | DNAJC7 | 17 | - |
| exon-intron | LOC101927533 | 2 | - | MGLL | 3 | + |
| intron-exon | LOC101927552 | 9 | - | GKAP1 | 9 | - |
| intron-exon | LOC101927556 | 16 | + | CSNK2A2 | 16 | + |
| exon-exon | LOC101927609 | 7 | + | AHR | 7 | + |
| intron-exon | LOC101927630 | 7 | - | KCCAT333 | 7 | - |
| exon-intron | LOC101927636 | 4 | + | FREM3 | 4 | + |
| exon-exon | LOC101927636 | 4 | - | GUSBP5 | 4 | - |
| intron-exon | LOC101927756 | 14 | - | SLC38A6 | 14 | - |
| intron-exon | LOC101927756 | 14 | - | SLC38A6 | 14 | - |
| exon-exon | LOC101927764 | 2 | - | TMEM177 | 2 | - |
| exon-exon | LOC101927811 | 7 | + | ITGB8 | 7 | + |
| intron-exon | LOC101927824 | 10 | + | PFKP | 10 | + |
| exon-exon | LOC101928002 | 12 | + | RAB3IP | 12 | + |
| exon-intron | LOC101928004 | 6 | - | AL031123.1 | 6 | - |
| exon-exon | LOC101928005 | 5 | + | PKD2L2 | 5 | + |
| exon-intron | LOC101928005 | 5 | - | AC106791.1 | 5 | - |
| intron-exon | LOC101928034 | 1 | - | S100A4 | 1 | - |
| exon-intron | LOC101928041 | 22 | + | LOC102723769 | 22 | + |
| intron-exon | LOC101928118 | 1 | - | TLCD4-RWDD3 | 1 | - |
| intron-exon | LOC101928118 | 1 | - | TLCD4-RWDD3 | 1 | - |
| intron-exon | LOC101928118 | 1 | - | TLCD4-RWDD3 | 1 | - |
| intron-exon | LOC101928119 | 9 | - | AOPEP | 9 | - |
| exon-exon | LOC101928120 | 1 | - | PYGO2 | 1 | - |
| exon-exon | LOC101928120 | 1 | - | PYGO2 | 1 | - |
| exon-exon | LOC101928120 | 1 | - | PYGO2 | 1 | - |
| exon-exon | LOC101928120 | 1 | - | PYGO2 | 1 | - |
| exon-exon | LOC101928120 | 1 | - | PYGO2 | 1 | - |
| exon-exon | LOC101928120 | 1 | - | PYGO2 | 1 | - |
| exon-exon | LOC101928143 | 14 | - | NUMB | 14 | - |
| exon-intron | LOC101928143 | 14 | - | NUMB | 14 | - |
| exon-exon | LOC101928156 | 2 | - | RPL37A | 2 | - |
| exon-exon | LOC101928156 | 2 | - | RPL37A | 2 | - |
| exon-exon | LOC101928156 | 2 | - | RPL37A | 2 | - |
| intron-exon | LOC101928156 | 2 | - | RPL37A | 2 | - |
| intron-exon | LOC101928156 | 2 | - | RPL37A | 2 | - |
| intron-exon | LOC101928156 | 2 | - | RPL37A | 2 | - |
| exon-exon | LOC101928180 | 2 | - | RPL37A | 2 | - |
| exon-exon | LOC101928188 | 16 | - | RRN3P2 | 16 | - |
| exon-intron | LOC101928188 | 16 | - | RRN3P2 | 16 | - |
| intron-exon | LOC101928216 | 1 | + | EXTL1 | 1 | + |
| intron-exon | LOC101928236 | 3 | + | VEPH1 | 3 | + |
| exon-exon | LOC101928269 | 21 | - | LOC100506403 | 21 | - |
| exon-exon | LOC101928274 | 12 | - | VSIG10 | 12 | - |
| exon-exon | LOC101928274 | 12 | - | VSIG10 | 12 | - |
| exon-exon | LOC101928274 | 12 | - | VSIG10 | 12 | - |
| intron-exon | LOC101928295 | 19 | - | DKKL1 | 19 | - |
| exon-exon | LOC101928344 | 19 | - | LINC01002 | 19 | - |
| exon-exon | LOC101928344 | 19 | - | LINC01002 | 19 | - |
| intron-exon | LOC101928344 | 19 | - | LINC01002 | 19 | - |
| exon-exon | LOC101928383 | 4 | + | SCRG1 | 4 | + |
| exon-exon | LOC101928415 | X | - | PHKA2 | X | - |
| intron-exon | LOC101928491 | 6 | - | CAP2 | 6 | - |
| exon-exon | LOC101928535 | 11 | - | ZNF669 | 1 | + |
| exon-exon | LOC101928551 | 4 | + | ADAM29 | 4 | + |
| exon-intron | LOC101928573 | 6 | - | MBOAT1 | 6 | - |
| intron-exon | LOC101928626 | 1 | + | FAM87B | 1 | + |
| intron-exon | LOC101928626 | 1 | - | COX1 | MT | - |
| intron-exon | LOC101928626 | 1 | - | COX1 | MT | - |
| intron-exon | LOC101928626 | 1 | - | COX1 | MT | - |
| intron-exon | LOC101928626 | 1 | - | COX1 | MT | - |
| intron-exon | LOC101928626 | 1 | - | LOC107984841 | 1 | - |
| exon-exon | LOC101928628 | 1 | - | SELE | 1 | - |
| exon-exon | LOC101928628 | 1 | - | SELE | 1 | - |
| intron-exon | LOC101928674 | 17 | - | SOCS3 | 17 | - |
| intron-exon | LOC101928816 | 2 | - | SP100 | 2 | - |
| exon-exon | LOC101928824 | 22 | + | MED15 | 22 | + |
| intron-exon | LOC101928844 | 19 | - | FUT3 | 19 | - |
| intron-exon | LOC101928844 | 19 | - | FUT3 | 19 | - |
| intron-exon | LOC101928844 | 19 | - | FUT3 | 19 | - |
| intron-exon | LOC101928844 | 19 | - | FUT3 | 19 | - |
| intron-exon | LOC101928844 | 19 | - | FUT3 | 19 | - |
| intron-exon | LOC101928844 | 19 | - | FUT3 | 19 | - |
| intron-exon | LOC101928844 | 19 | - | FUT3 | 19 | - |
| exon-intron | LOC101928847 | 11 | + | NCAM1 | 11 | + |
| intron-exon | LOC101928847 | 11 | + | NCAM1 | 11 | + |
| exon-exon | LOC101928847 | 11 | + | NCAM1 | 11 | + |
| exon-exon | LOC101928847 | 11 | + | NCAM1 | 11 | + |
| exon-exon | LOC101928847 | 11 | + | NCAM1 | 11 | + |
| exon-exon | LOC101928847 | 11 | + | NCAM1 | 11 | + |
| intron-exon | LOC101928861 | 7 | - | EXOC4 | 7 | - |
| intron-exon | LOC101928881 | 2 | - | NGEF | 2 | - |
| intron-exon | LOC101928882 | 3 | - | CCDC39 | 3 | - |
| exon-exon | LOC101928882 | 3 | - | CCDC39 | 3 | - |
| exon-intron | LOC101928963 | 4 | - | HNRNPD | 4 | - |
| exon-exon | LOC101928982 | 19 | + | ZFP28 | 19 | + |
| intron-exon | LOC101929028 | 8 | - | MSR1 | 8 | - |
| intron-exon | LOC101929028 | 8 | - | MSR1 | 8 | - |
| intron-exon | LOC101929028 | 8 | - | MSR1 | 8 | - |
| intron-exon | LOC101929028 | 8 | - | MSR1 | 8 | - |
| intron-exon | LOC101929057 | 6 | + | MDN1 | 6 | - |
| intron-exon | LOC101929057 | 6 | - | LYRM2 | 6 | - |
| exon-exon | LOC101929066 | 8 | - | ASAH1 | 8 | - |
| intron-exon | LOC101929089 | 11 | - | KMT2A | 11 | - |
| exon-exon | LOC101929106 | 3 | + | RTP1 | 3 | + |
| exon-exon | LOC101929140 | 13 | - | KBTBD6 | 13 | - |
| exon-exon | LOC101929141 | 17 | + | PRPSAP2 | 17 | + |
| exon-exon | LOC101929185 | 17 | + | SRSF1 | 17 | + |
| exon-exon | LOC101929243 | 6 | - | ILRUN | 6 | - |
| intron-exon | LOC101929243 | 6 | - | ILRUN | 6 | - |
| intron-exon | LOC101929243 | 6 | - | ILRUN | 6 | - |
| intron-exon | LOC101929243 | 6 | - | ILRUN | 6 | - |
| exon-exon | LOC101929243 | 6 | - | ILRUN | 6 | - |
| intron-exon | LOC101929243 | 6 | - | ILRUN | 6 | - |
| intron-exon | LOC101929243 | 6 | - | ILRUN | 6 | - |
| intron-exon | LOC101929243 | 6 | - | ILRUN | 6 | - |
| exon-exon | LOC101929243 | 6 | - | ILRUN | 6 | - |
| exon-exon | LOC101929243 | 6 | - | ILRUN | 6 | - |
| intron-exon | LOC101929270 | 9 | - | GLE1 | 9 | - |
| intron-exon | LOC101929270 | 9 | - | GLE1 | 9 | - |
| exon-exon | LOC101929285 | 6 | + | ZNF76 | 6 | + |
| intron-exon | LOC101929289 | 11 | - | HSPA8 | 11 | - |
| intron-exon | LOC101929289 | 11 | - | HSPA8 | 11 | - |
| intron-exon | LOC101929289 | 11 | - | HSPA8 | 11 | - |
| intron-exon | LOC101929289 | 11 | - | HSPA8 | 11 | - |
| intron-exon | LOC101929289 | 11 | - | HSPA8 | 11 | - |
| exon-exon | LOC101929289 | 11 | - | HSPA8 | 11 | - |
| intron-exon | LOC101929294 | 8 | + | ADAM7 | 8 | + |
| exon-intron | LOC101929298 | 3 | + | CRYBG3 | 3 | + |
| intron-exon | LOC101929298 | 3 | - | ARL6 | 3 | - |
| intron-exon | LOC101929314 | 9 | - | NUP188 | 9 | - |
| intron-exon | LOC101929314 | 9 | - | NUP188 | 9 | - |
| intron-exon | LOC101929314 | 9 | - | NUP188 | 9 | - |
| intron-exon | LOC101929314 | 9 | - | NUP188 | 9 | - |
| intron-exon | LOC101929314 | 9 | - | NUP188 | 9 | - |
| intron-exon | LOC101929314 | 9 | - | NUP188 | 9 | - |
| intron-exon | LOC101929340 | 11 | - | ESAM | 11 | - |
| intron-exon | LOC101929340 | 11 | - | ESAM | 11 | - |
| intron-exon | LOC101929340 | 11 | - | ESAM | 11 | - |
| intron-exon | LOC101929340 | 11 | - | ESAM | 11 | - |
| intron-exon | LOC101929340 | 11 | - | ESAM | 11 | - |
| intron-exon | LOC101929340 | 11 | - | ESAM | 11 | - |
| intron-exon | LOC101929340 | 11 | - | ESAM | 11 | - |
| intron-exon | LOC101929340 | 11 | - | ESAM | 11 | - |
| intron-exon | LOC101929340 | 11 | - | ESAM | 11 | - |
| intron-exon | LOC101929340 | 11 | - | ESAM | 11 | - |
| intron-exon | LOC101929340 | 11 | - | ESAM | 11 | - |
| intron-exon | LOC101929340 | 11 | - | ESAM | 11 | - |
| intron-exon | LOC101929340 | 11 | - | ESAM | 11 | - |
| intron-exon | LOC101929340 | 11 | - | ESAM | 11 | - |
| intron-exon | LOC101929353 | 4 | - | DDIT4L | 4 | - |
| intron-exon | LOC101929353 | 4 | - | DDIT4L | 4 | - |
| intron-exon | LOC101929353 | 4 | - | DDIT4L | 4 | - |
| intron-exon | LOC101929353 | 4 | - | DDIT4L | 4 | - |
| intron-exon | LOC101929353 | 4 | - | DDIT4L | 4 | - |
| exon-exon | LOC101929415 | 8 | - | PENK | 8 | - |
| exon-exon | LOC101929415 | 8 | - | PENK | 8 | - |
| exon-exon | LOC101929415 | 8 | - | PENK | 8 | - |
| exon-exon | LOC101929415 | 8 | - | PENK | 8 | - |
| exon-exon | LOC101929415 | 8 | - | PENK | 8 | - |
| exon-exon | LOC101929415 | 8 | - | PENK | 8 | - |
| exon-exon | LOC101929415 | 8 | - | PENK | 8 | - |
| exon-exon | LOC101929415 | 8 | - | PENK | 8 | - |
| exon-exon | LOC101929415 | 8 | - | PENK | 8 | - |
| exon-exon | LOC101929415 | 8 | - | PENK | 8 | - |
| exon-exon | LOC101929415 | 8 | - | PENK | 8 | - |
| exon-exon | LOC101929415 | 8 | - | PENK | 8 | - |
| exon-exon | LOC101929415 | 8 | - | PENK | 8 | - |
| exon-exon | LOC101929415 | 8 | - | PENK | 8 | - |
| exon-exon | LOC101929415 | 8 | - | PENK | 8 | - |
| exon-exon | LOC101929415 | 8 | - | PENK | 8 | - |
| exon-exon | LOC101929415 | 8 | - | PENK | 8 | - |
| exon-exon | LOC101929415 | 8 | - | PENK | 8 | - |
| intron-exon | LOC101929415 | 8 | - | PENK | 8 | - |
| intron-exon | LOC101929415 | 8 | - | PENK | 8 | - |
| intron-exon | LOC101929415 | 8 | - | PENK | 8 | - |
| intron-exon | LOC101929415 | 8 | - | PENK | 8 | - |
| intron-exon | LOC101929415 | 8 | - | PENK | 8 | - |
| intron-exon | LOC101929415 | 8 | - | PENK | 8 | - |
| intron-exon | LOC101929415 | 8 | - | PENK | 8 | - |
| intron-exon | LOC101929415 | 8 | - | PENK | 8 | - |
| intron-exon | LOC101929415 | 8 | - | PENK | 8 | - |
| exon-intron | LOC101929480 | 16 | - | MAPK8IP3 | 16 | - |
| exon-intron | LOC101929485 | 3 | - | AC079382.2 | 3 | - |
| exon-intron | LOC101929494 | 17 | - | ARHGAP23 | 17 | - |
| exon-exon | LOC101929540 | 10 | + | LINC00999 | 10 | + |
| intron-exon | LOC101929633 | 2 | - | COBLL1 | 2 | - |
| intron-exon | LOC101929633 | 2 | - | COBLL1 | 2 | - |
| intron-exon | LOC101929633 | 2 | - | COBLL1 | 2 | - |
| exon-exon | LOC101929657 | 13 | - | NEK5 | 13 | - |
| exon-exon | LOC101929657 | 13 | - | NEK5 | 13 | - |
| exon-exon | LOC101929704 | 5 | + | TTC23L | 5 | + |
| exon-exon | LOC101929718 | 14 | - | METTL17 | 14 | - |
| intron-exon | LOC101929718 | 14 | - | METTL17 | 14 | - |
| intron-exon | LOC101929718 | 14 | - | METTL17 | 14 | - |
| exon-exon | LOC101929718 | 14 | - | METTL17 | 14 | - |
| exon-exon | LOC101929718 | 14 | - | METTL17 | 14 | - |
| exon-exon | LOC101929718 | 14 | - | METTL17 | 14 | - |
| exon-exon | LOC101929718 | 14 | - | METTL17 | 14 | - |
| exon-exon | LOC101929718 | 14 | - | METTL17 | 14 | - |
| exon-exon | LOC101929718 | 14 | - | METTL17 | 14 | - |
| exon-exon | LOC101929718 | 14 | - | METTL17 | 14 | - |
| exon-exon | LOC101929718 | 14 | - | METTL17 | 14 | - |
| exon-exon | LOC101929718 | 14 | - | METTL17 | 14 | - |
| exon-exon | LOC101929718 | 14 | - | METTL17 | 14 | - |
| exon-exon | LOC101929718 | 14 | - | METTL17 | 14 | - |
| exon-exon | LOC101929718 | 14 | - | METTL17 | 14 | - |
| exon-exon | LOC101929718 | 14 | - | METTL17 | 14 | - |
| exon-exon | LOC101929718 | 14 | - | METTL17 | 14 | - |
| exon-exon | LOC101929718 | 14 | - | METTL17 | 14 | - |
| exon-exon | LOC101929718 | 14 | - | METTL17 | 14 | - |
| exon-exon | LOC101929718 | 14 | - | METTL17 | 14 | - |
| exon-exon | LOC101929718 | 14 | - | METTL17 | 14 | - |
| exon-exon | LOC101929718 | 14 | - | METTL17 | 14 | - |
| exon-intron | LOC101929718 | 14 | - | METTL17 | 14 | - |
| exon-exon | LOC101929767 | 17 | - | BRCA1 | 17 | - |
| exon-intron | LOC101929777 | 17 | - | LRRC37A2 | 17 | - |
| exon-exon | LOC101929823 | 17 | - | LOC105377826 | 17 | - |
| intron-exon | LOC101929882 | 2 | + | KLF11 | 2 | + |
| exon-intron | LOC101929918 | 11 | - | ZSCAN4 | 19 | - |
| exon-exon | LOC101929935 | 1 | - | PLPP3 | 1 | - |
| intron-exon | LOC101929937 | 20 | + | NRSN2 | 20 | + |
| exon-intron | LOC101929959 | 9 | + | LOC102724580 | 9 | + |
| intron-exon | LOC101930026 | 9 | - | LOC107987007 | 9 | - |
| exon-exon | LOC101930048 | 9 | - | LOC101930053 | 9 | - |
| exon-intron | LOC101930100 | 21 | + | CR381670.1 | 21 | - |
| exon-intron | LOC101930100 | 21 | + | CR381670.1 | 21 | - |
| intron-exon | LOC101930100 | 21 | + | LOC101927345 | 21 | + |
| exon-exon | LOC101930112 | 16 | + | SPG7 | 16 | + |
| intron-exon | LOC102546294 | 5 | + | SPINK9 | 5 | + |
| exon-intron | LOC102546299 | 5 | - | LOC105377703 | 5 | - |
| exon-exon | LOC102546299 | 5 | - | LOC105377703 | 5 | - |
| exon-exon | LOC102546299 | 5 | - | LOC105377703 | 5 | - |
| exon-exon | LOC102546299 | 5 | - | LOC105377703 | 5 | - |
| exon-exon | LOC102546299 | 5 | - | LOC105377703 | 5 | - |
| exon-exon | LOC102546299 | 5 | - | LOC105377703 | 5 | - |
| exon-exon | LOC102546299 | 5 | - | LOC105377703 | 5 | - |
| exon-exon | LOC102546299 | 5 | - | LOC105377703 | 5 | - |
| exon-exon | LOC102546299 | 5 | - | LOC105377703 | 5 | - |
| exon-exon | LOC102546299 | 5 | - | LOC105377703 | 5 | - |
| intron-exon | LOC102606465 | 1 | - | LOC102606465 | 1 | + |
| intron-exon | LOC102723313 | 8 | - | SOX7 | 8 | - |
| intron-exon | LOC102723313 | 8 | - | SOX7 | 8 | - |
| intron-exon | LOC102723313 | 8 | - | SOX7 | 8 | - |
| intron-exon | LOC102723313 | 8 | - | SOX7 | 8 | - |
| intron-exon | LOC102723313 | 8 | - | SOX7 | 8 | - |
| intron-exon | LOC102723313 | 8 | - | SOX7 | 8 | - |
| intron-exon | LOC102723313 | 8 | - | SOX7 | 8 | - |
| intron-exon | LOC102723313 | 8 | - | SOX7 | 8 | - |
| intron-exon | LOC102723313 | 8 | - | SOX7 | 8 | - |
| intron-exon | LOC102723313 | 8 | - | SOX7 | 8 | - |
| intron-exon | LOC102723313 | 8 | - | SOX7 | 8 | - |
| intron-exon | LOC102723313 | 8 | - | SOX7 | 8 | - |
| intron-exon | LOC102723313 | 8 | - | SOX7 | 8 | - |
| intron-exon | LOC102723313 | 8 | - | SOX7 | 8 | - |
| intron-exon | LOC102723313 | 8 | - | SOX7 | 8 | - |
| intron-exon | LOC102723313 | 8 | - | SOX7 | 8 | - |
| intron-exon | LOC102723313 | 8 | - | SOX7 | 8 | - |
| intron-exon | LOC102723313 | 8 | - | SOX7 | 8 | - |
| intron-exon | LOC102723313 | 8 | - | SOX7 | 8 | - |
| intron-exon | LOC102723313 | 8 | - | SOX7 | 8 | - |
| intron-exon | LOC102723313 | 8 | - | SOX7 | 8 | - |
| intron-exon | LOC102723313 | 8 | - | SOX7 | 8 | - |
| intron-exon | LOC102723313 | 8 | - | SOX7 | 8 | - |
| intron-exon | LOC102723430 | 3 | - | LINC02044 | 3 | - |
| intron-exon | LOC102723436 | 1 | - | CDC7 | 1 | - |
| intron-exon | LOC102723436 | 1 | - | CDC7 | 1 | - |
| exon-intron | LOC102723444 | 5 | - | TNFAIP8 | 5 | - |
| intron-exon | LOC102723490 | 13 | + | SERTM1 | 13 | + |
| exon-exon | LOC102723493 | 15 | + | SMAD3 | 15 | + |
| exon-intron | LOC102723517 | 17 | + | LINC02097 | 17 | + |
| exon-exon | LOC102723517 | 17 | + | LINC02097 | 17 | + |
| intron-exon | LOC102723533 | 7 | - | LOC107986794 | 7 | - |
| intron-exon | LOC102723543 | 1 | - | ATP2B4 | 1 | - |
| exon-intron | LOC102723548 | 15 | - | PAQR5 | 15 | - |
| exon-intron | LOC102723672 | 7 | - | AC093627.5 | 7 | - |
| intron-exon | LOC102723729 | 8 | + | GPAT4 | 8 | + |
| exon-intron | LOC102723729 | 8 | - | GINS4 | 8 | - |
| intron-exon | LOC102723733 | 4 | - | SEL1L3 | 4 | - |
| intron-exon | LOC102723752 | 5 | - | OXCT1 | 5 | - |
| intron-exon | LOC102723752 | 5 | - | OXCT1 | 5 | - |
| intron-exon | LOC102723752 | 5 | - | OXCT1 | 5 | - |
| intron-exon | LOC102723752 | 5 | - | OXCT1 | 5 | - |
| intron-exon | LOC102723752 | 5 | - | OXCT1 | 5 | - |
| intron-exon | LOC102723752 | 5 | - | OXCT1 | 5 | - |
| intron-exon | LOC102723752 | 5 | - | OXCT1 | 5 | - |
| intron-exon | LOC102723752 | 5 | - | OXCT1 | 5 | - |
| intron-exon | LOC102723752 | 5 | - | OXCT1 | 5 | - |
| intron-exon | LOC102723752 | 5 | - | OXCT1 | 5 | - |
| intron-exon | LOC102723752 | 5 | - | OXCT1 | 5 | - |
| intron-exon | LOC102723752 | 5 | - | OXCT1 | 5 | - |
| intron-exon | LOC102723752 | 5 | - | OXCT1 | 5 | - |
| intron-exon | LOC102723752 | 5 | - | OXCT1 | 5 | - |
| intron-exon | LOC102723752 | 5 | - | OXCT1 | 5 | - |
| intron-exon | LOC102723752 | 5 | - | OXCT1 | 5 | - |
| intron-exon | LOC102723759 | 3 | + | SEC61A1 | 3 | + |
| intron-exon | LOC102723765 | 11 | + | SCGB1A1 | 11 | + |
| exon-intron | LOC102723777 | 17 | + | LOC105379279 | 17 | + |
| intron-exon | LOC102723803 | 9 | + | ND4 | MT | - |
| intron-exon | LOC102723838 | 11 | - | TMEM123 | 11 | - |
| intron-exon | LOC102723838 | 11 | - | TMEM123 | 11 | - |
| exon-intron | LOC102723899 | 7 | + | CDK14 | 7 | + |
| exon-exon | LOC102723899 | 7 | - | CLDN12 | 7 | - |
| exon-intron | LOC102723899 | 7 | - | LOC112267985 | 7 | - |
| intron-exon | LOC102723945 | 16 | + | DECR2 | 16 | + |
| intron-exon | LOC102723945 | 16 | + | PIGQ | 16 | + |
| intron-exon | LOC102723945 | 16 | + | PIGQ | 16 | + |
| intron-exon | LOC102723945 | 16 | + | PIGQ | 16 | + |
| intron-exon | LOC102723945 | 16 | + | PIGQ | 16 | + |
| intron-exon | LOC102723945 | 16 | + | WFIKKN1 | 16 | + |
| intron-exon | LOC102723945 | 16 | + | MCRIP2 | 16 | + |
| exon-exon | LOC102723966 | 11 | - | LINC02550 | 11 | - |
| exon-exon | LOC102723968 | 13 | + | OR7E101P | 13 | + |
| exon-exon | LOC102723994 | 9 | - | LOC105375970 | 9 | - |
| intron-exon | LOC102724020 | 12 | - | CLEC12B | 12 | - |
| exon-intron | LOC102724055 | 15 | + | LOC105370754 | 15 | - |
| exon-exon | LOC102724055 | 15 | + | LOC105370751 | 15 | + |
| exon-exon | LOC102724057 | 9 | + | LOC389765 | 9 | + |
| exon-exon | LOC102724064 | 11 | + | SLC29A2 | 11 | + |
| exon-intron | LOC102724200 | 21 | - | LOC101929727 | 10 | + |
| intron-exon | LOC102724250 | 1 | - | RAPGEFL1 | 17 | + |
| exon-exon | LOC102724261 | 12 | - | LDHB | 12 | - |
| exon-exon | LOC102724289 | 3 | + | LANCL1 | 2 | - |
| intron-exon | LOC102724322 | 9 | + | CAMK2G | 10 | + |
| intron-exon | LOC102724323 | 10 | - | ALOX5 | 10 | - |
| intron-exon | LOC102724404 | 5 | + | ADAM19 | 5 | + |
| intron-exon | LOC102724404 | 5 | - | CYFIP2 | 5 | - |
| intron-exon | LOC102724404 | 5 | - | CYFIP2 | 5 | - |
| intron-exon | LOC102724446 | 1 | + | OR2G3 | 1 | + |
| exon-intron | LOC102724528 | 1 | - | DNM3 | 1 | - |
| intron-exon | LOC102724528 | 1 | - | DNM3 | 1 | - |
| intron-exon | LOC102724530 | 5 | - | JMY | 5 | - |
| exon-intron | LOC102724591 | 6 | - | CAP2 | 6 | - |
| exon-exon | LOC102724680 | 12 | - | SLC6A15 | 12 | - |
| exon-intron | LOC102724684 | 9 | - | GALNT12 | 9 | - |
| intron-exon | LOC102724701 | 21 | - | IGFBP4 | 17 | - |
| intron-exon | LOC102724772 | 8 | - | EYA1 | 8 | - |
| exon-exon | LOC102724775 | 11 | - | ME3-DT | 11 | - |
| exon-exon | LOC102724776 | 4 | + | MAP9 | 4 | + |
| exon-intron | LOC102724801 | 22 | + | LINC02559 | 22 | + |
| intron-exon | LOC102724813 | 9 | + | DDX11L5 | 9 | + |
| exon-exon | LOC102724843 | 21 | + | LOC107987309 | 21 | + |
| intron-exon | LOC102724881 | 8 | - | SH2D4A | 8 | - |
| exon-intron | LOC102724889 | 6 | + | ZNF165 | 6 | + |
| exon-exon | LOC102724916 | 4 | - | MRPL1 | 4 | - |
| intron-exon | LOC102725021 | 15 | + | GOLGA8H | 15 | + |
| intron-exon | LOC102725044 | 14 | - | RABGGTA | 14 | - |
| intron-exon | LOC102725180 | 19 | - | SBNO2 | 19 | - |
| intron-exon | LOC102725180 | 19 | - | SBNO2 | 19 | - |
| intron-exon | LOC102725180 | 19 | - | SBNO2 | 19 | - |
| intron-exon | LOC102725180 | 19 | - | SBNO2 | 19 | - |
| intron-exon | LOC102725180 | 19 | - | SBNO2 | 19 | - |
| exon-exon | LOC102725238 | 17 | - | CAVIN1 | 17 | - |
| exon-exon | LOC102725238 | 17 | - | CAVIN1 | 17 | - |
| exon-exon | LOC103611081 | 11 | + | SNX19 | 11 | + |
| exon-intron | LOC103908604 | 9 | + | CNTNAP3P5 | 9 | + |
| exon-intron | LOC103908605 | 9 | - | CNTNAP3P8 | 9 | - |
| exon-exon | LOC104968399 | 18 | + | MYL12B | 18 | + |
| intron-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| exon-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| intron-exon | LOC104968399 | 18 | - | MYL12B | 18 | - |
| exon-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| exon-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| intron-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| intron-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| exon-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| exon-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| intron-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| intron-exon | LOC104968399 | 18 | - | MYL12B | 18 | - |
| intron-exon | LOC104968399 | 18 | - | MYL12B | 18 | - |
| intron-exon | LOC104968399 | 18 | - | MYL12B | 18 | - |
| exon-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| exon-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| exon-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| exon-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| exon-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| intron-exon | LOC104968399 | 18 | - | MYL12B | 18 | - |
| exon-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| exon-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| exon-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| intron-exon | LOC104968399 | 18 | - | MYL12B | 18 | - |
| exon-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| exon-exon | LOC104968399 | 18 | - | MYL12B | 18 | - |
| exon-exon | LOC104968399 | 18 | - | MYL12B | 18 | - |
| exon-exon | LOC104968399 | 18 | - | MYL12B | 18 | - |
| exon-exon | LOC104968399 | 18 | - | MYL12B | 18 | - |
| exon-exon | LOC104968399 | 18 | - | MYL12B | 18 | - |
| exon-exon | LOC104968399 | 18 | - | MYL12B | 18 | - |
| exon-exon | LOC104968399 | 18 | - | MYL12B | 18 | - |
| intron-exon | LOC104968399 | 18 | - | MYL12B | 18 | - |
| exon-exon | LOC104968399 | 18 | - | MYL12B | 18 | - |
| exon-exon | LOC104968399 | 18 | - | MYL12B | 18 | - |
| exon-exon | LOC104968399 | 18 | - | MYL12B | 18 | - |
| exon-exon | LOC104968399 | 18 | - | MYL12B | 18 | - |
| intron-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| exon-exon | LOC104968399 | 18 | - | MYL12B | 18 | - |
| intron-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| intron-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| intron-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| intron-exon | LOC104968399 | 18 | - | MYL12B | 18 | - |
| intron-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| exon-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| exon-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| intron-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| exon-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| intron-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| intron-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| exon-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| intron-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| intron-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| exon-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| intron-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| exon-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| exon-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| intron-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| intron-exon | LOC104968399 | 18 | - | MYL12B | 18 | - |
| intron-exon | LOC104968399 | 18 | - | MYL12B | 18 | - |
| intron-exon | LOC104968399 | 18 | - | MYL12B | 18 | - |
| intron-exon | LOC104968399 | 18 | - | MYL12B | 18 | - |
| intron-exon | LOC104968399 | 18 | - | MYL12B | 18 | - |
| intron-exon | LOC104968399 | 18 | - | MYL12B | 18 | - |
| intron-exon | LOC104968399 | 18 | - | MYL12B | 18 | - |
| intron-exon | LOC104968399 | 18 | - | MYL12B | 18 | - |
| intron-exon | LOC104968399 | 18 | - | MYL12B | 18 | - |
| intron-exon | LOC104968399 | 18 | - | MYL12A | 18 | - |
| exon-exon | LOC105369209 | 20 | + | OSBPL2 | 20 | + |
| exon-intron | LOC105369228 | 5 | - | GUSBP13 | 5 | - |
| intron-exon | LOC105369228 | 5 | - | CDH12P1 | 5 | - |
| exon-intron | LOC105369304 | 21 | - | HSPA13 | 21 | - |
| exon-exon | LOC105369304 | 21 | - | HSPA13 | 21 | - |
| exon-exon | LOC105369304 | 21 | - | HSPA13 | 21 | - |
| exon-exon | LOC105369315 | 11 | - | LOC283194 | 11 | - |
| intron-exon | LOC105369321 | 11 | + | LINC00301 | 11 | + |
| intron-exon | LOC105369321 | 11 | + | MS4A8 | 11 | + |
| intron-exon | LOC105369333 | 11 | - | EML3 | 11 | - |
| exon-exon | LOC105369351 | 11 | - | KLC2 | 11 | - |
| intron-exon | LOC105369351 | 11 | - | KLC2 | 11 | - |
| exon-exon | LOC105369351 | 11 | - | KLC2 | 11 | - |
| intron-exon | LOC105369370 | 11 | - | MYEOV | 11 | - |
| exon-intron | LOC105369370 | 11 | - | MYEOV | 11 | - |
| exon-exon | LOC105369388 | 11 | - | SLCO2B1 | 11 | - |
| intron-exon | LOC105369421 | 11 | - | HIKESHI | 11 | - |
| intron-exon | LOC105369421 | 11 | - | HIKESHI | 11 | - |
| intron-exon | LOC105369421 | 11 | - | HIKESHI | 11 | - |
| intron-exon | LOC105369421 | 11 | - | HIKESHI | 11 | - |
| intron-exon | LOC105369421 | 11 | - | HIKESHI | 11 | - |
| intron-exon | LOC105369421 | 11 | - | HIKESHI | 11 | - |
| intron-exon | LOC105369421 | 11 | - | HIKESHI | 11 | - |
| intron-exon | LOC105369421 | 11 | - | HIKESHI | 11 | - |
| intron-exon | LOC105369421 | 11 | - | HIKESHI | 11 | - |
| intron-exon | LOC105369421 | 11 | - | HIKESHI | 11 | - |
| intron-exon | LOC105369421 | 11 | - | HIKESHI | 11 | - |
| intron-exon | LOC105369421 | 11 | - | HIKESHI | 11 | - |
| intron-exon | LOC105369421 | 11 | - | HIKESHI | 11 | - |
| intron-exon | LOC105369421 | 11 | - | HIKESHI | 11 | - |
| intron-exon | LOC105369421 | 11 | - | HIKESHI | 11 | - |
| intron-exon | LOC105369421 | 11 | - | HIKESHI | 11 | - |
| intron-exon | LOC105369421 | 11 | - | HIKESHI | 11 | - |
| intron-exon | LOC105369421 | 11 | - | HIKESHI | 11 | - |
| intron-exon | LOC105369438 | 11 | + | PIWIL4 | 11 | + |
| intron-exon | LOC105369536 | 11 | + | SORL1 | 11 | + |
| intron-exon | LOC105369543 | 11 | - | SCN3B | 11 | - |
| intron-exon | LOC105369543 | 11 | - | SCN3B | 11 | - |
| intron-exon | LOC105369543 | 11 | - | SCN3B | 11 | - |
| intron-exon | LOC105369543 | 11 | - | SCN3B | 11 | - |
| intron-exon | LOC105369632 | 12 | + | LRRC23 | 12 | + |
| intron-exon | LOC105369632 | 12 | + | DSTNP2 | 12 | + |
| intron-exon | LOC105369632 | 12 | - | SPSB2 | 12 | - |
| intron-exon | LOC105369673 | 12 | - | RERG | 12 | - |
| intron-exon | LOC105369690 | 12 | - | CMAS | 12 | - |
| intron-exon | LOC105369690 | 12 | - | CMAS | 12 | - |
| intron-exon | LOC105369690 | 12 | - | CMAS | 12 | - |
| intron-exon | LOC105369690 | 12 | - | CMAS | 12 | - |
| intron-exon | LOC105369690 | 12 | - | CMAS | 12 | - |
| intron-exon | LOC105369690 | 12 | - | CMAS | 12 | - |
| intron-exon | LOC105369705 | 12 | - | SSPN | 12 | - |
| intron-exon | LOC105369705 | 12 | - | SSPN | 12 | - |
| intron-exon | LOC105369705 | 12 | - | SSPN | 12 | - |
| intron-exon | LOC105369711 | 12 | + | OR2A12 | 7 | + |
| intron-exon | LOC105369736 | 12 | - | LRRK2 | 12 | - |
| intron-exon | LOC105369736 | 12 | - | LRRK2 | 12 | - |
| exon-intron | LOC105369748 | 12 | + | RAPGEF3 | 12 | + |
| exon-exon | LOC105369755 | 12 | - | DDX23 | 12 | - |
| exon-exon | LOC105369755 | 12 | - | DDX23 | 12 | - |
| exon-exon | LOC105369755 | 12 | - | DDX23 | 12 | - |
| exon-exon | LOC105369755 | 12 | - | DDX23 | 12 | - |
| exon-exon | LOC105369755 | 12 | - | DDX23 | 12 | - |
| exon-exon | LOC105369755 | 12 | - | DDX23 | 12 | - |
| exon-exon | LOC105369755 | 12 | - | DDX23 | 12 | - |
| exon-exon | LOC105369755 | 12 | - | DDX23 | 12 | - |
| exon-exon | LOC105369755 | 12 | - | DDX23 | 12 | - |
| exon-exon | LOC105369755 | 12 | - | DDX23 | 12 | - |
| exon-intron | LOC105369755 | 12 | - | DDX23 | 12 | - |
| exon-exon | LOC105369755 | 12 | - | DDX23 | 12 | - |
| exon-exon | LOC105369755 | 12 | - | DDX23 | 12 | - |
| exon-exon | LOC105369755 | 12 | - | DDX23 | 12 | - |
| exon-exon | LOC105369755 | 12 | - | DDX23 | 12 | - |
| exon-exon | LOC105369755 | 12 | - | DDX23 | 12 | - |
| exon-exon | LOC105369755 | 12 | - | DDX23 | 12 | - |
| exon-exon | LOC105369755 | 12 | - | DDX23 | 12 | - |
| exon-intron | LOC105369760 | 12 | - | TUBA1B | 12 | - |
| exon-intron | LOC105369760 | 12 | - | TUBA1B | 12 | - |
| exon-intron | LOC105369760 | 12 | - | TUBA1B | 12 | - |
| intron-exon | LOC105369764 | 12 | + | AQP6 | 12 | + |
| intron-exon | LOC105369764 | 12 | + | AQP6 | 12 | + |
| intron-exon | LOC105369774 | 12 | - | CALCOCO1 | 12 | - |
| intron-exon | LOC105369774 | 12 | - | CALCOCO1 | 12 | - |
| intron-exon | LOC105369774 | 12 | - | CALCOCO1 | 12 | - |
| exon-exon | LOC105369774 | 12 | - | CALCOCO1 | 12 | - |
| exon-exon | LOC105369774 | 12 | - | CALCOCO1 | 12 | - |
| exon-exon | LOC105369779 | 12 | - | CD63 | 12 | - |
| intron-exon | LOC105369780 | 12 | + | RPS26P25 | 4 | - |
| intron-exon | LOC105369781 | 12 | - | IKZF4 | 12 | - |
| exon-exon | LOC105369782 | 12 | - | ERBB3 | 12 | - |
| exon-exon | LOC105369782 | 12 | - | ERBB3 | 12 | - |
| exon-exon | LOC105369782 | 12 | - | ERBB3 | 12 | - |
| exon-exon | LOC105369782 | 12 | - | ENTPD7 | 10 | + |
| exon-exon | LOC105369782 | 12 | - | ERBB3 | 12 | - |
| exon-intron | LOC105369795 | 12 | + | FARSB | 2 | + |
| exon-intron | LOC105369839 | 12 | + | LINC02445 | 12 | + |
| exon-intron | LOC105369869 | 12 | + | ACSS3 | 12 | + |
| exon-exon | LOC105369869 | 12 | - | LIN7A | 12 | - |
| exon-exon | LOC105369957 | 12 | + | MUC4 | 3 | - |
| exon-exon | LOC105369968 | 12 | + | CORO1C | 12 | + |
| intron-exon | LOC105369968 | 12 | - | SELPLG | 12 | - |
| intron-exon | LOC105369968 | 12 | - | SELPLG | 12 | - |
| intron-exon | LOC105369968 | 12 | - | SELPLG | 12 | - |
| intron-exon | LOC105369968 | 12 | - | SELPLG | 12 | - |
| intron-exon | LOC105369968 | 12 | - | SELPLG | 12 | - |
| intron-exon | LOC105369968 | 12 | - | SELPLG | 12 | - |
| intron-exon | LOC105369968 | 12 | - | SELPLG | 12 | - |
| intron-exon | LOC105369968 | 12 | - | SELPLG | 12 | - |
| intron-exon | LOC105369968 | 12 | - | SELPLG | 12 | - |
| exon-exon | LOC105369989 | 12 | - | SLC8B1 | 12 | - |
| exon-intron | LOC105370000 | 12 | + | LOC107984437 | 12 | + |
| intron-exon | LOC105370000 | 12 | - | TBX3 | 12 | - |
| intron-exon | LOC105370027 | 12 | - | CCDC60 | 12 | - |
| intron-exon | LOC105370027 | 12 | - | CCDC60 | 12 | - |
| intron-exon | LOC105370027 | 12 | - | CCDC60 | 12 | - |
| intron-exon | LOC105370031 | 12 | - | GATC | 12 | - |
| intron-exon | LOC105370041 | 12 | - | DDX55 | 12 | - |
| intron-exon | LOC105370041 | 12 | - | DDX55 | 12 | - |
| intron-exon | LOC105370042 | 12 | - | ATP6V0A2 | 12 | - |
| intron-exon | LOC105370042 | 12 | - | ATP6V0A2 | 12 | - |
| intron-exon | LOC105370042 | 12 | - | ATP6V0A2 | 12 | - |
| exon-intron | LOC105370042 | 12 | - | ATP6V0A2 | 12 | - |
| exon-intron | LOC105370042 | 12 | - | ATP6V0A2 | 12 | - |
| intron-exon | LOC105370050 | 12 | - | SCARB1 | 12 | - |
| intron-exon | LOC105370052 | 12 | + | AACS | 12 | + |
| intron-exon | LOC105370062 | 12 | - | OLFM1 | 9 | + |
| intron-exon | LOC105370062 | 12 | - | RNA45SN2 | 21 | - |
| intron-exon | LOC105370062 | 12 | - | RNA45SN2 | 21 | - |
| intron-exon | LOC105370062 | 12 | - | RNA45SN2 | 21 | - |
| exon-exon | LOC105370103 | 13 | + | IFT88 | 13 | + |
| exon-exon | LOC105370191 | 13 | - | ARL6 | 3 | - |
| exon-exon | LOC105370192 | 13 | - | LCP1 | 13 | - |
| exon-exon | LOC105370192 | 13 | - | LCP1 | 13 | - |
| exon-exon | LOC105370192 | 13 | - | LCP1 | 13 | - |
| exon-exon | LOC105370192 | 13 | - | LCP1 | 13 | - |
| exon-exon | LOC105370192 | 13 | - | LCP1 | 13 | - |
| exon-exon | LOC105370192 | 13 | - | LCP1 | 13 | - |
| exon-intron | LOC105370234 | 13 | + | CNTNAP2 | 7 | - |
| intron-exon | LOC105370335 | 13 | - | PCCA | 13 | - |
| intron-exon | LOC105370372 | 13 | - | SPACA7 | 13 | - |
| intron-exon | LOC105370384 | 13 | - | CDC16 | 13 | - |
| intron-exon | LOC105370384 | 13 | - | CDC16 | 13 | - |
| exon-intron | LOC105370399 | 14 | - | LINC02332 | 14 | - |
| exon-intron | LOC105370404 | 14 | - | OR6E1P | 14 | - |
| exon-exon | LOC105370438 | 14 | + | NUBPL | 14 | + |
| intron-exon | LOC105370449 | 14 | - | VIM | 10 | + |
| intron-exon | LOC105370502 | 14 | + | COX3 | MT | - |
| intron-exon | LOC105370515 | 14 | - | TMEM260 | 14 | - |
| exon-exon | LOC105370531 | 14 | + | LOC105370530 | 14 | + |
| intron-exon | LOC105370531 | 14 | + | RHOJ | 14 | + |
| exon-intron | LOC105370547 | 14 | - | RAD51B | 14 | - |
| intron-exon | LOC105370550 | 14 | + | GALNT16 | 14 | + |
| intron-exon | LOC105370563 | 14 | - | LIN52 | 14 | - |
| intron-exon | LOC105370563 | 14 | - | LIN52 | 14 | - |
| intron-exon | LOC105370575 | 14 | - | GPATCH2L | 14 | - |
| intron-exon | LOC105370650 | 14 | - | LINC02291 | 14 | - |
| exon-exon | LOC105370687 | 14 | + | EIF5 | 14 | + |
| exon-exon | LOC105370687 | 14 | + | EIF5 | 14 | + |
| exon-exon | LOC105370689 | 14 | - | LOC105370690 | 14 | - |
| exon-exon | LOC105370705 | 14 | - | CDH24 | 14 | - |
| exon-intron | LOC105370787 | 15 | + | LOC102724219 | 21 | + |
| intron-exon | LOC105370790 | 15 | - | RTF1 | 15 | - |
| intron-exon | LOC105370790 | 15 | - | RTF1 | 15 | - |
| intron-exon | LOC105370790 | 15 | - | RTF1 | 15 | - |
| intron-exon | LOC105370790 | 15 | - | RTF1 | 15 | - |
| intron-exon | LOC105370790 | 15 | - | RTF1 | 15 | - |
| exon-intron | LOC105370852 | 15 | + | GOLGA2P11 | 15 | + |
| intron-exon | LOC105370861 | 15 | - | TRIP4 | 15 | - |
| intron-exon | LOC105370861 | 15 | - | TRIP4 | 15 | - |
| intron-exon | LOC105370861 | 15 | - | TRIP4 | 15 | - |
| intron-exon | LOC105370861 | 15 | - | TRIP4 | 15 | - |
| intron-exon | LOC105370861 | 15 | - | TRIP4 | 15 | - |
| intron-exon | LOC105370861 | 15 | - | TRIP4 | 15 | - |
| intron-exon | LOC105370861 | 15 | - | TRIP4 | 15 | - |
| intron-exon | LOC105370861 | 15 | - | TRIP4 | 15 | - |
| intron-exon | LOC105370861 | 15 | - | TRIP4 | 15 | - |
| intron-exon | LOC105370861 | 15 | - | TRIP4 | 15 | - |
| intron-exon | LOC105370861 | 15 | - | TRIP4 | 15 | - |
| intron-exon | LOC105370861 | 15 | - | TRIP4 | 15 | - |
| intron-exon | LOC105370861 | 15 | - | TRIP4 | 15 | - |
| intron-exon | LOC105370861 | 15 | - | TRIP4 | 15 | - |
| intron-exon | LOC105370861 | 15 | - | TRIP4 | 15 | - |
| intron-exon | LOC105370861 | 15 | - | TRIP4 | 15 | - |
| intron-exon | LOC105370861 | 15 | - | TRIP4 | 15 | - |
| intron-exon | LOC105370861 | 15 | - | TRIP4 | 15 | - |
| intron-exon | LOC105370861 | 15 | - | TRIP4 | 15 | - |
| intron-exon | LOC105370861 | 15 | - | TRIP4 | 15 | - |
| intron-exon | LOC105370861 | 15 | - | TRIP4 | 15 | - |
| exon-exon | LOC105370866 | 15 | + | RAB11A | 15 | + |
| exon-exon | LOC105370884 | 15 | - | THSD4 | 15 | - |
| intron-exon | LOC105370902 | 15 | + | TOR1AIP2 | 1 | - |
| intron-exon | LOC105370906 | 15 | + | ND2 | MT | - |
| exon-intron | LOC105370911 | 15 | - | AC090607.3 | 15 | - |
| exon-exon | LOC105370913 | 15 | - | LOC112268142 | 15 | - |
| exon-exon | LOC105370974 | 15 | + | SLCO3A1 | 15 | + |
| intron-exon | LOC105371026 | 15 | - | LRRK1 | 15 | - |
| exon-exon | LOC105371036 | 16 | - | PGAP6 | 16 | - |
| exon-exon | LOC105371036 | 16 | - | PGAP6 | 16 | - |
| exon-exon | LOC105371036 | 16 | - | PGAP6 | 16 | - |
| exon-exon | LOC105371036 | 16 | - | PGAP6 | 16 | - |
| intron-exon | LOC105371055 | 16 | - | FLYWCH1 | 16 | - |
| intron-exon | LOC105371055 | 16 | - | FLYWCH1 | 16 | - |
| intron-exon | LOC105371055 | 16 | - | FLYWCH1 | 16 | - |
| intron-exon | LOC105371082 | 16 | + | RPLP0P2 | 11 | + |
| intron-exon | LOC105371114 | 16 | - | SYT17 | 16 | - |
| intron-exon | LOC105371115 | 16 | - | IQCK | 16 | - |
| intron-exon | LOC105371121 | 16 | - | REXO5 | 16 | - |
| intron-exon | LOC105371126 | 16 | + | EEF2K | 16 | + |
| intron-exon | LOC105371129 | 16 | - | MOSMO | 16 | - |
| intron-exon | LOC105371191 | 16 | - | DUSP22 | 6 | + |
| exon-intron | LOC105371206 | 1 | + | BMS1P10 | 9 | - |
| intron-exon | LOC105371251 | 16 | - | CYLD | 16 | - |
| intron-exon | LOC105371251 | 16 | - | CYLD | 16 | - |
| intron-exon | LOC105371251 | 16 | - | CYLD | 16 | - |
| intron-exon | LOC105371335 | 16 | - | ZNF19 | 16 | - |
| exon-exon | LOC105371371 | 16 | + | OSGIN1 | 16 | + |
| intron-exon | LOC105371371 | 16 | - | MLYCD | 16 | - |
| intron-exon | LOC105371371 | 16 | - | MLYCD | 16 | - |
| exon-exon | LOC105371371 | 16 | - | MLYCD | 16 | - |
| intron-exon | LOC105371430 | 17 | + | C17orf97 | 17 | + |
| intron-exon | LOC105371441 | 1 | - | S100A10 | 1 | - |
| intron-exon | LOC105371441 | 1 | - | S100A10 | 1 | - |
| intron-exon | LOC105371441 | 1 | - | S100A10 | 1 | - |
| intron-exon | LOC105371441 | 1 | - | S100A10 | 1 | - |
| exon-exon | LOC105371441 | 1 | - | S100A10 | 1 | - |
| exon-exon | LOC105371441 | 1 | - | S100A10 | 1 | - |
| exon-intron | LOC105371449 | 1 | - | FADS2 | 11 | + |
| intron-exon | LOC105371452 | 1 | + | MSTO1 | 1 | + |
| exon-exon | LOC105371453 | 1 | + | BCAN | 1 | + |
| exon-exon | LOC105371453 | 1 | + | BCAN | 1 | + |
| intron-exon | LOC105371516 | 17 | - | DNAH2 | 17 | - |
| intron-exon | LOC105371516 | 17 | - | DNAH2 | 17 | - |
| intron-exon | LOC105371516 | 17 | - | DNAH2 | 17 | - |
| intron-exon | LOC105371520 | 17 | - | TMEM107 | 17 | - |
| intron-exon | LOC105371520 | 17 | - | TMEM107 | 17 | - |
| exon-exon | LOC105371520 | 17 | - | TMEM107 | 17 | - |
| exon-intron | LOC105371529 | 17 | + | LINC01363 | 1 | - |
| exon-exon | LOC105371553 | 17 | + | KRT16P2 | 17 | + |
| exon-exon | LOC105371566 | 17 | - | DRG2 | 17 | - |
| intron-exon | LOC105371574 | 17 | + | RNA45SN1 | 21 | - |
| intron-exon | LOC105371578 | 17 | - | SLC47A1 | 17 | - |
| exon-exon | LOC105371592 | 17 | - | CLUH | 17 | - |
| intron-exon | LOC105371598 | 1 | - | GPA33 | 1 | - |
| intron-exon | LOC105371598 | 1 | - | GPA33 | 1 | - |
| intron-exon | LOC105371598 | 1 | - | GPA33 | 1 | - |
| intron-exon | LOC105371598 | 1 | - | GPA33 | 1 | - |
| intron-exon | LOC105371598 | 1 | - | GPA33 | 1 | - |
| intron-exon | LOC105371598 | 1 | - | GPA33 | 1 | - |
| intron-exon | LOC105371598 | 1 | - | GPA33 | 1 | - |
| intron-exon | LOC105371598 | 1 | - | GPA33 | 1 | - |
| intron-exon | LOC105371598 | 1 | - | GPA33 | 1 | - |
| intron-exon | LOC105371598 | 1 | - | GPA33 | 1 | - |
| intron-exon | LOC105371598 | 1 | - | GPA33 | 1 | - |
| intron-exon | LOC105371598 | 1 | - | GPA33 | 1 | - |
| exon-intron | LOC105371614 | 1 | + | EEF1AKNMT | 1 | + |
| exon-exon | LOC105371622 | 1 | + | CACYBP | 1 | + |
| exon-exon | LOC105371622 | 1 | - | RABGAP1L | 1 | - |
| exon-exon | LOC105371622 | 1 | - | RABGAP1L | 1 | - |
| intron-exon | LOC105371651 | 1 | - | SWT1 | 1 | - |
| intron-exon | LOC105371651 | 1 | - | SWT1 | 1 | - |
| intron-exon | LOC105371651 | 1 | - | SWT1 | 1 | - |
| intron-exon | LOC105371659 | 1 | + | CAMK2N1 | 1 | - |
| intron-exon | LOC105371659 | 1 | + | CAMK2N1 | 1 | - |
| intron-exon | LOC105371659 | 1 | + | CAMK2N1 | 1 | - |
| intron-exon | LOC105371664 | 1 | + | RGS1 | 1 | + |
| exon-intron | LOC105371716 | 17 | + | PIPOX | 17 | + |
| exon-exon | LOC105371729 | 1 | - | SSR2 | 1 | - |
| exon-intron | LOC105371729 | 1 | - | SSR2 | 1 | - |
| exon-exon | LOC105371729 | 1 | - | SSR2 | 1 | - |
| exon-exon | LOC105371729 | 1 | - | SSR2 | 1 | - |
| exon-exon | LOC105371744 | 17 | + | LOC105371745 | 17 | + |
| exon-exon | LOC105371744 | 17 | + | LOC105371745 | 17 | + |
| exon-exon | LOC105371745 | 17 | - | LOC105371744 | 17 | - |
| exon-exon | LOC105371745 | 17 | - | LOC105371744 | 17 | - |
| intron-exon | LOC105371762 | 17 | - | MLLT6 | 17 | - |
| intron-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| intron-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| intron-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| intron-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| intron-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| intron-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| intron-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| intron-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| intron-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| intron-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| intron-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| intron-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| intron-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| intron-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| intron-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| intron-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| intron-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| intron-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| intron-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| intron-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| intron-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| intron-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| intron-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| intron-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| intron-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| intron-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| intron-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| intron-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| intron-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| intron-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| exon-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| exon-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| exon-intron | LOC105371781 | 17 | - | RAB5C | 17 | - |
| exon-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| exon-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| exon-intron | LOC105371781 | 17 | - | RAB5C | 17 | - |
| exon-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| exon-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| exon-intron | LOC105371781 | 17 | - | RAB5C | 17 | - |
| exon-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| exon-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| exon-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| exon-intron | LOC105371781 | 17 | - | RAB5C | 17 | - |
| exon-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| exon-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| exon-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| exon-intron | LOC105371781 | 17 | - | RAB5C | 17 | - |
| exon-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| exon-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| exon-exon | LOC105371781 | 17 | - | RAB5C | 17 | - |
| intron-exon | LOC105371814 | 17 | + | ATP5MC1 | 17 | + |
| intron-exon | LOC105371843 | 17 | - | RAD51C | 17 | - |
| intron-exon | LOC105371843 | 17 | - | RAD51C | 17 | - |
| intron-exon | LOC105371843 | 17 | - | RAD51C | 17 | - |
| intron-exon | LOC105371843 | 17 | - | RAD51C | 17 | - |
| intron-exon | LOC105371843 | 17 | - | RAD51C | 17 | - |
| intron-exon | LOC105371843 | 17 | - | RAD51C | 17 | - |
| intron-exon | LOC105371843 | 17 | - | RAD51C | 17 | - |
| intron-exon | LOC105371843 | 17 | - | RAD51C | 17 | - |
| intron-exon | LOC105371843 | 17 | - | RAD51C | 17 | - |
| intron-exon | LOC105371843 | 17 | - | RAD51C | 17 | - |
| intron-exon | LOC105371843 | 17 | - | RAD51C | 17 | - |
| intron-exon | LOC105371843 | 17 | - | RAD51C | 17 | - |
| intron-exon | LOC105371843 | 17 | - | RAD51C | 17 | - |
| intron-exon | LOC105371843 | 17 | - | RAD51C | 17 | - |
| intron-exon | LOC105371843 | 17 | - | RAD51C | 17 | - |
| intron-exon | LOC105371843 | 17 | - | RAD51C | 17 | - |
| intron-exon | LOC105371843 | 17 | - | RAD51C | 17 | - |
| intron-exon | LOC105371843 | 17 | - | RAD51C | 17 | - |
| intron-exon | LOC105371843 | 17 | - | RAD51C | 17 | - |
| intron-exon | LOC105371843 | 17 | - | RAD51C | 17 | - |
| intron-exon | LOC105371843 | 17 | - | RAD51C | 17 | - |
| intron-exon | LOC105371843 | 17 | - | RAD51C | 17 | - |
| intron-exon | LOC105371843 | 17 | - | RAD51C | 17 | - |
| intron-exon | LOC105371843 | 17 | - | RAD51C | 17 | - |
| intron-exon | LOC105371843 | 17 | - | RAD51C | 17 | - |
| intron-exon | LOC105371843 | 17 | - | RAD51C | 17 | - |
| intron-exon | LOC105371843 | 17 | - | RAD51C | 17 | - |
| intron-exon | LOC105371843 | 17 | - | RAD51C | 17 | - |
| intron-exon | LOC105371843 | 17 | - | RAD51C | 17 | - |
| exon-exon | LOC105371857 | 17 | - | TANC2 | 17 | - |
| intron-exon | LOC105371864 | 17 | + | CD47 | 3 | - |
| exon-exon | LOC105371871 | 17 | - | LINC00674 | 17 | - |
| exon-exon | LOC105371871 | 17 | - | LINC00674 | 17 | - |
| exon-exon | LOC105371871 | 17 | - | LINC00674 | 17 | - |
| intron-exon | LOC105371891 | 17 | - | DNAI2 | 17 | - |
| intron-exon | LOC105371893 | 17 | - | RAB37 | 17 | - |
| exon-intron | LOC105371912 | 17 | + | AC087645.2 | 17 | + |
| intron-exon | LOC105371939 | 17 | + | ASPSCR1 | 17 | + |
| intron-exon | LOC105371942 | 17 | - | FOXK2 | 17 | - |
| intron-exon | LOC105371954 | 18 | - | LINC00470 | 18 | - |
| exon-intron | LOC105371958 | 18 | - | AP005230.1 | 18 | - |
| exon-intron | LOC105371958 | 18 | - | AP005230.1 | 18 | - |
| exon-exon | LOC105372061 | 18 | - | DTNA | 18 | - |
| exon-exon | LOC105372061 | 18 | - | DTNA | 18 | - |
| exon-exon | LOC105372061 | 18 | - | DTNA | 18 | - |
| intron-exon | LOC105372064 | 18 | - | GALNT1 | 18 | + |
| intron-exon | LOC105372064 | 18 | - | GALNT1 | 18 | - |
| exon-intron | LOC105372091 | 18 | + | SLC14A2 | 18 | + |
| intron-exon | LOC105372093 | 18 | + | SLC14A1 | 18 | + |
| intron-exon | LOC105372098 | 18 | - | KATNAL2 | 18 | - |
| intron-exon | LOC105372098 | 18 | - | KATNAL2 | 18 | - |
| intron-exon | LOC105372098 | 18 | - | KATNAL2 | 18 | - |
| intron-exon | LOC105372098 | 18 | - | KATNAL2 | 18 | - |
| intron-exon | LOC105372098 | 18 | - | KATNAL2 | 18 | - |
| intron-exon | LOC105372098 | 18 | - | KATNAL2 | 18 | - |
| exon-exon | LOC105372117 | 18 | + | SMAD4 | 18 | + |
| intron-exon | LOC105372117 | 18 | + | SMAD4 | 18 | + |
| exon-intron | LOC105372156 | 18 | + | AC010928.1 | 18 | + |
| exon-exon | LOC105372233 | 19 | + | BSG | 19 | + |
| intron-exon | LOC105372236 | 19 | - | LOC107985303 | 19 | - |
| intron-exon | LOC105372236 | 19 | - | LOC107985303 | 19 | - |
| intron-exon | LOC105372250 | 19 | - | DPP9 | 19 | - |
| intron-exon | LOC105372250 | 19 | - | DPP9 | 19 | - |
| exon-exon | LOC105372250 | 19 | - | DPP9 | 19 | - |
| exon-exon | LOC105372250 | 19 | - | DPP9 | 19 | - |
| exon-exon | LOC105372255 | 19 | - | RFX2 | 19 | - |
| intron-exon | LOC105372261 | 19 | - | TEX45 | 19 | - |
| intron-exon | LOC105372272 | 19 | + | ICAM1 | 19 | + |
| exon-intron | LOC105372279 | 19 | - | ZNF791 | 19 | - |
| exon-exon | LOC105372295 | 19 | + | SMIM7 | 19 | + |
| exon-exon | LOC105372295 | 19 | + | SMIM7 | 19 | + |
| exon-exon | LOC105372295 | 19 | + | SMIM7 | 19 | + |
| intron-exon | LOC105372310 | 19 | + | ZNF486 | 19 | + |
| exon-intron | LOC105372321 | 19 | + | ELF1 | 13 | + |
| intron-exon | LOC105372325 | 19 | + | ZNF208 | 19 | + |
| intron-exon | LOC105372394 | 19 | - | ZNF573 | 19 | - |
| intron-exon | LOC105372394 | 19 | - | ZNF573 | 19 | - |
| intron-exon | LOC105372394 | 19 | - | ZNF573 | 19 | - |
| intron-exon | LOC105372394 | 19 | - | ZNF573 | 19 | - |
| intron-exon | LOC105372411 | 19 | - | ZNF428 | 19 | - |
| intron-exon | LOC105372411 | 19 | - | GLRX3 | 10 | - |
| intron-exon | LOC105372424 | 19 | - | IGFL2 | 19 | - |
| intron-exon | LOC105372424 | 19 | - | IGFL2 | 19 | - |
| intron-exon | LOC105372424 | 19 | - | IGFL2 | 19 | - |
| intron-exon | LOC105372424 | 19 | - | IGFL2 | 19 | - |
| intron-exon | LOC105372424 | 19 | - | IGFL2 | 19 | - |
| intron-exon | LOC105372424 | 19 | - | IGFL2 | 19 | - |
| intron-exon | LOC105372424 | 19 | - | IGFL2 | 19 | - |
| intron-exon | LOC105372424 | 19 | - | IGFL2 | 19 | - |
| intron-exon | LOC105372424 | 19 | - | IGFL2 | 19 | - |
| intron-exon | LOC105372424 | 19 | - | IGFL2 | 19 | - |
| exon-exon | LOC105372426 | 19 | - | PPP5C | 19 | - |
| exon-exon | LOC105372426 | 19 | - | PPP5C | 19 | - |
| exon-exon | LOC105372426 | 19 | - | PPP5C | 19 | - |
| exon-exon | LOC105372426 | 19 | - | PPP5C | 19 | - |
| exon-exon | LOC105372426 | 19 | - | PPP5C | 19 | - |
| intron-exon | LOC105372437 | 19 | + | NR1H2 | 19 | + |
| intron-exon | LOC105372441 | 19 | - | KLK15 | 19 | - |
| exon-exon | LOC105372449 | 19 | - | PPP2R1A | 19 | - |
| intron-exon | LOC105372471 | 19 | - | ZNF667-AS1 | 19 | - |
| intron-exon | LOC105372471 | 19 | - | ZNF667-AS1 | 19 | - |
| intron-exon | LOC105372471 | 19 | - | ZNF667-AS1 | 19 | - |
| intron-exon | LOC105372480 | 19 | - | ZNF8-ERVK3-1 | 19 | - |
| exon-exon | LOC105372480 | 19 | - | ZNF8-ERVK3-1 | 19 | - |
| exon-intron | LOC105372480 | 19 | - | ZNF8-ERVK3-1 | 19 | - |
| intron-exon | LOC105372482 | 19 | - | ZNF544 | 19 | - |
| intron-exon | LOC105372482 | 19 | - | ZNF544 | 19 | - |
| intron-exon | LOC105372482 | 19 | - | ZNF544 | 19 | - |
| intron-exon | LOC105372482 | 19 | - | ZNF544 | 19 | - |
| intron-exon | LOC105372482 | 19 | - | ZNF544 | 19 | - |
| intron-exon | LOC105372482 | 19 | - | ZNF544 | 19 | - |
| intron-exon | LOC105372482 | 19 | - | ZNF544 | 19 | - |
| intron-exon | LOC105372482 | 19 | - | ZNF544 | 19 | - |
| intron-exon | LOC105372483 | 19 | - | ZNF497 | 19 | - |
| intron-exon | LOC105372483 | 19 | - | ZNF497 | 19 | - |
| exon-exon | LOC105372489 | 19 | - | SERTAD3 | 19 | - |
| exon-exon | LOC105372496 | 20 | - | PSMF1 | 20 | - |
| intron-exon | LOC105372520 | 20 | - | TMX4 | 20 | - |
| intron-exon | LOC105372520 | 20 | - | TMX4 | 20 | - |
| intron-exon | LOC105372520 | 20 | - | TMX4 | 20 | - |
| intron-exon | LOC105372520 | 20 | - | TMX4 | 20 | - |
| intron-exon | LOC105372520 | 20 | - | TMX4 | 20 | - |
| intron-exon | LOC105372520 | 20 | - | TMX4 | 20 | - |
| intron-exon | LOC105372520 | 20 | - | TMX4 | 20 | - |
| intron-exon | LOC105372520 | 20 | - | TMX4 | 20 | - |
| intron-exon | LOC105372520 | 20 | - | TMX4 | 20 | - |
| intron-exon | LOC105372520 | 20 | - | TMX4 | 20 | - |
| intron-exon | LOC105372520 | 20 | - | TMX4 | 20 | - |
| intron-exon | LOC105372520 | 20 | - | TMX4 | 20 | - |
| intron-exon | LOC105372520 | 20 | - | TMX4 | 20 | - |
| intron-exon | LOC105372520 | 20 | - | TMX4 | 20 | - |
| intron-exon | LOC105372520 | 20 | - | TMX4 | 20 | - |
| intron-exon | LOC105372520 | 20 | - | TMX4 | 20 | - |
| intron-exon | LOC105372520 | 20 | - | TMX4 | 20 | - |
| intron-exon | LOC105372520 | 20 | - | TMX4 | 20 | - |
| intron-exon | LOC105372520 | 20 | - | TMX4 | 20 | - |
| intron-exon | LOC105372520 | 20 | - | TMX4 | 20 | - |
| intron-exon | LOC105372520 | 20 | - | TMX4 | 20 | - |
| intron-exon | LOC105372520 | 20 | - | TMX4 | 20 | - |
| intron-exon | LOC105372521 | 20 | - | PLCB1 | 20 | - |
| intron-exon | LOC105372561 | 20 | - | ST13 | 22 | - |
| intron-exon | LOC105372561 | 20 | - | ST13 | 22 | - |
| intron-exon | LOC105372561 | 20 | - | ST13 | 22 | - |
| intron-exon | LOC105372561 | 20 | - | ST13 | 22 | - |
| intron-exon | LOC105372561 | 20 | - | ST13 | 22 | - |
| intron-exon | LOC105372561 | 20 | - | ST13 | 22 | - |
| intron-exon | LOC105372561 | 20 | - | ST13 | 22 | - |
| intron-exon | LOC105372561 | 20 | - | ST13 | 22 | - |
| exon-exon | LOC105372582 | 20 | - | LOC107985400 | 20 | - |
| exon-exon | LOC105372593 | 20 | - | BPIFA1 | 20 | - |
| exon-exon | LOC105372593 | 20 | - | BPIFA1 | 20 | - |
| exon-exon | LOC105372593 | 20 | - | BPIFA1 | 20 | - |
| exon-exon | LOC105372602 | 20 | - | EPB41L1 | 20 | - |
| intron-exon | LOC105372602 | 20 | - | EPB41L1 | 20 | - |
| intron-exon | LOC105372602 | 20 | - | EPB41L1 | 20 | - |
| intron-exon | LOC105372630 | 20 | - | SLPI | 20 | - |
| intron-exon | LOC105372630 | 20 | - | SLPI | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372633 | 20 | - | ELMO2 | 20 | - |
| intron-exon | LOC105372707 | 20 | - | ADRM1 | 20 | - |
| intron-exon | LOC105372707 | 20 | - | ADRM1 | 20 | - |
| intron-exon | LOC105372707 | 20 | - | ADRM1 | 20 | - |
| intron-exon | LOC105372707 | 20 | - | ADRM1 | 20 | - |
| intron-exon | LOC105372707 | 20 | - | ADRM1 | 20 | - |
| intron-exon | LOC105372707 | 20 | - | ADRM1 | 20 | - |
| intron-exon | LOC105372707 | 20 | - | ADRM1 | 20 | - |
| intron-exon | LOC105372707 | 20 | - | ADRM1 | 20 | - |
| exon-exon | LOC105372707 | 20 | - | ADRM1 | 20 | - |
| intron-exon | LOC105372762 | 21 | + | ZNF69 | 19 | - |
| exon-intron | LOC105372762 | 21 | - | AP001605.1 | 21 | - |
| intron-exon | LOC105372797 | 21 | - | TTC3 | 21 | - |
| intron-exon | LOC105372804 | 21 | + | NUP43 | 6 | + |
| exon-exon | LOC105372817 | 21 | + | NDUFV3 | 21 | + |
| exon-intron | LOC105372821 | 21 | + | CD2AP | 6 | + |
| exon-exon | LOC105372836 | 21 | + | ADARB1 | 21 | + |
| intron-exon | LOC105372857 | 1 | - | RHEX | 1 | - |
| intron-exon | LOC105372947 | 22 | - | IGLV3-19 | 22 | - |
| intron-exon | LOC105372947 | 22 | - | IGLV3-19 | 22 | - |
| intron-exon | LOC105372947 | 22 | - | IGLV3-19 | 22 | - |
| intron-exon | LOC105372947 | 22 | - | IGLV3-19 | 22 | - |
| intron-exon | LOC105372947 | 22 | - | IGLV3-19 | 22 | - |
| intron-exon | LOC105372947 | 22 | - | IGLV3-19 | 22 | - |
| exon-exon | LOC105372989 | 22 | - | RNF215 | 22 | - |
| intron-exon | LOC105372989 | 22 | - | SEC14L2 | 22 | - |
| intron-exon | LOC105372989 | 22 | - | SEC14L2 | 22 | - |
| exon-intron | LOC105372998 | 22 | + | FAM21FP | 10 | - |
| intron-exon | LOC105373024 | 22 | - | CYTH4 | 22 | - |
| intron-exon | LOC105373062 | 22 | - | PRR5-ARHGAP8 | 22 | - |
| intron-exon | LOC105373062 | 22 | - | PRR5-ARHGAP8 | 22 | - |
| intron-exon | LOC105373062 | 22 | - | PRR5-ARHGAP8 | 22 | - |
| intron-exon | LOC105373062 | 22 | - | PRR5-ARHGAP8 | 22 | - |
| intron-exon | LOC105373062 | 22 | - | PRR5-ARHGAP8 | 22 | - |
| intron-exon | LOC105373062 | 22 | - | PRR5-ARHGAP8 | 22 | - |
| intron-exon | LOC105373062 | 22 | - | PRR5-ARHGAP8 | 22 | - |
| exon-exon | LOC105373102 | Y | - | SLC25A6 | X | - |
| intron-exon | LOC105373119 | 1 | + | PSEN2 | 1 | + |
| exon-exon | LOC105373156 | X | - | NLGN4X | X | - |
| exon-exon | LOC105373166 | 1 | - | AGT | 1 | - |
| intron-exon | LOC105373166 | 1 | - | AGT | 1 | - |
| intron-exon | LOC105373194 | X | - | UBA1 | X | - |
| intron-exon | LOC105373194 | X | - | UBA1 | X | - |
| intron-exon | LOC105373194 | X | - | UBA1 | X | - |
| intron-exon | LOC105373194 | X | - | UBA1 | X | - |
| intron-exon | LOC105373194 | X | - | UBA1 | X | - |
| intron-exon | LOC105373194 | X | - | UBA1 | X | - |
| intron-exon | LOC105373194 | X | - | UBA1 | X | - |
| intron-exon | LOC105373194 | X | - | UBA1 | X | - |
| intron-exon | LOC105373194 | X | - | UBA1 | X | - |
| intron-exon | LOC105373194 | X | - | UBA1 | X | - |
| intron-exon | LOC105373194 | X | - | UBA1 | X | - |
| intron-exon | LOC105373194 | X | - | UBA1 | X | - |
| intron-exon | LOC105373194 | X | - | UBA1 | X | - |
| intron-exon | LOC105373194 | X | - | UBA1 | X | - |
| exon-intron | LOC105373230 | 1 | - | AL359764.2 | 1 | - |
| exon-exon | LOC105373233 | 1 | - | KMO | 1 | - |
| exon-exon | LOC105373233 | 1 | - | KMO | 1 | - |
| exon-exon | LOC105373233 | 1 | - | KMO | 1 | - |
| intron-exon | LOC105373299 | X | - | TCEAL6 | X | - |
| intron-exon | LOC105373302 | X | + | TCEAL3 | X | + |
| intron-exon | LOC105373335 | X | - | UTP14A | X | - |
| intron-exon | LOC105373358 | 2 | - | TMEM18-DT | 2 | - |
| intron-exon | LOC105373358 | 2 | - | TMEM18-DT | 2 | - |
| exon-exon | LOC105373370 | X | + | MAGEA3 | X | + |
| exon-exon | LOC105373415 | 2 | - | LOC105373416 | 2 | - |
| exon-exon | LOC105373428 | 2 | - | MDM4 | 1 | + |
| intron-exon | LOC105373437 | 2 | - | REREP3 | 15 | - |
| exon-exon | LOC105373449 | 2 | - | SMC6 | 2 | - |
| exon-exon | LOC105373449 | 2 | - | SMC6 | 2 | - |
| exon-exon | LOC105373449 | 2 | - | SMC6 | 2 | - |
| exon-exon | LOC105373449 | 2 | - | SMC6 | 2 | - |
| exon-intron | LOC105373467 | 1 | + | USP33 | 1 | + |
| intron-exon | LOC105373511 | 2 | - | CNOT11 | 2 | - |
| intron-exon | LOC105373511 | 2 | - | CNOT11 | 2 | - |
| intron-exon | LOC105373579 | 2 | - | RUVBL2 | 19 | - |
| intron-exon | LOC105373583 | 2 | + | RALB | 2 | + |
| intron-exon | LOC105373608 | 2 | - | PROC | 2 | - |
| intron-exon | LOC105373608 | 2 | - | CYP27C1 | 2 | - |
| intron-exon | LOC105373609 | 2 | - | MYO7B | 2 | - |
| exon-exon | LOC105373694 | 2 | - | LOC105373692 | 2 | - |
| exon-exon | LOC105373707 | 2 | - | GPD2 | 2 | - |
| exon-exon | LOC105373712 | 2 | - | CYTIP | 2 | - |
| exon-exon | LOC105373712 | 2 | - | CYTIP | 2 | - |
| exon-exon | LOC105373734 | 2 | + | LOC102724081 | 2 | + |
| exon-exon | LOC105373740 | 2 | - | SLC25A12 | 2 | - |
| exon-exon | LOC105373824 | 2 | - | ANKRD44 | 2 | - |
| exon-exon | LOC105373835 | 2 | + | FAM126B | 2 | + |
| intron-exon | LOC105373835 | 2 | - | ORC2 | 2 | - |
| exon-intron | LOC105373836 | 2 | - | FAM126B | 2 | - |
| intron-exon | LOC105373883 | 2 | + | DNPEP | 2 | + |
| intron-exon | LOC105373884 | 2 | - | DNPEP | 2 | - |
| intron-exon | LOC105373971 | 2 | - | PPP1R7 | 2 | - |
| intron-exon | LOC105373971 | 2 | - | PPP1R7 | 2 | - |
| intron-exon | LOC105373971 | 2 | - | PPP1R7 | 2 | - |
| intron-exon | LOC105373971 | 2 | - | PPP1R7 | 2 | - |
| intron-exon | LOC105373971 | 2 | - | PPP1R7 | 2 | - |
| intron-exon | LOC105373971 | 2 | - | PPP1R7 | 2 | - |
| intron-exon | LOC105373971 | 2 | - | PPP1R7 | 2 | - |
| intron-exon | LOC105373971 | 2 | - | PPP1R7 | 2 | - |
| intron-exon | LOC105373971 | 2 | - | PPP1R7 | 2 | - |
| intron-exon | LOC105373971 | 2 | - | PPP1R7 | 2 | - |
| intron-exon | LOC105373971 | 2 | - | PPP1R7 | 2 | - |
| intron-exon | LOC105373971 | 2 | - | PPP1R7 | 2 | - |
| intron-exon | LOC105373971 | 2 | - | PPP1R7 | 2 | - |
| intron-exon | LOC105373971 | 2 | - | PPP1R7 | 2 | - |
| intron-exon | LOC105373971 | 2 | - | PPP1R7 | 2 | - |
| intron-exon | LOC105373971 | 2 | - | PPP1R7 | 2 | - |
| intron-exon | LOC105373971 | 2 | - | PPP1R7 | 2 | - |
| intron-exon | LOC105373971 | 2 | - | PPP1R7 | 2 | - |
| intron-exon | LOC105373971 | 2 | - | PPP1R7 | 2 | - |
| intron-exon | LOC105373971 | 2 | - | PPP1R7 | 2 | - |
| intron-exon | LOC105373971 | 2 | - | PPP1R7 | 2 | - |
| intron-exon | LOC105373971 | 2 | - | PPP1R7 | 2 | - |
| intron-exon | LOC105373971 | 2 | - | PPP1R7 | 2 | - |
| intron-exon | LOC105373971 | 2 | - | PPP1R7 | 2 | - |
| intron-exon | LOC105373971 | 2 | - | PPP1R7 | 2 | - |
| intron-exon | LOC105373991 | 2 | + | ACKR3 | 2 | + |
| intron-exon | LOC105373991 | 2 | + | ACKR3 | 2 | + |
| exon-exon | LOC105373991 | 2 | + | ACKR3 | 2 | + |
| intron-exon | LOC105374009 | 3 | - | HP09053 | 3 | - |
| intron-exon | LOC105374009 | 3 | - | HP09053 | 3 | - |
| exon-intron | LOC105374013 | 3 | - | AC084198.2 | 3 | - |
| exon-exon | LOC105374021 | 3 | + | LOC107986107 | 3 | + |
| exon-exon | LOC105374042 | 3 | + | CD200 | 3 | + |
| intron-exon | LOC105374063 | 3 | + | COX17 | 3 | + |
| intron-exon | LOC105374063 | 3 | - | POPDC2 | 3 | - |
| intron-exon | LOC105374063 | 3 | - | POPDC2 | 3 | - |
| intron-exon | LOC105374063 | 3 | - | POPDC2 | 3 | - |
| intron-exon | LOC105374063 | 3 | - | POPDC2 | 3 | - |
| intron-exon | LOC105374063 | 3 | - | POPDC2 | 3 | - |
| intron-exon | LOC105374063 | 3 | - | POPDC2 | 3 | - |
| exon-exon | LOC105374114 | 3 | - | MRPL3 | 3 | - |
| exon-exon | LOC105374114 | 3 | - | MRPL3 | 3 | - |
| exon-exon | LOC105374114 | 3 | - | MRPL3 | 3 | - |
| exon-exon | LOC105374114 | 3 | - | MRPL3 | 3 | - |
| exon-exon | LOC105374114 | 3 | - | MRPL3 | 3 | - |
| exon-exon | LOC105374114 | 3 | - | MRPL3 | 3 | - |
| exon-exon | LOC105374114 | 3 | - | MRPL3 | 3 | - |
| exon-exon | LOC105374114 | 3 | - | MRPL3 | 3 | - |
| exon-exon | LOC105374114 | 3 | - | MRPL3 | 3 | - |
| exon-exon | LOC105374114 | 3 | - | MRPL3 | 3 | - |
| exon-exon | LOC105374114 | 3 | - | MRPL3 | 3 | - |
| exon-exon | LOC105374114 | 3 | - | MRPL3 | 3 | - |
| exon-exon | LOC105374114 | 3 | - | MRPL3 | 3 | - |
| exon-exon | LOC105374114 | 3 | - | MRPL3 | 3 | - |
| exon-exon | LOC105374114 | 3 | - | MRPL3 | 3 | - |
| exon-exon | LOC105374114 | 3 | - | MRPL3 | 3 | - |
| exon-exon | LOC105374114 | 3 | - | MRPL3 | 3 | - |
| exon-exon | LOC105374114 | 3 | - | MRPL3 | 3 | - |
| exon-exon | LOC105374114 | 3 | - | MRPL3 | 3 | - |
| exon-exon | LOC105374114 | 3 | - | MRPL3 | 3 | - |
| exon-exon | LOC105374114 | 3 | - | MRPL3 | 3 | - |
| exon-intron | LOC105374114 | 3 | - | MRPL3 | 3 | - |
| exon-exon | LOC105374114 | 3 | - | MRPL3 | 3 | - |
| intron-exon | LOC105374155 | 3 | - | SIAH2 | 3 | - |
| intron-exon | LOC105374155 | 3 | - | SIAH2 | 3 | - |
| intron-exon | LOC105374197 | 3 | + | WDR49 | 3 | + |
| exon-exon | LOC105374240 | 3 | + | FXR1 | 3 | + |
| exon-exon | LOC105374240 | 3 | + | FXR1 | 3 | + |
| exon-exon | LOC105374240 | 3 | - | LOC101928882 | 3 | - |
| exon-exon | LOC105374240 | 3 | - | LOC101928882 | 3 | - |
| exon-exon | LOC105374240 | 3 | - | LOC101928882 | 3 | - |
| intron-exon | LOC105374258 | 3 | + | HRG | 3 | + |
| intron-exon | LOC105374258 | 3 | - | FETUB | 3 | - |
| exon-intron | LOC105374297 | 3 | - | LOC105374298 | 3 | - |
| exon-intron | LOC105374297 | 3 | - | LOC105374298 | 3 | - |
| exon-intron | LOC105374298 | 3 | - | TRA2A | 7 | - |
| intron-exon | LOC105374310 | 3 | - | LRCH3 | 3 | - |
| intron-exon | LOC105374328 | 2 | - | FAM228B | 2 | - |
| intron-exon | LOC105374328 | 2 | - | FAM228B | 2 | - |
| intron-exon | LOC105374328 | 2 | - | FAM228B | 2 | - |
| intron-exon | LOC105374328 | 2 | - | FAM228B | 2 | - |
| intron-exon | LOC105374328 | 2 | - | FAM228B | 2 | - |
| intron-exon | LOC105374328 | 2 | - | FAM228B | 2 | - |
| intron-exon | LOC105374328 | 2 | - | FAM228B | 2 | - |
| intron-exon | LOC105374328 | 2 | - | FAM228B | 2 | - |
| intron-exon | LOC105374328 | 2 | - | FAM228B | 2 | - |
| intron-exon | LOC105374328 | 2 | - | FAM228B | 2 | - |
| intron-exon | LOC105374328 | 2 | - | FAM228B | 2 | - |
| intron-exon | LOC105374328 | 2 | - | FAM228B | 2 | - |
| intron-exon | LOC105374328 | 2 | - | FAM228B | 2 | - |
| intron-exon | LOC105374328 | 2 | - | FAM228B | 2 | - |
| intron-exon | LOC105374328 | 2 | - | FAM228B | 2 | - |
| intron-exon | LOC105374328 | 2 | - | FAM228B | 2 | - |
| intron-exon | LOC105374347 | 4 | - | CTBP1 | 4 | - |
| intron-exon | LOC105374347 | 4 | - | CTBP1 | 4 | - |
| exon-exon | LOC105374376 | 4 | + | TRMT44 | 4 | + |
| exon-exon | LOC105374392 | 4 | + | LOC101928622 | 4 | + |
| exon-intron | LOC105374413 | 4 | + | LOC105374412 | 4 | + |
| exon-exon | LOC105374465 | 2 | - | CDC42EP3 | 2 | - |
| intron-exon | LOC105374497 | 2 | + | LINC01794 | 2 | + |
| exon-intron | LOC105374535 | 4 | - | SEPSECS-AS1 | 4 | - |
| exon-intron | LOC105374535 | 4 | - | SEPSECS-AS1 | 4 | - |
| exon-intron | LOC105374556 | 4 | - | LOC105374557 | 4 | - |
| exon-intron | LOC105374645 | 5 | + | GCC2-AS1 | 2 | - |
| intron-exon | LOC105374724 | 5 | + | IL7R | 5 | + |
| intron-exon | LOC105374785 | 2 | - | LINC01799 | 2 | - |
| exon-exon | LOC105374786 | 2 | + | LINC02831 | 2 | + |
| intron-exon | LOC105374819 | 2 | - | LOC105374820 | 2 | - |
| intron-exon | LOC105374836 | 2 | + | TMSB10 | 2 | + |
| intron-exon | LOC105374838 | 2 | + | ZNF165 | 6 | + |
| intron-exon | LOC105374846 | 2 | + | CD8B2 | 2 | - |
| exon-intron | LOC105374868 | 2 | + | GGT8P | 2 | + |
| intron-exon | LOC105374938 | 6 | - | SIRT5 | 6 | - |
| intron-exon | LOC105374938 | 6 | - | SIRT5 | 6 | - |
| intron-exon | LOC105374938 | 6 | - | SIRT5 | 6 | - |
| intron-exon | LOC105374938 | 6 | - | SIRT5 | 6 | - |
| intron-exon | LOC105374940 | 6 | - | CD83 | 6 | - |
| exon-exon | LOC105374952 | 6 | + | NUP153 | 6 | + |
| exon-exon | LOC105374952 | 6 | - | NUP153 | 6 | - |
| exon-exon | LOC105374952 | 6 | - | NUP153 | 6 | - |
| exon-exon | LOC105374952 | 6 | - | NUP153 | 6 | - |
| intron-exon | LOC105374961 | 6 | + | UQCRB | 8 | - |
| exon-intron | LOC105374985 | 6 | + | H4C8 | 6 | + |
| intron-exon | LOC105375019 | 6 | + | ABHD16A | 6 | + |
| exon-intron | LOC105375019 | 6 | - | LY6G5C | 6 | - |
| exon-intron | LOC105375019 | 6 | - | LY6G5C | 6 | - |
| intron-exon | LOC105375020 | 6 | - | CLIC1 | 6 | - |
| exon-intron | LOC105375026 | 6 | + | AL138889.1 | 6 | + |
| intron-exon | LOC105375026 | 6 | - | LINC01016 | 6 | - |
| intron-exon | LOC105375047 | 6 | + | KIF6 | 6 | + |
| intron-exon | LOC105375047 | 6 | - | KCNK17 | 6 | - |
| intron-exon | LOC105375065 | 6 | + | POLH | 6 | + |
| exon-exon | LOC105375106 | 6 | + | CARMIL1 | 6 | + |
| exon-exon | LOC105375120 | 7 | + | GPER1 | 7 | + |
| intron-exon | LOC105375147 | 7 | - | LOC105375148 | 7 | - |
| exon-intron | LOC105375153 | 7 | + | THSD7A | 7 | + |
| intron-exon | LOC105375168 | 7 | - | SOSTDC1 | 7 | - |
| intron-exon | LOC105375168 | 7 | - | SOSTDC1 | 7 | - |
| intron-exon | LOC105375168 | 7 | - | SOSTDC1 | 7 | - |
| intron-exon | LOC105375168 | 7 | - | SOSTDC1 | 7 | - |
| intron-exon | LOC105375168 | 7 | - | SOSTDC1 | 7 | - |
| intron-exon | LOC105375168 | 7 | - | SOSTDC1 | 7 | - |
| exon-intron | LOC105375220 | 7 | + | INMT-MINDY4 | 7 | + |
| intron-exon | LOC105375228 | 7 | - | DPY19L1 | 7 | - |
| intron-exon | LOC105375242 | 7 | - | SUGCT | 7 | - |
| exon-intron | LOC105375296 | 7 | + | LOC100101483 | 7 | + |
| intron-exon | LOC105375302 | 7 | - | LOC107987000 | 9 | + |
| exon-intron | LOC105375314 | 7 | + | LOC105375295 | 7 | - |
| exon-exon | LOC105375317 | 7 | - | LINC01005 | 7 | - |
| exon-intron | LOC105375322 | 7 | + | ZNF736 | 7 | + |
| exon-exon | LOC105375322 | 7 | + | ZNF736 | 7 | + |
| exon-exon | LOC105375361 | 7 | - | FDPSP2 | 7 | - |
| intron-exon | LOC105375368 | 7 | - | ND4L | MT | + |
| intron-exon | LOC105375404 | 7 | + | CASD1 | 7 | + |
| exon-exon | LOC105375410 | 7 | - | SLC25A13 | 7 | - |
| intron-exon | LOC105375410 | 7 | - | SLC25A13 | 7 | - |
| exon-exon | LOC105375489 | 7 | - | ARF5 | 7 | - |
| exon-exon | LOC105375489 | 7 | - | ARF5 | 7 | - |
| exon-exon | LOC105375489 | 7 | - | ARF5 | 7 | - |
| exon-exon | LOC105375489 | 7 | - | ARF5 | 7 | - |
| exon-exon | LOC105375489 | 7 | - | ARF5 | 7 | - |
| exon-exon | LOC105375489 | 7 | - | ARF5 | 7 | - |
| exon-exon | LOC105375489 | 7 | - | ARF5 | 7 | - |
| exon-exon | LOC105375489 | 7 | - | ARF5 | 7 | - |
| exon-exon | LOC105375489 | 7 | - | ARF5 | 7 | - |
| exon-exon | LOC105375489 | 7 | - | ARF5 | 7 | - |
| exon-exon | LOC105375489 | 7 | - | ARF5 | 7 | - |
| exon-exon | LOC105375489 | 7 | - | ARF5 | 7 | - |
| exon-exon | LOC105375489 | 7 | - | ARF5 | 7 | - |
| exon-exon | LOC105375489 | 7 | - | ARF5 | 7 | - |
| exon-exon | LOC105375489 | 7 | - | ARF5 | 7 | - |
| exon-exon | LOC105375489 | 7 | - | ARF5 | 7 | - |
| exon-intron | LOC105375541 | 7 | - | TRBV30 | 7 | - |
| exon-exon | LOC105375546 | 7 | + | GSTK1 | 7 | + |
| exon-intron | LOC105375591 | 7 | + | INSIG1 | 7 | + |
| intron-exon | LOC105375630 | 8 | - | MMP16 | 8 | - |
| intron-exon | LOC105375631 | 8 | + | EIF3J | 15 | + |
| exon-intron | LOC105375633 | 8 | - | LOC102724670 | 8 | - |
| exon-exon | LOC105375633 | 8 | - | TMEM64 | 8 | - |
| intron-exon | LOC105375659 | 8 | - | NIPAL2 | 8 | - |
| intron-exon | LOC105375659 | 8 | - | NIPAL2 | 8 | - |
| exon-intron | LOC105375670 | 8 | + | LOC102724843 | 21 | + |
| intron-exon | LOC105375689 | 8 | - | RIMS2 | 8 | - |
| exon-exon | LOC105375725 | 8 | + | MAL2 | 8 | + |
| exon-exon | LOC105375725 | 8 | + | MAL2 | 8 | + |
| intron-exon | LOC105375727 | 8 | - | ENPP2 | 8 | - |
| exon-exon | LOC105375730 | 8 | + | COL14A1 | 8 | + |
| intron-exon | LOC105375739 | 8 | - | ANXA13 | 8 | - |
| intron-exon | LOC105375835 | 8 | - | RB1CC1 | 8 | - |
| exon-intron | LOC105375878 | 8 | - | LOC105375879 | 8 | - |
| exon-intron | LOC105375901 | 8 | + | C8orf89 | 8 | + |
| intron-exon | LOC105375904 | 8 | + | MIR2052HG | 8 | + |
| intron-exon | LOC105375911 | 8 | + | PKIA | 8 | + |
| intron-exon | LOC105375911 | 8 | + | PKIA | 8 | + |
| intron-exon | LOC105375916 | 8 | + | STMN2 | 8 | + |
| intron-exon | LOC105375916 | 8 | + | STMN2 | 8 | + |
| exon-exon | LOC105375920 | 8 | - | TPD52 | 8 | - |
| intron-exon | LOC105375957 | 9 | - | VLDLR | 9 | - |
| intron-exon | LOC105375957 | 9 | - | VLDLR | 9 | - |
| intron-exon | LOC105375957 | 9 | - | VLDLR | 9 | - |
| exon-intron | LOC105375981 | 9 | - | CLCN3P1 | 9 | - |
| intron-exon | LOC105376032 | 9 | + | PAX5 | 9 | + |
| intron-exon | LOC105376037 | 9 | + | DCAF10 | 9 | + |
| exon-intron | LOC105376041 | 9 | + | AL390726.6 | 9 | + |
| exon-exon | LOC105376060 | 9 | - | CBWD6 | 9 | - |
| intron-exon | LOC105376065 | 9 | - | LOC107984035 | 9 | - |
| exon-exon | LOC105376114 | 9 | - | UBQLN1 | 9 | - |
| intron-exon | LOC105376166 | 9 | - | FAM220CP | 9 | - |
| intron-exon | LOC105376196 | 9 | - | ABCA1 | 9 | - |
| intron-exon | LOC105376196 | 9 | - | ABCA1 | 9 | - |
| exon-exon | LOC105376199 | 9 | + | FKTN | 9 | + |
| exon-intron | LOC105376277 | 9 | - | AL161908.1 | 9 | - |
| exon-intron | LOC105376277 | 9 | - | AL161908.1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| intron-exon | LOC105376294 | 9 | - | ASS1 | 9 | - |
| exon-intron | LOC105376333 | 9 | - | LOC105375292 | 7 | + |
| exon-intron | LOC105376363 | 10 | - | AL450322.2 | 10 | - |
| exon-exon | LOC105376384 | 10 | - | FBH1 | 10 | - |
| exon-exon | LOC105376384 | 10 | - | FBH1 | 10 | - |
| exon-exon | LOC105376384 | 10 | - | FBH1 | 10 | - |
| exon-exon | LOC105376384 | 10 | - | FBH1 | 10 | - |
| exon-exon | LOC105376384 | 10 | - | FBH1 | 10 | - |
| exon-exon | LOC105376384 | 10 | - | FBH1 | 10 | - |
| exon-exon | LOC105376384 | 10 | - | FBH1 | 10 | - |
| exon-exon | LOC105376384 | 10 | - | FBH1 | 10 | - |
| exon-exon | LOC105376384 | 10 | - | FBH1 | 10 | - |
| exon-exon | LOC105376384 | 10 | - | FBH1 | 10 | - |
| intron-exon | LOC105376392 | 10 | - | ATP5F1C | 10 | - |
| intron-exon | LOC105376392 | 10 | - | ATP5F1C | 10 | - |
| intron-exon | LOC105376392 | 10 | - | ATP5F1C | 10 | - |
| intron-exon | LOC105376392 | 10 | - | ATP5F1C | 10 | - |
| intron-exon | LOC105376392 | 10 | - | ATP5F1C | 10 | - |
| intron-exon | LOC105376392 | 10 | - | ATP5F1C | 10 | - |
| intron-exon | LOC105376392 | 10 | - | ATP5F1C | 10 | - |
| intron-exon | LOC105376392 | 10 | - | ATP5F1C | 10 | - |
| intron-exon | LOC105376392 | 10 | - | ATP5F1C | 10 | - |
| intron-exon | LOC105376392 | 10 | - | ATP5F1C | 10 | - |
| intron-exon | LOC105376392 | 10 | - | ATP5F1C | 10 | - |
| intron-exon | LOC105376392 | 10 | - | ATP5F1C | 10 | - |
| intron-exon | LOC105376392 | 10 | - | ATP5F1C | 10 | - |
| intron-exon | LOC105376392 | 10 | - | ATP5F1C | 10 | - |
| exon-exon | LOC105376392 | 10 | - | ATP5F1C | 10 | - |
| exon-exon | LOC105376392 | 10 | - | ATP5F1C | 10 | - |
| exon-exon | LOC105376392 | 10 | - | ATP5F1C | 10 | - |
| exon-exon | LOC105376392 | 10 | - | ATP5F1C | 10 | - |
| exon-exon | LOC105376392 | 10 | - | ATP5F1C | 10 | - |
| exon-exon | LOC105376392 | 10 | - | ATP5F1C | 10 | - |
| exon-exon | LOC105376392 | 10 | - | ATP5F1C | 10 | - |
| intron-exon | LOC105376392 | 10 | - | ATP5F1C | 10 | - |
| exon-exon | LOC105376392 | 10 | - | ATP5F1C | 10 | - |
| exon-exon | LOC105376392 | 10 | - | ATP5F1C | 10 | - |
| exon-exon | LOC105376392 | 10 | - | ATP5F1C | 10 | - |
| exon-exon | LOC105376392 | 10 | - | ATP5F1C | 10 | - |
| exon-exon | LOC105376392 | 10 | - | ATP5F1C | 10 | - |
| exon-exon | LOC105376392 | 10 | - | ATP5F1C | 10 | - |
| exon-exon | LOC105376392 | 10 | - | ATP5F1C | 10 | - |
| exon-exon | LOC105376392 | 10 | - | ATP5F1C | 10 | - |
| exon-exon | LOC105376392 | 10 | - | ATP5F1C | 10 | - |
| exon-exon | LOC105376392 | 10 | - | ATP5F1C | 10 | - |
| intron-exon | LOC105376392 | 10 | - | ATP5F1C | 10 | - |
| exon-exon | LOC105376392 | 10 | - | ATP5F1C | 10 | - |
| exon-exon | LOC105376392 | 10 | - | ATP5F1C | 10 | - |
| exon-exon | LOC105376392 | 10 | - | ATP5F1C | 10 | - |
| intron-exon | LOC105376434 | 10 | - | METTL9 | 16 | + |
| intron-exon | LOC105376500 | 10 | + | CCNYL4 | 10 | + |
| intron-exon | LOC105376514 | 11 | - | BRSK2 | 11 | - |
| intron-exon | LOC105376541 | 11 | + | SLC46A1 | 17 | - |
| intron-exon | LOC105376541 | 11 | - | NRIP3 | 11 | - |
| exon-exon | LOC105376547 | 11 | - | LOC112268072 | 11 | - |
| intron-exon | LOC105376567 | 11 | - | LOC102724957 | 11 | - |
| exon-exon | LOC105376571 | 11 | + | C11orf58 | 11 | + |
| exon-intron | LOC105376579 | 11 | + | PTPN5 | 11 | + |
| intron-exon | LOC105376615 | 11 | - | QSER1 | 11 | - |
| exon-intron | LOC105376714 | 15 | + | SLC30A4 | 15 | + |
| intron-exon | LOC105376755 | 2 | - | SLC2A8 | 9 | - |
| intron-exon | LOC105376755 | 2 | - | SLC2A8 | 9 | - |
| exon-intron | LOC105376781 | 16 | + | FAM157C | 16 | + |
| exon-exon | LOC105376781 | 16 | + | LOC102723777 | 17 | - |
| exon-intron | LOC105376781 | 16 | - | FAM157C | 16 | - |
| exon-intron | LOC105376829 | 1 | + | EIF4G3 | 1 | - |
| intron-exon | LOC105376845 | 1 | - | WNT4 | 1 | - |
| exon-intron | LOC105376860 | 1 | - | LYPLA2 | 1 | - |
| exon-exon | LOC105376861 | 1 | - | HMGCL | 1 | - |
| exon-exon | LOC105376861 | 1 | - | HMGCL | 1 | - |
| exon-exon | LOC105376861 | 1 | - | HMGCL | 1 | - |
| exon-exon | LOC105376861 | 1 | - | HMGCL | 1 | - |
| exon-intron | LOC105376861 | 1 | - | HMGCL | 1 | - |
| exon-exon | LOC105376861 | 1 | - | HMGCL | 1 | - |
| intron-exon | LOC105376885 | 1 | - | STMN1 | 1 | - |
| intron-exon | LOC105376885 | 1 | - | STMN1 | 1 | - |
| intron-exon | LOC105376885 | 1 | - | STMN1 | 1 | - |
| exon-exon | LOC105376917 | 19 | - | ZNF98 | 19 | - |
| exon-exon | LOC105376917 | 19 | - | ZNF98 | 19 | - |
| exon-intron | LOC105376945 | 3 | + | GRM7 | 3 | + |
| exon-exon | LOC105376945 | 3 | + | GRM7 | 3 | + |
| intron-exon | LOC105377043 | 3 | - | PLBD1 | 12 | - |
| exon-intron | LOC105377067 | 3 | + | CCR3 | 3 | + |
| exon-intron | LOC105377134 | 21 | + | ERLEC1P1 | 21 | + |
| exon-intron | LOC105377183 | 3 | - | AC023503.1 | 3 | - |
| exon-intron | LOC105377246 | 4 | - | RP11-506N2.1 | 4 | - |
| exon-intron | LOC105377246 | 4 | - | RP11-506N2.1 | 4 | - |
| intron-exon | LOC105377291 | 4 | - | SEPTIN11 | 4 | - |
| exon-exon | LOC105377295 | 4 | + | CCNG2 | 4 | + |
| exon-exon | LOC105377335 | 4 | - | LOC105377335 | 4 | + |
| exon-exon | LOC105377362 | 4 | + | ENPEP | 4 | + |
| exon-exon | LOC105377400 | 4 | - | NDNF | 4 | - |
| exon-exon | LOC105377413 | 4 | - | LOC105377412 | 4 | - |
| intron-exon | LOC105377414 | 4 | - | SLC25A31 | 4 | - |
| intron-exon | LOC105377448 | 4 | - | PSMA3 | 14 | + |
| exon-exon | LOC105377449 | 4 | + | NAA15 | 4 | + |
| intron-exon | LOC105377462 | 4 | - | LOC105377461 | 4 | - |
| intron-exon | LOC105377506 | 4 | - | GUCY1A1 | 4 | - |
| intron-exon | LOC105377506 | 4 | - | GUCY1A1 | 4 | - |
| intron-exon | LOC105377506 | 4 | - | GUCY1A1 | 4 | - |
| exon-exon | LOC105377507 | 4 | + | TDO2 | 4 | + |
| intron-exon | LOC105377507 | 4 | + | TDO2 | 4 | + |
| exon-exon | LOC105377519 | 4 | + | CPE | 4 | + |
| exon-exon | LOC105377548 | 4 | - | HPGD | 4 | - |
| intron-exon | LOC105377558 | 4 | - | NEIL3 | 4 | - |
| intron-exon | LOC105377558 | 4 | - | NEIL3 | 4 | - |
| exon-exon | LOC105377590 | 4 | - | CCDC110 | 4 | - |
| intron-exon | LOC105377621 | 4 | - | SLC39A8 | 4 | - |
| exon-exon | LOC105377622 | 4 | - | SETD7 | 4 | - |
| exon-exon | LOC105377622 | 4 | - | SETD7 | 4 | - |
| exon-intron | LOC105377635 | 2 | + | IGL | 22 | - |
| intron-exon | LOC105377659 | 4 | - | SRD5A3-AS1 | 4 | - |
| exon-exon | LOC105377665 | 4 | - | ARL9 | 4 | - |
| exon-exon | LOC105377665 | 4 | - | ARL9 | 4 | - |
| exon-exon | LOC105377665 | 4 | - | ARL9 | 4 | - |
| exon-exon | LOC105377665 | 4 | - | ARL9 | 4 | - |
| exon-exon | LOC105377700 | 5 | + | CCNG1 | 5 | + |
| intron-exon | LOC105377739 | 5 | - | LINC01411 | 5 | - |
| exon-exon | LOC105377763 | 5 | + | BCR | 22 | + |
| exon-exon | LOC105377826 | 17 | - | LOC102723777 | 17 | - |
| exon-intron | LOC105377844 | 6 | - | AL713998.3 | 6 | - |
| exon-intron | LOC105377935 | 6 | + | AK9 | 6 | + |
| exon-intron | LOC105377986 | 6 | - | AL365259.1 | 6 | - |
| intron-exon | LOC105378011 | 6 | - | MYB | 6 | - |
| intron-exon | LOC105378011 | 6 | - | MYB | 6 | - |
| intron-exon | LOC105378041 | 6 | - | ADGB | 6 | - |
| intron-exon | LOC105378093 | 6 | - | LOC112267969 | 6 | - |
| intron-exon | LOC105378093 | 6 | - | LOC112267969 | 6 | - |
| exon-intron | LOC105378179 | 14 | + | DHRSX | X | - |
| exon-intron | LOC105378179 | 14 | + | SOS2 | 14 | + |
| exon-intron | LOC105378179 | 14 | + | LOC100506446 | 14 | + |
| exon-intron | LOC105378179 | 14 | + | MROH1 | 8 | + |
| exon-intron | LOC105378179 | 14 | + | LYZ | 12 | + |
| exon-intron | LOC105378179 | 14 | + | L2HGDH | 14 | + |
| exon-intron | LOC105378179 | 14 | + | UBR1 | 15 | - |
| exon-intron | LOC105378179 | 14 | + | UBR1 | 15 | - |
| exon-exon | LOC105378179 | 14 | + | MCM8 | 20 | + |
| exon-exon | LOC105378179 | 14 | - | LOC105378179 | 14 | + |
| exon-intron | LOC105378179 | 14 | - | RPS29 | 14 | - |
| exon-intron | LOC105378179 | 14 | - | RPS29 | 14 | - |
| exon-intron | LOC105378179 | 14 | - | RPS29 | 14 | - |
| exon-intron | LOC105378179 | 14 | - | RPS29 | 14 | - |
| exon-intron | LOC105378179 | 14 | - | RPS29 | 14 | - |
| exon-intron | LOC105378179 | 14 | - | NEMF | 14 | - |
| exon-exon | LOC105378180 | 14 | - | NID2 | 14 | - |
| exon-exon | LOC105378180 | 14 | - | NID2 | 14 | - |
| intron-exon | LOC105378199 | 5 | + | TAF7 | 5 | + |
| exon-intron | LOC105378213 | 5 | - | AC011396.2 | 5 | - |
| intron-exon | LOC105378225 | 5 | - | ARSI | 5 | - |
| exon-exon | LOC105378230 | 5 | + | GM2A | 5 | + |
| exon-exon | LOC105378230 | 5 | - | CCDC69 | 5 | - |
| exon-exon | LOC105378230 | 5 | - | CCDC69 | 5 | - |
| exon-exon | LOC105378230 | 5 | - | CCDC69 | 5 | - |
| exon-exon | LOC105378230 | 5 | - | CCDC69 | 5 | - |
| exon-exon | LOC105378230 | 5 | - | CCDC69 | 5 | - |
| exon-exon | LOC105378230 | 5 | - | CCDC69 | 5 | - |
| exon-exon | LOC105378230 | 5 | - | CCDC69 | 5 | - |
| exon-exon | LOC105378230 | 5 | - | CCDC69 | 5 | - |
| exon-exon | LOC105378230 | 5 | - | CCDC69 | 5 | - |
| exon-exon | LOC105378230 | 5 | - | CCDC69 | 5 | - |
| exon-exon | LOC105378230 | 5 | - | CCDC69 | 5 | - |
| intron-exon | LOC105378287 | 10 | + | NEFM | 8 | - |
| intron-exon | LOC105378287 | 10 | + | NEFM | 8 | - |
| exon-intron | LOC105378298 | 10 | - | WDFY4 | 10 | - |
| intron-exon | LOC105378298 | 10 | - | WDFY4 | 10 | - |
| exon-intron | LOC105378299 | 10 | - | WDFY4 | 10 | - |
| exon-exon | LOC105378299 | 10 | - | WDFY4 | 10 | - |
| intron-exon | LOC105378329 | 10 | - | REEP3 | 10 | - |
| intron-exon | LOC105378329 | 10 | - | REEP3 | 10 | - |
| intron-exon | LOC105378329 | 10 | - | REEP3 | 10 | - |
| exon-intron | LOC105378355 | 10 | - | CDH23 | 10 | - |
| intron-exon | LOC105378360 | 10 | - | SYNPO2L | 10 | - |
| intron-exon | LOC105378360 | 10 | - | SYNPO2L | 10 | - |
| intron-exon | LOC105378360 | 10 | - | SYNPO2L | 10 | - |
| exon-exon | LOC105378419 | 10 | - | LIPA | 10 | - |
| exon-intron | LOC105378419 | 10 | - | LIPA | 10 | - |
| exon-exon | LOC105378419 | 10 | - | LIPA | 10 | - |
| exon-intron | LOC105378443 | 10 | - | TM9SF3 | 10 | - |
| intron-exon | LOC105378474 | 10 | - | LOC105378475 | 10 | - |
| exon-intron | LOC105378475 | 10 | + | LOC105378474 | 10 | + |
| intron-exon | LOC105378500 | 10 | + | SLC18A2 | 10 | + |
| intron-exon | LOC105378519 | 10 | - | WDR11 | 10 | - |
| intron-exon | LOC105378552 | 10 | - | DOCK1 | 10 | - |
| intron-exon | LOC105378647 | 1 | - | AGO3 | 1 | - |
| intron-exon | LOC105378657 | 1 | + | LINC01685 | 1 | + |
| exon-exon | LOC105378663 | 1 | + | LOC105378662 | 1 | + |
| intron-exon | LOC105378690 | 1 | - | ARMH1 | 1 | - |
| intron-exon | LOC105378690 | 1 | - | ARMH1 | 1 | - |
| exon-exon | LOC105378699 | 1 | + | CYP4B1 | 1 | + |
| intron-exon | LOC105378745 | 1 | - | C8B | 1 | - |
| intron-exon | LOC105378745 | 1 | - | C8B | 1 | - |
| intron-exon | LOC105378745 | 1 | - | C8B | 1 | - |
| intron-exon | LOC105378745 | 1 | - | C8B | 1 | - |
| exon-exon | LOC105378843 | 1 | - | GBP4 | 1 | - |
| exon-intron | LOC105378861 | 1 | + | SLC44A3-AS1 | 1 | + |
| intron-exon | LOC105378862 | 1 | - | CNN3 | 1 | - |
| exon-intron | LOC105378898 | 1 | + | AL358215.2 | 1 | + |
| exon-exon | LOC105378898 | 1 | + | CYMP | 1 | + |
| exon-exon | LOC105378948 | 1 | - | LOC100288175 | 1 | - |
| exon-exon | LOC105378980 | 5 | - | MAP3K1 | 5 | - |
| exon-exon | LOC105379028 | 5 | + | MAP1B | 5 | + |
| exon-exon | LOC105379028 | 5 | + | MAP1B | 5 | + |
| intron-exon | LOC105379094 | 5 | - | CAST | 5 | - |
| intron-exon | LOC105379104 | 5 | - | LINC00491 | 5 | - |
| intron-exon | LOC105379154 | 5 | + | SNX24 | 5 | + |
| exon-exon | LOC105379167 | 5 | - | FBN2 | 5 | - |
| exon-exon | LOC105379167 | 5 | - | FBN2 | 5 | - |
| exon-intron | LOC105379167 | 5 | - | FBN2 | 5 | - |
| intron-exon | LOC105379173 | 5 | - | CDC42SE2 | 5 | - |
| intron-exon | LOC105379173 | 5 | - | CDC42SE2 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| intron-exon | LOC105379193 | 5 | - | HSPA9 | 5 | - |
| exon-exon | LOC105379194 | 5 | + | CTNNA1 | 5 | + |
| exon-exon | LOC105379208 | 15 | - | LOC102724971 | 15 | - |
| exon-exon | LOC105379243 | 8 | - | NEIL2 | 8 | - |
| exon-exon | LOC105379243 | 8 | - | NEIL2 | 8 | - |
| exon-exon | LOC105379243 | 8 | - | NEIL2 | 8 | - |
| intron-exon | LOC105379243 | 8 | - | NEIL2 | 8 | - |
| intron-exon | LOC105379243 | 8 | - | NEIL2 | 8 | - |
| intron-exon | LOC105379243 | 8 | - | NEIL2 | 8 | - |
| intron-exon | LOC105379243 | 8 | - | NEIL2 | 8 | - |
| intron-exon | LOC105379243 | 8 | - | NEIL2 | 8 | - |
| intron-exon | LOC105379243 | 8 | - | NEIL2 | 8 | - |
| intron-exon | LOC105379243 | 8 | - | NEIL2 | 8 | - |
| intron-exon | LOC105379243 | 8 | - | NEIL2 | 8 | - |
| intron-exon | LOC105379243 | 8 | - | NEIL2 | 8 | - |
| intron-exon | LOC105379243 | 8 | - | NEIL2 | 8 | - |
| intron-exon | LOC105379243 | 8 | - | NEIL2 | 8 | - |
| intron-exon | LOC105379243 | 8 | - | NEIL2 | 8 | - |
| exon-intron | LOC105379273 | Y | - | CR381670.2 | 21 | - |
| intron-exon | LOC105379382 | 8 | + | LSM1 | 8 | + |
| intron-exon | LOC105379393 | 8 | - | KAT6A | 8 | - |
| intron-exon | LOC105379393 | 8 | - | KAT6A | 8 | - |
| intron-exon | LOC105379393 | 8 | - | KAT6A | 8 | - |
| intron-exon | LOC105379393 | 8 | - | KAT6A | 8 | - |
| intron-exon | LOC105379412 | 4 | - | ELF2 | 4 | - |
| exon-intron | LOC105379461 | 16 | + | ACSM1 | 16 | + |
| exon-exon | LOC105379461 | 16 | + | ACSM3 | 16 | + |
| exon-intron | LOC105379484 | 21 | + | FP565260.4 | 21 | + |
| exon-intron | LOC105379506 | 21 | - | FP236383.3 | 21 | - |
| exon-intron | LOC105379507 | 21 | - | MAML3 | 4 | + |
| exon-exon | LOC105379518 | 22 | + | FAM230H | 22 | - |
| exon-exon | LOC105379518 | 22 | + | FAM230J | 22 | - |
| exon-exon | LOC105379574 | 1 | - | DAP3 | 1 | + |
| exon-intron | LOC105379640 | 5 | - | MARCHF11 | 5 | - |
| intron-exon | LOC105379641 | 6 | + | OR2H1 | 6 | + |
| intron-exon | LOC106014249 | 11 | + | RCN1 | 11 | + |
| intron-exon | LOC106014249 | 11 | + | RCN1 | 11 | + |
| intron-exon | LOC106096416 | 12 | + | KRT18 | 12 | + |
| intron-exon | LOC106099062 | 11 | - | HBB | 11 | - |
| intron-exon | LOC106099062 | 11 | - | HBB | 11 | - |
| intron-exon | LOC106099062 | 11 | - | HBB | 11 | - |
| intron-exon | LOC106099062 | 11 | - | HBB | 11 | - |
| intron-exon | LOC106099062 | 11 | - | HBB | 11 | - |
| intron-exon | LOC106099062 | 11 | - | HBB | 11 | - |
| intron-exon | LOC106099062 | 11 | - | HBB | 11 | - |
| intron-exon | LOC106099064 | 11 | - | HBG1 | 11 | - |
| intron-exon | LOC106099065 | 11 | + | OR51B5 | 11 | + |
| intron-exon | LOC106099065 | 11 | - | HBG2 | 11 | - |
| intron-exon | LOC106099065 | 11 | - | HBG2 | 11 | - |
| intron-exon | LOC106099065 | 11 | - | HBG2 | 11 | - |
| intron-exon | LOC106099065 | 11 | - | HBG1 | 11 | - |
| intron-exon | LOC106099065 | 11 | - | HBG1 | 11 | - |
| intron-exon | LOC106128906 | 19 | + | KLK2 | 19 | + |
| intron-exon | LOC106128906 | 19 | + | KLK2 | 19 | + |
| intron-exon | LOC106146144 | X | - | MTCP1 | X | - |
| intron-exon | LOC106146144 | X | - | MTCP1 | X | - |
| intron-exon | LOC106736480 | 15 | + | ARHGAP11B | 15 | + |
| intron-exon | LOC106736480 | 15 | + | ARHGAP11B | 15 | + |
| intron-exon | LOC106799848 | 14 | + | VIM | 10 | + |
| intron-exon | LOC106799848 | 14 | + | ATG9B | 7 | - |
| intron-exon | LOC106903146 | 8 | + | MCM4 | 8 | + |
| intron-exon | LOC107057645 | 7 | - | SLC25A40 | 7 | - |
| intron-exon | LOC107057645 | 7 | - | SLC25A40 | 7 | - |
| intron-exon | LOC107057645 | 7 | - | SLC25A40 | 7 | - |
| intron-exon | LOC107197952 | 7 | + | HOXA10-AS | 7 | + |
| intron-exon | LOC107372315 | 14 | - | OSGEP | 14 | - |
| intron-exon | LOC107372315 | 14 | - | OSGEP | 14 | - |
| intron-exon | LOC107648863 | 6 | - | HLA-DOA | 6 | - |
| intron-exon | LOC107648863 | 6 | - | HLA-DOA | 6 | - |
| intron-exon | LOC107648863 | 6 | - | HLA-DOA | 6 | - |
| intron-exon | LOC107648863 | 6 | - | HLA-DOA | 6 | - |
| intron-exon | LOC107648863 | 6 | - | HLA-DOA | 6 | - |
| intron-exon | LOC107648863 | 6 | - | HLA-DOA | 6 | - |
| intron-exon | LOC107648863 | 6 | - | HLA-DOA | 6 | - |
| intron-exon | LOC107882126 | 14 | - | TGM1 | 14 | - |
| intron-exon | LOC107882126 | 14 | - | TGM1 | 14 | - |
| intron-exon | LOC107882126 | 14 | - | TGM1 | 14 | - |
| intron-exon | LOC107882126 | 14 | - | TGM1 | 14 | - |
| intron-exon | LOC107882126 | 14 | - | TGM1 | 14 | - |
| intron-exon | LOC107882126 | 14 | - | TGM1 | 14 | - |
| intron-exon | LOC107963950 | 5 | + | GHR | 5 | + |
| intron-exon | LOC107982234 | 11 | - | WT1 | 11 | - |
| intron-exon | LOC107983959 | X | - | USP26 | X | - |
| intron-exon | LOC107983959 | X | - | USP26 | X | - |
| exon-exon | LOC107983979 | 4 | - | LINC01061 | 4 | - |
| exon-exon | LOC107983979 | 4 | - | LINC01061 | 4 | - |
| intron-exon | LOC107983981 | 15 | - | EEF1A1P5 | 9 | - |
| exon-intron | LOC107983989 | 10 | - | LINC02645 | 10 | - |
| intron-exon | LOC107983996 | 17 | - | TANC2 | 17 | - |
| exon-exon | LOC107983998 | 19 | + | ZNF581 | 19 | + |
| exon-exon | LOC107983998 | 19 | + | ZNF580 | 19 | + |
| exon-exon | LOC107984005 | 8 | - | GRHL2 | 8 | - |
| exon-exon | LOC107984019 | 11 | + | ZNF215 | 11 | + |
| exon-exon | LOC107984019 | 11 | + | ZNF215 | 11 | + |
| exon-exon | LOC107984019 | 11 | + | ZNF215 | 11 | + |
| exon-intron | LOC107984037 | 22 | + | AC138776.1 | 22 | + |
| exon-exon | LOC107984037 | 22 | + | LOC101928041 | 22 | + |
| intron-exon | LOC107984063 | 2 | + | SLC1A4 | 2 | + |
| intron-exon | LOC107984063 | 2 | + | SLC1A4 | 2 | + |
| intron-exon | LOC107984079 | 3 | - | ACOX2 | 3 | - |
| intron-exon | LOC107984097 | 8 | - | LOC105375795 | 8 | - |
| exon-exon | LOC107984109 | 1 | + | PFKFB2 | 1 | + |
| exon-exon | LOC107984109 | 1 | + | YOD1 | 1 | + |
| exon-exon | LOC107984109 | 1 | + | YOD1 | 1 | + |
| intron-exon | LOC107984214 | 10 | - | MLLT10 | 10 | - |
| intron-exon | LOC107984215 | 10 | - | ARMC3 | 10 | - |
| exon-exon | LOC107984227 | 10 | - | FAM21FP | 10 | - |
| intron-exon | LOC107984242 | 10 | - | COL13A1 | 10 | - |
| intron-exon | LOC107984242 | 10 | - | COL13A1 | 10 | - |
| intron-exon | LOC107984242 | 10 | - | COL13A1 | 10 | - |
| intron-exon | LOC107984242 | 10 | - | COL13A1 | 10 | - |
| intron-exon | LOC107984242 | 10 | - | COL13A1 | 10 | - |
| intron-exon | LOC107984242 | 10 | - | COL13A1 | 10 | - |
| intron-exon | LOC107984242 | 10 | - | COL13A1 | 10 | - |
| intron-exon | LOC107984242 | 10 | - | COL13A1 | 10 | - |
| intron-exon | LOC107984242 | 10 | - | COL13A1 | 10 | - |
| intron-exon | LOC107984244 | 10 | - | VCL | 10 | - |
| intron-exon | LOC107984244 | 10 | - | VCL | 10 | - |
| exon-exon | LOC107984251 | 10 | - | LIPA | 10 | - |
| exon-intron | LOC107984251 | 10 | - | LIPA | 10 | - |
| exon-exon | LOC107984251 | 10 | - | LIPA | 10 | - |
| intron-exon | LOC107984265 | 10 | - | BORCS7-ASMT | 10 | - |
| intron-exon | LOC107984265 | 10 | - | BORCS7-ASMT | 10 | - |
| exon-exon | LOC107984273 | 10 | - | GFRA1 | 10 | - |
| exon-exon | LOC107984273 | 10 | - | GFRA1 | 10 | - |
| exon-intron | LOC107984284 | 10 | - | LOC105378575 | 10 | - |
| intron-exon | LOC107984340 | 11 | - | RAB1B | 11 | - |
| intron-exon | LOC107984343 | 11 | + | GAL | 11 | + |
| exon-exon | LOC107984347 | 11 | - | PPFIA1 | 11 | - |
| exon-exon | LOC107984347 | 11 | - | PPFIA1 | 11 | - |
| exon-exon | LOC107984347 | 11 | - | PPFIA1 | 11 | - |
| exon-exon | LOC107984347 | 11 | - | PPFIA1 | 11 | - |
| exon-exon | LOC107984347 | 11 | - | PPFIA1 | 11 | - |
| exon-exon | LOC107984347 | 11 | - | PPFIA1 | 11 | - |
| exon-exon | LOC107984347 | 11 | - | PPFIA1 | 11 | - |
| exon-exon | LOC107984347 | 11 | - | PPFIA1 | 11 | - |
| exon-exon | LOC107984355 | 11 | + | ANO1 | 11 | + |
| intron-exon | LOC107984363 | 11 | + | TYR | 11 | + |
| exon-exon | LOC107984397 | 11 | + | C2CD2L | 11 | + |
| exon-exon | LOC107984397 | 11 | - | DPAGT1 | 11 | - |
| intron-exon | LOC107984418 | 11 | - | NAV2 | 11 | - |
| exon-exon | LOC107984421 | 11 | - | LOC105369380 | 11 | - |
| exon-exon | LOC107984421 | 11 | - | LOC105369380 | 11 | - |
| exon-intron | LOC107984437 | 12 | - | LOC105370000 | 12 | - |
| exon-intron | LOC107984450 | 12 | - | LOC107984449 | 12 | - |
| intron-exon | LOC107984461 | 12 | + | REP15 | 12 | + |
| intron-exon | LOC107984461 | 12 | - | PPFIBP1 | 12 | - |
| intron-exon | LOC107984461 | 12 | - | PPFIBP1 | 12 | - |
| exon-intron | LOC107984489 | 12 | + | OVOS | 12 | + |
| exon-intron | LOC107984516 | 12 | + | RP11-114G22.1 | 12 | + |
| intron-exon | LOC107984530 | 12 | - | ZFC3H1 | 12 | - |
| intron-exon | LOC107984542 | 12 | - | C12orf50 | 12 | - |
| intron-exon | LOC107984545 | 12 | - | LOC105369917 | 12 | - |
| exon-exon | LOC107984576 | 13 | + | NRAD1 | 13 | + |
| exon-exon | LOC107984578 | 13 | - | LCP1 | 13 | - |
| exon-exon | LOC107984578 | 13 | - | LCP1 | 13 | - |
| intron-exon | LOC107984578 | 13 | - | LCP1 | 13 | - |
| intron-exon | LOC107984661 | 14 | - | DYNC1H1 | 14 | - |
| intron-exon | LOC107984661 | 14 | - | DYNC1H1 | 14 | - |
| intron-exon | LOC107984661 | 14 | - | DYNC1H1 | 14 | - |
| intron-exon | LOC107984661 | 14 | - | DYNC1H1 | 14 | - |
| intron-exon | LOC107984667 | 14 | - | GZMB | 14 | - |
| intron-exon | LOC107984667 | 14 | - | GZMB | 14 | - |
| intron-exon | LOC107984667 | 14 | - | GZMB | 14 | - |
| intron-exon | LOC107984667 | 14 | - | GZMB | 14 | - |
| intron-exon | LOC107984667 | 14 | - | GZMB | 14 | - |
| intron-exon | LOC107984741 | 15 | - | USP8 | 15 | - |
| intron-exon | LOC107984741 | 15 | - | USP8 | 15 | - |
| intron-exon | LOC107984741 | 15 | - | USP8 | 15 | - |
| intron-exon | LOC107984749 | 15 | - | CEMIP | 15 | - |
| exon-intron | LOC107984772 | 15 | + | C15orf39 | 15 | + |
| exon-exon | LOC107984777 | 15 | - | MIR9-3HG | 15 | - |
| intron-exon | LOC107984793 | 15 | - | LOC105370730 | 15 | - |
| intron-exon | LOC107984814 | 16 | - | LINC01572 | 16 | - |
| intron-exon | LOC107984827 | 16 | + | GLG1 | 16 | + |
| exon-exon | LOC107984831 | 16 | + | ACSM3 | 16 | + |
| intron-exon | LOC107984837 | 16 | - | KIF22 | 16 | - |
| intron-exon | LOC107984837 | 16 | - | KIF22 | 16 | - |
| intron-exon | LOC107984837 | 16 | - | KIF22 | 16 | - |
| exon-exon | LOC107984839 | 16 | - | ECI1 | 16 | - |
| intron-exon | LOC107984839 | 16 | - | ECI1 | 16 | - |
| exon-intron | LOC107984841 | 1 | + | LOC101928626 | 1 | + |
| exon-exon | LOC107984841 | 1 | - | LOC100133331 | 1 | - |
| intron-exon | LOC107984841 | 1 | - | LOC100133331 | 1 | - |
| intron-exon | LOC107984852 | 16 | + | KATNB1 | 16 | + |
| intron-exon | LOC107984852 | 16 | + | KATNB1 | 16 | + |
| exon-exon | LOC107984858 | 16 | - | CENPN | 16 | - |
| exon-exon | LOC107984858 | 16 | - | CENPN | 16 | - |
| exon-exon | LOC107984858 | 16 | - | CENPN | 16 | - |
| exon-exon | LOC107984858 | 16 | - | CENPN | 16 | - |
| exon-intron | LOC107984858 | 16 | - | CENPN | 16 | - |
| intron-exon | LOC107984858 | 16 | - | CENPN | 16 | - |
| intron-exon | LOC107984867 | 16 | - | SLC38A7 | 16 | - |
| intron-exon | LOC107984878 | 16 | + | VAT1L | 16 | + |
| exon-intron | LOC107984878 | 16 | - | NUDT7 | 16 | - |
| intron-exon | LOC107984913 | 1 | + | FGA | 4 | + |
| intron-exon | LOC107984928 | 1 | + | CNR2 | 1 | + |
| intron-exon | LOC107984931 | 1 | + | MYOM3-AS1 | 1 | + |
| intron-exon | LOC107984948 | 1 | - | SLC6A9 | 1 | - |
| intron-exon | LOC107984948 | 1 | - | SLC6A9 | 1 | - |
| intron-exon | LOC107984948 | 1 | - | SLC6A9 | 1 | - |
| intron-exon | LOC107984948 | 1 | - | SLC6A9 | 1 | - |
| intron-exon | LOC107984948 | 1 | - | SLC6A9 | 1 | - |
| intron-exon | LOC107984948 | 1 | - | SLC6A9 | 1 | - |
| intron-exon | LOC107984948 | 1 | - | SLC6A9 | 1 | - |
| intron-exon | LOC107984948 | 1 | - | SLC6A9 | 1 | - |
| intron-exon | LOC107984948 | 1 | - | SLC6A9 | 1 | - |
| intron-exon | LOC107984948 | 1 | - | SLC6A9 | 1 | - |
| intron-exon | LOC107984965 | 1 | - | PATJ | 1 | - |
| intron-exon | LOC107984965 | 1 | - | PATJ | 1 | - |
| intron-exon | LOC107984969 | 17 | - | TMEM11 | 17 | - |
| intron-exon | LOC107984997 | 1 | - | GIPC2 | 1 | - |
| exon-exon | LOC107985007 | 17 | + | PSME3 | 17 | + |
| intron-exon | LOC107985017 | 17 | + | PIMREG | 17 | + |
| intron-exon | LOC107985023 | 17 | - | TSEN54 | 17 | - |
| intron-exon | LOC107985023 | 17 | - | TSEN54 | 17 | - |
| intron-exon | LOC107985023 | 17 | - | TSEN54 | 17 | - |
| intron-exon | LOC107985023 | 17 | - | TSEN54 | 17 | - |
| intron-exon | LOC107985023 | 17 | - | TSEN54 | 17 | - |
| intron-exon | LOC107985023 | 17 | - | TSEN54 | 17 | - |
| intron-exon | LOC107985023 | 17 | - | TSEN54 | 17 | - |
| intron-exon | LOC107985023 | 17 | - | TSEN54 | 17 | - |
| intron-exon | LOC107985023 | 17 | - | TSEN54 | 17 | - |
| exon-intron | LOC107985023 | 17 | - | TSEN54 | 17 | - |
| exon-intron | LOC107985037 | 1 | - | LINC01362 | 1 | - |
| exon-exon | LOC107985040 | 17 | - | FMNL1 | 17 | - |
| exon-exon | LOC107985040 | 17 | - | FMNL1 | 17 | - |
| exon-exon | LOC107985106 | 1 | - | LINC00623 | 1 | - |
| intron-exon | LOC107985106 | 1 | - | LOC100996720 | 1 | - |
| intron-exon | LOC107985213 | 1 | + | OR10R2 | 1 | + |
| exon-exon | LOC107985213 | 1 | - | LOC107985212 | 1 | - |
| exon-exon | LOC107985213 | 1 | - | LOC107985212 | 1 | - |
| exon-exon | LOC107985213 | 1 | - | LOC107985212 | 1 | - |
| exon-exon | LOC107985213 | 1 | - | LOC107985212 | 1 | - |
| exon-exon | LOC107985213 | 1 | - | LOC107985212 | 1 | - |
| intron-exon | LOC107985213 | 1 | - | LOC107985212 | 1 | - |
| intron-exon | LOC107985216 | 1 | + | CFAP45 | 1 | + |
| intron-exon | LOC107985216 | 1 | + | CFAP45 | 1 | + |
| intron-exon | LOC107985219 | 1 | + | NBPF11 | 1 | + |
| exon-exon | LOC107985219 | 1 | - | PEX19 | 1 | - |
| exon-exon | LOC107985236 | 1 | - | C1orf21 | 1 | - |
| exon-exon | LOC107985236 | 1 | - | C1orf21 | 1 | - |
| intron-exon | LOC107985251 | 1 | - | C4BPA | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| intron-exon | LOC107985253 | 1 | - | CD34 | 1 | - |
| exon-exon | LOC107985263 | 1 | - | SMYD2 | 1 | - |
| exon-intron | LOC107985263 | 1 | - | SMYD2 | 1 | - |
| exon-exon | LOC107985263 | 1 | - | SMYD2 | 1 | - |
| exon-exon | LOC107985263 | 1 | - | SMYD2 | 1 | - |
| exon-exon | LOC107985263 | 1 | - | SMYD2 | 1 | - |
| exon-exon | LOC107985263 | 1 | - | SMYD2 | 1 | - |
| exon-exon | LOC107985263 | 1 | - | SMYD2 | 1 | - |
| exon-intron | LOC107985263 | 1 | - | SMYD2 | 1 | - |
| exon-exon | LOC107985263 | 1 | - | SMYD2 | 1 | - |
| exon-exon | LOC107985263 | 1 | - | SMYD2 | 1 | - |
| exon-exon | LOC107985278 | 19 | - | BTBD2 | 19 | - |
| exon-intron | LOC107985278 | 19 | - | BTBD2 | 19 | - |
| exon-exon | LOC107985278 | 19 | - | BTBD2 | 19 | - |
| exon-exon | LOC107985278 | 19 | - | BTBD2 | 19 | - |
| intron-exon | LOC107985291 | 19 | - | ACTN4 | 19 | - |
| intron-exon | LOC107985291 | 19 | - | ACTN4 | 19 | - |
| intron-exon | LOC107985291 | 19 | - | ACTN4 | 19 | - |
| exon-exon | LOC107985303 | 19 | + | CIRBP | 19 | + |
| exon-intron | LOC107985303 | 19 | + | LOC105372236 | 19 | + |
| intron-exon | LOC107985305 | 19 | + | CEACAM19 | 19 | + |
| intron-exon | LOC107985305 | 19 | + | CEACAM19 | 19 | + |
| intron-exon | LOC107985305 | 19 | + | KRT19P1 | 6 | - |
| intron-exon | LOC107985305 | 19 | - | IGSF23 | 19 | - |
| intron-exon | LOC107985305 | 19 | - | CELSR2 | 1 | - |
| intron-exon | LOC107985311 | 19 | - | TSHZ3 | 19 | - |
| intron-exon | LOC107985314 | 19 | + | VASP | 19 | + |
| intron-exon | LOC107985314 | 19 | - | PPM1N | 19 | - |
| intron-exon | LOC107985315 | 19 | - | VASP | 19 | - |
| intron-exon | LOC107985317 | 19 | + | APLP1 | 19 | + |
| intron-exon | LOC107985317 | 19 | - | KIRREL2 | 19 | - |
| exon-intron | LOC107985324 | 19 | - | LOC105372328 | 19 | - |
| exon-intron | LOC107985325 | 19 | + | RDH13 | 19 | + |
| intron-exon | LOC107985335 | 19 | + | LINC00906 | 19 | + |
| exon-exon | LOC107985349 | 19 | + | PSG5 | 19 | + |
| exon-exon | LOC107985355 | 1 | + | LOC102723777 | 17 | - |
| exon-exon | LOC107985403 | 20 | - | TM9SF4 | 20 | - |
| exon-exon | LOC107985403 | 20 | - | TM9SF4 | 20 | - |
| exon-exon | LOC107985403 | 20 | - | TM9SF4 | 20 | - |
| exon-exon | LOC107985403 | 20 | - | TM9SF4 | 20 | - |
| exon-intron | LOC107985404 | 20 | - | SYS1-DBNDD2 | 20 | - |
| exon-exon | LOC107985405 | 20 | + | PIGT | 20 | + |
| exon-exon | LOC107985416 | 20 | - | HM13 | 20 | - |
| exon-exon | LOC107985423 | 20 | - | SRXN1 | 20 | - |
| intron-exon | LOC107985481 | 21 | - | SON | 21 | - |
| exon-exon | LOC107985481 | 21 | - | SON | 21 | - |
| exon-exon | LOC107985504 | 21 | - | PDE9A | 21 | - |
| exon-exon | LOC107985541 | 22 | - | RFPL1S | 22 | - |
| exon-exon | LOC107985577 | 22 | + | MMP11 | 22 | + |
| exon-exon | LOC107985584 | 22 | + | BCRP2 | 22 | + |
| intron-exon | LOC107985641 | X | + | LOC642943 | 9 | - |
| exon-exon | LOC107985685 | X | + | FRMPD4 | X | + |
| intron-exon | LOC107985697 | Y | + | VPS53 | 17 | - |
| intron-exon | LOC107985706 | Y | + | PNMA2 | 8 | - |
| intron-exon | LOC107985717 | X | + | LOC105373188 | X | + |
| exon-exon | LOC107985733 | 1 | - | RPL22 | 1 | - |
| exon-exon | LOC107985733 | 1 | - | RPL22 | 1 | - |
| intron-exon | LOC107985733 | 1 | - | RPL22 | 1 | - |
| intron-exon | LOC107985733 | 1 | - | RPL22 | 1 | - |
| exon-exon | LOC107985733 | 1 | - | RPL22 | 1 | - |
| intron-exon | LOC107985736 | 1 | - | ANXA1 | 9 | + |
| intron-exon | LOC107985736 | 1 | - | ACTB | 7 | - |
| intron-exon | LOC107985736 | 1 | - | ACTB | 7 | - |
| intron-exon | LOC107985736 | 1 | - | SRCAP | 16 | + |
| exon-intron | LOC107985861 | 2 | - | GALNT14 | 2 | - |
| exon-exon | LOC107985861 | 2 | - | GALNT14 | 2 | - |
| intron-exon | LOC107985862 | 2 | - | SRD5A2 | 2 | - |
| exon-exon | LOC107985873 | 2 | + | COX7A2L | 2 | + |
| intron-exon | LOC107985873 | 2 | - | EML4 | 2 | - |
| intron-exon | LOC107985873 | 2 | - | EML4 | 2 | - |
| intron-exon | LOC107985873 | 2 | - | EML4 | 2 | - |
| intron-exon | LOC107985873 | 2 | - | EML4 | 2 | - |
| exon-exon | LOC107985878 | 2 | - | CAMKMT | 2 | - |
| intron-exon | LOC107985892 | 2 | - | PPP3R1 | 2 | - |
| intron-exon | LOC107985892 | 2 | - | PPP3R1 | 2 | - |
| exon-exon | LOC107985902 | 2 | + | CTNNA2 | 2 | + |
| intron-exon | LOC107985923 | 2 | + | LOC285453 | 4 | + |
| exon-exon | LOC107985933 | 2 | - | LOC105373559 | 2 | - |
| exon-intron | LOC107985946 | 2 | + | UBXN4 | 2 | + |
| exon-exon | LOC107985946 | 2 | + | UBXN4 | 2 | + |
| exon-exon | LOC107985946 | 2 | + | UBXN4 | 2 | + |
| exon-exon | LOC107985946 | 2 | + | UBXN4 | 2 | + |
| exon-exon | LOC107985946 | 2 | + | UBXN4 | 2 | + |
| exon-exon | LOC107985946 | 2 | + | UBXN4 | 2 | + |
| exon-exon | LOC107985946 | 2 | + | UBXN4 | 2 | + |
| exon-exon | LOC107985946 | 2 | + | UBXN4 | 2 | + |
| exon-exon | LOC107985946 | 2 | + | UBXN4 | 2 | + |
| exon-exon | LOC107985946 | 2 | + | UBXN4 | 2 | + |
| exon-exon | LOC107985946 | 2 | + | UBXN4 | 2 | + |
| intron-exon | LOC107985960 | 2 | + | LAPTM4B | 8 | - |
| intron-exon | LOC107985995 | 2 | - | SLC16A14 | 2 | - |
| intron-exon | LOC107985995 | 2 | - | SLC16A14 | 2 | - |
| intron-exon | LOC107985995 | 2 | - | SLC16A14 | 2 | - |
| intron-exon | LOC107985995 | 2 | - | SLC16A14 | 2 | - |
| intron-exon | LOC107985995 | 2 | - | SLC16A14 | 2 | - |
| intron-exon | LOC107986022 | 3 | - | PTGS2 | 1 | - |
| exon-exon | LOC107986022 | 3 | - | LSAMP | 3 | - |
| exon-exon | LOC107986022 | 3 | - | LSAMP | 3 | - |
| exon-exon | LOC107986022 | 3 | - | LSAMP | 3 | - |
| exon-exon | LOC107986022 | 3 | - | LSAMP | 3 | - |
| exon-exon | LOC107986022 | 3 | - | LSAMP | 3 | - |
| exon-exon | LOC107986022 | 3 | - | LSAMP | 3 | - |
| exon-exon | LOC107986022 | 3 | - | LSAMP | 3 | - |
| exon-exon | LOC107986022 | 3 | - | LSAMP | 3 | - |
| exon-exon | LOC107986022 | 3 | - | LSAMP | 3 | - |
| exon-exon | LOC107986022 | 3 | - | LSAMP | 3 | - |
| exon-exon | LOC107986022 | 3 | - | LSAMP | 3 | - |
| exon-exon | LOC107986022 | 3 | - | LSAMP | 3 | - |
| exon-exon | LOC107986022 | 3 | - | LSAMP | 3 | - |
| exon-exon | LOC107986022 | 3 | - | LSAMP | 3 | - |
| exon-intron | LOC107986022 | 3 | - | LSAMP | 3 | - |
| exon-exon | LOC107986086 | 3 | - | WDR82 | 3 | - |
| exon-exon | LOC107986086 | 3 | - | WDR82 | 3 | - |
| exon-exon | LOC107986091 | 3 | - | DNASE1L3 | 3 | - |
| exon-exon | LOC107986091 | 3 | - | DNASE1L3 | 3 | - |
| exon-intron | LOC107986091 | 3 | - | DNASE1L3 | 3 | - |
| exon-exon | LOC107986091 | 3 | - | DNASE1L3 | 3 | - |
| intron-exon | LOC107986114 | 3 | - | NEPRO | 3 | - |
| exon-exon | LOC107986114 | 3 | - | NEPRO | 3 | - |
| intron-exon | LOC107986114 | 3 | - | NEPRO | 3 | - |
| intron-exon | LOC107986114 | 3 | - | NEPRO | 3 | - |
| intron-exon | LOC107986114 | 3 | - | NEPRO | 3 | - |
| intron-exon | LOC107986114 | 3 | - | NEPRO | 3 | - |
| intron-exon | LOC107986114 | 3 | - | NEPRO | 3 | - |
| exon-intron | LOC107986170 | 3 | + | CLDN16 | 3 | + |
| exon-intron | LOC107986170 | 3 | + | CLDN16 | 3 | + |
| exon-exon | LOC107986211 | 4 | - | PCGF3 | 4 | - |
| exon-exon | LOC107986215 | 4 | - | RASGEF1B | 4 | - |
| exon-exon | LOC107986215 | 4 | - | RASGEF1B | 4 | - |
| exon-exon | LOC107986215 | 4 | - | RASGEF1B | 4 | - |
| exon-exon | LOC107986215 | 4 | - | RASGEF1B | 4 | - |
| exon-exon | LOC107986215 | 4 | - | RASGEF1B | 4 | - |
| exon-intron | LOC107986250 | 4 | + | LOC644006 | 1 | + |
| exon-exon | LOC107986257 | 4 | - | WFS1 | 4 | - |
| exon-exon | LOC107986261 | 4 | - | PROM1 | 4 | - |
| exon-intron | LOC107986298 | 4 | - | CYP2U1-AS1 | 4 | - |
| exon-intron | LOC107986298 | 4 | - | CYP2U1-AS1 | 4 | - |
| exon-intron | LOC107986298 | 4 | - | CYP2U1-AS1 | 4 | - |
| exon-intron | LOC107986298 | 4 | - | CYP2U1-AS1 | 4 | - |
| exon-intron | LOC107986298 | 4 | - | CYP2U1-AS1 | 4 | - |
| intron-exon | LOC107986317 | 4 | - | GYPA | 4 | - |
| intron-exon | LOC107986356 | 5 | + | GUSBP16 | 5 | + |
| intron-exon | LOC107986356 | 5 | + | ZNF788P | 19 | + |
| intron-exon | LOC107986432 | 5 | - | ADGRV1 | 5 | - |
| intron-exon | LOC107986445 | 5 | + | LOC100505841 | 5 | + |
| intron-exon | LOC107986475 | 5 | + | GABRP | 5 | + |
| exon-intron | LOC107986520 | 6 | - | TRAF3IP2-AS1 | 6 | - |
| exon-exon | LOC107986531 | 6 | + | CMTR1 | 6 | + |
| intron-exon | LOC107986560 | 6 | + | EEF1A1 | 6 | - |
| exon-intron | LOC107986589 | 6 | + | HLA-DQA1 | 6 | + |
| exon-exon | LOC107986589 | 6 | + | HLA-DQA1 | 6 | + |
| intron-exon | LOC107986598 | 6 | + | LINC01512 | 6 | + |
| intron-exon | LOC107986638 | 6 | - | HS3ST5 | 6 | - |
| exon-exon | LOC107986655 | 6 | - | HIVEP2 | 6 | - |
| exon-exon | LOC107986663 | 6 | + | SNX9 | 6 | + |
| exon-exon | LOC107986694 | 7 | - | CCZ1 | 7 | - |
| exon-exon | LOC107986696 | 7 | + | CCZ1 | 7 | - |
| intron-exon | LOC107986715 | 7 | + | GTPBP10 | 7 | + |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| exon-intron | LOC107986762 | 7 | - | LINC01234 | 12 | + |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| exon-exon | LOC107986762 | 7 | - | FSCN1 | 7 | - |
| intron-exon | LOC107986769 | 7 | + | SCIN | 7 | + |
| intron-exon | LOC107986777 | 7 | + | NPY | 7 | + |
| exon-intron | LOC107986816 | 7 | + | AC002069.2 | 7 | + |
| exon-exon | LOC107986850 | 7 | + | CALD1 | 7 | + |
| exon-intron | LOC107986863 | 7 | - | CNPY1 | 7 | - |
| exon-exon | LOC107986876 | 8 | - | C8orf58 | 8 | - |
| exon-exon | LOC107986876 | 8 | - | C8orf58 | 8 | - |
| exon-intron | LOC107986897 | 8 | - | LINC02845 | 8 | - |
| exon-exon | LOC107986921 | 8 | + | LPL | 8 | + |
| intron-exon | LOC107986986 | 8 | - | ZNF251 | 8 | - |
| intron-exon | LOC107987043 | 9 | - | SMARCA2 | 9 | - |
| intron-exon | LOC107987046 | 9 | - | IL33 | 9 | - |
| exon-intron | LOC107987063 | 9 | + | AL162231.2 | 9 | + |
| intron-exon | LOC107987065 | 9 | + | LOC105376040 | 9 | - |
| intron-exon | LOC107987075 | 9 | - | FAM27E3 | 9 | - |
| intron-exon | LOC107987075 | 9 | - | FAM27E3 | 9 | - |
| exon-exon | LOC107987077 | 9 | + | LOC440896 | 9 | - |
| exon-exon | LOC107987121 | 9 | - | TEX53 | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| intron-exon | LOC107987132 | 9 | - | SH2D3C | 9 | - |
| exon-exon | LOC107987135 | 9 | - | PRRC2B | 9 | - |
| exon-intron | LOC107987159 | 11 | - | LOC101927708 | 11 | - |
| exon-exon | LOC107987169 | 12 | - | EP400P1 | 12 | - |
| exon-exon | LOC107987206 | 14 | + | LOC105378179 | 14 | + |
| exon-intron | LOC107987206 | 14 | + | NFIA | 1 | - |
| exon-exon | LOC107987223 | 15 | - | C15orf48 | 15 | - |
| exon-exon | LOC107987233 | 16 | + | PIGQ | 16 | + |
| exon-exon | LOC107987272 | 19 | + | CENPBD1P1 | 19 | + |
| exon-intron | LOC107987323 | 22 | + | LOC105379516 | 22 | + |
| intron-exon | LOC108178986 | 12 | + | LOC105369617 | 12 | + |
| intron-exon | LOC108178991 | 20 | + | PLCB1 | 20 | + |
| intron-exon | LOC108281110 | 2 | - | PAX8 | 2 | - |
| intron-exon | LOC108491836 | 9 | - | NR5A1 | 9 | - |
| intron-exon | LOC108491836 | 9 | - | NR5A1 | 9 | - |
| intron-exon | LOC108491836 | 9 | - | NR5A1 | 9 | - |
| intron-exon | LOC108491836 | 9 | - | NR5A1 | 9 | - |
| intron-exon | LOC108491836 | 9 | - | NR5A1 | 9 | - |
| intron-exon | LOC108491836 | 9 | - | NR5A1 | 9 | - |
| intron-exon | LOC108491836 | 9 | - | NR5A1 | 9 | - |
| intron-exon | LOC108491836 | 9 | - | NR5A1 | 9 | - |
| intron-exon | LOC108491836 | 9 | - | NR5A1 | 9 | - |
| exon-exon | LOC108783654 | 17 | + | HSD17B1 | 17 | + |
| exon-exon | LOC108783654 | 17 | + | HSD17B1 | 17 | + |
| exon-intron | LOC108783654 | 17 | - | LOC111240475 | 17 | - |
| intron-exon | LOC108863620 | 8 | - | STAR | 8 | - |
| intron-exon | LOC108863620 | 8 | - | STAR | 8 | - |
| intron-exon | LOC108863620 | 8 | - | STAR | 8 | - |
| intron-exon | LOC108942766 | 12 | + | NANOG | 12 | + |
| intron-exon | LOC108964933 | 15 | - | CYP11A1 | 15 | - |
| intron-exon | LOC109245078 | 11 | - | FGF19 | 11 | - |
| intron-exon | LOC109433677 | 14 | - | BMP4 | 14 | - |
| intron-exon | LOC109951029 | 11 | - | HBD | 11 | - |
| intron-exon | LOC110120717 | 9 | - | AMIGO2 | 12 | - |
| intron-exon | LOC110121221 | 1 | - | LOC105371453 | 1 | - |
| intron-exon | LOC110121221 | 1 | - | LOC105371453 | 1 | - |
| intron-exon | LOC110121454 | 20 | - | RIPOR3 | 20 | - |
| intron-exon | LOC110283621 | 4 | + | SPP1 | 4 | + |
| intron-exon | LOC110351180 | 4 | + | IBSP | 4 | + |
| intron-exon | LOC110467515 | 15 | - | CYP1A1 | 15 | - |
| intron-exon | LOC110467515 | 15 | - | CYP1A1 | 15 | - |
| intron-exon | LOC110467515 | 15 | - | CYP1A1 | 15 | - |
| intron-exon | LOC110467515 | 15 | - | CYP1A1 | 15 | - |
| intron-exon | LOC110467515 | 15 | - | CYP1A1 | 15 | - |
| intron-exon | LOC110467515 | 15 | - | CYP1A1 | 15 | - |
| intron-exon | LOC110806262 | 17 | - | SLC6A4 | 17 | - |
| intron-exon | LOC110806262 | 17 | - | SLC6A4 | 17 | - |
| intron-exon | LOC110806262 | 17 | - | SLC6A4 | 17 | - |
| intron-exon | LOC110806262 | 17 | - | SLC6A4 | 17 | - |
| intron-exon | LOC110806262 | 17 | - | SLC6A4 | 17 | - |
| intron-exon | LOC111188164 | 4 | - | ADH1C | 4 | - |
| intron-exon | LOC111255645 | 8 | - | TNFRSF10A | 8 | - |
| intron-exon | LOC111255645 | 8 | - | TNFRSF10A | 8 | - |
| intron-exon | LOC111255645 | 8 | - | TNFRSF10A | 8 | - |
| intron-exon | LOC111255645 | 8 | - | TNFRSF10A | 8 | - |
| intron-exon | LOC111255645 | 8 | - | TNFRSF10A | 8 | - |
| intron-exon | LOC111255645 | 8 | - | TNFRSF10A | 8 | - |
| intron-exon | LOC111255645 | 8 | - | TNFRSF10A | 8 | - |
| intron-exon | LOC111255645 | 8 | - | TNFRSF10A | 8 | - |
| intron-exon | LOC111255645 | 8 | - | TNFRSF10A | 8 | - |
| intron-exon | LOC111255645 | 8 | - | TNFRSF10A | 8 | - |
| intron-exon | LOC111255645 | 8 | - | TNFRSF10A | 8 | - |
| intron-exon | LOC111258501 | 2 | + | MEIS1 | 2 | + |
| intron-exon | LOC111589215 | 17 | - | BRCA1 | 17 | - |
| intron-exon | LOC111589215 | 17 | - | BRCA1 | 17 | - |
| intron-exon | LOC111589215 | 17 | - | BRCA1 | 17 | - |
| intron-exon | LOC111589215 | 17 | - | BRCA1 | 17 | - |
| intron-exon | LOC111589215 | 17 | - | BRCA1 | 17 | - |
| intron-exon | LOC111589215 | 17 | - | BRCA1 | 17 | - |
| intron-exon | LOC111589215 | 17 | - | BRCA1 | 17 | - |
| intron-exon | LOC111589215 | 17 | - | BRCA1 | 17 | - |
| intron-exon | LOC111674463 | 7 | + | CFTR | 7 | + |
| intron-exon | LOC111828530 | 9 | - | PSMD5 | 9 | - |
| intron-exon | LOC111828530 | 9 | - | PSMD5 | 9 | - |
| intron-exon | LOC111828530 | 9 | - | PSMD5 | 9 | - |
| intron-exon | LOC111828530 | 9 | - | PSMD5 | 9 | - |
| intron-exon | LOC111828530 | 9 | - | PSMD5 | 9 | - |
| intron-exon | LOC111828530 | 9 | - | PSMD5 | 9 | - |
| intron-exon | LOC111828530 | 9 | - | PSMD5 | 9 | - |
| intron-exon | LOC111828530 | 9 | - | PSMD5 | 9 | - |
| intron-exon | LOC111875821 | 10 | - | STN1 | 10 | - |
| intron-exon | LOC111875822 | 10 | + | CFAP58 | 10 | + |
| intron-exon | LOC111875829 | 10 | - | EIF3A | 10 | - |
| intron-exon | LOC111875829 | 10 | - | EIF3A | 10 | - |
| intron-exon | LOC111875829 | 10 | - | EIF3A | 10 | - |
| intron-exon | LOC111982876 | 10 | - | MAT1A | 10 | - |
| intron-exon | LOC111982876 | 10 | - | MAT1A | 10 | - |
| intron-exon | LOC111982883 | 10 | - | LOC107984257 | 10 | - |
| intron-exon | LOC112067715 | 11 | - | UEVLD | 11 | - |
| intron-exon | LOC112067719 | 11 | - | NAP1L4 | 11 | - |
| intron-exon | LOC112267850 | 14 | - | CHMP4A | 14 | - |
| intron-exon | LOC112267850 | 14 | - | CHMP4A | 14 | - |
| intron-exon | LOC112267855 | 5 | - | APBB3 | 5 | - |
| exon-intron | LOC112267855 | 5 | - | AC116353.6 | 5 | - |
| exon-exon | LOC112267857 | 6 | + | SH3BGRL2 | 6 | + |
| exon-intron | LOC112267869 | 15 | + | AC048382.4 | 15 | + |
| exon-exon | LOC112267870 | 18 | + | ONECUT2 | 18 | + |
| intron-exon | LOC112267872 | 19 | + | ZNF253 | 19 | + |
| intron-exon | LOC112267872 | 19 | + | ZNF56 | 19 | + |
| intron-exon | LOC112267887 | 3 | - | SLC41A3 | 3 | - |
| intron-exon | LOC112267887 | 3 | - | SLC41A3 | 3 | - |
| intron-exon | LOC112267887 | 3 | - | SLC41A3 | 3 | - |
| intron-exon | LOC112267887 | 3 | - | SLC41A3 | 3 | - |
| intron-exon | LOC112267905 | 15 | - | SLC12A1 | 15 | - |
| intron-exon | LOC112267905 | 15 | - | SLC12A1 | 15 | - |
| intron-exon | LOC112267905 | 15 | - | SLC12A1 | 15 | - |
| exon-intron | LOC112267931 | 5 | - | DAB2 | 5 | - |
| exon-exon | LOC112267931 | 5 | - | DAB2 | 5 | - |
| exon-intron | LOC112267936 | 5 | - | LOC105369896 | 12 | + |
| exon-exon | LOC112267958 | 6 | - | KLC4 | 6 | - |
| exon-exon | LOC112267958 | 6 | - | KLC4 | 6 | - |
| exon-exon | LOC112267958 | 6 | - | KLC4 | 6 | - |
| exon-exon | LOC112267958 | 6 | - | KLC4 | 6 | - |
| exon-exon | LOC112267958 | 6 | - | KLC4 | 6 | - |
| exon-intron | LOC112267958 | 6 | - | KLC4 | 6 | - |
| intron-exon | LOC112267968 | 6 | - | TNPO1 | 5 | - |
| intron-exon | LOC112267985 | 7 | + | CLDN12 | 7 | + |
| exon-exon | LOC112268006 | 7 | - | TMEM248 | 7 | - |
| exon-exon | LOC112268006 | 7 | - | TMEM248 | 7 | - |
| exon-exon | LOC112268006 | 7 | - | TMEM248 | 7 | - |
| exon-exon | LOC112268006 | 7 | - | TMEM248 | 7 | - |
| exon-exon | LOC112268006 | 7 | - | TMEM248 | 7 | - |
| exon-exon | LOC112268006 | 7 | - | TMEM248 | 7 | - |
| exon-exon | LOC112268006 | 7 | - | TMEM248 | 7 | - |
| intron-exon | LOC112268015 | 8 | - | LOC101929709 | 8 | - |
| intron-exon | LOC112268015 | 8 | - | LOC101929709 | 8 | - |
| intron-exon | LOC112268015 | 8 | - | LOC101929709 | 8 | - |
| intron-exon | LOC112268015 | 8 | - | LOC101929709 | 8 | - |
| intron-exon | LOC112268015 | 8 | - | LOC101929709 | 8 | - |
| intron-exon | LOC112268015 | 8 | - | LOC101929709 | 8 | - |
| intron-exon | LOC112268015 | 8 | - | LOC101929709 | 8 | - |
| intron-exon | LOC112268015 | 8 | - | LOC101929709 | 8 | - |
| intron-exon | LOC112268015 | 8 | - | LOC101929709 | 8 | - |
| intron-exon | LOC112268024 | 8 | - | RBPMS | 8 | - |
| intron-exon | LOC112268024 | 8 | - | RBPMS | 8 | - |
| intron-exon | LOC112268024 | 8 | - | RBPMS | 8 | - |
| intron-exon | LOC112268024 | 8 | - | RBPMS | 8 | - |
| intron-exon | LOC112268024 | 8 | - | RBPMS | 8 | - |
| intron-exon | LOC112268024 | 8 | - | RBPMS | 8 | - |
| intron-exon | LOC112268024 | 8 | - | RBPMS | 8 | - |
| exon-intron | LOC112268030 | 8 | + | RAD21 | 8 | + |
| exon-exon | LOC112268041 | 9 | - | GLDC | 9 | - |
| exon-exon | LOC112268042 | 9 | - | DOCK8 | 9 | - |
| intron-exon | LOC112268049 | 9 | + | LOC105376161 | 9 | + |
| exon-exon | LOC112268052 | 9 | + | RAD23B | 9 | + |
| intron-exon | LOC112268056 | 9 | + | SLC2A8 | 9 | + |
| exon-intron | LOC112268056 | 9 | - | GARNL3 | 9 | - |
| exon-exon | LOC112268056 | 9 | - | GARNL3 | 9 | - |
| exon-exon | LOC112268058 | 10 | - | VTI1A | 10 | - |
| exon-exon | LOC112268072 | 11 | + | LOC105376547 | 11 | + |
| exon-exon | LOC112268072 | 11 | - | EIF4G2 | 11 | - |
| exon-exon | LOC112268072 | 11 | - | EIF4G2 | 11 | - |
| exon-intron | LOC112268072 | 11 | - | LOC101928053 | 11 | - |
| exon-exon | LOC112268089 | 12 | - | NCAPD2 | 12 | - |
| exon-exon | LOC112268089 | 12 | - | NCAPD2 | 12 | - |
| exon-exon | LOC112268089 | 12 | - | NCAPD2 | 12 | - |
| exon-exon | LOC112268089 | 12 | - | NCAPD2 | 12 | - |
| exon-exon | LOC112268089 | 12 | - | NCAPD2 | 12 | - |
| exon-exon | LOC112268089 | 12 | - | NCAPD2 | 12 | - |
| exon-exon | LOC112268089 | 12 | - | NCAPD2 | 12 | - |
| exon-exon | LOC112268089 | 12 | - | NCAPD2 | 12 | - |
| exon-exon | LOC112268089 | 12 | - | NCAPD2 | 12 | - |
| exon-exon | LOC112268089 | 12 | - | NCAPD2 | 12 | - |
| exon-exon | LOC112268089 | 12 | - | NCAPD2 | 12 | - |
| exon-exon | LOC112268089 | 12 | - | NCAPD2 | 12 | - |
| exon-exon | LOC112268089 | 12 | - | NCAPD2 | 12 | - |
| exon-exon | LOC112268089 | 12 | - | NCAPD2 | 12 | - |
| exon-exon | LOC112268089 | 12 | - | NCAPD2 | 12 | - |
| exon-exon | LOC112268089 | 12 | - | NCAPD2 | 12 | - |
| intron-exon | LOC112268099 | 12 | + | TBC1D32 | 6 | + |
| intron-exon | LOC112268118 | 13 | - | RB1 | 13 | - |
| intron-exon | LOC112268119 | 13 | - | LHFPL6 | 13 | - |
| exon-exon | LOC112268121 | 13 | - | SLAIN1 | 13 | - |
| exon-exon | LOC112268123 | 14 | - | LOC105370447 | 14 | - |
| exon-exon | LOC112268123 | 14 | - | LOC105370447 | 14 | - |
| exon-exon | LOC112268123 | 14 | - | LOC105370447 | 14 | - |
| exon-exon | LOC112268123 | 14 | - | LOC105370447 | 14 | - |
| exon-exon | LOC112268127 | 14 | - | SERPINA5 | 14 | - |
| exon-intron | LOC112268127 | 14 | - | PPP6R2 | 22 | - |
| exon-exon | LOC112268127 | 14 | - | SERPINA5 | 14 | - |
| exon-exon | LOC112268127 | 14 | - | SERPINA5 | 14 | - |
| exon-exon | LOC112268127 | 14 | - | SERPINA5 | 14 | - |
| exon-exon | LOC112268136 | 14 | - | CLEC14A | 14 | - |
| exon-exon | LOC112268136 | 14 | - | CLEC14A | 14 | - |
| intron-exon | LOC112268138 | 14 | + | IGHG1 | 14 | + |
| intron-exon | LOC112268138 | 14 | + | IGHG1 | 14 | + |
| intron-exon | LOC112268138 | 14 | + | IGHG1 | 14 | + |
| intron-exon | LOC112268138 | 14 | + | IGHG1 | 14 | + |
| intron-exon | LOC112268138 | 14 | + | IGHG3 | 14 | + |
| intron-exon | LOC112268138 | 14 | + | IGHG3 | 14 | + |
| intron-exon | LOC112268138 | 14 | + | IGHG3 | 14 | + |
| intron-exon | LOC112268138 | 14 | + | IGHG3 | 14 | + |
| intron-exon | LOC112268142 | 15 | + | LOC105370913 | 15 | + |
| exon-exon | LOC112268142 | 15 | + | LOC646934 | 15 | + |
| intron-exon | LOC112268148 | 15 | - | CNOT1 | 16 | + |
| intron-exon | LOC112268148 | 15 | - | TMOD3 | 15 | - |
| exon-exon | LOC112268149 | 15 | + | MAPK6 | 15 | + |
| exon-exon | LOC112268149 | 15 | + | MAPK6 | 15 | + |
| exon-intron | LOC112268163 | 15 | - | SEMA4B | 15 | - |
| exon-exon | LOC112268170 | 16 | - | MAZ | 16 | - |
| intron-exon | LOC112268170 | 16 | - | MAZ | 16 | - |
| intron-exon | LOC112268170 | 16 | - | MAZ | 16 | - |
| intron-exon | LOC112268170 | 16 | - | MAZ | 16 | - |
| exon-exon | LOC112268170 | 16 | - | MAZ | 16 | - |
| exon-exon | LOC112268170 | 16 | - | MAZ | 16 | - |
| exon-exon | LOC112268170 | 16 | - | MAZ | 16 | - |
| exon-exon | LOC112268170 | 16 | - | MAZ | 16 | - |
| exon-exon | LOC112268171 | 16 | - | EIF3CL | 16 | - |
| exon-exon | LOC112268171 | 16 | - | EIF3CL | 16 | - |
| exon-exon | LOC112268179 | 16 | - | SPIRE2 | 16 | - |
| exon-exon | LOC112268184 | 17 | + | KPNB1 | 17 | + |
| exon-exon | LOC112268184 | 17 | + | KPNB1 | 17 | + |
| exon-exon | LOC112268184 | 17 | - | NPEPPS | 17 | - |
| exon-exon | LOC112268184 | 17 | - | NPEPPS | 17 | - |
| exon-intron | LOC112268217 | 18 | - | AP005901.3 | 18 | - |
| exon-exon | LOC112268218 | 1 | - | SLC35E2A | 1 | - |
| exon-exon | LOC112268244 | 19 | - | ZNF614 | 19 | - |
| exon-exon | LOC112268244 | 19 | - | ZNF614 | 19 | - |
| exon-exon | LOC112268244 | 19 | - | ZNF614 | 19 | - |
| exon-exon | LOC112268244 | 19 | - | ZNF614 | 19 | - |
| exon-exon | LOC112268244 | 19 | - | ZNF614 | 19 | - |
| exon-exon | LOC112268244 | 19 | - | ZNF614 | 19 | - |
| exon-exon | LOC112268244 | 19 | - | ZNF614 | 19 | - |
| intron-exon | LOC112268259 | 1 | - | ZNF731P | 1 | - |
| intron-exon | LOC112268279 | 21 | - | ZFAS1 | 20 | - |
| intron-exon | LOC112268284 | 21 | - | RNA45SN2 | 21 | + |
| intron-exon | LOC112268284 | 21 | - | RNA45SN3 | 21 | + |
| intron-exon | LOC112268284 | 21 | - | KMT2C | 7 | - |
| intron-exon | LOC112268284 | 21 | - | ATP1A3 | 19 | + |
| intron-exon | LOC112268284 | 21 | - | ATP1A3 | 19 | + |
| intron-exon | LOC112268284 | 21 | - | VEGFA | 6 | - |
| intron-exon | LOC112268284 | 21 | - | ATP1A3 | 19 | + |
| exon-exon | LOC112268294 | 22 | + | LOC102723722 | 22 | + |
| intron-exon | LOC112268294 | 22 | - | CYP2D6 | 22 | - |
| intron-exon | LOC112268294 | 22 | - | CYP2D6 | 22 | - |
| intron-exon | LOC112268294 | 22 | - | CYP2D6 | 22 | - |
| intron-exon | LOC112268294 | 22 | - | CYP2D6 | 22 | - |
| intron-exon | LOC112268294 | 22 | - | CYP2D6 | 22 | - |
| intron-exon | LOC112268294 | 22 | - | CYP2D6 | 22 | - |
| intron-exon | LOC112268294 | 22 | - | CYP2D6 | 22 | - |
| intron-exon | LOC112268294 | 22 | - | CYP2D6 | 22 | - |
| intron-exon | LOC112268294 | 22 | - | CYP2D6 | 22 | - |
| intron-exon | LOC112268294 | 22 | - | CYP2D6 | 22 | - |
| intron-exon | LOC112268294 | 22 | - | CYP2D6 | 22 | - |
| intron-exon | LOC112268294 | 22 | - | CYP2D6 | 22 | - |
| intron-exon | LOC112268294 | 22 | - | CYP2D6 | 22 | - |
| intron-exon | LOC112268294 | 22 | - | CYP2D6 | 22 | - |
| intron-exon | LOC112268294 | 22 | - | CYP2D6 | 22 | - |
| intron-exon | LOC112268294 | 22 | - | CYP2D6 | 22 | - |
| intron-exon | LOC112268294 | 22 | - | CYP2D6 | 22 | - |
| intron-exon | LOC112268294 | 22 | - | CYP2D6 | 22 | - |
| intron-exon | LOC112268294 | 22 | - | CYP2D6 | 22 | - |
| intron-exon | LOC112268294 | 22 | - | CYP2D6 | 22 | - |
| intron-exon | LOC112268294 | 22 | - | CYP2D6 | 22 | - |
| intron-exon | LOC112268294 | 22 | - | CYP2D6 | 22 | - |
| intron-exon | LOC112268294 | 22 | - | CYP2D6 | 22 | - |
| intron-exon | LOC112268294 | 22 | - | CYP2D6 | 22 | - |
| intron-exon | LOC112268294 | 22 | - | CYP2D6 | 22 | - |
| intron-exon | LOC112268294 | 22 | - | CYP2D6 | 22 | - |
| intron-exon | LOC112268294 | 22 | - | CYP2D6 | 22 | - |
| intron-exon | LOC112268294 | 22 | - | CYP2D6 | 22 | - |
| intron-exon | LOC112268294 | 22 | - | CYP2D6 | 22 | - |
| exon-exon | LOC112268296 | 22 | - | APOL1 | 22 | - |
| exon-exon | LOC112268296 | 22 | - | APOL1 | 22 | - |
| exon-exon | LOC112268296 | 22 | - | APOL1 | 22 | - |
| exon-exon | LOC112268311 | Y | + | TTTY15 | Y | + |
| exon-intron | LOC112268311 | Y | - | TTTY15 | Y | - |
| intron-exon | LOC112268321 | 2 | - | TRAPPC12 | 2 | - |
| intron-exon | LOC112268419 | 2 | - | STAMBP | 2 | - |
| intron-exon | LOC112268419 | 2 | - | STAMBP | 2 | - |
| exon-exon | LOC112268420 | 2 | - | ST3GAL5 | 2 | - |
| exon-intron | LOC112268423 | 2 | - | PIK3CB | 3 | + |
| intron-exon | LOC112268444 | 3 | - | LRRFIP2 | 3 | - |
| exon-exon | LOC112268463 | 4 | - | HTRA3 | 4 | - |
| exon-exon | LOC112268471 | 4 | - | GRIA2 | 4 | - |
| intron-exon | LOC112340391 | 16 | + | RBBP6 | 16 | + |
| intron-exon | LOC112340391 | 16 | + | RBBP6 | 16 | + |
| intron-exon | LOC112529895 | 17 | - | SCO1 | 17 | - |
| intron-exon | LOC112529895 | 17 | - | SCO1 | 17 | - |
| intron-exon | LOC112529895 | 17 | - | SCO1 | 17 | - |
| intron-exon | LOC112529895 | 17 | - | SCO1 | 17 | - |
| intron-exon | LOC112533641 | 17 | - | ATXN7L3 | 17 | - |
| intron-exon | LOC112533648 | 17 | - | PPP1R9B | 17 | - |
| intron-exon | LOC112533650 | 17 | - | H1-9P | 17 | - |
| intron-exon | LOC112533667 | 17 | - | FDXR | 17 | - |
| intron-exon | LOC112543454 | 19 | - | FARSA | 19 | - |
| intron-exon | LOC112543454 | 19 | - | FARSA | 19 | - |
| intron-exon | LOC112552175 | 19 | - | NDUFA11 | 19 | - |
| intron-exon | LOC112577454 | 19 | + | ZNF446 | 19 | + |
| intron-exon | LOC112577481 | 1 | - | ATP1A1-AS1 | 1 | - |
| intron-exon | LOC112577525 | 1 | - | MORN1 | 1 | - |
| intron-exon | LOC112577581 | 1 | - | LRRC47 | 1 | - |
| intron-exon | LOC112577581 | 1 | - | LRRC47 | 1 | - |
| intron-exon | LOC112577599 | 1 | - | EXO5 | 1 | - |
| intron-exon | LOC112577599 | 1 | - | EXO5 | 1 | - |
| intron-exon | LOC112694698 | 20 | - | SPEF1 | 20 | - |
| intron-exon | LOC112694768 | 22 | - | TOP3B | 22 | - |
| intron-exon | LOC112694768 | 22 | - | TOP3B | 22 | - |
| intron-exon | LOC112694768 | 22 | - | TOP3B | 22 | - |
| intron-exon | LOC112694768 | 22 | - | TOP3B | 22 | - |
| intron-exon | LOC112694768 | 22 | - | TOP3B | 22 | - |
| intron-exon | LOC112694768 | 22 | - | TOP3B | 22 | - |
| intron-exon | LOC112694768 | 22 | - | TOP3B | 22 | - |
| intron-exon | LOC112694768 | 22 | - | TOP3B | 22 | - |
| intron-exon | LOC112694768 | 22 | - | TOP3B | 22 | - |
| intron-exon | LOC112694768 | 22 | - | TOP3B | 22 | - |
| intron-exon | LOC112694768 | 22 | - | TOP3B | 22 | - |
| intron-exon | LOC112694768 | 22 | - | TOP3B | 22 | - |
| intron-exon | LOC112694768 | 22 | - | TOP3B | 22 | - |
| intron-exon | LOC112694768 | 22 | - | TOP3B | 22 | - |
| intron-exon | LOC112694768 | 22 | - | TOP3B | 22 | - |
| intron-exon | LOC112694768 | 22 | - | TOP3B | 22 | - |
| intron-exon | LOC112694768 | 22 | - | TOP3B | 22 | - |
| intron-exon | LOC112694768 | 22 | - | TOP3B | 22 | - |
| intron-exon | LOC112695092 | 22 | - | PLA2G6 | 22 | - |
| intron-exon | LOC112695092 | 22 | - | PLA2G6 | 22 | - |
| intron-exon | LOC112695092 | 22 | - | PLA2G6 | 22 | - |
| intron-exon | LOC112695092 | 22 | - | PLA2G6 | 22 | - |
| intron-exon | LOC112695092 | 22 | - | PLA2G6 | 22 | - |
| intron-exon | LOC112695092 | 22 | - | PLA2G6 | 22 | - |
| intron-exon | LOC112695092 | 22 | - | PLA2G6 | 22 | - |
| intron-exon | LOC112695092 | 22 | - | PLA2G6 | 22 | - |
| intron-exon | LOC112695092 | 22 | - | PLA2G6 | 22 | - |
| intron-exon | LOC112695092 | 22 | - | PLA2G6 | 22 | - |
| intron-exon | LOC112695092 | 22 | - | PLA2G6 | 22 | - |
| intron-exon | LOC112695092 | 22 | - | PLA2G6 | 22 | - |
| intron-exon | LOC112695092 | 22 | - | PLA2G6 | 22 | - |
| intron-exon | LOC112695092 | 22 | - | PLA2G6 | 22 | - |
| intron-exon | LOC112935933 | 3 | + | RPL14P1 | 12 | + |
| intron-exon | LOC112935944 | 3 | - | SMARCC1 | 3 | - |
| intron-exon | LOC112935946 | 3 | - | RHOA | 3 | - |
| intron-exon | LOC112935946 | 3 | - | RHOA | 3 | - |
| intron-exon | LOC112997560 | 5 | + | KIF20A | 5 | + |
| intron-exon | LOC112997560 | 5 | - | BRD8 | 5 | - |
| intron-exon | LOC112997560 | 5 | - | BRD8 | 5 | - |
| intron-exon | LOC112997560 | 5 | - | BRD8 | 5 | - |
| intron-exon | LOC112997560 | 5 | - | BRD8 | 5 | - |
| intron-exon | LOC112997560 | 5 | - | BRD8 | 5 | - |
| intron-exon | LOC112997560 | 5 | - | BRD8 | 5 | - |
| intron-exon | LOC112997560 | 5 | - | BRD8 | 5 | - |
| intron-exon | LOC112997560 | 5 | - | BRD8 | 5 | - |
| intron-exon | LOC112997560 | 5 | - | BRD8 | 5 | - |
| intron-exon | LOC112997560 | 5 | - | BRD8 | 5 | - |
| intron-exon | LOC112997560 | 5 | - | BRD8 | 5 | - |
| intron-exon | LOC112997560 | 5 | - | BRD8 | 5 | - |
| intron-exon | LOC112997560 | 5 | - | BRD8 | 5 | - |
| intron-exon | LOC112997596 | 5 | + | GPBP1 | 5 | + |
| intron-exon | LOC113174982 | 6 | - | TDP2 | 6 | - |
| intron-exon | LOC113174982 | 6 | - | TDP2 | 6 | - |
| intron-exon | LOC113174982 | 6 | - | TDP2 | 6 | - |
| intron-exon | LOC113687202 | 7 | - | LOC102723672 | 7 | - |
| intron-exon | LOC113743973 | 7 | - | MAD1L1 | 7 | - |
| intron-exon | LOC113743973 | 7 | - | MAD1L1 | 7 | - |
| intron-exon | LOC113743973 | 7 | - | MAD1L1 | 7 | - |
| intron-exon | LOC113743973 | 7 | - | MAD1L1 | 7 | - |
| intron-exon | LOC113743973 | 7 | - | MAD1L1 | 7 | - |
| intron-exon | LOC113743973 | 7 | - | MAD1L1 | 7 | - |
| intron-exon | LOC113743973 | 7 | - | MAD1L1 | 7 | - |
| intron-exon | LOC113743973 | 7 | - | MAD1L1 | 7 | - |
| intron-exon | LOC113743973 | 7 | - | MAD1L1 | 7 | - |
| intron-exon | LOC113743973 | 7 | - | MAD1L1 | 7 | - |
| intron-exon | LOC113743973 | 7 | - | MAD1L1 | 7 | - |
| intron-exon | LOC113743973 | 7 | - | MAD1L1 | 7 | - |
| intron-exon | LOC113743973 | 7 | - | MAD1L1 | 7 | - |
| intron-exon | LOC113743973 | 7 | - | MAD1L1 | 7 | - |
| intron-exon | LOC113743973 | 7 | - | MAD1L1 | 7 | - |
| intron-exon | LOC113783877 | 8 | - | ANKRD46 | 8 | - |
| intron-exon | LOC113783877 | 8 | - | ANKRD46 | 8 | - |
| intron-exon | LOC113783877 | 8 | - | ANKRD46 | 8 | - |
| intron-exon | LOC113783877 | 8 | - | ANKRD46 | 8 | - |
| intron-exon | LOC113783877 | 8 | - | ANKRD46 | 8 | - |
| intron-exon | LOC113783877 | 8 | - | ANKRD46 | 8 | - |
| intron-exon | LOC113783877 | 8 | - | ANKRD46 | 8 | - |
| intron-exon | LOC113783877 | 8 | - | ANKRD46 | 8 | - |
| intron-exon | LOC113783877 | 8 | - | ANKRD46 | 8 | - |
| intron-exon | LOC113783877 | 8 | - | ANKRD46 | 8 | - |
| intron-exon | LOC113783877 | 8 | - | ANKRD46 | 8 | - |
| intron-exon | LOC113783877 | 8 | - | ANKRD46 | 8 | - |
| intron-exon | LOC113783877 | 8 | - | ANKRD46 | 8 | - |
| intron-exon | LOC113783877 | 8 | - | ANKRD46 | 8 | - |
| intron-exon | LOC113783877 | 8 | - | ANKRD46 | 8 | - |
| intron-exon | LOC113783877 | 8 | - | ANKRD46 | 8 | - |
| intron-exon | LOC113783877 | 8 | - | ANKRD46 | 8 | - |
| intron-exon | LOC113783877 | 8 | - | ANKRD46 | 8 | - |
| intron-exon | LOC113783877 | 8 | - | ANKRD46 | 8 | - |
| intron-exon | LOC113783877 | 8 | - | ANKRD46 | 8 | - |
| intron-exon | LOC113783877 | 8 | - | ANKRD46 | 8 | - |
| intron-exon | LOC113783877 | 8 | - | ANKRD46 | 8 | - |
| intron-exon | LOC113783877 | 8 | - | ANKRD46 | 8 | - |
| intron-exon | LOC113783877 | 8 | - | ANKRD46 | 8 | - |
| intron-exon | LOC113783877 | 8 | - | ANKRD46 | 8 | - |
| intron-exon | LOC113783877 | 8 | - | ANKRD46 | 8 | - |
| intron-exon | LOC113783877 | 8 | - | ANKRD46 | 8 | - |
| intron-exon | LOC113783877 | 8 | - | ANKRD46 | 8 | - |
| intron-exon | LOC113839504 | 9 | - | NDUFA8 | 9 | - |
| intron-exon | LOC113839528 | 9 | - | PTGES | 9 | - |
| intron-exon | LOC113839528 | 9 | - | PTGES | 9 | - |
| intron-exon | LOC113845780 | X | - | BEX1 | X | - |
| intron-exon | LOC113845780 | X | - | BEX1 | X | - |
| intron-exon | LOC113845780 | X | - | BEX1 | X | - |
| intron-exon | LOC113845780 | X | - | BEX1 | X | - |
| intron-exon | LOC113845780 | X | - | BEX1 | X | - |
| intron-exon | LOC113845780 | X | - | BEX1 | X | - |
| intron-exon | LOC113845780 | X | - | BEX1 | X | - |
| intron-exon | LOC113845780 | X | - | BEX1 | X | - |
| intron-exon | LOC113845780 | X | - | BEX1 | X | - |
| intron-exon | LOC113845780 | X | - | BEX1 | X | - |
| intron-exon | LOC113845780 | X | - | BEX1 | X | - |
| intron-exon | LOC113845780 | X | - | BEX1 | X | - |
| intron-exon | LOC113845780 | X | - | BEX1 | X | - |
| intron-exon | LOC113845780 | X | - | BEX1 | X | - |
| intron-exon | LOC113845780 | X | - | BEX1 | X | - |
| intron-exon | LOC113845780 | X | - | BEX1 | X | - |
| intron-exon | LOC113845780 | X | - | BEX1 | X | - |
| intron-exon | LOC113845780 | X | - | BEX1 | X | - |
| intron-exon | LOC113845780 | X | - | BEX1 | X | - |
| intron-exon | LOC114004369 | 2 | + | NCL | 2 | + |
| intron-exon | LOC114827827 | 1 | - | NPPA-AS1 | 1 | - |
| intron-exon | LOC114827850 | 12 | - | MYL2 | 12 | - |
| intron-exon | LOC116183095 | 7 | - | GIGYF1 | 7 | - |
| exon-exon | LOC145694 | 15 | + | KIF23 | 15 | + |
| exon-exon | LOC145694 | 15 | - | PAQR5 | 15 | - |
| exon-intron | LOC145783 | 15 | - | ZNF280D | 15 | - |
| exon-exon | LOC149684 | 20 | + | BPI | 20 | + |
| exon-intron | LOC150417 | 22 | - | KCNMA1 | 10 | + |
| exon-intron | LOC154761 | 7 | - | TCAF2P1 | 7 | - |
| exon-exon | LOC257396 | 5 | - | MOCS2 | 5 | - |
| exon-exon | LOC257396 | 5 | - | MOCS2 | 5 | - |
| intron-exon | LOC283214 | 11 | + | DGAT2 | 11 | + |
| intron-exon | LOC283214 | 11 | + | DGAT2 | 11 | + |
| intron-exon | LOC283335 | 12 | + | TNS2 | 12 | + |
| intron-exon | LOC283335 | 12 | - | EIF4B | 12 | - |
| exon-exon | LOC283922 | 16 | - | PDPR | 16 | - |
| exon-intron | LOC284412 | 19 | + | AC016590.1 | 19 | + |
| exon-intron | LOC284454 | 19 | - | MIR27A | 19 | - |
| exon-exon | LOC284685 | 1 | - | ERG | 21 | - |
| exon-exon | LOC284685 | 1 | - | PATZ1 | 22 | - |
| exon-exon | LOC284912 | 22 | - | MB | 22 | - |
| intron-exon | LOC286059 | 8 | - | TNFRSF10B | 8 | - |
| intron-exon | LOC286059 | 8 | - | TNFRSF10B | 8 | - |
| intron-exon | LOC286059 | 8 | - | TNFRSF10B | 8 | - |
| intron-exon | LOC286059 | 8 | - | TNFRSF10B | 8 | - |
| intron-exon | LOC286059 | 8 | - | TNFRSF10B | 8 | - |
| intron-exon | LOC286059 | 8 | - | TNFRSF10B | 8 | - |
| intron-exon | LOC286059 | 8 | - | TNFRSF10B | 8 | - |
| intron-exon | LOC286059 | 8 | - | TNFRSF10B | 8 | - |
| intron-exon | LOC286059 | 8 | - | TNFRSF10B | 8 | - |
| intron-exon | LOC286059 | 8 | - | TNFRSF10B | 8 | - |
| intron-exon | LOC286059 | 8 | - | TNFRSF10B | 8 | - |
| intron-exon | LOC286059 | 8 | - | TNFRSF10B | 8 | - |
| intron-exon | LOC286059 | 8 | - | TNFRSF10B | 8 | - |
| intron-exon | LOC286059 | 8 | - | TNFRSF10B | 8 | - |
| intron-exon | LOC286059 | 8 | - | TNFRSF10B | 8 | - |
| intron-exon | LOC286059 | 8 | - | TNFRSF10B | 8 | - |
| intron-exon | LOC286059 | 8 | - | TNFRSF10B | 8 | - |
| intron-exon | LOC286059 | 8 | - | TNFRSF10B | 8 | - |
| intron-exon | LOC286059 | 8 | - | TNFRSF10B | 8 | - |
| intron-exon | LOC286059 | 8 | - | TNFRSF10B | 8 | - |
| intron-exon | LOC286059 | 8 | - | TNFRSF10B | 8 | - |
| intron-exon | LOC339874 | 3 | - | NEK11 | 3 | - |
| exon-exon | LOC388436 | 17 | + | EPN2 | 17 | + |
| exon-exon | LOC388436 | 17 | + | EPN2 | 17 | + |
| intron-exon | LOC388996 | 2 | + | LSP1P4 | 2 | + |
| exon-exon | LOC389906 | X | + | FAM239B | X | + |
| intron-exon | LOC390638 | 15 | + | VPS33B-DT | 15 | + |
| exon-intron | LOC390705 | 16 | + | AC133548.2 | 16 | + |
| exon-exon | LOC391707 | 4 | + | GRIA2 | 4 | + |
| intron-exon | LOC399975 | 11 | - | ARHGAP32 | 11 | - |
| exon-intron | LOC399975 | 11 | - | ARHGAP32 | 11 | - |
| intron-exon | LOC400710 | 19 | - | ZNF473 | 19 | - |
| intron-exon | LOC400710 | 19 | - | ZNF473 | 19 | - |
| intron-exon | LOC400710 | 19 | - | ZNF473 | 19 | - |
| exon-intron | LOC401357 | 7 | + | AC118758.3 | 7 | + |
| intron-exon | LOC403312 | 11 | - | FEZ1 | 11 | - |
| exon-exon | LOC414300 | 12 | + | WASHC4 | 12 | + |
| exon-exon | LOC440346 | 16 | - | CDR2 | 16 | - |
| intron-exon | LOC440910 | 2 | - | FAM168B | 2 | - |
| intron-exon | LOC441242 | 7 | + | CCT6P1 | 7 | + |
| exon-intron | LOC441666 | 10 | + | MAP4K5 | 14 | - |
| exon-intron | LOC441666 | 10 | - | LOC101929373 | 10 | - |
| intron-exon | LOC497256 | 9 | + | SPATA31E1 | 9 | + |
| intron-exon | LOC497256 | 9 | + | SPATA31E1 | 9 | + |
| exon-exon | LOC642361 | 10 | + | NUTM2E | 10 | + |
| intron-exon | LOC642484 | 18 | + | LINC01905 | 18 | + |
| exon-intron | LOC642484 | 18 | + | LINC01905 | 18 | + |
| exon-intron | LOC642502 | 17 | - | RPA1 | 17 | - |
| exon-intron | LOC642943 | 9 | + | AL136981.1 | 9 | + |
| intron-exon | LOC643327 | 6 | - | SLC22A23 | 6 | - |
| intron-exon | LOC643339 | 12 | + | NUDT4 | 12 | + |
| exon-exon | LOC643542 | 18 | - | DSEL | 18 | - |
| intron-exon | LOC643542 | 18 | - | DSEL | 18 | - |
| intron-exon | LOC644215 | 10 | - | RRP12 | 10 | - |
| intron-exon | LOC644215 | 10 | - | RRP12 | 10 | - |
| intron-exon | LOC644215 | 10 | - | RRP12 | 10 | - |
| exon-exon | LOC644456 | 2 | + | LINC01122 | 2 | + |
| exon-exon | LOC644656 | 11 | + | ZNF143 | 11 | + |
| exon-intron | LOC645139 | 17 | + | AC026271.4 | 17 | + |
| exon-exon | LOC645177 | 12 | + | IRAG2 | 12 | + |
| exon-exon | LOC645177 | 12 | + | IRAG2 | 12 | + |
| intron-exon | LOC645177 | 12 | - | C12orf77 | 12 | - |
| exon-exon | LOC645513 | 4 | + | PDE5A | 4 | + |
| exon-intron | LOC646517 | 6 | - | CBR4 | 4 | - |
| exon-intron | LOC646626 | 1 | + | DDAH1 | 1 | + |
| intron-exon | LOC648987 | 5 | + | LOC105374748 | 5 | + |
| intron-exon | LOC648987 | 5 | + | LOC153684 | 5 | + |
| intron-exon | LOC648987 | 5 | + | LOC153684 | 5 | + |
| intron-exon | LOC648987 | 5 | + | LOC153684 | 5 | + |
| intron-exon | LOC648987 | 5 | + | LOC100506639 | 5 | + |
| exon-intron | LOC653513 | 1 | - | AC245297.3 | 1 | - |
| intron-exon | LOC653513 | 1 | - | LOC730257 | 1 | - |
| intron-exon | LOC653513 | 1 | - | LOC105378954 | 1 | + |
| intron-exon | LOC653513 | 1 | - | LOC730257 | 1 | - |
| exon-exon | LOC654338 | 21 | + | SOGA1 | 20 | + |
| intron-exon | LOC724084 | 1 | + | DEGS1 | 1 | + |
| exon-exon | LOC728392 | 17 | + | NLRP1 | 17 | + |
| exon-exon | LOC728975 | 11 | + | CAPN1 | 11 | + |
| exon-exon | LOC728975 | 11 | + | CAPN1 | 11 | + |
| exon-intron | LOC729080 | 5 | - | LOC112267968 | 6 | + |
| exon-intron | LOC729296 | 20 | + | CDH4 | 20 | + |
| intron-exon | LOC729732 | 8 | + | TRMT9B | 8 | + |
| exon-intron | LOC729966 | 19 | - | PDE4C | 19 | - |
| exon-intron | LOC729970 | 1 | - | LOC105378862 | 1 | - |
| exon-exon | LOC730021 | 3 | - | PFN2 | 3 | - |
| intron-exon | LOC730076 | 2 | - | LOC100129144 | X | - |
| exon-exon | LOC730098 | 9 | + | LOC107987063 | 9 | + |
| exon-exon | LOC730098 | 9 | + | LOC107987063 | 9 | + |
| exon-exon | LOC730098 | 9 | + | LOC107987063 | 9 | + |
| exon-exon | LOC730183 | 16 | + | SRCAP | 16 | + |
| exon-exon | LOC730234 | 7 | - | GTF2IP13 | 7 | - |
| exon-intron | LOC730257 | 1 | + | AC245297.3 | 1 | + |
| exon-intron | LOC730257 | 1 | + | AC245297.3 | 1 | + |
| exon-exon | LOC732229 | 19 | - | ZFAND5 | 9 | - |
| exon-intron | LOC93622 | 4 | + | FARS2 | 6 | + |
| exon-exon | LONP1 | 19 | - | RPL36 | 19 | - |
| exon-exon | LONP1 | 19 | - | AZIN1 | 8 | - |
| exon-intron | LONP2 | 16 | + | SIAH1 | 16 | + |
| exon-intron | LONP2 | 16 | - | SFMBT1 | 3 | - |
| intron-exon | LOXL1-AS1 | 15 | + | LOXL1 | 15 | + |
| exon-intron | LOXL1-AS1 | 15 | - | TBC1D21 | 15 | - |
| intron-exon | LOXL2 | 8 | + | LOC100507156 | 8 | + |
| intron-exon | LOXL2 | 8 | + | ENTPD4 | 8 | + |
| exon-exon | LOXL2 | 8 | + | ENTPD4 | 8 | + |
| exon-intron | LOXL3 | 2 | + | DOK1 | 2 | + |
| exon-exon | LOXL3 | 2 | - | HTRA2 | 2 | - |
| exon-exon | LOXL3 | 2 | - | HTRA2 | 2 | - |
| exon-exon | LOXL3 | 2 | - | HTRA2 | 2 | - |
| exon-exon | LOXL3 | 2 | - | HTRA2 | 2 | - |
| exon-exon | LOXL3 | 2 | - | HTRA2 | 2 | - |
| exon-exon | LOXL3 | 2 | - | HTRA2 | 2 | - |
| exon-exon | LOXL3 | 2 | - | HTRA2 | 2 | - |
| exon-exon | LOXL3 | 2 | - | HTRA2 | 2 | - |
| exon-exon | LOXL3 | 2 | - | HTRA2 | 2 | - |
| exon-exon | LOXL3 | 2 | - | HTRA2 | 2 | - |
| exon-exon | LOXL3 | 2 | - | HTRA2 | 2 | - |
| exon-exon | LOXL3 | 2 | - | HTRA2 | 2 | - |
| exon-exon | LOXL3 | 2 | - | HTRA2 | 2 | - |
| exon-exon | LOXL3 | 2 | - | HTRA2 | 2 | - |
| exon-exon | LOXL3 | 2 | - | HTRA2 | 2 | - |
| exon-exon | LOXL3 | 2 | - | HTRA2 | 2 | - |
| exon-exon | LOXL3 | 2 | - | HTRA2 | 2 | - |
| exon-exon | LOXL3 | 2 | - | HTRA2 | 2 | - |
| exon-exon | LOXL3 | 2 | - | HTRA2 | 2 | - |
| exon-exon | LOXL3 | 2 | - | HTRA2 | 2 | - |
| exon-exon | LOXL3 | 2 | - | HTRA2 | 2 | - |
| exon-exon | LOXL3 | 2 | - | HTRA2 | 2 | - |
| exon-exon | LOXL3 | 2 | - | HTRA2 | 2 | - |
| exon-exon | LOXL3 | 2 | - | HTRA2 | 2 | - |
| exon-exon | LOXL3 | 2 | - | HTRA2 | 2 | - |
| exon-exon | LOXL3 | 2 | - | HTRA2 | 2 | - |
| exon-exon | LOXL3 | 2 | - | HTRA2 | 2 | - |
| exon-exon | LOXL3 | 2 | - | HTRA2 | 2 | - |
| exon-exon | LOXL3 | 2 | - | HTRA2 | 2 | - |
| exon-exon | LOXL3 | 2 | - | HTRA2 | 2 | - |
| exon-exon | LOXL3 | 2 | - | HTRA2 | 2 | - |
| exon-exon | LPA | 6 | - | PLG | 6 | + |
| exon-intron | LPAR6 | 13 | - | RB1 | 13 | - |
| exon-intron | LPAR6 | 13 | - | RB1 | 13 | - |
| exon-intron | LPCAT1 | 5 | + | COX15 | 10 | - |
| intron-exon | LPCAT3 | 12 | - | EMG1 | 12 | - |
| intron-exon | LPCAT3 | 12 | - | EMG1 | 12 | - |
| intron-exon | LPCAT3 | 12 | - | EMG1 | 12 | - |
| intron-exon | LPGAT1-AS1 | 1 | - | LPGAT1 | 1 | - |
| exon-intron | LPIN3 | 20 | - | NEFH | 22 | - |
| exon-exon | LRBA | 4 | + | MAB21L2 | 4 | + |
| exon-exon | LRFN2 | 6 | + | LOC105375051 | 6 | + |
| exon-exon | LRIG1 | 3 | - | SLC25A26 | 3 | - |
| exon-exon | LRIG3 | 12 | - | ROS1 | 6 | - |
| exon-exon | LRIG3 | 12 | - | ROS1 | 6 | - |
| intron-exon | LRP1 | 12 | - | STAT6 | 12 | - |
| intron-exon | LRP1 | 12 | - | STAT6 | 12 | - |
| intron-exon | LRP1 | 12 | - | STAT6 | 12 | - |
| intron-exon | LRP1 | 12 | - | STAT6 | 12 | - |
| exon-intron | LRP2 | 2 | + | PAPPA | 9 | + |
| intron-exon | LRP2BP | 4 | + | ANKRD37 | 4 | + |
| exon-exon | LRP2BP | 4 | + | ANKRD37 | 4 | + |
| exon-exon | LRP2BP | 4 | - | SNX25 | 4 | - |
| exon-intron | LRP8 | 1 | + | LOC105378728 | 1 | + |
| exon-exon | LRP8 | 1 | - | LOC100507564 | 1 | - |
| exon-intron | LRPPRC | 2 | + | GPD2 | 2 | + |
| exon-intron | LRR1 | 14 | - | RPS29 | 14 | - |
| intron-exon | LRRC2 | 3 | + | TDGF1 | 3 | + |
| exon-exon | LRRC37A | 17 | + | LOC105369225 | 17 | - |
| intron-exon | LRRC37A2 | 17 | - | ARL17A | 17 | - |
| intron-exon | LRRC39 | 1 | - | TRMT13 | 1 | - |
| exon-exon | LRRC41 | 1 | - | RAD54L | 1 | - |
| exon-intron | LRRC47 | 1 | - | EIF3I | 1 | + |
| intron-exon | LRRC49 | 15 | - | LARP6 | 15 | - |
| intron-exon | LRRC49 | 15 | - | LARP6 | 15 | - |
| intron-exon | LRRC49 | 15 | - | LARP6 | 15 | - |
| intron-exon | LRRC49 | 15 | - | LARP6 | 15 | - |
| intron-exon | LRRC49 | 15 | - | LARP6 | 15 | - |
| intron-exon | LRRC57 | 15 | - | SNAP23 | 15 | - |
| intron-exon | LRRC57 | 15 | - | SNAP23 | 15 | - |
| intron-exon | LRRC57 | 15 | - | SNAP23 | 15 | - |
| intron-exon | LRRC57 | 15 | - | SNAP23 | 15 | - |
| intron-exon | LRRC57 | 15 | - | SNAP23 | 15 | - |
| exon-exon | LRRC58 | 3 | + | KIAA0513 | 16 | - |
| intron-exon | LRRC6 | 8 | + | TMEM71 | 8 | + |
| exon-intron | LRRC7-AS1 | 1 | - | LRRC7 | 1 | - |
| exon-intron | LRRC7-AS1 | 1 | - | LRRC7 | 1 | - |
| intron-exon | LRRC72 | 7 | - | SOSTDC1 | 7 | - |
| exon-exon | LRRC73 | 6 | + | POLR1C | 6 | + |
| exon-exon | LRRC75A | 17 | - | SNHG29 | 17 | - |
| exon-exon | LRRC75A | 17 | - | SNHG29 | 17 | - |
| exon-intron | LRRC75A | 17 | - | SNHG29 | 17 | - |
| exon-exon | LRRC75A | 17 | - | SNHG29 | 17 | - |
| exon-exon | LRRC75A | 17 | - | SNHG29 | 17 | - |
| exon-exon | LRRC75A | 17 | - | SNHG29 | 17 | - |
| exon-exon | LRRC75A | 17 | - | SNHG29 | 17 | - |
| exon-exon | LRRC75A | 17 | - | SNHG29 | 17 | - |
| exon-exon | LRRC75A | 17 | - | SNHG29 | 17 | - |
| exon-exon | LRRC75A | 17 | - | SNHG29 | 17 | - |
| exon-exon | LRRC75A | 17 | - | SNHG29 | 17 | - |
| exon-exon | LRRC75A | 17 | - | SNHG29 | 17 | - |
| exon-exon | LRRC75A | 17 | - | SNHG29 | 17 | - |
| exon-exon | LRRC75A | 17 | - | SNHG29 | 17 | - |
| exon-exon | LRRC75A | 17 | - | SNHG29 | 17 | - |
| exon-exon | LRRC75A | 17 | - | SNHG29 | 17 | - |
| exon-exon | LRRC75A | 17 | - | SNHG29 | 17 | - |
| exon-exon | LRRC75A | 17 | - | SNHG29 | 17 | - |
| exon-exon | LRRC75A | 17 | - | SNHG29 | 17 | - |
| exon-exon | LRRC75A | 17 | - | SNHG29 | 17 | - |
| exon-exon | LRRC75A | 17 | - | SNHG29 | 17 | - |
| exon-exon | LRRC75A | 17 | - | SNHG29 | 17 | - |
| exon-exon | LRRC75A | 17 | - | SNHG29 | 17 | - |
| exon-exon | LRRC75A | 17 | - | SNHG29 | 17 | - |
| exon-exon | LRRC75A | 17 | - | SNHG29 | 17 | - |
| exon-exon | LRRC75A | 17 | - | SNHG29 | 17 | - |
| exon-exon | LRRC75A | 17 | - | SNHG29 | 17 | - |
| exon-exon | LRRC75A | 17 | - | SNHG29 | 17 | - |
| exon-exon | LRRC75A | 17 | - | SNHG29 | 17 | - |
| exon-exon | LRRC75A | 17 | - | SNHG29 | 17 | - |
| exon-exon | LRRC75A | 17 | - | SNHG29 | 17 | - |
| exon-exon | LRRC75A | 17 | - | SNHG29 | 17 | - |
| exon-exon | LRRC75A | 17 | - | SNHG29 | 17 | - |
| exon-exon | LRRC75A | 17 | - | SNHG29 | 17 | - |
| exon-exon | LRRC75A | 17 | - | SNHG29 | 17 | - |
| exon-exon | LRRC8C | 1 | + | LRRC8D | 1 | + |
| exon-intron | LRRD1 | 7 | - | CYP51A1-AS1 | 7 | - |
| exon-intron | LRRD1 | 7 | - | CYP51A1-AS1 | 7 | - |
| exon-exon | LRTOMT | 11 | + | R3HDM1 | 2 | - |
| exon-exon | LSM1 | 8 | + | BAG4 | 8 | + |
| exon-exon | LSM2 | 6 | + | HSPA1L | 6 | + |
| exon-intron | LSM3P3 | 2 | + | TCF7L1 | 2 | + |
| exon-intron | LSM4 | 19 | + | ERGIC1 | 5 | - |
| exon-exon | LSP1P5 | 1 | - | LSP1 | 11 | - |
| exon-intron | LST1 | 6 | + | NCR3 | 6 | + |
| exon-intron | LST1 | 6 | + | NCR3 | 6 | + |
| exon-intron | LST1 | 6 | + | NCR3 | 6 | + |
| exon-intron | LST1 | 6 | + | NCR3 | 6 | + |
| exon-intron | LST1 | 6 | + | NCR3 | 6 | + |
| exon-intron | LST1 | 6 | + | NCR3 | 6 | + |
| exon-intron | LST1 | 6 | - | NLRP12 | 19 | + |
| exon-intron | LTB4R | 14 | + | ADCY4 | 14 | + |
| intron-exon | LTBP2 | 14 | - | PLCB2 | 15 | - |
| exon-exon | LTBP3 | 11 | - | SCYL1 | 11 | - |
| exon-exon | LTBP3 | 11 | - | SCYL1 | 11 | - |
| exon-exon | LTBP3 | 11 | - | SCYL1 | 11 | - |
| exon-exon | LTBP3 | 11 | - | SCYL1 | 11 | - |
| exon-intron | LTBP3 | 11 | - | SCYL1 | 11 | - |
| exon-exon | LTBP3 | 11 | - | SCYL1 | 11 | - |
| exon-exon | LTBP3 | 11 | - | SCYL1 | 11 | - |
| exon-intron | LTBP3 | 11 | - | SCYL1 | 11 | - |
| exon-exon | LTBP3 | 11 | - | SCYL1 | 11 | - |
| exon-exon | LTBP3 | 11 | - | SCYL1 | 11 | - |
| exon-exon | LTBP3 | 11 | - | SCYL1 | 11 | - |
| exon-exon | LTBP3 | 11 | - | SCYL1 | 11 | - |
| exon-intron | LTBP3 | 11 | - | SCYL1 | 11 | - |
| exon-intron | LTBR | 12 | + | MVB12A | 19 | - |
| intron-exon | LTBR | 12 | - | SCNN1A | 12 | - |
| exon-intron | LTF | 3 | - | ZMYM5 | 13 | + |
| exon-exon | LTO1 | 11 | - | CCND1 | 11 | - |
| exon-exon | LTO1 | 11 | - | CCND1 | 11 | - |
| exon-exon | LTO1 | 11 | - | CCND1 | 11 | - |
| exon-exon | LTO1 | 11 | - | CCND1 | 11 | - |
| exon-exon | LTO1 | 11 | - | CCND1 | 11 | - |
| exon-exon | LTV1 | 6 | + | ZC2HC1B | 6 | + |
| exon-intron | LUC7L | 16 | + | LOC102723930 | 16 | + |
| exon-exon | LUC7L2 | 7 | + | KLRG2 | 7 | + |
| exon-intron | LUC7L3 | 17 | - | FP236383.3 | 21 | + |
| exon-exon | LUM | 12 | + | LUM | 12 | - |
| exon-exon | LURAP1 | 1 | - | POMGNT1 | 1 | - |
| intron-exon | LUZP4P1 | 10 | - | NEBL | 10 | - |
| exon-exon | LUZP6 | 7 | + | MTPN | 7 | + |
| exon-exon | LUZP6 | 7 | + | MTPN | 7 | + |
| exon-exon | LUZP6 | 7 | + | MTPN | 7 | + |
| exon-exon | LUZP6 | 7 | + | MTPN | 7 | + |
| exon-exon | LUZP6 | 7 | + | MTPN | 7 | + |
| exon-exon | LUZP6 | 7 | + | MTPN | 7 | + |
| intron-exon | LUZP6 | 7 | - | MTPN | 7 | - |
| intron-exon | LUZP6 | 7 | - | MTPN | 7 | - |
| intron-exon | LUZP6 | 7 | - | MTPN | 7 | - |
| intron-exon | LUZP6 | 7 | - | MTPN | 7 | - |
| exon-intron | LXN | 3 | - | GFM1 | 3 | - |
| exon-intron | LY6E | 8 | + | EXTL3 | 8 | - |
| exon-exon | LY6G5B | 6 | - | CSNK2B | 6 | - |
| exon-intron | LY6G6C | 6 | + | MPIG6B | 6 | + |
| exon-intron | LY6G6C | 6 | - | LY6G6F-LY6G6D | 6 | - |
| exon-intron | LY6G6E | 6 | - | LY6G6F-LY6G6D | 6 | - |
| exon-exon | LY6G6F | 6 | + | LY6G6D | 6 | + |
| exon-exon | LY6G6F-LY6G6D | 6 | + | LY6G6C | 6 | + |
| exon-exon | LY75 | 2 | - | CD302 | 2 | - |
| exon-exon | LY75 | 2 | - | CD302 | 2 | - |
| exon-exon | LYL1 | 19 | - | NFIX | 19 | - |
| exon-exon | LYL1 | 19 | - | NFIX | 19 | - |
| exon-exon | LYL1 | 19 | - | NFIX | 19 | - |
| exon-exon | LYL1 | 19 | - | NFIX | 19 | - |
| exon-exon | LYL1 | 19 | - | NFIX | 19 | - |
| exon-exon | LYNX1 | 8 | - | SLURP2 | 8 | - |
| exon-intron | LYPD1 | 2 | + | LOC105373623 | 2 | + |
| exon-exon | LYRM2 | 6 | - | LOC105377887 | 6 | - |
| intron-exon | LYRM2 | 6 | - | LOC105377887 | 6 | - |
| exon-intron | LYRM2 | 6 | - | ANKRD6 | 6 | - |
| exon-intron | LYRM9 | 17 | - | LOC111365141 | 17 | - |
| exon-intron | LYSMD3 | 5 | - | SNX32 | 11 | + |
| exon-exon | LYSMD4 | 15 | - | SEC14L1 | 17 | + |
| exon-intron | LYZ | 12 | + | CD99 | Y | - |
| exon-intron | LYZ | 12 | - | LINC01858 | 19 | + |
| exon-intron | LYZL2 | 10 | - | LOC107983981 | 15 | + |
| intron-exon | LZTFL1 | 3 | + | CCR9 | 3 | + |
| exon-intron | LZTS3 | 20 | + | MYO1D | 17 | - |
| intron-exon | MACF1 | 1 | + | CCT5 | 5 | - |
| exon-intron | MACIR | 5 | + | SMG7 | 1 | - |
| intron-exon | MACROD1 | 11 | + | FLRT1 | 11 | + |
| intron-exon | MACROD2 | 20 | - | SEL1L2 | 20 | - |
| exon-intron | MACROD2-AS1 | 20 | - | MACROD2 | 20 | - |
| exon-intron | MAF | 16 | - | UBE2G1 | 17 | + |
| intron-exon | MAF1 | 8 | - | SHARPIN | 8 | - |
| intron-exon | MAF1 | 8 | - | SHARPIN | 8 | - |
| exon-exon | MAF1 | 8 | - | COX1 | MT | - |
| intron-exon | MAFF | 22 | - | PLA2G6 | 22 | - |
| exon-intron | MAFG | 17 | + | ACIN1 | 14 | - |
| exon-intron | MAFTRR | 16 | - | LOC105371356 | 16 | - |
| exon-exon | MAG | 19 | + | NMNAT3 | 3 | - |
| exon-exon | MAG | 19 | + | CD22 | 19 | + |
| exon-exon | MAGEA10 | X | - | MAGEA5 | X | - |
| exon-exon | MAGEA10 | X | - | MAGEA5 | X | - |
| exon-intron | MAGEA2B | X | + | CSAG4 | X | + |
| exon-exon | MAGEA3 | X | + | MAGEA1 | X | + |
| intron-exon | MAGI2 | 7 | + | RPL13AP17 | 7 | + |
| intron-exon | MAGI2 | 7 | + | RPL13AP17 | 7 | + |
| intron-exon | MAGI2 | 7 | - | LOC107985694 | X | - |
| exon-intron | MAGI2 | 7 | - | CTNNA2 | 2 | + |
| intron-exon | MAGI2-AS3 | 7 | - | MAGI2 | 7 | - |
| intron-exon | MAGT1 | X | - | NFIB | 9 | - |
| intron-exon | MAK | 6 | - | TMEM14B | 6 | - |
| intron-exon | MAK | 6 | - | TMEM14B | 6 | - |
| exon-exon | MALAT1 | 11 | + | CLGN | 4 | - |
| exon-intron | MALAT1 | 11 | + | AC244205.1 | 2 | - |
| exon-intron | MALAT1 | 11 | + | ACER3 | 11 | - |
| exon-exon | MALAT1 | 11 | + | RPL13 | 16 | + |
| exon-exon | MALAT1 | 11 | + | TARS1 | 5 | + |
| exon-exon | MALAT1 | 11 | - | RPS6 | 9 | - |
| intron-exon | MAML1 | 5 | - | SOD2 | 6 | - |
| exon-exon | MAN1A1 | 6 | + | RACK1 | 5 | - |
| exon-exon | MAN1A1 | 6 | + | RACK1 | 5 | - |
| intron-exon | MANCR | 10 | + | LINC00705 | 10 | + |
| intron-exon | MAP2K4 | 17 | - | ZNF18 | 17 | - |
| exon-exon | MAP3K12 | 12 | - | PCBP2 | 12 | - |
| exon-exon | MAP3K12 | 12 | - | PCBP2 | 12 | - |
| exon-exon | MAP3K12 | 12 | - | PCBP2 | 12 | - |
| exon-exon | MAP3K12 | 12 | - | PCBP2 | 12 | - |
| exon-exon | MAP3K13 | 3 | + | PRRC2C | 1 | - |
| intron-exon | MAP3K13 | 3 | - | TALAM1 | 11 | - |
| exon-exon | MAP3K20-AS1 | 2 | - | MAP3K20 | 2 | - |
| exon-intron | MAP3K20-AS1 | 2 | - | MAP3K20 | 2 | - |
| exon-intron | MAP3K20-AS1 | 2 | - | TUT1 | 11 | + |
| intron-exon | MAP3K20-AS1 | 2 | - | MAP3K20 | 2 | - |
| intron-exon | MAP3K20-AS1 | 2 | - | MAP3K20 | 2 | - |
| exon-intron | MAP3K5 | 6 | + | MAP3K5-AS1 | 6 | + |
| exon-intron | MAP3K7CL | 21 | - | ABCB4 | 7 | - |
| exon-exon | MAP4K1 | 19 | + | LOC105372397 | 19 | + |
| exon-exon | MAP4K1 | 19 | + | LOC105372397 | 19 | + |
| exon-intron | MAP4K1 | 19 | + | LOC105372397 | 19 | + |
| intron-exon | MAP4K5 | 14 | + | ATL1 | 14 | + |
| intron-exon | MAP4K5 | 14 | + | ATL1 | 14 | + |
| intron-exon | MAP4K5 | 14 | + | ATL1 | 14 | + |
| intron-exon | MAP4K5 | 14 | - | CDKL1 | 14 | - |
| exon-intron | MAP9 | 4 | + | LOC102724776 | 4 | + |
| exon-exon | MAPK1 | 22 | - | RFT1 | 3 | - |
| intron-exon | MAPK10 | 4 | + | MAPK10-AS1 | 4 | + |
| exon-exon | MAPK12 | 22 | - | HDAC10 | 22 | - |
| exon-intron | MAPK1IP1L | 14 | - | GCH1 | 14 | - |
| intron-exon | MAPK7 | 17 | - | B9D1 | 17 | - |
| exon-intron | MAPK7 | 17 | - | B9D1 | 17 | - |
| exon-exon | MAPK7 | 17 | - | B9D1 | 17 | - |
| exon-intron | MAPK8IP1P1 | 17 | - | RPS26P8 | 17 | + |
| intron-exon | MAPK8IP2 | 22 | - | CHKB-CPT1B | 22 | - |
| intron-exon | MAPK8IP3 | 16 | - | ANTXR1 | 2 | + |
| exon-exon | MAPK9 | 5 | + | ITPR1 | 3 | - |
| exon-exon | MAPK9 | 5 | + | ITPR1 | 3 | - |
| intron-exon | MAPKAP1 | 9 | + | LOC105376272 | 9 | + |
| exon-exon | MAPKAPK5-AS1 | 12 | + | MAPKAPK5 | 12 | + |
| exon-exon | MAPRE2 | 18 | - | MAPRE2 | 18 | + |
| intron-exon | MAPT | 17 | - | MAPT-AS1 | 17 | - |
| intron-exon | MAPT | 17 | - | MAPT-AS1 | 17 | - |
| exon-intron | MAPT-AS1 | 17 | + | MAPT | 17 | + |
| exon-intron | MARCHF6 | 5 | + | LOC105376161 | 9 | + |
| intron-exon | MARCHF8 | 10 | - | LRP11 | 6 | + |
| exon-exon | MARCKSL1 | 1 | + | MARCKSL1 | 1 | - |
| exon-intron | MARK3 | 14 | - | CAT | 11 | + |
| exon-exon | MARS1 | 12 | + | DDIT3 | 12 | + |
| intron-exon | MARS1 | 12 | - | ARHGAP9 | 12 | - |
| intron-exon | MAST1 | 19 | - | ZNF490 | 19 | - |
| exon-intron | MAT2A | 2 | + | GGCX | 2 | + |
| exon-exon | MAT2A | 2 | + | LOC100653395 | 3 | + |
| intron-exon | MATN1-AS1 | 1 | - | MATN1 | 1 | - |
| exon-intron | MATR3 | 5 | + | PRKCH | 14 | - |
| exon-exon | MATR3 | 5 | + | MATR3 | 5 | - |
| intron-exon | MATR3 | 5 | - | SIL1 | 5 | - |
| exon-exon | MAU2 | 19 | - | SUGP1 | 19 | - |
| exon-exon | MAU2 | 19 | - | SUGP1 | 19 | - |
| exon-exon | MAX | 14 | + | LOC100506321 | 14 | + |
| intron-exon | MAX | 14 | - | CHURC1-FNTB | 14 | - |
| intron-exon | MAX | 14 | - | CHURC1-FNTB | 14 | - |
| intron-exon | MAX | 14 | - | CHURC1-FNTB | 14 | - |
| exon-exon | MBD6 | 12 | - | DDIT3 | 12 | - |
| intron-exon | MBNL3 | X | - | PNPT1 | 2 | + |
| exon-exon | MBP | 18 | + | N4BP2L2 | 13 | + |
| intron-exon | MBP | 18 | + | LOC105372217 | 18 | + |
| exon-exon | MCAM | 11 | - | CBL | 11 | - |
| intron-exon | MCAM | 11 | - | TMEM41B | 11 | - |
| intron-exon | MCC | 5 | + | LOC107986366 | 5 | + |
| exon-intron | MCCD1 | 6 | + | ATP6V1G2-DDX39B | 6 | + |
| exon-exon | MCL1 | 1 | + | MCL1 | 1 | - |
| exon-intron | MCL1 | 1 | + | LOC112577492 | 1 | + |
| exon-intron | MCL1 | 1 | - | LINC00908 | 18 | + |
| exon-exon | MCL1 | 1 | - | GARS1 | 7 | + |
| exon-exon | MCL1 | 1 | - | GARS1 | 7 | + |
| exon-exon | MCL1 | 1 | - | FTH1 | 11 | - |
| exon-exon | MCM2 | 3 | + | LOC107986126 | 3 | + |
| exon-intron | MCM3AP | 21 | - | MCM3AP-AS1 | 21 | - |
| exon-exon | MCM3AP-AS1 | 21 | + | MCM3AP | 21 | + |
| exon-exon | MCM3AP-AS1 | 21 | + | MCM3AP | 21 | + |
| exon-intron | MCM7 | 7 | + | AP4M1 | 7 | + |
| exon-intron | MCM8 | 20 | + | MCM8-AS1 | 20 | - |
| exon-intron | MCM8 | 20 | + | MCM8-AS1 | 20 | - |
| intron-exon | MCM8-AS1 | 20 | - | MCM8 | 20 | - |
| intron-exon | MCM9 | 6 | + | ASF1A | 6 | + |
| exon-exon | MCOLN1 | 19 | + | PNPLA6 | 19 | + |
| exon-exon | MCPH1-AS1 | 8 | - | MCPH1 | 8 | - |
| intron-exon | MCPH1-AS1 | 8 | - | ANGPT2 | 8 | - |
| intron-exon | MCPH1-AS1 | 8 | - | MCPH1 | 8 | - |
| intron-exon | MCPH1-AS1 | 8 | - | MCPH1 | 8 | - |
| exon-exon | MCTP1 | 5 | - | SLF1 | 5 | - |
| exon-exon | MCTP1 | 5 | - | SLF1 | 5 | - |
| exon-exon | MCTS1 | X | - | PHACTR4 | 1 | - |
| exon-intron | MDC1 | 6 | + | MCM9 | 6 | - |
| exon-exon | MDC1 | 6 | + | MDC1-AS1 | 6 | + |
| exon-exon | MDC1 | 6 | + | MDC1-AS1 | 6 | + |
| exon-intron | MDM2 | 12 | + | ZNF708 | 19 | - |
| exon-intron | MDN1 | 6 | - | LOC101929057 | 6 | - |
| exon-exon | MDP1 | 14 | + | NEDD8 | 14 | + |
| exon-exon | MDP1 | 14 | + | NEDD8 | 14 | + |
| intron-exon | MEA1 | 6 | + | PPP2R5D | 6 | + |
| exon-exon | MEA1 | 6 | + | KLHDC3 | 6 | + |
| intron-exon | MEA1 | 6 | + | KLHDC3 | 6 | + |
| intron-exon | MEAK7 | 16 | + | KLHL36 | 16 | + |
| exon-exon | MEAT6 | 6 | - | DNM1L | 12 | + |
| intron-exon | MED1 | 17 | + | DPYSL3 | 5 | + |
| exon-intron | MED1 | 17 | - | DIAPH3 | 13 | - |
| exon-exon | MED1 | 17 | - | HPCAL4 | 1 | - |
| exon-exon | MED12L | 3 | + | IGSF10 | 3 | + |
| exon-intron | MED17 | 11 | - | C11orf54 | 11 | - |
| exon-intron | MED26 | 19 | - | LOC105372295 | 19 | - |
| exon-intron | MED30 | 8 | - | LOC105375716 | 8 | - |
| exon-intron | MED30 | 8 | - | FXN | 9 | - |
| exon-exon | MED4 | 13 | + | MED4-AS1 | 13 | + |
| intron-exon | MED7 | 5 | - | HAVCR2 | 5 | - |
| exon-exon | MED8 | 1 | - | ELOVL1 | 1 | - |
| exon-exon | MED8-AS1 | 1 | + | MED8 | 1 | + |
| exon-exon | MEF2D | 1 | - | DAZAP1 | 19 | + |
| exon-exon | MEG3 | 14 | - | MEG3 | 14 | + |
| exon-exon | MEG3 | 14 | - | MEG3 | 14 | + |
| exon-intron | MEGF8 | 19 | - | DLG2 | 11 | + |
| exon-intron | MEGF9 | 9 | + | TRAF1 | 9 | + |
| exon-intron | MEIOB | 16 | - | FAHD1 | 16 | - |
| intron-exon | MEIS2 | 15 | + | RNA45SN1 | 21 | - |
| intron-exon | MEIS2 | 15 | + | RNA45SN3 | 21 | - |
| exon-exon | MEPCE | 7 | + | MEPCE | 7 | - |
| exon-exon | MESD | 15 | - | CEMIP | 15 | - |
| exon-exon | MESD | 15 | - | CEMIP | 15 | - |
| exon-exon | MESD | 15 | - | CEMIP | 15 | - |
| exon-intron | METAP2 | 12 | + | NTN4 | 12 | + |
| intron-exon | METTL1 | 12 | + | EEF1AKMT3 | 12 | + |
| exon-exon | METTL16 | 17 | - | LOC284009 | 17 | - |
| exon-intron | METTL17 | 14 | + | CRYL1 | 13 | - |
| intron-exon | METTL21A | 2 | - | CREB1 | 2 | - |
| exon-exon | METTL21C | 13 | - | TPP2 | 13 | - |
| exon-exon | METTL21C | 13 | - | TPP2 | 13 | - |
| exon-exon | METTL21C | 13 | - | TPP2 | 13 | - |
| exon-exon | METTL21C | 13 | - | TPP2 | 13 | - |
| exon-exon | METTL21C | 13 | - | TPP2 | 13 | - |
| exon-exon | METTL21C | 13 | - | TPP2 | 13 | - |
| exon-exon | METTL21C | 13 | - | TPP2 | 13 | - |
| exon-exon | METTL21C | 13 | - | TPP2 | 13 | - |
| exon-exon | METTL21C | 13 | - | TPP2 | 13 | - |
| exon-exon | METTL21C | 13 | - | TPP2 | 13 | - |
| exon-exon | METTL3 | 14 | - | TOX4 | 14 | - |
| exon-exon | METTL3 | 14 | - | TOX4 | 14 | - |
| intron-exon | METTL3 | 14 | - | TOX4 | 14 | - |
| intron-exon | METTL3 | 14 | - | TOX4 | 14 | - |
| exon-exon | METTL5 | 2 | - | SSB | 2 | - |
| intron-exon | METTL5 | 2 | - | SSB | 2 | - |
| intron-exon | METTL5 | 2 | - | SSB | 2 | - |
| intron-exon | METTL5 | 2 | - | SSB | 2 | - |
| exon-exon | METTL5 | 2 | - | SSB | 2 | - |
| exon-intron | METTL5 | 2 | - | SSB | 2 | - |
| exon-intron | METTL7A | 12 | - | LOC102723536 | 16 | - |
| intron-exon | METTL7AP1 | 12 | + | KRT7 | 12 | + |
| exon-exon | METTL7AP1 | 12 | + | KRT7 | 12 | + |
| exon-intron | METTL9 | 16 | - | LOC105376434 | 10 | + |
| exon-intron | METTL9 | 16 | - | LOC105376434 | 10 | + |
| exon-exon | MFAP2 | 1 | + | LOC105376806 | 1 | + |
| exon-exon | MFAP2 | 1 | + | LOC105376806 | 1 | + |
| exon-exon | MFAP2 | 1 | + | LOC105376806 | 1 | + |
| exon-exon | MFAP2 | 1 | + | LOC105376806 | 1 | + |
| exon-exon | MFAP3L | 4 | + | MFAP3L | 4 | - |
| exon-exon | MFAP3L | 4 | - | IBA57-DT | 1 | - |
| exon-exon | MFAP4 | 17 | - | MAPK7 | 17 | - |
| exon-intron | MFN1 | 3 | - | SREBF2 | 22 | - |
| exon-intron | MFN2 | 1 | + | C8orf44-SGK3 | 8 | + |
| exon-exon | MFN2 | 1 | - | MFN2 | 1 | + |
| intron-exon | MFSD11 | 17 | + | LINC02080 | 17 | + |
| intron-exon | MFSD12 | 19 | + | C19orf71 | 19 | + |
| exon-intron | MFSD12 | 19 | + | C19orf71 | 19 | + |
| exon-intron | MFSD12 | 19 | + | C19orf71 | 19 | + |
| exon-exon | MFSD12 | 19 | + | RBFOX2 | 22 | + |
| exon-intron | MFSD13A | 10 | + | ARL3 | 10 | + |
| exon-intron | MFSD14B | 9 | + | PPP1R9A | 7 | + |
| exon-exon | MFSD14C | 9 | + | LOC100132077 | 9 | - |
| exon-exon | MFSD14C | 9 | + | MFSD14C | 9 | - |
| intron-exon | MFSD14C | 9 | - | FMOD | 1 | - |
| intron-exon | MFSD14C | 9 | - | FMOD | 1 | - |
| exon-intron | MFSD2B | 2 | + | FKBP1B | 2 | + |
| intron-exon | MFSD4B | 6 | + | HSCB | 22 | - |
| intron-exon | MFSD4B | 6 | + | HSCB | 22 | - |
| exon-intron | MFSD8 | 4 | + | MPDZ | 9 | - |
| exon-exon | MGAT4A | 2 | - | COA5 | 2 | - |
| exon-exon | MGAT4B | 5 | + | SQSTM1 | 5 | + |
| exon-exon | MGME1 | 20 | - | SNX5 | 20 | - |
| exon-exon | MGME1 | 20 | - | SNX5 | 20 | - |
| exon-exon | MGME1 | 20 | - | SNX5 | 20 | - |
| exon-exon | MGME1 | 20 | - | SNX5 | 20 | - |
| exon-intron | MGME1 | 20 | - | SNX5 | 20 | - |
| exon-intron | MGME1 | 20 | - | SNX5 | 20 | - |
| exon-exon | MGME1 | 20 | - | SNX5 | 20 | - |
| exon-intron | MGME1 | 20 | - | SNX5 | 20 | - |
| exon-intron | MGME1 | 20 | - | SNX5 | 20 | - |
| exon-exon | MGME1 | 20 | - | SNX5 | 20 | - |
| exon-exon | MGME1 | 20 | - | SNX5 | 20 | - |
| exon-exon | MGME1 | 20 | - | SNX5 | 20 | - |
| exon-exon | MGME1 | 20 | - | SNX5 | 20 | - |
| exon-exon | MGME1 | 20 | - | SNX5 | 20 | - |
| exon-exon | MGME1 | 20 | - | SNX5 | 20 | - |
| exon-exon | MGME1 | 20 | - | SNX5 | 20 | - |
| exon-exon | MGME1 | 20 | - | SNX5 | 20 | - |
| exon-exon | MGME1 | 20 | - | SNX5 | 20 | - |
| exon-exon | MGP | 12 | + | C12orf60 | 12 | + |
| exon-intron | MGRN1 | 16 | + | PAX3 | 2 | - |
| exon-exon | MGRN1 | 16 | - | CRIM1 | 2 | - |
| exon-intron | MGST1 | 12 | + | LMO3 | 12 | + |
| exon-intron | MIAT | 22 | + | PALM | 19 | - |
| exon-exon | MICA | 6 | + | MICB | 6 | + |
| intron-exon | MICAL2 | 11 | + | MAD2L1 | 4 | + |
| intron-exon | MICAL3 | 22 | - | PPT1 | 1 | + |
| exon-exon | MICOS10 | 1 | + | MICOS10-NBL1 | 1 | + |
| exon-exon | MICOS10 | 1 | + | MICOS10-NBL1 | 1 | + |
| exon-intron | MICOS10 | 1 | + | MICOS10-NBL1 | 1 | + |
| exon-exon | MICOS10-NBL1 | 1 | + | MICOS10-NBL1 | 1 | + |
| exon-exon | MICOS10-NBL1 | 1 | + | NBL1 | 1 | + |
| exon-exon | MICOS10-NBL1 | 1 | - | MICOS10-NBL1 | 1 | - |
| exon-exon | MICOS10-NBL1 | 1 | - | MICOS10-NBL1 | 1 | - |
| exon-exon | MICOS10-NBL1 | 1 | - | RNA45SN3 | 21 | - |
| intron-exon | MICU1 | 10 | - | SLC6A10PB | 16 | - |
| intron-exon | MICU3 | 8 | + | SLC1A2 | 11 | - |
| exon-exon | MIEN1 | 17 | - | ERBB2 | 17 | - |
| exon-exon | MIER1 | 1 | + | WLS | 1 | - |
| exon-intron | MIER1 | 1 | - | LOC105378776 | 1 | - |
| exon-exon | MIF | 22 | + | TPRKB | 2 | - |
| exon-exon | MIF-AS1 | 22 | + | MIF | 22 | + |
| exon-exon | MINK1 | 17 | + | DAZAP2 | 12 | + |
| exon-exon | MIPOL1 | 14 | + | DGKB | 7 | - |
| intron-exon | MIPOL1 | 14 | + | EIF4G2 | 11 | - |
| intron-exon | MIR100HG | 11 | - | DSC3 | 18 | - |
| exon-intron | MIR12136 | 1 | - | MTCO1P12 | 1 | - |
| exon-intron | MIR202HG | 10 | + | RAB2B | 14 | + |
| exon-exon | MIR29B2CHG | 1 | - | CD37 | 19 | + |
| exon-exon | MIR302CHG | 4 | - | LARP7 | 4 | - |
| exon-exon | MIR302CHG | 4 | - | LARP7 | 4 | - |
| exon-exon | MIR302CHG | 4 | - | LARP7 | 4 | - |
| exon-exon | MIR302CHG | 4 | - | LARP7 | 4 | - |
| intron-exon | MIR302CHG | 4 | - | LARP7 | 4 | - |
| intron-exon | MIR302CHG | 4 | - | LARP7 | 4 | - |
| intron-exon | MIR302CHG | 4 | - | LARP7 | 4 | - |
| intron-exon | MIR302CHG | 4 | - | LARP7 | 4 | - |
| exon-intron | MIR3681HG | 2 | - | LOC105373433 | 2 | - |
| intron-exon | MIR3918 | 6 | - | SYTL3 | 6 | - |
| exon-intron | MIR4435-2HG | 2 | + | LINC01943 | 2 | - |
| exon-intron | MIR4435-2HG | 2 | + | LINC01943 | 2 | - |
| exon-intron | MIR4435-2HG | 2 | - | LPP | 3 | - |
| intron-exon | MIR4638 | 5 | + | TRIM41 | 5 | + |
| exon-exon | MIR497HG | 17 | - | RNASEK-C17orf49 | 17 | - |
| intron-exon | MIR497HG | 17 | - | RNASEK-C17orf49 | 17 | - |
| intron-exon | MIR497HG | 17 | - | RNASEK-C17orf49 | 17 | - |
| intron-exon | MIR497HG | 17 | - | RNASEK-C17orf49 | 17 | - |
| intron-exon | MIR497HG | 17 | - | RNASEK-C17orf49 | 17 | - |
| intron-exon | MIR497HG | 17 | - | LINC02099 | 8 | - |
| intron-exon | MIR497HG | 17 | - | LINC02099 | 8 | - |
| intron-exon | MIR497HG | 17 | - | RNASEK-C17orf49 | 17 | - |
| intron-exon | MIR497HG | 17 | - | RNASEK-C17orf49 | 17 | - |
| intron-exon | MIR7705 | 8 | + | PABPC1 | 8 | + |
| exon-exon | MKNK2 | 19 | + | TOR1AIP2 | 1 | - |
| exon-exon | MKRN1 | 7 | - | PTTG1 | 5 | + |
| exon-intron | MKRN1 | 7 | - | TYW1 | 7 | + |
| exon-exon | MKRN2OS | 3 | - | TSEN2 | 3 | - |
| exon-exon | MLC1 | 22 | + | LOC102724219 | 21 | + |
| exon-exon | MLEC | 12 | + | MLEC | 12 | - |
| exon-exon | MLH3 | 14 | + | EIF2AK1 | 7 | - |
| intron-exon | MLLT10 | 10 | + | EIF3D | 22 | + |
| intron-exon | MLLT10 | 10 | - | SKIDA1 | 10 | - |
| exon-intron | MLX | 17 | + | PSMC3IP | 17 | + |
| exon-intron | MLYCD | 16 | + | LOC105371371 | 16 | + |
| exon-exon | MLYCD | 16 | + | LOC105371371 | 16 | + |
| exon-exon | MMAB | 12 | + | MVK | 12 | + |
| exon-intron | MMACHC | 1 | + | PRDX1 | 1 | + |
| exon-exon | MMADHC-DT | 2 | - | MMADHC | 2 | - |
| exon-exon | MMADHC-DT | 2 | - | MMADHC | 2 | - |
| exon-intron | MMADHC-DT | 2 | - | MMADHC | 2 | - |
| exon-intron | MMADHC-DT | 2 | - | MMADHC | 2 | - |
| exon-exon | MMADHC-DT | 2 | - | MMADHC | 2 | - |
| exon-intron | MMADHC-DT | 2 | - | MMADHC | 2 | - |
| exon-exon | MMADHC-DT | 2 | - | MMADHC | 2 | - |
| intron-exon | MMEL1 | 1 | + | MED29 | 19 | + |
| intron-exon | MMEL1 | 1 | + | MED29 | 19 | + |
| intron-exon | MMEL1 | 1 | - | PRXL2B | 1 | + |
| exon-intron | MMP11 | 22 | + | PDSS2 | 6 | + |
| exon-exon | MMP11 | 22 | - | COX1 | MT | - |
| exon-exon | MMP19 | 12 | - | TMEM198B | 12 | - |
| exon-intron | MMP19 | 12 | - | TMEM198B | 12 | - |
| exon-exon | MMP19 | 12 | - | TMEM198B | 12 | - |
| exon-exon | MMP19 | 12 | - | TMEM198B | 12 | - |
| exon-exon | MMP19 | 12 | - | TMEM198B | 12 | - |
| exon-exon | MMP19 | 12 | - | TMEM198B | 12 | - |
| exon-intron | MMP19 | 12 | - | TMEM198B | 12 | - |
| exon-exon | MMP19 | 12 | - | TMEM198B | 12 | - |
| exon-exon | MMP19 | 12 | - | TMEM198B | 12 | - |
| exon-exon | MMP19 | 12 | - | TMEM198B | 12 | - |
| exon-exon | MMP2 | 16 | + | ZNF169 | 9 | + |
| exon-intron | MMP2 | 16 | - | DNTT | 10 | - |
| intron-exon | MMP24 | 20 | + | CTSS | 1 | + |
| exon-exon | MMP24-AS1-EDEM2 | 20 | + | MMP24-AS1-EDEM2 | 20 | + |
| intron-exon | MMP24-AS1-EDEM2 | 20 | + | PROCR | 20 | + |
| intron-exon | MMP24-AS1-EDEM2 | 20 | + | PROCR | 20 | + |
| exon-exon | MMP24-AS1-EDEM2 | 20 | - | MMP24-AS1-EDEM2 | 20 | - |
| exon-exon | MMP24-AS1-EDEM2 | 20 | - | MMP24-AS1-EDEM2 | 20 | - |
| exon-exon | MMP24-AS1-EDEM2 | 20 | - | MMP24-AS1-EDEM2 | 20 | - |
| exon-exon | MMP24-AS1-EDEM2 | 20 | - | MMP24-AS1-EDEM2 | 20 | - |
| exon-exon | MMP24-AS1-EDEM2 | 20 | - | MMP24-AS1-EDEM2 | 20 | - |
| exon-exon | MMP24-AS1-EDEM2 | 20 | - | MMP24-AS1-EDEM2 | 20 | - |
| exon-exon | MMP24-AS1-EDEM2 | 20 | - | MMP24-AS1-EDEM2 | 20 | - |
| intron-exon | MMP28 | 17 | + | C17orf50 | 17 | + |
| intron-exon | MMRN2 | 10 | + | SNCG | 10 | + |
| intron-exon | MMRN2 | 10 | + | ADIRF | 10 | + |
| intron-exon | MMRN2 | 10 | + | AGAP11 | 10 | + |
| exon-intron | MNS1 | 15 | - | USP12-AS1 | 13 | + |
| exon-intron | MNS1 | 15 | - | TEX9 | 15 | - |
| intron-exon | MOB1B | 4 | + | DCK | 4 | + |
| exon-exon | MOB1B | 4 | + | DCK | 4 | + |
| exon-intron | MOB3A | 19 | + | IZUMO4 | 19 | + |
| exon-intron | MOB3A | 19 | + | IZUMO4 | 19 | + |
| exon-intron | MOB3A | 19 | - | AC020687.1 | 15 | - |
| exon-exon | MOB3C | 1 | - | MKNK1 | 1 | - |
| exon-exon | MOCOS | 18 | - | LOC101927809 | 18 | - |
| exon-exon | MOG | 6 | + | ZFP57 | 6 | + |
| exon-exon | MOGS | 2 | - | HBB | 11 | - |
| intron-exon | MOK | 14 | - | WDR20 | 14 | - |
| intron-exon | MOK | 14 | - | WDR20 | 14 | - |
| intron-exon | MOK | 14 | - | WDR20 | 14 | - |
| exon-exon | MOK | 14 | - | ZNF805 | 19 | + |
| exon-intron | MON1A | 3 | - | LOC102724438 | 3 | - |
| exon-intron | MON1B | 16 | + | SYCE1L | 16 | + |
| intron-exon | MORC2-AS1 | 22 | + | MORC2 | 22 | + |
| exon-intron | MORF4L1 | 15 | + | RAB3GAP2 | 1 | + |
| exon-exon | MORF4L1 | 15 | + | MORF4L1P1 | 1 | + |
| intron-exon | MORF4L2 | X | + | MORF4L2-AS1 | X | + |
| exon-exon | MORF4L2-AS1 | X | - | MORF4L2 | X | - |
| exon-intron | MORF4L2-AS1 | X | - | MORF4L2 | X | - |
| exon-exon | MORF4L2-AS1 | X | - | MORF4L2 | X | - |
| exon-intron | MORN3 | 12 | + | LOC105370034 | 12 | + |
| intron-exon | MPC2 | 1 | + | DCAF6 | 1 | + |
| exon-exon | MPDU1 | 17 | + | SOX15 | 17 | + |
| exon-intron | MPDU1 | 17 | + | FXR2 | 17 | + |
| intron-exon | MPG | 16 | + | NPRL3 | 16 | + |
| exon-intron | MPG | 16 | - | ENTPD6 | 20 | - |
| exon-intron | MPG | 16 | - | ENTPD6 | 20 | - |
| exon-intron | MPG | 16 | - | ENTPD6 | 20 | - |
| intron-exon | MPHOSPH10 | 2 | - | TLE5 | 19 | + |
| intron-exon | MPHOSPH10 | 2 | - | TLE5 | 19 | + |
| intron-exon | MPHOSPH10 | 2 | - | TLE5 | 19 | + |
| intron-exon | MPHOSPH10 | 2 | - | TLE5 | 19 | + |
| intron-exon | MPHOSPH10 | 2 | - | TLE5 | 19 | + |
| intron-exon | MPHOSPH10 | 2 | - | TLE5 | 19 | + |
| intron-exon | MPHOSPH10 | 2 | - | TLE5 | 19 | + |
| intron-exon | MPHOSPH10 | 2 | - | TLE5 | 19 | + |
| intron-exon | MPHOSPH10 | 2 | - | TLE5 | 19 | + |
| intron-exon | MPHOSPH9 | 12 | + | C12orf65 | 12 | + |
| exon-intron | MPIG6B | 6 | + | CLIC1 | 6 | + |
| intron-exon | MPIG6B | 6 | - | LY6G6C | 6 | - |
| intron-exon | MPIG6B | 6 | - | LY6G6C | 6 | - |
| exon-intron | MPLKIP | 7 | - | TARS3 | 15 | + |
| exon-intron | MPO | 17 | + | LOC106694316 | 17 | + |
| exon-intron | MPO | 17 | + | LOC106694316 | 17 | + |
| exon-intron | MPO | 17 | + | LOC106694315 | 17 | + |
| exon-intron | MPO | 17 | + | LOC106694315 | 17 | + |
| exon-intron | MPO | 17 | + | LOC106694315 | 17 | + |
| exon-intron | MPRIP | 17 | + | ZKSCAN7 | 3 | - |
| exon-exon | MPST | 22 | - | WAS | X | + |
| exon-intron | MPV17L | 16 | + | BMERB1 | 16 | + |
| exon-intron | MPV17L | 16 | - | RRN3P1 | 16 | - |
| exon-exon | MRC2 | 17 | + | CDH6 | 5 | + |
| intron-exon | MRE11 | 11 | + | ANKRD49 | 11 | + |
| intron-exon | MRE11 | 11 | + | ANKRD49 | 11 | + |
| intron-exon | MREG | 2 | + | PECR | 2 | + |
| exon-exon | MRM3 | 17 | - | DVL2 | 17 | + |
| intron-exon | MRNIP | 5 | - | SQSTM1 | 5 | - |
| intron-exon | MRNIP | 5 | - | SQSTM1 | 5 | - |
| exon-exon | MRNIP | 5 | - | SQSTM1 | 5 | - |
| exon-exon | MRNIP | 5 | - | SQSTM1 | 5 | - |
| exon-exon | MRNIP | 5 | - | LOC100996419 | 5 | - |
| exon-intron | MROH5 | 8 | + | LOC107983985 | 8 | + |
| exon-intron | MROH7 | 1 | + | TTC4 | 1 | + |
| intron-exon | MROH8 | 20 | - | SAMHD1 | 20 | - |
| exon-exon | MRPL12 | 17 | + | SLC25A10 | 17 | + |
| exon-intron | MRPL12 | 17 | - | AC139530.1 | 17 | - |
| exon-exon | MRPL19 | 2 | + | GCFC2 | 2 | + |
| intron-exon | MRPL20-AS1 | 1 | + | MRPL20 | 1 | + |
| intron-exon | MRPL20-AS1 | 1 | - | CCNL2 | 1 | - |
| intron-exon | MRPL23 | 11 | + | MLLT11 | 1 | - |
| intron-exon | MRPL23 | 11 | + | MLLT11 | 1 | - |
| exon-intron | MRPL24 | 1 | - | EP300 | 22 | - |
| exon-exon | MRPL3 | 3 | - | MRPL3P1 | 13 | - |
| exon-exon | MRPL33 | 2 | + | BABAM2 | 2 | + |
| intron-exon | MRPL34 | 19 | - | ABHD8 | 19 | - |
| intron-exon | MRPL34 | 19 | - | ABHD8 | 19 | - |
| intron-exon | MRPL34 | 19 | - | ABHD8 | 19 | - |
| intron-exon | MRPL34 | 19 | - | ABHD8 | 19 | - |
| intron-exon | MRPL34 | 19 | - | ABHD8 | 19 | - |
| intron-exon | MRPL34 | 19 | - | ABHD8 | 19 | - |
| intron-exon | MRPL34 | 19 | - | ABHD8 | 19 | - |
| intron-exon | MRPL34 | 19 | - | ABHD8 | 19 | - |
| intron-exon | MRPL34 | 19 | - | ABHD8 | 19 | - |
| intron-exon | MRPL34 | 19 | - | ABHD8 | 19 | - |
| intron-exon | MRPL34 | 19 | - | ABHD8 | 19 | - |
| intron-exon | MRPL34 | 19 | - | ABHD8 | 19 | - |
| intron-exon | MRPL34 | 19 | - | ABHD8 | 19 | - |
| intron-exon | MRPL34 | 19 | - | ABHD8 | 19 | - |
| intron-exon | MRPL34 | 19 | - | ABHD8 | 19 | - |
| intron-exon | MRPL34 | 19 | - | ABHD8 | 19 | - |
| intron-exon | MRPL34 | 19 | - | ABHD8 | 19 | - |
| intron-exon | MRPL34 | 19 | - | ABHD8 | 19 | - |
| intron-exon | MRPL34 | 19 | - | ABHD8 | 19 | - |
| intron-exon | MRPL34 | 19 | - | ABHD8 | 19 | - |
| intron-exon | MRPL34 | 19 | - | ABHD8 | 19 | - |
| intron-exon | MRPL34 | 19 | - | ABHD8 | 19 | - |
| intron-exon | MRPL34 | 19 | - | ABHD8 | 19 | - |
| intron-exon | MRPL34 | 19 | - | ABHD8 | 19 | - |
| intron-exon | MRPL34 | 19 | - | ABHD8 | 19 | - |
| intron-exon | MRPL34 | 19 | - | ABHD8 | 19 | - |
| intron-exon | MRPL34 | 19 | - | ABHD8 | 19 | - |
| intron-exon | MRPL34 | 19 | - | ABHD8 | 19 | - |
| intron-exon | MRPL34 | 19 | - | ABHD8 | 19 | - |
| intron-exon | MRPL34 | 19 | - | ABHD8 | 19 | - |
| intron-exon | MRPL34 | 19 | - | ABHD8 | 19 | - |
| intron-exon | MRPL34 | 19 | - | ABHD8 | 19 | - |
| intron-exon | MRPL34 | 19 | - | ABHD8 | 19 | - |
| intron-exon | MRPL34 | 19 | - | ABHD8 | 19 | - |
| intron-exon | MRPL34 | 19 | - | ABHD8 | 19 | - |
| intron-exon | MRPL34 | 19 | - | ABHD8 | 19 | - |
| intron-exon | MRPL34 | 19 | - | ABHD8 | 19 | - |
| intron-exon | MRPL37 | 1 | - | CYB5RL | 1 | - |
| exon-intron | MRPL4 | 19 | + | DNMT3A | 2 | + |
| exon-exon | MRPL40 | 22 | - | HIRA | 22 | - |
| exon-exon | MRPL43 | 10 | + | RTL8C | X | - |
| exon-exon | MRPL43 | 10 | + | RTL8C | X | - |
| exon-intron | MRPL47 | 3 | - | ELF1 | 13 | + |
| exon-exon | MRPL47 | 3 | - | ACTL6A | 3 | - |
| exon-exon | MRPL51 | 12 | - | SPTLC1 | 9 | - |
| exon-intron | MRPS16 | 10 | - | DNAJC9-AS1 | 10 | - |
| exon-intron | MRPS16 | 10 | - | DNAJC9-AS1 | 10 | - |
| exon-exon | MRPS17 | 7 | + | NIPSNAP2 | 7 | + |
| exon-exon | MRPS17 | 7 | - | ZNF713 | 7 | - |
| exon-intron | MRPS18B | 6 | + | BCAS3 | 17 | - |
| exon-exon | MRPS18C | 4 | + | ABRAXAS1 | 4 | + |
| exon-exon | MRPS22 | 3 | + | COPB2 | 3 | + |
| exon-exon | MRPS23 | 17 | - | LOC105371839 | 17 | - |
| exon-exon | MRPS25 | 3 | + | SEC23B | 20 | - |
| intron-exon | MRPS25 | 3 | - | NR2C2 | 3 | - |
| intron-exon | MRPS25 | 3 | - | NR2C2 | 3 | - |
| exon-intron | MRPS27 | 5 | + | REPS1 | 6 | - |
| exon-intron | MRPS27 | 5 | + | PTCD2 | 5 | + |
| exon-exon | MRPS27 | 5 | - | PPP1R26-AS1 | 9 | - |
| exon-exon | MRPS5 | 2 | + | ZNF514 | 2 | + |
| intron-exon | MRPS5 | 2 | + | ZNF514 | 2 | + |
| intron-exon | MRPS9-AS1 | 2 | - | MRPS9 | 2 | - |
| intron-exon | MRPS9-AS1 | 2 | - | MRPS9 | 2 | - |
| intron-exon | MRPS9-AS1 | 2 | - | MRPS9 | 2 | - |
| intron-exon | MRPS9-AS1 | 2 | - | MRPS9 | 2 | - |
| intron-exon | MRPS9-AS1 | 2 | - | MRPS9 | 2 | - |
| intron-exon | MRPS9-AS1 | 2 | - | MRPS9 | 2 | - |
| intron-exon | MRPS9-AS1 | 2 | - | MRPS9 | 2 | - |
| intron-exon | MRPS9-AS1 | 2 | - | MRPS9 | 2 | - |
| intron-exon | MRPS9-AS1 | 2 | - | MRPS9 | 2 | - |
| intron-exon | MRPS9-AS1 | 2 | - | MRPS9 | 2 | - |
| intron-exon | MRPS9-AS1 | 2 | - | MRPS9 | 2 | - |
| intron-exon | MRPS9-AS1 | 2 | - | MRPS9 | 2 | - |
| intron-exon | MRPS9-AS1 | 2 | - | MRPS9 | 2 | - |
| intron-exon | MRPS9-AS1 | 2 | - | MRPS9 | 2 | - |
| intron-exon | MRPS9-AS1 | 2 | - | MRPS9 | 2 | - |
| intron-exon | MRPS9-AS1 | 2 | - | MRPS9 | 2 | - |
| intron-exon | MRPS9-AS1 | 2 | - | MRPS9 | 2 | - |
| intron-exon | MRPS9-AS1 | 2 | - | MRPS9 | 2 | - |
| intron-exon | MRPS9-AS1 | 2 | - | MRPS9 | 2 | - |
| exon-exon | MRRF | 9 | - | RBM18 | 9 | - |
| exon-exon | MRRF | 9 | - | RBM18 | 9 | - |
| exon-exon | MRRF | 9 | - | RBM18 | 9 | - |
| exon-intron | MRS2 | 6 | + | GPLD1 | 6 | + |
| exon-intron | MRS2 | 6 | + | GPLD1 | 6 | + |
| exon-intron | MRTFA | 22 | - | CD9 | 12 | - |
| intron-exon | MRTO4 | 1 | - | EMC1 | 1 | - |
| exon-exon | MS4A6E | 11 | + | MS4A14 | 11 | + |
| exon-exon | MSANTD3 | 9 | + | TMEFF1 | 9 | + |
| exon-exon | MSC-AS1 | 8 | + | TRPA1 | 8 | + |
| exon-exon | MSH3 | 5 | - | DHFR | 5 | - |
| exon-exon | MSH5 | 6 | + | SAPCD1 | 6 | + |
| exon-exon | MSH5 | 6 | + | SAPCD1 | 6 | + |
| exon-exon | MSH5-SAPCD1 | 6 | + | MSH5-SAPCD1 | 6 | + |
| exon-exon | MSH5-SAPCD1 | 6 | + | VWA7 | 6 | + |
| exon-exon | MSH5-SAPCD1 | 6 | + | VWA7 | 6 | + |
| exon-exon | MSH5-SAPCD1 | 6 | + | VWA7 | 6 | + |
| intron-exon | MSH6 | 2 | + | FBXO11 | 2 | + |
| exon-intron | MSH6 | 2 | + | FBXO11 | 2 | + |
| intron-exon | MSMB | 10 | - | NCOA4 | 10 | - |
| intron-exon | MSMB | 10 | - | NCOA4 | 10 | - |
| intron-exon | MSMB | 10 | - | NCOA4 | 10 | - |
| intron-exon | MSMB | 10 | - | NCOA4 | 10 | - |
| exon-exon | MSMB | 10 | - | NCOA4 | 10 | - |
| exon-exon | MSMB | 10 | - | NCOA4 | 10 | - |
| exon-exon | MSMB | 10 | - | NCOA4 | 10 | - |
| exon-exon | MSMB | 10 | - | NCOA4 | 10 | - |
| intron-exon | MSMP | 9 | + | RGP1 | 9 | + |
| intron-exon | MST1 | 3 | - | COL2A1 | 12 | - |
| intron-exon | MST1 | 3 | - | COL2A1 | 12 | - |
| intron-exon | MST1 | 3 | - | COL2A1 | 12 | - |
| intron-exon | MST1 | 3 | - | COL2A1 | 12 | - |
| exon-intron | MST1R | 3 | + | LOC102724438 | 3 | + |
| exon-exon | MSTO2P | 1 | - | COX1 | MT | - |
| exon-intron | MT1E | 16 | + | GABRA3 | X | + |
| intron-exon | MT1X | 16 | + | DPPA2P4 | 16 | + |
| exon-intron | MT3 | 16 | + | PPP2R5E | 14 | - |
| exon-exon | MTAP | 9 | + | CDKN2B-AS1 | 9 | + |
| exon-exon | MTAP | 9 | + | CDKN2B-AS1 | 9 | + |
| exon-exon | MTAP | 9 | + | CDKN2B-AS1 | 9 | + |
| intron-exon | MTATP6P1 | 1 | - | ATP6 | MT | + |
| intron-exon | MTATP6P1 | 1 | - | PDZK1IP1 | 1 | - |
| intron-exon | MTATP8P1 | 1 | + | ATP6 | MT | + |
| exon-intron | MTCH1 | 6 | - | CAMK1 | 3 | - |
| intron-exon | MTCO2P12 | 1 | - | COX2 | MT | - |
| intron-exon | MTCP1 | X | - | CMC4 | X | - |
| intron-exon | MTCP1 | X | - | CMC4 | X | - |
| exon-exon | MTERF2 | 12 | - | TMEM263 | 12 | - |
| exon-exon | MTERF2 | 12 | - | TMEM263 | 12 | - |
| exon-exon | MTERF2 | 12 | - | TMEM263 | 12 | - |
| exon-exon | MTERF2 | 12 | - | TMEM263 | 12 | - |
| exon-intron | MTFR1L | 1 | + | TSC22D1 | 13 | + |
| exon-intron | MTFR1L | 1 | - | SELENON | 1 | - |
| exon-exon | MTHFD1 | 14 | + | ZBTB25 | 14 | + |
| exon-exon | MTHFD1 | 14 | + | ZBTB25 | 14 | + |
| exon-exon | MTHFD2 | 2 | + | SLC4A5 | 2 | + |
| exon-intron | MTIF2 | 2 | - | RNFT1 | 17 | + |
| exon-intron | MTMR1 | X | - | MTMR1 | X | + |
| exon-exon | MTMR3 | 22 | + | APOH | 17 | - |
| exon-exon | MTMR7 | 8 | - | VPS37A | 8 | - |
| exon-exon | MTMR9 | 8 | + | MTMR9 | 8 | - |
| intron-exon | MTND1P23 | 1 | - | DMXL2 | 15 | + |
| exon-exon | MTNR1A | 4 | - | F11-AS1 | 4 | - |
| intron-exon | MTO1 | 6 | + | EEF1A1 | 6 | + |
| exon-exon | MTOR | 1 | + | MTOR-AS1 | 1 | + |
| exon-exon | MTPAP | 10 | - | GOLGA2P6 | 10 | - |
| exon-exon | MTPAP | 10 | - | GOLGA2P6 | 10 | - |
| exon-exon | MTPAP | 10 | - | GOLGA2P6 | 10 | - |
| exon-exon | MTPAP | 10 | - | GOLGA2P6 | 10 | - |
| exon-exon | MTPAP | 10 | - | GOLGA2P6 | 10 | - |
| exon-exon | MTPAP | 10 | - | GOLGA2P6 | 10 | - |
| exon-exon | MTPAP | 10 | - | GOLGA2P6 | 10 | - |
| exon-exon | MTPAP | 10 | - | GOLGA2P6 | 10 | - |
| exon-exon | MTPAP | 10 | - | GOLGA2P6 | 10 | - |
| exon-exon | MTPAP | 10 | - | GOLGA2P6 | 10 | - |
| exon-exon | MTPAP | 10 | - | GOLGA2P6 | 10 | - |
| exon-exon | MTPAP | 10 | - | GOLGA2P6 | 10 | - |
| exon-exon | MTPAP | 10 | - | GOLGA2P6 | 10 | - |
| exon-exon | MTPAP | 10 | - | GOLGA2P6 | 10 | - |
| exon-exon | MTPAP | 10 | - | GOLGA2P6 | 10 | - |
| exon-exon | MTPAP | 10 | - | GOLGA2P6 | 10 | - |
| exon-exon | MTPAP | 10 | - | GOLGA2P6 | 10 | - |
| exon-exon | MTPAP | 10 | - | GOLGA2P6 | 10 | - |
| exon-exon | MTPAP | 10 | - | GOLGA2P6 | 10 | - |
| exon-exon | MTPAP | 10 | - | GOLGA2P6 | 10 | - |
| exon-exon | MTPAP | 10 | - | GOLGA2P6 | 10 | - |
| exon-exon | MTPAP | 10 | - | GOLGA2P6 | 10 | - |
| exon-exon | MTPAP | 10 | - | GOLGA2P6 | 10 | - |
| exon-exon | MTPAP | 10 | - | GOLGA2P6 | 10 | - |
| exon-exon | MTPAP | 10 | - | GOLGA2P6 | 10 | - |
| exon-exon | MTPAP | 10 | - | GOLGA2P6 | 10 | - |
| exon-exon | MTPAP | 10 | - | GOLGA2P6 | 10 | - |
| intron-exon | MTPAP | 10 | - | GOLGA2P6 | 10 | - |
| intron-exon | MTPAP | 10 | - | GOLGA2P6 | 10 | - |
| exon-exon | MTPN | 7 | + | LUZP6 | 7 | + |
| exon-exon | MTPN | 7 | + | LUZP6 | 7 | + |
| exon-exon | MTPN | 7 | + | LUZP6 | 7 | + |
| exon-exon | MTPN | 7 | + | LUZP6 | 7 | + |
| exon-exon | MTPN | 7 | + | LUZP6 | 7 | + |
| intron-exon | MTPN | 7 | - | LUZP6 | 7 | - |
| intron-exon | MTPN | 7 | - | LUZP6 | 7 | - |
| intron-exon | MTPN | 7 | - | LUZP6 | 7 | - |
| intron-exon | MTPN | 7 | - | LUZP6 | 7 | - |
| exon-exon | MTR | 1 | + | CCAR1 | 10 | - |
| exon-intron | MTRF1L | 6 | - | AL080276.2 | 6 | - |
| exon-exon | MTRF1L | 6 | - | LOC285442 | 4 | + |
| exon-exon | MTRR | 5 | - | C5orf49 | 5 | - |
| exon-intron | MTX2 | 2 | + | SH3PXD2B | 5 | + |
| exon-exon | MUC1 | 1 | - | LGALS4 | 19 | - |
| exon-exon | MUC12 | 7 | - | CEACAM5 | 19 | - |
| exon-intron | MUC15 | 11 | - | ANO3 | 11 | - |
| exon-intron | MUC15 | 11 | - | ANO3 | 11 | - |
| exon-exon | MUC16 | 19 | - | MUC16 | 19 | + |
| exon-exon | MUC4 | 3 | - | MAGEF1 | 3 | - |
| intron-exon | MUC4 | 3 | - | ACAP2 | 3 | - |
| intron-exon | MUS81 | 11 | + | EFEMP2 | 11 | + |
| exon-intron | MUS81 | 11 | + | MAGT1 | X | + |
| intron-exon | MUS81 | 11 | + | EFEMP2 | 11 | + |
| intron-exon | MUS81 | 11 | + | EFEMP2 | 11 | + |
| intron-exon | MUS81 | 11 | + | EFEMP2 | 11 | + |
| exon-exon | MUS81 | 11 | - | CFL1 | 11 | - |
| exon-exon | MUS81 | 11 | - | CFL1 | 11 | - |
| intron-exon | MUSK | 9 | - | SVIP | 11 | - |
| exon-exon | MUSTN1 | 3 | + | STIMATE | 3 | + |
| exon-exon | MVP | 16 | - | PAGR1 | 16 | - |
| exon-exon | MXD3 | 5 | + | LMAN2 | 5 | + |
| exon-exon | MXD3 | 5 | - | PRELID1 | 5 | - |
| exon-exon | MXD3 | 5 | - | PRELID1 | 5 | - |
| exon-exon | MXD3 | 5 | - | PRELID1 | 5 | - |
| exon-exon | MXD3 | 5 | - | PRELID1 | 5 | - |
| exon-exon | MXD3 | 5 | - | PRELID1 | 5 | - |
| exon-exon | MXD3 | 5 | - | PRELID1 | 5 | - |
| exon-exon | MXD3 | 5 | - | PRELID1 | 5 | - |
| exon-exon | MXD3 | 5 | - | PRELID1 | 5 | - |
| exon-exon | MXD3 | 5 | - | PRELID1 | 5 | - |
| exon-exon | MXD3 | 5 | - | PRELID1 | 5 | - |
| exon-exon | MXD3 | 5 | - | PRELID1 | 5 | - |
| exon-exon | MXD3 | 5 | - | PRELID1 | 5 | - |
| exon-exon | MXD3 | 5 | - | PRELID1 | 5 | - |
| exon-exon | MXD3 | 5 | - | PRELID1 | 5 | - |
| exon-exon | MXD3 | 5 | - | PRELID1 | 5 | - |
| exon-exon | MXD3 | 5 | - | PRELID1 | 5 | - |
| exon-exon | MXD3 | 5 | - | PRELID1 | 5 | - |
| exon-exon | MXD3 | 5 | - | PRELID1 | 5 | - |
| exon-exon | MXD3 | 5 | - | PRELID1 | 5 | - |
| exon-exon | MXD3 | 5 | - | PRELID1 | 5 | - |
| exon-exon | MXD3 | 5 | - | PRELID1 | 5 | - |
| exon-exon | MXD3 | 5 | - | PRELID1 | 5 | - |
| exon-exon | MXD3 | 5 | - | PRELID1 | 5 | - |
| exon-exon | MXD3 | 5 | - | PRELID1 | 5 | - |
| exon-exon | MXD3 | 5 | - | PRELID1 | 5 | - |
| exon-exon | MXD3 | 5 | - | PRELID1 | 5 | - |
| exon-exon | MXD3 | 5 | - | PRELID1 | 5 | - |
| exon-exon | MXD3 | 5 | - | PRELID1 | 5 | - |
| exon-exon | MXD3 | 5 | - | PRELID1 | 5 | - |
| exon-exon | MXD3 | 5 | - | PRELID1 | 5 | - |
| exon-exon | MXD3 | 5 | - | PRELID1 | 5 | - |
| exon-exon | MXD3 | 5 | - | PRELID1 | 5 | - |
| exon-exon | MXD3 | 5 | - | PRELID1 | 5 | - |
| exon-exon | MXD3 | 5 | - | PRELID1P6 | 2 | + |
| exon-exon | MXD3 | 5 | - | PRELID1P6 | 2 | + |
| exon-exon | MXD3 | 5 | - | PRELID1 | 5 | - |
| exon-exon | MXD3 | 5 | - | PRELID1 | 5 | - |
| exon-exon | MXD3 | 5 | - | PRELID1 | 5 | - |
| exon-exon | MXD3 | 5 | - | PRELID1 | 5 | - |
| exon-exon | MXD3 | 5 | - | PRELID1 | 5 | - |
| exon-exon | MXD3 | 5 | - | PRELID1 | 5 | - |
| intron-exon | MXD3 | 5 | - | RAB24 | 5 | - |
| exon-exon | MXD3 | 5 | - | RAB24 | 5 | - |
| exon-exon | MXD3 | 5 | - | RAB24 | 5 | - |
| exon-exon | MXRA7 | 17 | + | SILC1 | 2 | - |
| exon-exon | MYADML2 | 17 | - | PYCR1 | 17 | - |
| exon-exon | MYBBP1A | 17 | - | SPNS2 | 17 | - |
| exon-exon | MYBBP1A | 17 | - | SPNS2 | 17 | - |
| exon-exon | MYBBP1A | 17 | - | SPNS2 | 17 | - |
| exon-exon | MYBPC1 | 12 | - | SLC22A11 | 11 | - |
| exon-exon | MYCBP | 1 | + | GJA9 | 1 | + |
| exon-exon | MYCBP | 1 | + | GJA9 | 1 | + |
| intron-exon | MYCNOS | 2 | + | MYCN | 2 | + |
| exon-exon | MYD88 | 3 | + | MYLK | 3 | - |
| exon-exon | MYD88 | 3 | - | ARHGEF10L | 1 | - |
| exon-intron | MYEF2 | 15 | - | GLE1 | 9 | + |
| exon-intron | MYEOV | 11 | + | LOC105369370 | 11 | + |
| intron-exon | MYG1 | 12 | - | MYG1-AS1 | 12 | - |
| exon-exon | MYG1-AS1 | 12 | - | PFDN5 | 12 | - |
| exon-exon | MYG1-AS1 | 12 | - | PFDN5 | 12 | - |
| exon-exon | MYG1-AS1 | 12 | - | PFDN5 | 12 | - |
| exon-exon | MYG1-AS1 | 12 | - | PFDN5 | 12 | - |
| exon-intron | MYG1-AS1 | 12 | - | PFDN5 | 12 | - |
| exon-exon | MYG1-AS1 | 12 | - | PFDN5 | 12 | - |
| exon-exon | MYG1-AS1 | 12 | - | PFDN5 | 12 | - |
| exon-exon | MYG1-AS1 | 12 | - | PFDN5 | 12 | - |
| exon-exon | MYG1-AS1 | 12 | - | PFDN5 | 12 | - |
| exon-exon | MYG1-AS1 | 12 | - | PFDN5 | 12 | - |
| exon-exon | MYG1-AS1 | 12 | - | PFDN5 | 12 | - |
| exon-exon | MYG1-AS1 | 12 | - | PFDN5 | 12 | - |
| exon-exon | MYG1-AS1 | 12 | - | PFDN5 | 12 | - |
| exon-exon | MYH10 | 17 | + | ARHGEF10L | 1 | - |
| exon-intron | MYH11 | 16 | - | TECPR2 | 14 | - |
| exon-intron | MYH11 | 16 | - | TUBGCP3 | 13 | + |
| intron-exon | MYH14 | 19 | - | SIGLEC16 | 19 | - |
| intron-exon | MYH14 | 19 | - | TBC1D17 | 19 | - |
| intron-exon | MYH2 | 17 | - | MYH1 | 17 | - |
| exon-exon | MYH7 | 14 | + | MHRT | 14 | + |
| exon-exon | MYH7 | 14 | - | MYH6 | 14 | - |
| exon-intron | MYH9 | 22 | - | CHCHD3 | 7 | - |
| exon-exon | MYL12A | 18 | - | S100A11 | 1 | - |
| exon-intron | MYL12B | 18 | + | MYL12B | 18 | - |
| exon-intron | MYL2 | 12 | + | LOC114827850 | 12 | + |
| exon-intron | MYL5 | 4 | - | ATP5ME | 4 | - |
| exon-exon | MYL5 | 4 | - | ATP5ME | 4 | - |
| exon-exon | MYL5 | 4 | - | ATP5ME | 4 | - |
| exon-exon | MYL5 | 4 | - | ATP5ME | 4 | - |
| exon-exon | MYL5 | 4 | - | ATP5ME | 4 | - |
| exon-exon | MYL6 | 12 | + | SMARCC2 | 12 | + |
| exon-exon | MYL6B | 12 | + | MYL6 | 12 | + |
| exon-exon | MYL6B | 12 | + | MYL6 | 12 | + |
| intron-exon | MYLK | 3 | + | BROX | 1 | + |
| exon-intron | MYLK | 3 | + | LOC105369194 | 3 | + |
| intron-exon | MYLK | 3 | - | MYLK-AS1 | 3 | - |
| intron-exon | MYLK | 3 | - | MYLK-AS1 | 3 | - |
| intron-exon | MYLK | 3 | - | MYLK-AS1 | 3 | - |
| exon-exon | MYLK-AS1 | 3 | + | MYLK | 3 | + |
| exon-exon | MYLK-AS1 | 3 | + | MYLK | 3 | + |
| exon-intron | MYLPF | 16 | - | LOC112268284 | 21 | - |
| exon-exon | MYO18A | 17 | + | MYO18A | 17 | - |
| intron-exon | MYO18B | 22 | - | FTL | 19 | - |
| intron-exon | MYO1D | 17 | + | LZTS3 | 20 | - |
| exon-intron | MYO1H | 12 | + | KCTD10 | 12 | + |
| exon-exon | MYO5B | 18 | - | ACAA2 | 18 | - |
| exon-exon | MYO5B | 18 | - | ACAA2 | 18 | - |
| exon-exon | MYO5B | 18 | - | ACAA2 | 18 | - |
| exon-exon | MYO5B | 18 | - | ACAA2 | 18 | - |
| exon-exon | MYO5B | 18 | - | ACAA2 | 18 | - |
| exon-exon | MYO5B | 18 | - | ACAA2 | 18 | - |
| exon-exon | MYO5B | 18 | - | ACAA2 | 18 | - |
| exon-intron | MYO9A | 15 | - | NVL | 1 | - |
| intron-exon | MYOM1 | 18 | + | LOC101927044 | 18 | + |
| exon-intron | MYOM2 | 8 | + | LOC105377781 | 8 | + |
| exon-exon | MZB1 | 5 | + | ACTN4 | 19 | + |
| exon-exon | MZF1-AS1 | 19 | + | CENPBD1P1 | 19 | + |
| intron-exon | MZT2A | 2 | + | TUBA3E | 2 | - |
| intron-exon | MZT2A | 2 | + | TUBA3D | 2 | + |
| exon-exon | MZT2B | 2 | - | SMPD4 | 2 | - |
| intron-exon | Metazoa_SRP | 15 | + | NEIL1 | 15 | + |
| intron-exon | N4BP2 | 4 | + | N4BP2 | 4 | - |
| exon-exon | N4BP2L1 | 13 | + | N4BP2L1 | 13 | - |
| exon-exon | NAA10 | X | - | ZDHHC16 | 10 | - |
| intron-exon | NAA11 | 4 | - | LINC01088 | 4 | - |
| intron-exon | NAA11 | 4 | - | LINC01088 | 4 | - |
| intron-exon | NAA11 | 4 | - | LINC01088 | 4 | - |
| intron-exon | NAA15 | 4 | + | LOC105377449 | 4 | + |
| intron-exon | NAA15 | 4 | + | RAB33B | 4 | + |
| exon-intron | NAA35 | 9 | + | SEPTIN3 | 22 | + |
| exon-intron | NAA38 | 17 | + | LOC112533665 | 17 | + |
| intron-exon | NAA38 | 17 | + | CYB5D1 | 17 | + |
| intron-exon | NAA38 | 17 | + | CYB5D1 | 17 | + |
| intron-exon | NAALADL2 | 3 | + | LYZ | 12 | + |
| exon-intron | NAALADL2-AS2 | 3 | - | NAALADL2 | 3 | - |
| exon-intron | NAB2 | 12 | + | STAT6 | 12 | + |
| exon-exon | NABP2 | 12 | + | DVL3 | 3 | + |
| exon-intron | NACA | 12 | + | TPST2 | 22 | - |
| exon-intron | NACA | 12 | - | LOC101928149 | 2 | + |
| exon-exon | NACAD | 7 | - | RPS6 | 9 | - |
| exon-exon | NAGPA-AS1 | 16 | - | NAGPA | 16 | - |
| exon-intron | NAIP | 5 | - | LOC107986356 | 5 | + |
| exon-intron | NANOGNB | 12 | + | ATXN1 | 6 | - |
| intron-exon | NANOS3 | 19 | - | LOC107985334 | 19 | - |
| exon-exon | NAP1L1 | 12 | - | RBM33 | 7 | + |
| exon-intron | NARS2 | 11 | + | LOC105369403 | 11 | + |
| exon-intron | NAT14 | 19 | + | SIPA1L1 | 14 | - |
| exon-intron | NAT8 | 2 | + | ALMS1P1 | 2 | + |
| intron-exon | NBEAP3 | 22 | - | LINC01297-DUXAP10-NBEAP6 | 14 | + |
| intron-exon | NBPF10 | 1 | + | NOTCH2NLC | 1 | - |
| exon-exon | NBPF10 | 1 | - | NBPF26 | 1 | + |
| intron-exon | NBPF11 | 1 | + | PFN1P4 | 1 | + |
| exon-exon | NBPF14 | 1 | - | NBPF11 | 1 | - |
| exon-exon | NBPF25P | 1 | - | NBPF20 | 1 | - |
| intron-exon | NBPF25P | 1 | - | NBPF20 | 1 | - |
| exon-exon | NBPF25P | 1 | - | NBPF20 | 1 | - |
| exon-exon | NBPF25P | 1 | - | NBPF20 | 1 | - |
| intron-exon | NBPF25P | 1 | - | NBPF20 | 1 | - |
| exon-intron | NBPF25P | 1 | - | NBPF20 | 1 | - |
| exon-exon | NBPF8 | 1 | + | NBPF26 | 1 | + |
| exon-exon | NBPF8 | 1 | + | NBPF26 | 1 | + |
| exon-exon | NBPF8 | 1 | + | NBPF19 | 1 | + |
| exon-exon | NBPF8 | 1 | + | NBPF26 | 1 | + |
| exon-exon | NBR2 | 17 | + | NBR1 | 17 | + |
| exon-exon | NBR2 | 17 | + | NBR1 | 17 | + |
| intron-exon | NBR2 | 17 | - | NBR2 | 17 | + |
| intron-exon | NCAM1-AS1 | 11 | - | NCAM1 | 11 | - |
| intron-exon | NCAM2 | 21 | - | ILF2 | 1 | - |
| exon-exon | NCAPD2 | 12 | - | MRPL51 | 12 | - |
| exon-exon | NCAPD2 | 12 | - | MRPL51 | 12 | - |
| intron-exon | NCAPD3 | 11 | + | VPS26B | 11 | + |
| exon-exon | NCAPD3 | 11 | - | JAM3 | 11 | - |
| exon-exon | NCAPH2 | 22 | - | SCO2 | 22 | - |
| exon-exon | NCBP1 | 9 | - | TSTD2 | 9 | - |
| exon-exon | NCBP1 | 9 | - | TSTD2 | 9 | - |
| exon-exon | NCBP1 | 9 | - | TSTD2 | 9 | - |
| exon-intron | NCBP2 | 3 | - | SMCO1 | 3 | - |
| exon-intron | NCBP2 | 3 | - | PRKG2-AS1 | 4 | + |
| exon-intron | NCBP2 | 3 | - | WDFY2 | 13 | + |
| exon-exon | NCBP3 | 17 | - | LRPAP1 | 4 | - |
| exon-exon | NCBP3 | 17 | - | LRPAP1 | 4 | - |
| exon-exon | NCDN | 1 | - | KIAA0319L | 1 | - |
| exon-exon | NCF1C | 7 | + | NCF1B | 7 | - |
| intron-exon | NCF1C | 7 | - | TRIM74 | 7 | - |
| exon-intron | NCKAP1 | 2 | - | RP11-106M3.2 | 15 | - |
| intron-exon | NCKAP5 | 2 | + | NCKAP5-AS2 | 2 | + |
| exon-intron | NCL | 2 | + | LOC114004369 | 2 | + |
| exon-intron | NCL | 2 | + | LOC114004369 | 2 | + |
| exon-intron | NCL | 2 | + | LOC114004369 | 2 | + |
| exon-exon | NCMAP-DT | 1 | - | RCAN3 | 1 | - |
| intron-exon | NCOA2 | 8 | + | BTF3P12 | 8 | + |
| exon-exon | NCOA4 | 10 | + | MSMB | 10 | + |
| exon-exon | NCOA4 | 10 | + | MSMB | 10 | + |
| exon-exon | NCOA5 | 20 | - | RBFOX2 | 22 | + |
| exon-exon | NCOA6 | 20 | - | SPG21 | 15 | - |
| exon-intron | NCOR1 | 17 | + | PIGL | 17 | + |
| intron-exon | NCOR1 | 17 | - | TTC19 | 17 | - |
| intron-exon | NCOR2 | 12 | + | APLP2 | 11 | - |
| exon-exon | NCSTN | 1 | + | NCSTN | 1 | - |
| exon-exon | ND1 | MT | + | SNHG19 | 16 | - |
| exon-intron | ND1 | MT | - | RNR2 | MT | - |
| exon-intron | ND1 | MT | - | RNR2 | MT | - |
| exon-intron | ND1 | MT | - | RNR2 | MT | - |
| exon-intron | ND1 | MT | - | RNR2 | MT | - |
| exon-intron | ND1 | MT | - | RNR2 | MT | - |
| exon-intron | ND1 | MT | - | RNR2 | MT | - |
| exon-intron | ND1 | MT | - | RNR2 | MT | - |
| exon-intron | ND1 | MT | - | RNR2 | MT | - |
| exon-intron | ND1 | MT | - | RNR2 | MT | - |
| exon-intron | ND1 | MT | - | RNR2 | MT | - |
| exon-intron | ND1 | MT | - | RNR2 | MT | - |
| exon-intron | ND1 | MT | - | RNR2 | MT | - |
| exon-intron | ND1 | MT | - | RNR2 | MT | - |
| exon-intron | ND1 | MT | - | RNR2 | MT | - |
| exon-intron | ND1 | MT | - | RNR2 | MT | - |
| exon-intron | ND1 | MT | - | RNR2 | MT | - |
| exon-intron | ND1 | MT | - | RNR2 | MT | - |
| exon-intron | ND1 | MT | - | RNR2 | MT | - |
| exon-intron | ND1 | MT | - | RNR2 | MT | - |
| exon-intron | ND1 | MT | - | RNR2 | MT | - |
| exon-intron | ND1 | MT | - | RNR2 | MT | - |
| exon-exon | ND1 | MT | - | ND2 | MT | + |
| exon-intron | ND1 | MT | - | RNR2 | MT | - |
| exon-intron | ND1 | MT | - | RNR2 | MT | - |
| exon-intron | ND1 | MT | - | PAN3 | 13 | + |
| exon-exon | ND1 | MT | - | RUSC2 | 9 | - |
| exon-exon | ND2 | MT | + | ND2 | MT | - |
| exon-intron | ND2 | MT | + | MTND2P28 | 1 | + |
| exon-exon | ND2 | MT | + | FAR2P2 | 2 | - |
| exon-intron | ND2 | MT | - | SCOC | 4 | + |
| exon-exon | ND2 | MT | - | ND2 | MT | + |
| exon-exon | ND2 | MT | - | ATP6V0A1 | 17 | + |
| exon-exon | ND2 | MT | - | ND2 | MT | + |
| exon-exon | ND2 | MT | - | MAGOH | 1 | - |
| exon-exon | ND3 | MT | + | ND5 | MT | + |
| exon-intron | ND3 | MT | + | LOC107985960 | 2 | + |
| exon-exon | ND3 | MT | - | SMC5 | 9 | - |
| exon-exon | ND4 | MT | + | ND5 | MT | + |
| exon-intron | ND4 | MT | + | CEACAM6 | 19 | - |
| exon-intron | ND4 | MT | + | RNR2 | MT | + |
| exon-intron | ND4 | MT | - | ND4L | MT | - |
| exon-exon | ND4 | MT | - | ND4L | MT | - |
| exon-exon | ND4 | MT | - | ND4L | MT | - |
| exon-exon | ND4 | MT | - | ND4L | MT | - |
| exon-exon | ND4 | MT | - | ND4L | MT | - |
| exon-exon | ND4 | MT | - | ND4L | MT | - |
| exon-exon | ND4 | MT | - | ND4L | MT | - |
| exon-exon | ND4 | MT | - | ND4L | MT | - |
| exon-intron | ND4 | MT | - | SLA | 8 | - |
| exon-exon | ND4 | MT | - | ROBO3 | 11 | - |
| exon-exon | ND4 | MT | - | ND4L | MT | - |
| exon-exon | ND4 | MT | - | ND4L | MT | - |
| exon-exon | ND4 | MT | - | ND5 | MT | - |
| exon-intron | ND4 | MT | - | NAA20 | 20 | + |
| exon-intron | ND4 | MT | - | HBP1 | 7 | + |
| exon-exon | ND4 | MT | - | CD24 | 6 | - |
| exon-intron | ND4L | MT | + | ND4 | MT | + |
| exon-exon | ND4L | MT | + | CYTB | MT | + |
| exon-intron | ND4L | MT | + | ND4 | MT | + |
| exon-exon | ND4L | MT | + | ND4 | MT | + |
| exon-intron | ND4L | MT | + | ND4 | MT | + |
| exon-intron | ND4L | MT | + | ND4 | MT | + |
| exon-intron | ND4L | MT | + | ND4 | MT | + |
| exon-intron | ND4L | MT | + | ND4 | MT | + |
| exon-intron | ND4L | MT | + | ND4 | MT | + |
| exon-intron | ND4L | MT | + | ND4 | MT | + |
| exon-intron | ND4L | MT | + | ND4 | MT | + |
| exon-exon | ND4L | MT | - | CD164 | 6 | + |
| exon-intron | ND5 | MT | + | ANKRD34B | 5 | - |
| exon-exon | ND5 | MT | + | RNA45SN2 | 21 | + |
| exon-exon | ND5 | MT | + | ND6 | MT | + |
| exon-exon | ND5 | MT | - | TPM1 | 15 | + |
| exon-exon | ND5 | MT | - | TPM1 | 15 | + |
| exon-intron | ND6 | MT | + | L2HGDH | 14 | - |
| exon-exon | ND6 | MT | - | ND5 | MT | - |
| exon-exon | ND6 | MT | - | ND5 | MT | - |
| exon-exon | ND6 | MT | - | ND5 | MT | - |
| exon-exon | ND6 | MT | - | ND5 | MT | - |
| exon-exon | ND6 | MT | - | ND5 | MT | - |
| exon-exon | ND6 | MT | - | ND5 | MT | - |
| exon-intron | ND6 | MT | - | HNRNPD | 4 | - |
| intron-exon | ND6 | MT | - | COX1 | MT | - |
| exon-intron | NDC1 | 1 | - | AC097518.2 | 4 | - |
| exon-exon | NDE1 | 16 | + | RN7SK | 6 | - |
| exon-intron | NDEL1 | 17 | + | MYH10 | 17 | + |
| exon-exon | NDOR1 | 9 | - | TMEM203 | 9 | - |
| exon-exon | NDRG1 | 8 | - | ANXA4 | 2 | - |
| exon-exon | NDRG2 | 14 | + | TPPP2 | 14 | + |
| intron-exon | NDRG2 | 14 | + | RNASE7 | 14 | + |
| intron-exon | NDST1-AS1 | 5 | + | NDST1 | 5 | + |
| exon-exon | NDUFA10 | 2 | - | NDUFA10 | 2 | + |
| exon-exon | NDUFA11 | 19 | - | FUT5 | 19 | - |
| exon-exon | NDUFA11 | 19 | - | FUT5 | 19 | - |
| exon-exon | NDUFA12 | 12 | - | LOC105369915 | 12 | - |
| exon-exon | NDUFA13 | 19 | + | YJEFN3 | 19 | + |
| exon-exon | NDUFA13 | 19 | + | YJEFN3 | 19 | + |
| exon-intron | NDUFA3 | 19 | + | TFPT | 19 | + |
| exon-exon | NDUFA3 | 19 | + | TFPT | 19 | + |
| exon-intron | NDUFA4P1 | 1 | + | LOC105375147 | 7 | + |
| exon-intron | NDUFA5 | 7 | + | ASB15 | 7 | + |
| intron-exon | NDUFA6-DT | 22 | + | LOC102723722 | 22 | + |
| exon-exon | NDUFA6-DT | 22 | - | NDUFA6 | 22 | - |
| exon-exon | NDUFA7 | 19 | - | CD320 | 19 | - |
| exon-intron | NDUFA8 | 9 | + | LOC113839504 | 9 | + |
| exon-intron | NDUFA9 | 12 | + | GALNT8 | 12 | + |
| exon-exon | NDUFA9 | 12 | + | GALNT8 | 12 | + |
| exon-exon | NDUFA9 | 12 | + | GALNT8 | 12 | + |
| exon-intron | NDUFAB1 | 16 | - | ZMYM2 | 13 | - |
| intron-exon | NDUFAF3 | 3 | - | DALRD3 | 3 | - |
| intron-exon | NDUFAF3 | 3 | - | DALRD3 | 3 | - |
| intron-exon | NDUFAF3 | 3 | - | DALRD3 | 3 | - |
| exon-exon | NDUFAF3 | 3 | - | DALRD3 | 3 | - |
| exon-exon | NDUFAF3 | 3 | - | DALRD3 | 3 | - |
| exon-exon | NDUFAF3 | 3 | - | DALRD3 | 3 | - |
| exon-exon | NDUFAF3 | 3 | - | DALRD3 | 3 | - |
| intron-exon | NDUFAF3 | 3 | - | DALRD3 | 3 | - |
| intron-exon | NDUFAF3 | 3 | - | DALRD3 | 3 | - |
| exon-intron | NDUFAF5 | 20 | + | HSPB2-C11orf52 | 11 | - |
| intron-exon | NDUFAF6 | 8 | - | CCNE2 | 8 | - |
| exon-exon | NDUFB10 | 16 | + | NDUFB10 | 16 | - |
| intron-exon | NDUFB2 | 7 | - | NDUFB2-AS1 | 7 | - |
| exon-exon | NDUFB2-AS1 | 7 | - | ADCK2 | 7 | - |
| exon-intron | NDUFB5 | 3 | + | ARHGAP27 | 17 | - |
| exon-intron | NDUFB6 | 9 | - | TOPORS | 9 | - |
| exon-intron | NDUFB6 | 9 | - | TOPORS | 9 | - |
| exon-exon | NDUFB7 | 19 | + | ALDH1B1 | 9 | - |
| exon-intron | NDUFB7 | 19 | - | ADGRE5 | 19 | - |
| exon-exon | NDUFB8 | 10 | + | HIF1AN | 10 | + |
| exon-exon | NDUFB8 | 10 | - | SEC31B | 10 | - |
| exon-exon | NDUFB8 | 10 | - | SEC31B | 10 | - |
| exon-exon | NDUFB8 | 10 | - | SEC31B | 10 | - |
| exon-intron | NDUFB8 | 10 | - | SEC31B | 10 | - |
| exon-exon | NDUFB8 | 10 | - | SEC31B | 10 | - |
| exon-exon | NDUFB8 | 10 | - | SEC31B | 10 | - |
| exon-intron | NDUFB8 | 10 | - | SEC31B | 10 | - |
| exon-exon | NDUFB8 | 10 | - | SEC31B | 10 | - |
| exon-exon | NDUFB8 | 10 | - | SEC31B | 10 | - |
| exon-exon | NDUFB8 | 10 | - | SEC31B | 10 | - |
| exon-exon | NDUFB8 | 10 | - | SEC31B | 10 | - |
| exon-exon | NDUFB9 | 8 | + | LOC105375740 | 8 | + |
| exon-exon | NDUFC1 | 4 | - | MGARP | 4 | - |
| exon-exon | NDUFC2 | 11 | - | KCTD14 | 11 | - |
| exon-exon | NDUFC2 | 11 | - | KCTD14 | 11 | - |
| exon-exon | NDUFC2 | 11 | - | KCTD14 | 11 | - |
| exon-intron | NDUFC2-KCTD14 | 11 | - | ME1 | 6 | - |
| exon-exon | NDUFS2 | 1 | - | GTF2H2B | 5 | - |
| exon-exon | NDUFS2 | 1 | - | GTF2H2B | 5 | - |
| exon-intron | NDUFS5 | 1 | + | SERHL | 22 | - |
| exon-exon | NDUFS5 | 1 | + | RPL10P16 | 19 | - |
| exon-intron | NDUFS8 | 11 | + | NELL1 | 11 | - |
| exon-exon | NDUFV2 | 18 | + | ANKRD12 | 18 | + |
| intron-exon | NDUFV2-AS1 | 18 | + | ANKRD12 | 18 | + |
| intron-exon | NDUFV2-AS1 | 18 | - | NDUFV2 | 18 | - |
| intron-exon | NDUFV2-AS1 | 18 | - | NDUFV2 | 18 | - |
| intron-exon | NDUFV2-AS1 | 18 | - | NDUFV2 | 18 | - |
| intron-exon | NDUFV2-AS1 | 18 | - | NDUFV2 | 18 | - |
| intron-exon | NDUFV2-AS1 | 18 | - | NDUFV2 | 18 | - |
| intron-exon | NDUFV2-AS1 | 18 | - | NDUFV2 | 18 | - |
| intron-exon | NDUFV2-AS1 | 18 | - | NDUFV2 | 18 | - |
| intron-exon | NDUFV2-AS1 | 18 | - | NDUFV2 | 18 | - |
| intron-exon | NDUFV2-AS1 | 18 | - | NDUFV2 | 18 | - |
| intron-exon | NDUFV2-AS1 | 18 | - | NDUFV2 | 18 | - |
| intron-exon | NDUFV2-AS1 | 18 | - | NDUFV2 | 18 | - |
| intron-exon | NDUFV2-AS1 | 18 | - | NDUFV2 | 18 | - |
| intron-exon | NDUFV2-AS1 | 18 | - | NDUFV2 | 18 | - |
| intron-exon | NDUFV2-AS1 | 18 | - | NDUFV2 | 18 | - |
| intron-exon | NDUFV2-AS1 | 18 | - | NDUFV2 | 18 | - |
| intron-exon | NDUFV2-AS1 | 18 | - | NDUFV2 | 18 | - |
| intron-exon | NDUFV2-AS1 | 18 | - | NDUFV2 | 18 | - |
| intron-exon | NDUFV2-AS1 | 18 | - | NDUFV2 | 18 | - |
| intron-exon | NDUFV2-AS1 | 18 | - | NDUFV2 | 18 | - |
| intron-exon | NDUFV2-AS1 | 18 | - | NDUFV2 | 18 | - |
| intron-exon | NDUFV2-AS1 | 18 | - | NDUFV2 | 18 | - |
| intron-exon | NDUFV2-AS1 | 18 | - | NDUFV2 | 18 | - |
| exon-intron | NEAT1 | 11 | + | FLT3 | 13 | + |
| exon-intron | NEAT1 | 11 | + | SNX32 | 11 | + |
| exon-intron | NEAT1 | 11 | + | PPP2R5C | 14 | + |
| exon-exon | NEAT1 | 11 | - | PPP6R2 | 22 | - |
| exon-exon | NEAT1 | 11 | - | C3 | 19 | - |
| exon-exon | NEAT1 | 11 | - | EEF1G | 11 | - |
| exon-intron | NEAT1 | 11 | - | DDX58 | 9 | - |
| exon-intron | NEAT1 | 11 | - | CAPN1 | 11 | - |
| intron-exon | NEBL-AS1 | 10 | - | NEBL | 10 | - |
| intron-exon | NECAB3 | 20 | + | C20orf144 | 20 | + |
| exon-exon | NECAB3 | 20 | + | PXMP4 | 20 | + |
| intron-exon | NECTIN1 | 11 | + | NECTIN1-AS1 | 11 | + |
| intron-exon | NECTIN3 | 3 | - | NECTIN3-AS1 | 3 | - |
| exon-exon | NEDD8 | 14 | - | MDP1 | 14 | - |
| exon-exon | NEDD8 | 14 | - | MDP1 | 14 | - |
| intron-exon | NEDD8 | 14 | - | MDP1 | 14 | - |
| exon-exon | NEDD8-MDP1 | 14 | + | RPL6 | 12 | - |
| exon-exon | NEDD8-MDP1 | 14 | + | NEDD8-MDP1 | 14 | + |
| exon-exon | NEDD8-MDP1 | 14 | - | NEDD8-MDP1 | 14 | - |
| exon-exon | NEK11 | 3 | - | ASTE1 | 3 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| exon-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| intron-exon | NEMF | 14 | - | KLHDC2 | 14 | - |
| intron-exon | NEMF | 14 | - | S100A2 | 1 | + |
| intron-exon | NEMP2 | 2 | - | MFSD6 | 2 | - |
| exon-intron | NEURL2 | 20 | - | SPATA25 | 20 | - |
| exon-exon | NEUROD1 | 2 | - | CERKL | 2 | - |
| exon-exon | NEUROD1 | 2 | - | CERKL | 2 | - |
| intron-exon | NF2 | 22 | - | ZBTB20 | 3 | + |
| exon-intron | NFAM1 | 22 | - | SPRY4-AS1 | 5 | - |
| exon-exon | NFE2L2 | 2 | + | LOC100130691 | 2 | + |
| exon-intron | NFE2L2 | 2 | + | OPCML | 11 | - |
| exon-exon | NFIA | 1 | - | NFIA | 1 | + |
| exon-exon | NFILZ | 19 | + | LOC107983991 | 19 | + |
| exon-exon | NFILZ | 19 | + | LOC107983991 | 19 | + |
| exon-intron | NFIX | 19 | + | RBFOX1 | 16 | - |
| exon-intron | NFKB2 | 10 | - | POLR2A | 17 | - |
| exon-intron | NFKBIA | 14 | + | RFC5 | 12 | - |
| exon-intron | NFKBIZ | 3 | + | ADAP2 | 17 | + |
| exon-exon | NFS1 | 20 | - | CPNE1 | 20 | - |
| exon-exon | NFS1 | 20 | - | CPNE1 | 20 | - |
| exon-exon | NHLRC3 | 13 | - | PHIP | 6 | + |
| exon-exon | NHLRC4 | 16 | + | PIGQ | 16 | + |
| exon-exon | NHLRC4 | 16 | + | PIGQ | 16 | + |
| exon-exon | NHSL2 | X | + | FLJ44635 | X | + |
| exon-exon | NHSL2 | X | + | BTBD9 | 6 | - |
| exon-exon | NIBAN3 | 19 | + | COLGALT1 | 19 | + |
| exon-exon | NIBAN3 | 19 | + | COLGALT1 | 19 | + |
| exon-exon | NICN1 | 3 | - | AMT | 3 | - |
| exon-exon | NICN1 | 3 | - | AMT | 3 | - |
| exon-exon | NICN1 | 3 | - | AMT | 3 | - |
| exon-exon | NICN1 | 3 | - | AMT | 3 | - |
| exon-exon | NICN1 | 3 | - | AMT | 3 | - |
| exon-exon | NICN1 | 3 | - | AMT | 3 | - |
| exon-exon | NICN1 | 3 | - | AMT | 3 | - |
| exon-exon | NICN1 | 3 | - | AMT | 3 | - |
| exon-exon | NICN1 | 3 | - | AMT | 3 | - |
| exon-intron | NICN1 | 3 | - | AMT | 3 | - |
| exon-exon | NICN1 | 3 | - | AMT | 3 | - |
| exon-exon | NICN1 | 3 | - | AMT | 3 | - |
| exon-exon | NICN1 | 3 | - | AMT | 3 | - |
| exon-exon | NID2 | 14 | - | RTRAF | 14 | - |
| exon-exon | NIFK-AS1 | 2 | + | NIFK | 2 | + |
| exon-exon | NIFK-AS1 | 2 | + | NIFK | 2 | + |
| exon-exon | NIP7 | 16 | - | COG8 | 16 | - |
| exon-exon | NIPSNAP1 | 22 | + | FUT1 | 19 | + |
| intron-exon | NIPSNAP1 | 22 | + | PKD1L1 | 7 | - |
| exon-exon | NIT1 | 1 | - | PFDN2 | 1 | - |
| exon-exon | NIT1 | 1 | - | PFDN2 | 1 | - |
| exon-exon | NKAPP1 | X | - | RHOXF1-AS1 | X | - |
| exon-exon | NKIRAS1 | 3 | - | UBE2E1 | 3 | - |
| exon-exon | NKIRAS1 | 3 | - | UBE2E1 | 3 | - |
| exon-exon | NKIRAS1 | 3 | - | UBE2E1 | 3 | - |
| exon-intron | NKIRAS2 | 17 | + | ZNF385C | 17 | + |
| exon-intron | NKIRAS2 | 17 | + | ZNF385C | 17 | + |
| intron-exon | NKIRAS2 | 17 | - | DNAJC7 | 17 | - |
| exon-intron | NKIRAS2 | 17 | - | BMP6 | 6 | - |
| exon-exon | NKTR | 3 | + | SCAPER | 15 | - |
| exon-intron | NKX2-1 | 14 | - | SFTA3 | 14 | - |
| exon-intron | NKX2-1 | 14 | - | SFTA3 | 14 | - |
| exon-intron | NKX2-1 | 14 | - | SFTA3 | 14 | - |
| exon-exon | NKX6-2 | 10 | - | INPP5A | 10 | - |
| exon-exon | NKX6-2 | 10 | - | INPP5A | 10 | - |
| exon-exon | NKX6-2 | 10 | - | INPP5A | 10 | - |
| exon-exon | NKX6-2 | 10 | - | INPP5A | 10 | - |
| exon-exon | NLE1 | 17 | - | DR1 | 1 | - |
| exon-exon | NLRC3 | 16 | + | LOC101929732 | 16 | + |
| intron-exon | NLRP2 | 19 | - | NLRP7 | 19 | - |
| intron-exon | NLRP2 | 19 | - | NLRP7 | 19 | - |
| intron-exon | NLRP2 | 19 | - | NLRP7 | 19 | - |
| intron-exon | NLRP2 | 19 | - | NLRP7 | 19 | - |
| intron-exon | NLRP2 | 19 | - | NLRP7 | 19 | - |
| exon-exon | NLRP4 | 19 | - | NLRP11 | 19 | - |
| intron-exon | NLRP7 | 19 | + | NLRP2 | 19 | + |
| intron-exon | NLRP7 | 19 | + | NLRP2 | 19 | + |
| intron-exon | NLRP9 | 19 | - | EPN1 | 19 | - |
| exon-exon | NME1 | 17 | + | NME2 | 17 | + |
| exon-exon | NME2 | 17 | - | NME1 | 17 | - |
| exon-exon | NME2 | 17 | - | NME1 | 17 | - |
| exon-exon | NME2 | 17 | - | NME1 | 17 | - |
| exon-exon | NME2P1 | 12 | - | ND5 | MT | + |
| exon-exon | NME4 | 16 | + | DECR2 | 16 | + |
| exon-intron | NME4 | 16 | + | BCR | 22 | + |
| exon-intron | NME6 | 3 | - | OR7C1 | 19 | - |
| exon-intron | NME7 | 1 | + | AL035401.1 | 6 | + |
| exon-exon | NME8 | 7 | + | EPDR1 | 7 | + |
| intron-exon | NMNAT1 | 1 | + | KIF1B | 1 | + |
| intron-exon | NMNAT1 | 1 | - | LZIC | 1 | - |
| intron-exon | NMNAT1 | 1 | - | LZIC | 1 | - |
| intron-exon | NMNAT2 | 1 | - | LAMC2 | 1 | - |
| intron-exon | NMNAT2 | 1 | - | LAMC2 | 1 | - |
| intron-exon | NMNAT2 | 1 | - | LAMC2 | 1 | - |
| intron-exon | NOCT | 4 | + | ELF2 | 4 | + |
| intron-exon | NOCT | 4 | - | MMS19 | 10 | - |
| intron-exon | NOCT | 4 | - | CRLF3 | 17 | - |
| intron-exon | NOCT | 4 | - | CRLF3 | 17 | - |
| exon-exon | NOL3 | 16 | - | NOL3 | 16 | + |
| exon-exon | NOL6 | 9 | + | NOL6 | 9 | - |
| exon-exon | NOL7 | 6 | + | RANBP9 | 6 | + |
| exon-intron | NOL9 | 1 | + | CAMTA1 | 1 | + |
| exon-intron | NOLC1 | 10 | - | SVIL | 10 | - |
| exon-intron | NOLC1 | 10 | - | SHROOM3-AS1 | 4 | - |
| intron-exon | NOP14 | 4 | - | NOP14-AS1 | 4 | - |
| exon-exon | NOP14 | 4 | - | B2M | 15 | - |
| exon-exon | NOP53 | 19 | - | NOP53 | 19 | + |
| exon-exon | NORAD | 20 | + | PRNP | 20 | + |
| exon-exon | NOS1AP | 1 | + | C1orf226 | 1 | + |
| exon-exon | NOS1AP | 1 | + | C1orf226 | 1 | + |
| exon-intron | NOTCH2NLB | 1 | + | CAPZA2 | 7 | + |
| exon-intron | NOTCH4 | 6 | - | GPSM3 | 6 | - |
| exon-intron | NOTCH4 | 6 | - | GPSM3 | 6 | - |
| exon-exon | NOX1 | X | - | CSTF2 | X | - |
| exon-exon | NOX1 | X | - | CSTF2 | X | - |
| exon-exon | NOX1 | X | - | CSTF2 | X | - |
| exon-exon | NOX1 | X | - | CSTF2 | X | - |
| exon-exon | NOX1 | X | - | CSTF2 | X | - |
| exon-exon | NOX1 | X | - | CSTF2 | X | - |
| exon-exon | NOX1 | X | - | CSTF2 | X | - |
| exon-exon | NPC2 | 14 | - | SYNDIG1L | 14 | - |
| exon-intron | NPDC1 | 9 | - | C9orf139 | 9 | - |
| exon-exon | NPDC1 | 9 | - | FUT7 | 9 | - |
| intron-exon | NPEPL1 | 20 | - | STX16 | 20 | - |
| exon-exon | NPEPPSP1 | 17 | - | TBC1D3 | 17 | - |
| exon-exon | NPEPPSP1 | 17 | - | TBC1D3 | 17 | - |
| exon-exon | NPEPPSP1 | 17 | - | TBC1D3 | 17 | - |
| intron-exon | NPEPPSP1 | 17 | - | TBC1D3 | 17 | - |
| intron-exon | NPHP3-ACAD11 | 3 | + | ACKR4 | 3 | + |
| exon-exon | NPHP3-ACAD11 | 3 | - | NPHP3-ACAD11 | 3 | - |
| exon-exon | NPHP3-ACAD11 | 3 | - | NPHP3-ACAD11 | 3 | - |
| exon-exon | NPHP3-ACAD11 | 3 | - | NPHP3-ACAD11 | 3 | - |
| exon-exon | NPHP4 | 1 | + | KCNAB2 | 1 | + |
| intron-exon | NPIPA1 | 16 | - | PKD1P3 | 16 | - |
| exon-exon | NPIPA1 | 16 | - | PKD1P3 | 16 | - |
| exon-exon | NPIPA1 | 16 | - | PKD1P3 | 16 | - |
| exon-exon | NPIPA1 | 16 | - | PKD1P3 | 16 | - |
| exon-exon | NPIPA2 | 16 | + | NPIPA7 | 16 | + |
| exon-exon | NPIPA2 | 16 | + | PKD1P3-NPIPA1 | 16 | + |
| exon-exon | NPIPA5 | 16 | - | NPIPP1 | 16 | - |
| exon-exon | NPIPA7 | 16 | - | PKD1P2 | 16 | - |
| intron-exon | NPIPA9 | 16 | + | PKD1P5-LOC105376752 | 16 | + |
| exon-intron | NPIPA9 | 16 | + | LOC105371103 | 16 | + |
| exon-exon | NPIPA9 | 16 | + | PKD1P5-LOC105376752 | 16 | + |
| exon-exon | NPIPB12 | 16 | - | NPIPB11 | 16 | - |
| intron-exon | NPIPB12 | 16 | - | NPIPB11 | 16 | - |
| intron-exon | NPIPB12 | 16 | - | NPIPB11 | 16 | - |
| exon-exon | NPIPB4 | 16 | - | NPIPB3 | 16 | - |
| exon-exon | NPIPB4 | 16 | - | NPIPB3 | 16 | - |
| intron-exon | NPIPB4 | 16 | - | LOC100190986 | 16 | - |
| intron-exon | NPIPB5 | 16 | - | NPIPB4 | 16 | - |
| exon-intron | NPIPB6 | 16 | + | NPIPB7 | 16 | + |
| exon-exon | NPIPB6 | 16 | + | CLN3 | 16 | + |
| exon-exon | NPIPB8 | 16 | + | ZSWIM1 | 20 | - |
| exon-exon | NPM1 | 5 | + | ALK | 2 | - |
| exon-intron | NPM1P32 | 2 | - | NIFK-AS1 | 2 | - |
| exon-intron | NPRL3 | 16 | + | HBA-LCR | 16 | + |
| exon-intron | NPRL3 | 16 | + | HBA-LCR | 16 | + |
| exon-intron | NPRL3 | 16 | - | MPG | 16 | - |
| exon-exon | NPRL3 | 16 | - | MPG | 16 | - |
| exon-exon | NPRL3 | 16 | - | MPG | 16 | - |
| exon-exon | NPRL3 | 16 | - | MPG | 16 | - |
| exon-exon | NPRL3 | 16 | - | MPG | 16 | - |
| exon-exon | NPRL3 | 16 | - | MPG | 16 | - |
| exon-exon | NPRL3 | 16 | - | MPG | 16 | - |
| exon-exon | NPRL3 | 16 | - | MPG | 16 | - |
| exon-exon | NPRL3 | 16 | - | MPG | 16 | - |
| exon-exon | NPRL3 | 16 | - | MPG | 16 | - |
| exon-exon | NPRL3 | 16 | - | MPG | 16 | - |
| exon-exon | NPRL3 | 16 | - | MPG | 16 | - |
| exon-exon | NPRL3 | 16 | - | MPG | 16 | - |
| exon-intron | NPRL3 | 16 | - | MPG | 16 | - |
| exon-intron | NPRL3 | 16 | - | MPG | 16 | - |
| exon-intron | NPRL3 | 16 | - | MPG | 16 | - |
| exon-intron | NPRL3 | 16 | - | MPG | 16 | - |
| exon-intron | NPRL3 | 16 | - | MPG | 16 | - |
| exon-intron | NPRL3 | 16 | - | MPG | 16 | - |
| exon-intron | NPRL3 | 16 | - | MPG | 16 | - |
| exon-intron | NPRL3 | 16 | - | MPG | 16 | - |
| exon-intron | NPRL3 | 16 | - | MPG | 16 | - |
| exon-intron | NPRL3 | 16 | - | MPG | 16 | - |
| exon-intron | NPRL3 | 16 | - | MPG | 16 | - |
| exon-intron | NPRL3 | 16 | - | MPG | 16 | - |
| intron-exon | NPSR1 | 7 | - | NPSR1-AS1 | 7 | - |
| exon-intron | NPSR1-AS1 | 7 | + | NPSR1 | 7 | + |
| exon-exon | NPTN | 15 | - | REC114 | 15 | - |
| exon-exon | NPTN | 15 | - | REC114 | 15 | - |
| exon-exon | NPTXR | 22 | - | TUBA1B | 12 | - |
| exon-intron | NQO2 | 6 | - | NQO2-AS1 | 6 | - |
| intron-exon | NR1D1 | 17 | - | THRA | 17 | - |
| intron-exon | NR1D1 | 17 | - | THRA | 17 | - |
| intron-exon | NR1D1 | 17 | - | THRA | 17 | - |
| intron-exon | NR1D1 | 17 | - | THRA | 17 | - |
| exon-exon | NR1D1 | 17 | - | THRA | 17 | - |
| intron-exon | NR1D2 | 3 | - | NKIRAS1 | 3 | - |
| intron-exon | NR1D2 | 3 | - | NKIRAS1 | 3 | - |
| intron-exon | NR1D2 | 3 | - | NKIRAS1 | 3 | - |
| exon-exon | NR1H3 | 11 | - | ACP2 | 11 | - |
| intron-exon | NR1I3 | 1 | - | TOMM40L | 1 | - |
| intron-exon | NR1I3 | 1 | - | TOMM40L | 1 | - |
| intron-exon | NR1I3 | 1 | - | TOMM40L | 1 | - |
| exon-exon | NR2C2AP | 19 | - | RFXANK | 19 | - |
| exon-exon | NR2C2AP | 19 | - | RFXANK | 19 | - |
| exon-exon | NR2C2AP | 19 | - | RFXANK | 19 | - |
| exon-exon | NR2C2AP | 19 | - | RFXANK | 19 | - |
| exon-exon | NR2C2AP | 19 | - | RFXANK | 19 | - |
| exon-exon | NR2C2AP | 19 | - | RFXANK | 19 | - |
| exon-exon | NR2C2AP | 19 | - | RFXANK | 19 | - |
| exon-exon | NR2C2AP | 19 | - | RFXANK | 19 | - |
| exon-intron | NR2C2AP | 19 | - | RFXANK | 19 | - |
| exon-exon | NR2C2AP | 19 | - | RFXANK | 19 | - |
| exon-exon | NR2C2AP | 19 | - | RFXANK | 19 | - |
| intron-exon | NR2F2-AS1 | 15 | + | NR2F2 | 15 | + |
| exon-exon | NR2F2-AS1 | 15 | - | LOC105369212 | 15 | - |
| exon-exon | NR3C1 | 5 | + | NR3C1 | 5 | - |
| exon-exon | NR3C1 | 5 | - | NR3C1 | 5 | + |
| intron-exon | NRAP | 10 | - | HABP2 | 10 | - |
| exon-exon | NRCAM | 7 | - | PNPLA8 | 7 | - |
| exon-intron | NRDC | 1 | + | LOC105378721 | 1 | + |
| exon-intron | NRDC | 1 | + | LOC105378721 | 1 | + |
| exon-intron | NRDC | 1 | + | LOC105378721 | 1 | + |
| exon-intron | NRDC | 1 | + | LOC105378721 | 1 | + |
| exon-exon | NRDE2 | 14 | - | PSMC1 | 14 | - |
| exon-exon | NRDE2 | 14 | - | PSMC1 | 14 | - |
| exon-exon | NRDE2 | 14 | - | PSMC1 | 14 | - |
| exon-exon | NRDE2 | 14 | - | PSMC1 | 14 | - |
| exon-exon | NRDE2 | 14 | - | PSMC1 | 14 | - |
| exon-exon | NRDE2 | 14 | - | PSMC1 | 14 | - |
| exon-exon | NRDE2 | 14 | - | PSMC1 | 14 | - |
| exon-exon | NRDE2 | 14 | - | PSMC1 | 14 | - |
| exon-exon | NRDE2 | 14 | - | PSMC1 | 14 | - |
| intron-exon | NREP-AS1 | 5 | - | NREP | 5 | - |
| intron-exon | NREP-AS1 | 5 | - | NREP | 5 | - |
| exon-exon | NRG4 | 15 | - | FBXO22 | 15 | - |
| exon-exon | NRG4 | 15 | - | FBXO22 | 15 | - |
| exon-exon | NRK | X | + | LOC105373304 | X | + |
| intron-exon | NRL | 14 | + | PCK2 | 14 | + |
| intron-exon | NRL | 14 | + | PCK2 | 14 | + |
| exon-exon | NRL | 14 | + | PCK2 | 14 | + |
| exon-exon | NRL | 14 | + | PCK2 | 14 | + |
| intron-exon | NRL | 14 | + | PCK2 | 14 | + |
| intron-exon | NRL | 14 | + | PCK2 | 14 | + |
| exon-exon | NRL | 14 | + | DCAF11 | 14 | + |
| exon-intron | NRXN1 | 2 | + | LOC101927089 | 2 | + |
| exon-exon | NSA2 | 5 | - | GFM2 | 5 | - |
| exon-intron | NSD2 | 4 | + | INPP5J | 22 | + |
| exon-intron | NSD3 | 8 | + | LOC107133509 | 8 | + |
| exon-intron | NSD3 | 8 | + | LOC107133509 | 8 | + |
| exon-intron | NSD3 | 8 | + | LOC107133509 | 8 | + |
| exon-exon | NSD3 | 8 | - | DDHD2 | 8 | - |
| exon-exon | NSD3 | 8 | - | DDHD2 | 8 | - |
| exon-exon | NSG1 | 4 | + | LOC112268462 | 4 | + |
| exon-exon | NSG1 | 4 | + | STX18 | 4 | + |
| exon-exon | NSG1 | 4 | + | STX18 | 4 | + |
| intron-exon | NSMCE1-DT | 16 | - | NSMCE1 | 16 | - |
| exon-intron | NSUN4 | 1 | + | FAAH | 1 | + |
| intron-exon | NSUN6 | 10 | - | NUP98 | 11 | + |
| exon-exon | NT5C | 17 | + | LOC107985034 | 17 | + |
| exon-exon | NT5C | 17 | + | LOC107985034 | 17 | + |
| exon-exon | NT5C1B | 2 | - | RDH14 | 2 | - |
| exon-exon | NT5C1B-RDH14 | 2 | + | NT5C1B-RDH14 | 2 | + |
| exon-intron | NT5C1B-RDH14 | 2 | + | LOC105373456 | 2 | + |
| intron-exon | NT5C2 | 10 | - | ANAPC5 | 12 | + |
| intron-exon | NT5C2 | 10 | - | SAV1 | 14 | + |
| intron-exon | NT5C2 | 10 | - | CCDC152 | 5 | + |
| intron-exon | NT5C2 | 10 | - | SAV1 | 14 | + |
| exon-intron | NT5C3B | 17 | + | KLHL10 | 17 | + |
| intron-exon | NTF4 | 19 | - | CGB7 | 19 | - |
| intron-exon | NTRK1 | 1 | - | SH2D2A | 1 | - |
| exon-exon | NTRK3 | 15 | + | ETV6 | 12 | - |
| exon-exon | NTS | 12 | - | ATP6V0E1 | 5 | - |
| exon-intron | NUB1 | 7 | + | CFAP20DC | 3 | - |
| exon-exon | NUBP2 | 16 | + | RPLP2 | 11 | - |
| exon-exon | NUCB1 | 19 | + | SCN8A | 12 | - |
| intron-exon | NUCB1-AS1 | 19 | - | NUCB1 | 19 | - |
| intron-exon | NUCB1-AS1 | 19 | - | NUCB1 | 19 | - |
| intron-exon | NUCB1-AS1 | 19 | - | NUCB1 | 19 | - |
| intron-exon | NUCB1-AS1 | 19 | - | NUCB1 | 19 | - |
| intron-exon | NUCB1-AS1 | 19 | - | NUCB1 | 19 | - |
| intron-exon | NUCB1-AS1 | 19 | - | NUCB1 | 19 | - |
| intron-exon | NUCB1-AS1 | 19 | - | NUCB1 | 19 | - |
| intron-exon | NUCB1-AS1 | 19 | - | NUCB1 | 19 | - |
| exon-exon | NUCB1-AS1 | 19 | - | NUCB1 | 19 | - |
| exon-exon | NUCKS1 | 1 | + | WNK1 | 12 | - |
| exon-exon | NUCKS1 | 1 | + | WNK1 | 12 | - |
| exon-exon | NUCKS1 | 1 | + | WNK1 | 12 | - |
| intron-exon | NUCKS1 | 1 | + | SCNM1 | 1 | - |
| exon-intron | NUCKS1 | 1 | - | PALM2AKAP2 | 9 | - |
| exon-exon | NUCKS1 | 1 | - | CCDC97 | 19 | + |
| exon-exon | NUCKS1 | 1 | - | CCDC97 | 19 | + |
| exon-intron | NUDCD1 | 8 | - | LOC105377623 | 4 | + |
| exon-intron | NUDT13 | 10 | + | ECD | 10 | + |
| intron-exon | NUDT13 | 10 | + | ECD | 10 | + |
| exon-intron | NUDT15 | 13 | - | SUCLA2 | 13 | - |
| exon-intron | NUDT15 | 13 | - | SUCLA2 | 13 | - |
| exon-exon | NUDT15 | 13 | - | SUCLA2 | 13 | - |
| intron-exon | NUDT15 | 13 | - | SUCLA2 | 13 | - |
| intron-exon | NUDT15 | 13 | - | SUCLA2 | 13 | - |
| intron-exon | NUDT15 | 13 | - | SUCLA2 | 13 | - |
| intron-exon | NUDT15 | 13 | - | SUCLA2 | 13 | - |
| intron-exon | NUDT15 | 13 | - | SUCLA2 | 13 | - |
| intron-exon | NUDT15 | 13 | - | SUCLA2 | 13 | - |
| exon-intron | NUDT16 | 3 | - | CFAP36 | 2 | - |
| exon-intron | NUDT19 | 19 | - | AC008736.1 | 19 | - |
| exon-exon | NUDT3 | 6 | + | MAP1A | 15 | + |
| exon-exon | NUDT3 | 6 | + | RPS10 | 6 | + |
| exon-intron | NUDT4 | 12 | - | TGFBR1 | 9 | + |
| intron-exon | NUFIP2 | 17 | + | LOC100287497 | 1 | + |
| exon-exon | NUMA1 | 11 | + | NUMA1 | 11 | - |
| exon-exon | NUMA1 | 11 | - | LSM10 | 1 | - |
| exon-exon | NUMBL | 19 | + | CBX6 | 22 | - |
| exon-intron | NUP153 | 6 | + | KIF13A | 6 | + |
| intron-exon | NUP50 | 22 | + | ELF2 | 4 | - |
| exon-intron | NUP98 | 11 | - | GPBP1 | 5 | + |
| exon-exon | NUP98 | 11 | - | CHRNA10 | 11 | - |
| exon-exon | NUP98 | 11 | - | CHRNA10 | 11 | - |
| exon-exon | NUP98 | 11 | - | CHRNA10 | 11 | - |
| exon-exon | NUSAP1 | 15 | - | SLC25A17 | 22 | - |
| intron-exon | NUTF2 | 16 | - | CENPT | 16 | - |
| intron-exon | NUTF2 | 16 | - | CENPT | 16 | - |
| intron-exon | NUTF2 | 16 | - | CENPT | 16 | - |
| intron-exon | NUTF2 | 16 | - | CENPT | 16 | - |
| intron-exon | NUTF2 | 16 | - | CENPT | 16 | - |
| intron-exon | NUTF2 | 16 | - | CENPT | 16 | - |
| exon-exon | NUTM2B-AS1 | 10 | + | LOC642361 | 10 | + |
| exon-intron | NUTM2G | 9 | + | LOC105376154 | 9 | - |
| exon-exon | NWD1 | 19 | - | MPRIP | 17 | + |
| exon-intron | NXF1 | 11 | + | LOC400541 | 16 | - |
| exon-exon | NXF1 | 11 | + | EEF2 | 19 | - |
| exon-intron | NXF2B | X | + | TCP11X2 | X | + |
| intron-exon | NXT1-AS1 | 20 | + | LOC105372571 | 20 | + |
| exon-intron | OAF | 11 | - | AUTS2 | 7 | - |
| intron-exon | OARD1 | 6 | + | NFYA | 6 | + |
| exon-exon | OARD1 | 6 | - | UNC5CL | 6 | - |
| exon-exon | OARD1 | 6 | - | UNC5CL | 6 | - |
| exon-exon | OAZ1 | 19 | + | SPPL2B | 19 | + |
| exon-exon | OAZ1 | 19 | + | ULK2 | 17 | - |
| exon-exon | OAZ2 | 15 | + | OAZ2 | 15 | - |
| intron-exon | OAZ2 | 15 | + | TAPBP | 6 | - |
| intron-exon | OBSL1 | 2 | - | TMEM198 | 2 | - |
| exon-intron | OCIAD1 | 4 | + | PDZD7 | 10 | - |
| intron-exon | OCIAD1-AS1 | 4 | - | OCIAD1 | 4 | - |
| intron-exon | OCIAD1-AS1 | 4 | - | OCIAD1 | 4 | - |
| intron-exon | OCLN | 5 | - | LOC101928924 | 5 | - |
| exon-intron | ODC1 | 2 | - | LINC02603 | 9 | - |
| exon-exon | ODF3B | 22 | - | TYMP | 22 | - |
| intron-exon | ODF3L2 | 19 | + | MADCAM1 | 19 | + |
| intron-exon | OFCC1 | 6 | - | LOC112267856 | 6 | - |
| exon-intron | OFCC1 | 6 | - | LOC112267856 | 6 | - |
| exon-intron | OFCC1 | 6 | - | LOC112267856 | 6 | - |
| exon-exon | OFCC1 | 6 | - | LOC112267856 | 6 | - |
| exon-intron | OFCC1 | 6 | - | LOC112267856 | 6 | - |
| exon-intron | OFCC1 | 6 | - | LOC112267856 | 6 | - |
| exon-intron | OFD1 | X | - | TINAGL1 | 1 | - |
| intron-exon | OGFR-AS1 | 20 | + | OGFR | 20 | + |
| exon-intron | OGFRL1 | 6 | + | LOC107986223 | 4 | - |
| exon-exon | OGT | X | + | BAG1 | 9 | - |
| exon-intron | OGT | X | - | SOX6 | 11 | + |
| exon-intron | OIP5-AS1 | 15 | - | MAML2 | 11 | - |
| exon-exon | OIP5-AS1 | 15 | - | OIP5-AS1 | 15 | + |
| exon-exon | OIP5-AS1 | 15 | - | OIP5-AS1 | 15 | + |
| exon-intron | OLFM1 | 9 | - | SRGAP3 | 3 | - |
| intron-exon | OLFM2 | 19 | - | ZNF561 | 19 | - |
| intron-exon | OLFM3 | 1 | + | DNAJA1P5 | 1 | + |
| exon-exon | OLFM4 | 13 | - | OLFM4 | 13 | + |
| exon-exon | OMA1 | 1 | - | DAB1 | 1 | - |
| exon-exon | OPN4 | 10 | + | LDB3 | 10 | + |
| intron-exon | OPTN | 10 | + | LIPT1 | 2 | + |
| exon-intron | OR11H7 | 14 | + | LOC105379109 | 5 | - |
| intron-exon | OR1R1P | 17 | - | OR3A2 | 17 | - |
| intron-exon | OR1R1P | 17 | - | OR3A2 | 17 | - |
| intron-exon | OR2A1-AS1 | 7 | - | ARHGEF35-AS1 | 7 | - |
| exon-exon | OR2C3 | 1 | - | GCSAML-AS1 | 1 | - |
| exon-intron | OR51B5 | 11 | - | HBG2 | 11 | - |
| exon-intron | OR6J1 | 14 | - | DAD1 | 14 | - |
| intron-exon | OR7C1 | 19 | - | LOC100129118 | 19 | - |
| exon-intron | ORAI2 | 7 | - | AC073517.1 | 7 | - |
| exon-exon | ORAI2 | 7 | - | LOC100630923 | 7 | - |
| exon-exon | ORAI2 | 7 | - | LOC100630923 | 7 | - |
| exon-intron | ORAI2 | 7 | - | CUX1 | 7 | - |
| exon-exon | ORC2 | 2 | + | ORC2 | 2 | - |
| exon-intron | ORC3 | 6 | - | CTDP1 | 18 | - |
| exon-exon | ORC4 | 2 | - | ACVR2A | 2 | - |
| exon-intron | ORC6 | 16 | - | PRKN | 6 | + |
| exon-intron | ORC6 | 16 | - | ANKRD26P1 | 16 | - |
| exon-intron | ORC6 | 16 | - | PLCB4 | 20 | + |
| exon-exon | ORM1 | 9 | + | ORM2 | 9 | + |
| exon-exon | ORM1 | 9 | - | TIMP2 | 17 | - |
| exon-exon | ORMDL2 | 12 | + | DNAJC14 | 12 | + |
| exon-intron | ORMDL3 | 17 | - | GSDMB | 17 | - |
| exon-exon | ORMDL3 | 17 | - | GSDMB | 17 | - |
| exon-intron | OS9 | 12 | + | FNDC3A | 13 | - |
| exon-exon | OS9 | 12 | - | OS9 | 12 | + |
| intron-exon | OSBPL9 | 1 | + | NRDC | 1 | + |
| exon-intron | OSGEP | 14 | + | LOC107372315 | 14 | + |
| exon-intron | OSGEP | 14 | + | LOC107372315 | 14 | + |
| exon-intron | OSGEP | 14 | + | LOC107372315 | 14 | + |
| exon-intron | OSGEP | 14 | + | LOC107372315 | 14 | + |
| exon-intron | OSGEP | 14 | + | LOC107372315 | 14 | + |
| exon-intron | OSGEP | 14 | + | LOC107372315 | 14 | + |
| exon-intron | OST4 | 2 | - | SGMS1 | 10 | - |
| intron-exon | OSTC | 4 | - | LOC105373796 | 2 | - |
| intron-exon | OTOP2 | 17 | - | USH1G | 17 | - |
| intron-exon | OTOP2 | 17 | - | USH1G | 17 | - |
| intron-exon | OTOP2 | 17 | - | USH1G | 17 | - |
| exon-exon | OTOP2 | 17 | - | USH1G | 17 | - |
| intron-exon | OTOP2 | 17 | - | USH1G | 17 | - |
| intron-exon | OTOP2 | 17 | - | USH1G | 17 | - |
| intron-exon | OTOP2 | 17 | - | USH1G | 17 | - |
| intron-exon | OTOP2 | 17 | - | USH1G | 17 | - |
| exon-exon | OTOP2 | 17 | - | USH1G | 17 | - |
| exon-exon | OTUB1 | 11 | + | LOC101927673 | 11 | + |
| exon-exon | OTUB1 | 11 | - | COX8A | 11 | - |
| exon-exon | OTUB1 | 11 | - | COX8A | 11 | - |
| exon-exon | OTUB1 | 11 | - | COX8A | 11 | - |
| exon-intron | OTUD5 | X | - | SHANK2 | 11 | + |
| exon-intron | OVCH1 | 12 | - | OVCH1-AS1 | 12 | - |
| intron-exon | OVCH1 | 12 | - | NORAD | 20 | + |
| exon-exon | OVCH2 | 11 | + | LOC105376533 | 11 | + |
| intron-exon | OVOL3 | 19 | + | POLR2I | 19 | + |
| exon-exon | OXNAD1 | 3 | - | DPH3 | 3 | - |
| exon-intron | OXR1 | 8 | + | LOC645405 | 15 | + |
| exon-exon | P2RX5-TAX1BP3 | 17 | + | EMC6 | 17 | + |
| exon-exon | P2RX5-TAX1BP3 | 17 | - | P2RX5-TAX1BP3 | 17 | - |
| exon-exon | P2RX5-TAX1BP3 | 17 | - | P2RX5-TAX1BP3 | 17 | - |
| exon-exon | P2RX5-TAX1BP3 | 17 | - | P2RX5-TAX1BP3 | 17 | - |
| exon-exon | P2RX5-TAX1BP3 | 17 | - | P2RX5-TAX1BP3 | 17 | - |
| exon-exon | P2RX5-TAX1BP3 | 17 | - | P2RX5-TAX1BP3 | 17 | - |
| intron-exon | P3H4 | 17 | + | FKBP10 | 17 | + |
| exon-exon | P3R3URF-PIK3R3 | 1 | - | PIK3R3 | 1 | - |
| exon-exon | P3R3URF-PIK3R3 | 1 | - | PIK3R3 | 1 | - |
| exon-exon | P3R3URF-PIK3R3 | 1 | - | PIK3R3 | 1 | - |
| exon-exon | P3R3URF-PIK3R3 | 1 | - | PIK3R3 | 1 | - |
| exon-intron | P4HA1 | 10 | + | ECD | 10 | + |
| exon-exon | P4HA1 | 10 | + | ECD | 10 | + |
| intron-exon | P4HA2-AS1 | 5 | + | P4HA2 | 5 | + |
| intron-exon | P4HA3-AS1 | 11 | - | P4HA3 | 11 | - |
| exon-exon | P4HB | 17 | + | P4HB | 17 | - |
| exon-intron | P4HB | 17 | - | UBE2L3 | 22 | - |
| intron-exon | P4HTM | 3 | - | ARIH2 | 3 | - |
| exon-exon | PAAF1 | 11 | - | COA4 | 11 | - |
| exon-exon | PAAF1 | 11 | - | COA4 | 11 | - |
| exon-intron | PABPC1 | 8 | - | LOC105376294 | 9 | - |
| exon-intron | PABPC1 | 8 | - | LOC105376294 | 9 | - |
| exon-intron | PABPC1L | 20 | + | TOMM34 | 20 | + |
| exon-exon | PABPC4 | 1 | + | PABPC4-AS1 | 1 | + |
| exon-exon | PABPC4 | 1 | + | PABPC4-AS1 | 1 | + |
| exon-intron | PACRG-AS3 | 6 | - | PACRG | 6 | - |
| exon-exon | PACSIN2 | 22 | - | ARFGAP3 | 22 | - |
| exon-exon | PACSIN2 | 22 | - | ARFGAP3 | 22 | - |
| exon-intron | PAEP | 9 | + | LOC107985960 | 2 | + |
| exon-intron | PAFAH1B2 | 11 | + | DSCAML1 | 11 | + |
| exon-intron | PAFAH1B2 | 11 | + | TCF20 | 22 | - |
| exon-exon | PAFAH1B3 | 19 | + | ICE1 | 5 | - |
| exon-exon | PAFAH1B3 | 19 | + | PRR19 | 19 | + |
| exon-exon | PAFAH1B3 | 19 | + | PRR19 | 19 | + |
| exon-intron | PAGR1 | 16 | + | MVP | 16 | + |
| exon-exon | PAGR1 | 16 | + | MVP | 16 | + |
| exon-exon | PAGR1 | 16 | + | MVP | 16 | + |
| exon-exon | PAGR1 | 16 | + | MVP | 16 | + |
| exon-exon | PAGR1 | 16 | - | LOC112268170 | 16 | - |
| exon-intron | PAICS | 4 | + | NOA1 | 4 | + |
| exon-exon | PAIP1 | 5 | + | LOC645139 | 17 | - |
| exon-exon | PAIP1 | 5 | - | LOC645139 | 17 | + |
| exon-exon | PAIP1 | 5 | - | LOC645139 | 17 | + |
| exon-exon | PAIP1 | 5 | - | LOC645139 | 17 | + |
| exon-exon | PAIP1 | 5 | - | LOC645139 | 17 | + |
| exon-intron | PAK3 | X | + | BRAP | 12 | + |
| exon-intron | PAK6 | 15 | - | LOC107984763 | 15 | - |
| exon-intron | PAK6 | 15 | - | LOC107984763 | 15 | - |
| exon-intron | PAK6 | 15 | - | LOC107984763 | 15 | - |
| exon-intron | PAK6 | 15 | - | LOC107984763 | 15 | - |
| exon-intron | PAK6 | 15 | - | LOC107984763 | 15 | - |
| exon-exon | PAM16 | 16 | + | CORO7 | 16 | + |
| exon-exon | PANO1 | 11 | - | SLC25A22 | 11 | - |
| exon-intron | PANO1 | 11 | - | SLC25A22 | 11 | - |
| exon-exon | PANO1 | 11 | - | SLC25A22 | 11 | - |
| exon-intron | PANO1 | 11 | - | SLC25A22 | 11 | - |
| exon-intron | PANX1 | 11 | - | HEPHL1 | 11 | - |
| exon-exon | PAOX | 10 | + | KIF22 | 16 | - |
| intron-exon | PAPPA | 9 | - | LRP2 | 2 | - |
| intron-exon | PAPPA | 9 | - | CSH1 | 17 | + |
| exon-exon | PAPPA | 9 | - | EDARADD | 1 | - |
| exon-exon | PAPPA | 9 | - | LOC101927702 | 14 | + |
| exon-exon | PAPPA-AS1 | 9 | - | PAPPA | 9 | - |
| exon-exon | PAPPA-AS1 | 9 | - | PAPPA | 9 | - |
| exon-exon | PAPPA-AS1 | 9 | - | PAPPA | 9 | - |
| exon-exon | PAPPA-AS1 | 9 | - | PAPPA | 9 | - |
| exon-intron | PAPPA-AS1 | 9 | - | EPAS1 | 2 | - |
| intron-exon | PAQR3 | 4 | - | BMP2K | 4 | - |
| intron-exon | PAQR3 | 4 | - | BMP2K | 4 | - |
| exon-exon | PAQR4 | 16 | + | PKMYT1 | 16 | + |
| intron-exon | PAQR4 | 16 | - | KREMEN2 | 16 | - |
| intron-exon | PAQR4 | 16 | - | KREMEN2 | 16 | - |
| intron-exon | PAQR4 | 16 | - | PKMYT1 | 16 | - |
| exon-exon | PAQR8 | 6 | + | EFHC1 | 6 | + |
| exon-intron | PARD6G | 18 | - | PARD6G-AS1 | 18 | - |
| exon-exon | PARGP1 | 10 | - | PARGP1-AGAP4 | 10 | - |
| exon-exon | PARGP1 | 10 | - | PARGP1-AGAP4 | 10 | - |
| exon-intron | PARGP1 | 10 | - | PARGP1-AGAP4 | 10 | - |
| exon-intron | PARGP1 | 10 | - | PARGP1-AGAP4 | 10 | - |
| exon-exon | PARGP1 | 10 | - | PARGP1-AGAP4 | 10 | - |
| exon-intron | PARGP1 | 10 | - | PARGP1-AGAP4 | 10 | - |
| exon-exon | PARGP1-AGAP4 | 10 | + | BMS1P2-AGAP9 | 10 | + |
| exon-exon | PARP4 | 13 | + | TALAM1 | 11 | - |
| exon-intron | PARPBP | 12 | - | NUP37 | 12 | - |
| exon-exon | PARVA | 11 | + | PARVA | 11 | - |
| exon-exon | PARVG | 22 | + | LOC107985571 | 22 | + |
| exon-exon | PATZ1 | 22 | + | WDR25 | 14 | - |
| exon-exon | PAX3 | 2 | - | FOXO1 | 13 | - |
| exon-exon | PAX3 | 2 | - | FOXO1 | 13 | - |
| exon-exon | PAX3 | 2 | - | FOXO1 | 13 | - |
| exon-exon | PAX8 | 2 | + | PAX8-AS1 | 2 | + |
| exon-exon | PAX8 | 2 | + | PAX8-AS1 | 2 | + |
| intron-exon | PAX8 | 2 | + | PAX8-AS1 | 2 | + |
| exon-exon | PAXIP1 | 7 | - | RPL4 | 15 | - |
| exon-exon | PAXIP1 | 7 | - | RPL4 | 15 | - |
| exon-intron | PAXIP1-AS1 | 7 | - | PAXIP1 | 7 | - |
| exon-intron | PBK | 8 | - | ESCO2 | 8 | + |
| exon-exon | PBX1 | 1 | - | PBX1 | 1 | + |
| exon-exon | PBX2 | 6 | - | AGER | 6 | - |
| exon-exon | PBX2 | 6 | - | AGER | 6 | - |
| exon-exon | PBX2 | 6 | - | AGER | 6 | - |
| exon-exon | PBX2 | 6 | - | AGER | 6 | - |
| exon-exon | PBX2P1 | 3 | + | AGER | 6 | - |
| exon-exon | PBX2P1 | 3 | + | AGER | 6 | - |
| intron-exon | PC | 11 | - | SLC9A8 | 20 | - |
| exon-exon | PCARE | 2 | - | TOGARAM2 | 2 | - |
| exon-exon | PCAT7 | 9 | + | FBP2 | 9 | + |
| exon-exon | PCBD1 | 10 | - | SGPL1 | 10 | - |
| intron-exon | PCBD2 | 5 | + | PLP2 | X | - |
| exon-intron | PCBP1 | 2 | - | PCBP1-AS1 | 2 | - |
| exon-exon | PCBP2 | 12 | + | CDK11B | 1 | - |
| exon-exon | PCBP2 | 12 | - | PRR13 | 12 | - |
| exon-exon | PCBP2 | 12 | - | PRR13 | 12 | - |
| exon-intron | PCBP2 | 12 | - | LOC107987267 | 19 | + |
| exon-exon | PCBP2 | 12 | - | PRR13 | 12 | - |
| exon-exon | PCBP2 | 12 | - | PRR13 | 12 | - |
| exon-intron | PCBP2 | 12 | - | LOC107987267 | 19 | + |
| exon-exon | PCBP2 | 12 | - | PRR13 | 12 | - |
| exon-exon | PCBP2 | 12 | - | PRR13 | 12 | - |
| exon-exon | PCBP2 | 12 | - | PRR13 | 12 | - |
| exon-exon | PCBP2 | 12 | - | PRR13 | 12 | - |
| exon-exon | PCBP2 | 12 | - | PRR13 | 12 | - |
| exon-intron | PCDH1 | 5 | - | ZNF717 | 3 | - |
| exon-exon | PCDH12 | 5 | + | RNF14 | 5 | + |
| exon-intron | PCDH12 | 5 | - | DELE1 | 5 | - |
| exon-intron | PCDHA10 | 5 | - | PCDHA4 | 5 | - |
| exon-intron | PCDHA10 | 5 | - | PCDHA4 | 5 | - |
| exon-exon | PCDHA10 | 5 | - | PCDHA4 | 5 | - |
| exon-exon | PCDHB14 | 5 | + | PCDHB15 | 5 | + |
| exon-intron | PCDHB16 | 5 | + | PCDHB9 | 5 | + |
| exon-intron | PCDHB16 | 5 | + | PCDHB@ | 5 | + |
| exon-intron | PCDHB17P | 5 | + | PCDHB@ | 5 | + |
| exon-intron | PCDHB7 | 5 | - | PCDHB@ | 5 | - |
| intron-exon | PCDHB@ | 5 | + | PCDHB6 | 5 | + |
| intron-exon | PCDHB@ | 5 | + | PCDHB9 | 5 | + |
| exon-exon | PCDHGA2 | 5 | + | PCDHGA8 | 5 | + |
| exon-intron | PCDHGA8 | 5 | - | PCDHGA2 | 5 | - |
| exon-intron | PCED1B-AS1 | 12 | - | PCED1B | 12 | - |
| exon-intron | PCED1B-AS1 | 12 | - | PCED1B | 12 | - |
| exon-intron | PCED1B-AS1 | 12 | - | PCED1B | 12 | - |
| exon-intron | PCED1B-AS1 | 12 | - | PCED1B | 12 | - |
| exon-exon | PCGF2 | 17 | - | CISD3 | 17 | - |
| exon-exon | PCGF3 | 4 | + | PCGF3 | 4 | - |
| intron-exon | PCLAF | 15 | - | CSNK1G1 | 15 | - |
| intron-exon | PCLAF | 15 | - | CSNK1G1 | 15 | - |
| intron-exon | PCLAF | 15 | - | CSNK1G1 | 15 | - |
| intron-exon | PCLAF | 15 | - | CSNK1G1 | 15 | - |
| intron-exon | PCLAF | 15 | - | CSNK1G1 | 15 | - |
| intron-exon | PCLAF | 15 | - | CSNK1G1 | 15 | - |
| intron-exon | PCLAF | 15 | - | CSNK1G1 | 15 | - |
| intron-exon | PCLAF | 15 | - | CSNK1G1 | 15 | - |
| intron-exon | PCLAF | 15 | - | CSNK1G1 | 15 | - |
| exon-intron | PCLAF | 15 | - | CSNK1G1 | 15 | - |
| exon-intron | PCLAF | 15 | - | CSNK1G1 | 15 | - |
| exon-intron | PCLAF | 15 | - | CSNK1G1 | 15 | - |
| exon-exon | PCLAF | 15 | - | CSNK1G1 | 15 | - |
| exon-exon | PCLAF | 15 | - | CSNK1G1 | 15 | - |
| exon-exon | PCLAF | 15 | - | CSNK1G1 | 15 | - |
| exon-exon | PCM1 | 8 | + | FGL1 | 8 | - |
| exon-intron | PCMTD1 | 8 | - | DCDC2 | 6 | - |
| exon-exon | PCMTD1 | 8 | - | DCDC2 | 6 | - |
| exon-exon | PCNA | 20 | + | PCNA-AS1 | 20 | + |
| exon-exon | PCNX2 | 1 | - | NTPCR | 1 | - |
| exon-exon | PCNX3 | 11 | - | MAP3K11 | 11 | - |
| exon-exon | PCOLCE-AS1 | 7 | + | PCOLCE | 7 | + |
| exon-intron | PCOTH | 13 | + | C1QTNF9 | 13 | - |
| exon-exon | PCOTH | 13 | + | C1QTNF9 | 13 | - |
| intron-exon | PCP2 | 19 | + | STXBP2 | 19 | + |
| intron-exon | PCP2 | 19 | + | STXBP2 | 19 | + |
| intron-exon | PCSK7 | 11 | - | LOC100652768 | 11 | - |
| exon-exon | PCSK7 | 11 | - | NIN | 14 | + |
| exon-exon | PCSK7 | 11 | - | LRRC61 | 7 | - |
| exon-exon | PCYT1A | 3 | + | TCTEX1D2 | 3 | + |
| exon-exon | PCYT1A | 3 | + | TCTEX1D2 | 3 | + |
| exon-exon | PCYT2 | 17 | + | NPB | 17 | + |
| exon-intron | PDAP1 | 7 | - | ARPC1B | 7 | - |
| exon-exon | PDAP1 | 7 | - | ARPC1B | 7 | - |
| exon-exon | PDAP1 | 7 | - | ARPC1B | 7 | - |
| exon-exon | PDAP1 | 7 | - | ARPC1B | 7 | - |
| exon-exon | PDAP1 | 7 | - | ARPC1B | 7 | - |
| exon-exon | PDAP1 | 7 | - | ARPC1B | 7 | - |
| exon-exon | PDAP1 | 7 | - | ARPC1B | 7 | - |
| exon-intron | PDAP1 | 7 | - | ARPC1B | 7 | - |
| exon-intron | PDAP1 | 7 | - | TMEM117 | 12 | + |
| exon-intron | PDAP1 | 7 | - | HSPB8 | 12 | + |
| exon-exon | PDCD2L | 19 | - | GPI | 19 | - |
| exon-exon | PDCD2L | 19 | - | GPI | 19 | - |
| exon-exon | PDCD6IP | 3 | - | LOC105377023 | 3 | - |
| exon-intron | PDCL | 9 | - | C3orf70 | 3 | - |
| exon-intron | PDCL | 9 | - | C3orf70 | 3 | - |
| intron-exon | PDE12 | 3 | + | MYCBPAP | 17 | - |
| intron-exon | PDE12 | 3 | + | ARF4 | 3 | - |
| exon-intron | PDE3A | 12 | + | SLCO1C1 | 12 | + |
| exon-intron | PDE3A | 12 | + | SLCO1C1 | 12 | + |
| intron-exon | PDE3A | 12 | - | CENPF | 1 | + |
| exon-intron | PDE4A | 19 | - | GPR108 | 19 | + |
| exon-exon | PDE4B | 1 | + | PDE4B | 1 | - |
| intron-exon | PDE4DIP | 1 | - | TMEM91 | 19 | - |
| intron-exon | PDE7A | 8 | - | MTFR1 | 8 | - |
| intron-exon | PDE7A | 8 | - | MTFR1 | 8 | - |
| intron-exon | PDE7A | 8 | - | MTFR1 | 8 | - |
| intron-exon | PDE7A | 8 | - | MTFR1 | 8 | - |
| intron-exon | PDE7A | 8 | - | MTFR1 | 8 | - |
| exon-exon | PDE8B | 5 | + | WDR41 | 5 | + |
| intron-exon | PDE8B | 5 | - | ZBED3-AS1 | 5 | - |
| exon-exon | PDGFA | 7 | - | ATF4 | 22 | - |
| exon-exon | PDGFC | 4 | + | PPA2 | 4 | + |
| exon-exon | PDHA1 | X | + | MAP3K15 | X | + |
| exon-intron | PDIA3 | 15 | + | HMOX1 | 22 | - |
| exon-exon | PDIA5 | 3 | + | SEC22A | 3 | + |
| exon-exon | PDIA5 | 3 | + | SEC22A | 3 | + |
| intron-exon | PDIA5 | 3 | + | SEC22A | 3 | + |
| exon-intron | PDIK1L | 1 | + | ACBD7-DCLRE1CP1 | 10 | + |
| exon-exon | PDLIM2 | 8 | + | C8orf58 | 8 | + |
| exon-exon | PDLIM2 | 8 | + | C8orf58 | 8 | + |
| intron-exon | PDPK2P | 16 | - | LOC652276 | 16 | - |
| exon-exon | PDRG1 | 20 | - | TTLL9 | 20 | - |
| intron-exon | PDSS2 | 6 | - | CD24 | 6 | - |
| intron-exon | PDXDC1 | 16 | + | LRP10 | 14 | - |
| exon-exon | PDXDC1 | 16 | + | LOC105371099 | 16 | - |
| exon-intron | PDXDC2P-NPIPB14P | 16 | - | LTBP1 | 2 | + |
| intron-exon | PDZD9 | 16 | - | UQCRC2 | 16 | - |
| intron-exon | PDZD9 | 16 | - | UQCRC2 | 16 | - |
| intron-exon | PDZD9 | 16 | - | UQCRC2 | 16 | - |
| intron-exon | PDZD9 | 16 | - | UQCRC2 | 16 | - |
| intron-exon | PDZD9 | 16 | - | UQCRC2 | 16 | - |
| intron-exon | PDZD9 | 16 | - | UQCRC2 | 16 | - |
| exon-intron | PEAK1 | 15 | + | GLCCI1 | 7 | + |
| exon-exon | PEAK1 | 15 | + | HMG20A | 15 | + |
| exon-exon | PEAK1 | 15 | + | HMG20A | 15 | + |
| intron-exon | PEF1-AS1 | 1 | - | PEF1 | 1 | - |
| intron-exon | PEF1-AS1 | 1 | - | PEF1 | 1 | - |
| intron-exon | PEF1-AS1 | 1 | - | PEF1 | 1 | - |
| intron-exon | PEF1-AS1 | 1 | - | PEF1 | 1 | - |
| intron-exon | PEF1-AS1 | 1 | - | PEF1 | 1 | - |
| intron-exon | PEF1-AS1 | 1 | - | PEF1 | 1 | - |
| intron-exon | PEF1-AS1 | 1 | - | PEF1 | 1 | - |
| intron-exon | PEF1-AS1 | 1 | - | PEF1 | 1 | - |
| intron-exon | PEF1-AS1 | 1 | - | PEF1 | 1 | - |
| intron-exon | PEF1-AS1 | 1 | - | PEF1 | 1 | - |
| exon-exon | PEF1-AS1 | 1 | - | PEF1 | 1 | - |
| exon-exon | PEF1-AS1 | 1 | - | PEF1 | 1 | - |
| exon-exon | PEF1-AS1 | 1 | - | PEF1 | 1 | - |
| exon-exon | PEF1-AS1 | 1 | - | PEF1 | 1 | - |
| exon-intron | PEG10 | 7 | - | RNA28SP | 21 | + |
| exon-exon | PELATON | 20 | - | LYZ | 12 | - |
| exon-intron | PELI3 | 11 | + | LOC101928069 | 11 | + |
| exon-exon | PELI3 | 11 | + | LOC101928069 | 11 | + |
| intron-exon | PELI3 | 11 | - | MRPL11 | 11 | - |
| intron-exon | PEMT | 17 | - | EEF1A1P5 | 9 | - |
| exon-intron | PER1 | 17 | - | IKBKB | 8 | + |
| exon-exon | PET100 | 19 | + | STXBP2 | 19 | + |
| exon-exon | PET117 | 20 | + | KAT14 | 20 | + |
| exon-exon | PEX11B | 1 | - | DNAJC11 | 1 | - |
| intron-exon | PEX11G | 19 | + | TEX45 | 19 | + |
| exon-exon | PEX12 | 17 | + | AP2B1 | 17 | + |
| exon-exon | PEX26 | 22 | + | TUBA8 | 22 | + |
| intron-exon | PFAS | 17 | - | CTC1 | 17 | - |
| exon-intron | PFAS | 17 | - | NLK | 17 | + |
| exon-exon | PFDN5 | 12 | + | MYG1-AS1 | 12 | + |
| exon-intron | PFDN6 | 6 | + | ASCC2 | 22 | + |
| exon-intron | PFDN6 | 6 | + | RGL2 | 6 | + |
| exon-exon | PFDN6 | 6 | + | RAVER1 | 19 | - |
| exon-exon | PFDN6 | 6 | + | RAVER1 | 19 | - |
| exon-intron | PFKM | 12 | + | HERC2P8 | 16 | - |
| exon-intron | PFN1 | 17 | - | TAB2 | 6 | + |
| exon-intron | PFN2 | 3 | + | LOC646903 | 3 | + |
| exon-exon | PGA3 | 11 | + | PGA4 | 11 | + |
| exon-exon | PGA3 | 11 | + | PGA5 | 11 | + |
| exon-intron | PGA3 | 11 | + | SQOR | 15 | + |
| exon-exon | PGA5 | 11 | - | PGA4 | 11 | - |
| exon-exon | PGAM1 | 10 | + | LOC643576 | 12 | + |
| intron-exon | PGAM2 | 7 | - | DBNL | 7 | - |
| intron-exon | PGAP4 | 9 | - | TMEM246-AS1 | 9 | - |
| intron-exon | PGAP4 | 9 | - | TMEM246-AS1 | 9 | - |
| intron-exon | PGAP4 | 9 | - | TMEM246-AS1 | 9 | - |
| intron-exon | PGAP4 | 9 | - | TMEM246-AS1 | 9 | - |
| intron-exon | PGAP4 | 9 | - | TMEM246-AS1 | 9 | - |
| intron-exon | PGAP4 | 9 | - | TMEM246-AS1 | 9 | - |
| intron-exon | PGAP4 | 9 | - | TMEM246-AS1 | 9 | - |
| intron-exon | PGAP4 | 9 | - | TMEM246-AS1 | 9 | - |
| intron-exon | PGAP4 | 9 | - | TMEM246-AS1 | 9 | - |
| intron-exon | PGAP4 | 9 | - | TMEM246-AS1 | 9 | - |
| exon-intron | PGD | 1 | + | ERVMER61-1 | 1 | - |
| intron-exon | PGD | 1 | - | KIF1B | 1 | - |
| intron-exon | PGD | 1 | - | KIF1B | 1 | - |
| exon-exon | PGF | 14 | + | LOC107984690 | 14 | + |
| intron-exon | PGM5P2 | 9 | - | FRG1HP | 9 | - |
| intron-exon | PGP | 16 | + | CSNK1D | 17 | - |
| exon-exon | PGR-AS1 | 11 | - | PGR | 11 | - |
| exon-exon | PHACTR3 | 20 | + | SYCP2 | 20 | - |
| exon-intron | PHACTR4 | 1 | + | TNRC6B | 22 | + |
| exon-intron | PHACTR4 | 1 | - | CCDC43 | 17 | - |
| exon-exon | PHB | 17 | + | PHBP11 | 1 | + |
| intron-exon | PHC1 | 12 | + | M6PR | 12 | + |
| exon-intron | PHC3 | 3 | + | LOC105374209 | 3 | + |
| intron-exon | PHF10 | 6 | - | C6orf120 | 6 | - |
| exon-intron | PHF12 | 17 | + | LOC101927018 | 17 | + |
| intron-exon | PHF13 | 1 | - | KLHL21 | 1 | - |
| exon-exon | PHF3 | 6 | + | EYS | 6 | + |
| exon-exon | PHF3 | 6 | - | PHF3 | 6 | + |
| exon-intron | PHKB | 16 | + | GPHN | 14 | + |
| intron-exon | PHKB | 16 | - | ITFG1 | 16 | - |
| exon-intron | PHKG1 | 7 | - | CUL5 | 11 | - |
| exon-exon | PHKG1 | 7 | - | GPATCH1 | 19 | - |
| exon-exon | PHLDA1 | 12 | + | PHLDA1 | 12 | - |
| exon-exon | PHOSPHO2 | 2 | + | KLHL23 | 2 | + |
| exon-exon | PHYHD1 | 9 | + | NUP188 | 9 | + |
| intron-exon | PHYKPL | 5 | - | RAD23A | 19 | + |
| intron-exon | PHYKPL | 5 | - | HNRNPAB | 5 | - |
| intron-exon | PHYKPL | 5 | - | HNRNPAB | 5 | - |
| intron-exon | PHYKPL | 5 | - | HNRNPAB | 5 | - |
| intron-exon | PHYKPL | 5 | - | HNRNPAB | 5 | - |
| intron-exon | PHYKPL | 5 | - | HNRNPAB | 5 | - |
| intron-exon | PHYKPL | 5 | - | HNRNPAB | 5 | - |
| intron-exon | PHYKPL | 5 | - | HNRNPAB | 5 | - |
| intron-exon | PHYKPL | 5 | - | HNRNPAB | 5 | - |
| intron-exon | PHYKPL | 5 | - | HNRNPAB | 5 | - |
| intron-exon | PHYKPL | 5 | - | HNRNPAB | 5 | - |
| intron-exon | PHYKPL | 5 | - | HNRNPAB | 5 | - |
| intron-exon | PHYKPL | 5 | - | HNRNPAB | 5 | - |
| exon-exon | PI4KA | 22 | + | HNRNPA2B1 | 7 | - |
| intron-exon | PI4KA | 22 | + | SERPIND1 | 22 | + |
| exon-exon | PI4KA | 22 | + | GBP3 | 1 | - |
| exon-intron | PI4KAP2 | 22 | - | LOC105375773 | 8 | + |
| exon-exon | PIAS3 | 1 | + | ANKRD35 | 1 | + |
| exon-exon | PIAS3 | 1 | - | NUDT17 | 1 | - |
| intron-exon | PICALM | 11 | - | ZFAND5 | 9 | + |
| exon-intron | PIEZO1 | 16 | + | LOC100289580 | 16 | + |
| exon-intron | PIEZO1 | 16 | + | LOC100289580 | 16 | + |
| intron-exon | PIEZO2 | 18 | + | KEAP1 | 19 | - |
| intron-exon | PIGBOS1 | 15 | + | PIGB | 15 | + |
| exon-exon | PIGH | 14 | - | PLEKHH1 | 14 | - |
| exon-exon | PIGH | 14 | - | PLEKHH1 | 14 | - |
| intron-exon | PIGK | 1 | + | RPL17P6 | 1 | + |
| intron-exon | PIGK | 1 | + | RPL17P39 | 15 | - |
| intron-exon | PIGL | 17 | - | NCOR1 | 17 | - |
| exon-exon | PIGT | 20 | + | LOC105372631 | 20 | + |
| intron-exon | PIGU | 20 | + | GOLGA2 | 9 | + |
| intron-exon | PIGU | 20 | + | GOLGA2 | 9 | + |
| exon-intron | PIGW | 17 | - | TSPAN1 | 1 | + |
| exon-exon | PIGY | 4 | + | PYURF | 4 | + |
| intron-exon | PIH1D2 | 11 | - | DLAT | 11 | - |
| intron-exon | PIH1D2 | 11 | - | DLAT | 11 | - |
| intron-exon | PIH1D2 | 11 | - | DLAT | 11 | - |
| exon-intron | PIK3C2A | 11 | - | CNN2 | 19 | + |
| exon-exon | PIK3C2B | 1 | + | LOC107987206 | 14 | + |
| intron-exon | PIK3C2B | 1 | + | CXorf65 | X | - |
| intron-exon | PIK3C2G | 12 | - | RERGL | 12 | - |
| intron-exon | PIK3CD | 1 | - | SMIM14 | 4 | - |
| exon-exon | PILRB | 7 | - | PVRIG2P | 7 | - |
| exon-exon | PILRB | 7 | - | PVRIG2P | 7 | - |
| exon-exon | PILRB | 7 | - | STAG3L5P | 7 | - |
| exon-intron | PIM1 | 6 | - | GBF1 | 10 | - |
| exon-intron | PIM2 | X | - | AC025946.1 | 10 | + |
| exon-intron | PIN4 | X | + | CITED1 | X | + |
| intron-exon | PINK1-AS | 1 | + | DDOST | 1 | + |
| intron-exon | PINK1-AS | 1 | - | PINK1 | 1 | - |
| intron-exon | PINLYP | 19 | - | XRCC1 | 19 | - |
| intron-exon | PINLYP | 19 | - | XRCC1 | 19 | - |
| intron-exon | PINLYP | 19 | - | XRCC1 | 19 | - |
| intron-exon | PINLYP | 19 | - | XRCC1 | 19 | - |
| intron-exon | PINLYP | 19 | - | XRCC1 | 19 | - |
| intron-exon | PINLYP | 19 | - | XRCC1 | 19 | - |
| intron-exon | PINLYP | 19 | - | XRCC1 | 19 | - |
| intron-exon | PINLYP | 19 | - | XRCC1 | 19 | - |
| intron-exon | PINLYP | 19 | - | XRCC1 | 19 | - |
| intron-exon | PINLYP | 19 | - | XRCC1 | 19 | - |
| intron-exon | PINLYP | 19 | - | XRCC1 | 19 | - |
| intron-exon | PINLYP | 19 | - | XRCC1 | 19 | - |
| intron-exon | PINLYP | 19 | - | XRCC1 | 19 | - |
| intron-exon | PINLYP | 19 | - | XRCC1 | 19 | - |
| intron-exon | PINLYP | 19 | - | XRCC1 | 19 | - |
| intron-exon | PINLYP | 19 | - | XRCC1 | 19 | - |
| intron-exon | PINLYP | 19 | - | XRCC1 | 19 | - |
| intron-exon | PINLYP | 19 | - | XRCC1 | 19 | - |
| intron-exon | PINLYP | 19 | - | XRCC1 | 19 | - |
| intron-exon | PINLYP | 19 | - | XRCC1 | 19 | - |
| intron-exon | PINLYP | 19 | - | XRCC1 | 19 | - |
| exon-exon | PINX1 | 8 | - | SOX7 | 8 | - |
| exon-exon | PIP4K2B | 17 | - | APBA3 | 19 | - |
| exon-exon | PIR | X | - | VEGFD | X | - |
| intron-exon | PIR | X | - | PIR-FIGF | X | - |
| exon-intron | PIR | X | - | PIR-FIGF | X | - |
| exon-exon | PIR | X | - | PIR-FIGF | X | - |
| exon-exon | PIR | X | - | PIR-FIGF | X | - |
| exon-intron | PIR | X | - | PIR-FIGF | X | - |
| exon-exon | PIR | X | - | PIR-FIGF | X | - |
| exon-exon | PIR | X | - | PIR-FIGF | X | - |
| exon-intron | PIR | X | - | PIR-FIGF | X | - |
| exon-exon | PIR | X | - | PIR-FIGF | X | - |
| exon-intron | PIR | X | - | PIR-FIGF | X | - |
| exon-exon | PIR | X | - | PIR-FIGF | X | - |
| exon-exon | PIR | X | - | PIR-FIGF | X | - |
| exon-intron | PIR | X | - | PIR-FIGF | X | - |
| exon-exon | PIR | X | - | PIR-FIGF | X | - |
| exon-exon | PIR | X | - | PIR-FIGF | X | - |
| exon-intron | PIR | X | - | PIR-FIGF | X | - |
| exon-intron | PIR | X | - | PIR-FIGF | X | - |
| exon-exon | PIR | X | - | PIR-FIGF | X | - |
| intron-exon | PIR-FIGF | X | + | PIR-FIGF | X | - |
| intron-exon | PIR-FIGF | X | + | BMX | X | + |
| exon-exon | PIR-FIGF | X | - | PIR-FIGF | X | - |
| exon-exon | PITPNA | 17 | - | PITPNA-AS1 | 17 | - |
| exon-intron | PITPNA | 17 | - | PITPNA-AS1 | 17 | - |
| exon-intron | PITRM1 | 10 | + | PITRM1-AS1 | 10 | + |
| exon-intron | PITRM1 | 10 | - | DEFB1 | 8 | + |
| exon-exon | PJVK | 2 | - | PRKRA | 2 | - |
| exon-exon | PKD1 | 16 | + | LOC105371049 | 16 | + |
| exon-intron | PKD1 | 16 | + | LOC105371049 | 16 | + |
| exon-exon | PKD1P1 | 16 | + | PKD1P2 | 16 | + |
| exon-intron | PKD1P3 | 16 | + | NPIPA1 | 16 | + |
| exon-intron | PKD1P3 | 16 | + | NPIPA1 | 16 | + |
| exon-exon | PKD1P3 | 16 | + | NPIPA1 | 16 | + |
| exon-exon | PKD1P4-NPIPA8 | 16 | + | PKD1P4-NPIPA8 | 16 | + |
| exon-exon | PKD1P5-LOC105376752 | 16 | + | CDC42BPB | 14 | - |
| intron-exon | PKD1P6 | 16 | - | NPIPP1 | 16 | - |
| intron-exon | PKD1P6 | 16 | - | NPIPP1 | 16 | - |
| intron-exon | PKD1P6 | 16 | - | PKD1P6-NPIPP1 | 16 | - |
| intron-exon | PKD1P6 | 16 | - | PDXDC1 | 16 | - |
| intron-exon | PKD1P6 | 16 | - | PDXDC1 | 16 | - |
| intron-exon | PKD1P6 | 16 | - | PDXDC1 | 16 | - |
| exon-exon | PKD1P6-NPIPP1 | 16 | - | PKD1P6-NPIPP1 | 16 | - |
| exon-exon | PKD1P6-NPIPP1 | 16 | - | PKD1P6-NPIPP1 | 16 | - |
| exon-exon | PKD1P6-NPIPP1 | 16 | - | PKD1P6-NPIPP1 | 16 | - |
| exon-exon | PKIG | 20 | + | PKIG | 20 | - |
| exon-exon | PKM | 15 | + | SAFB | 19 | - |
| exon-intron | PKM | 15 | + | CHD6 | 20 | - |
| exon-intron | PKM | 15 | + | NUP214 | 9 | - |
| exon-intron | PKM | 15 | - | ZFPM2-AS1 | 8 | + |
| exon-intron | PKM | 15 | - | AC092723.3 | 16 | + |
| intron-exon | PKMYT1 | 16 | - | PAQR4 | 16 | - |
| intron-exon | PKMYT1 | 16 | - | PAQR4 | 16 | - |
| intron-exon | PKMYT1 | 16 | - | PAQR4 | 16 | - |
| exon-exon | PKMYT1 | 16 | - | PAQR4 | 16 | - |
| exon-exon | PKMYT1 | 16 | - | PAQR4 | 16 | - |
| exon-intron | PKNOX1 | 21 | + | GPM6B | X | + |
| intron-exon | PKP4-AS1 | 2 | - | PKP4 | 2 | - |
| intron-exon | PKP4-AS1 | 2 | - | PKP4 | 2 | - |
| intron-exon | PKP4-AS1 | 2 | - | PKP4 | 2 | - |
| intron-exon | PKP4-AS1 | 2 | - | PKP4 | 2 | - |
| intron-exon | PKP4-AS1 | 2 | - | PKP4 | 2 | - |
| intron-exon | PKP4-AS1 | 2 | - | PKP4 | 2 | - |
| intron-exon | PKP4-AS1 | 2 | - | PKP4 | 2 | - |
| intron-exon | PKP4-AS1 | 2 | - | PKP4 | 2 | - |
| intron-exon | PKP4-AS1 | 2 | - | PKP4 | 2 | - |
| intron-exon | PKP4-AS1 | 2 | - | PKP4 | 2 | - |
| intron-exon | PKP4-AS1 | 2 | - | PKP4 | 2 | - |
| intron-exon | PKP4-AS1 | 2 | - | PKP4 | 2 | - |
| intron-exon | PKP4-AS1 | 2 | - | PKP4 | 2 | - |
| exon-intron | PLA2G12A | 4 | + | OLA1 | 2 | + |
| exon-intron | PLA2G15 | 16 | - | YTHDC2 | 5 | + |
| exon-exon | PLA2G2A | 1 | + | AFDN | 6 | - |
| exon-exon | PLA2G2A | 1 | + | AFDN | 6 | - |
| exon-exon | PLA2G4B | 15 | - | JMJD7 | 15 | - |
| exon-exon | PLA2G4C-AS1 | 19 | + | PLA2G4C | 19 | + |
| exon-exon | PLA2G4F | 15 | - | NEAT1 | 11 | + |
| exon-exon | PLA2G7 | 6 | - | TDRD6 | 6 | - |
| exon-intron | PLAC4 | 21 | - | C2CD2 | 21 | - |
| exon-intron | PLAC9P1 | 2 | + | LINC01856 | 2 | + |
| intron-exon | PLBD2 | 12 | - | SLC8B1 | 12 | - |
| exon-exon | PLCG1-AS1 | 20 | + | PLCG1 | 20 | + |
| intron-exon | PLCG1-AS1 | 20 | - | TOP1 | 20 | - |
| intron-exon | PLCG1-AS1 | 20 | - | TOP1 | 20 | - |
| exon-exon | PLCXD1 | Y | + | GTPBP6 | Y | + |
| exon-intron | PLCXD1 | Y | + | GTPBP6 | Y | + |
| exon-intron | PLCXD1 | Y | + | GTPBP6 | Y | + |
| exon-intron | PLCXD1 | Y | + | PAAF1 | 11 | + |
| exon-intron | PLCXD1 | Y | + | KCNH5 | 14 | - |
| exon-intron | PLD3 | 19 | - | AP005212.4 | 18 | - |
| exon-intron | PLD3 | 19 | - | AP005212.4 | 18 | - |
| exon-intron | PLEK2 | 14 | - | GPHN | 14 | - |
| exon-exon | PLEKHA2 | 8 | - | PLEKHA2 | 8 | + |
| intron-exon | PLEKHA4 | 19 | - | GRWD1 | 19 | - |
| intron-exon | PLEKHA7 | 11 | + | DSP | 6 | - |
| exon-exon | PLEKHA8 | 7 | + | PLEKHA8P1 | 12 | - |
| intron-exon | PLEKHB2 | 2 | - | FAR2P4 | 2 | - |
| exon-intron | PLEKHG7 | 12 | + | EEA1 | 12 | + |
| exon-intron | PLEKHH1 | 14 | + | GPHN | 14 | + |
| exon-exon | PLEKHO1 | 1 | + | LOC105371433 | 1 | + |
| exon-intron | PLEKHS1 | 10 | + | AC093831.1 | 4 | - |
| exon-intron | PLGLA | 2 | + | RGPD3 | 2 | + |
| exon-intron | PLGLA | 2 | + | RGPD3 | 2 | + |
| exon-exon | PLGLB1 | 2 | - | RGPD3 | 2 | + |
| exon-exon | PLGLB1 | 2 | - | RGPD4 | 2 | - |
| exon-exon | PLGLB2 | 2 | + | RGPD3 | 2 | + |
| exon-intron | PLGLB2 | 2 | + | RGPD1 | 2 | - |
| exon-intron | PLIN3 | 19 | + | MYCBP2 | 13 | + |
| exon-intron | PLP2 | X | + | PRICKLE3 | X | + |
| exon-intron | PLP2 | X | + | PCBD2 | 5 | - |
| exon-exon | PLP2 | X | + | PRICKLE3 | X | - |
| exon-intron | PLP2 | X | + | PRICKLE3 | X | + |
| intron-exon | PLPPR1 | 9 | + | EGFR | 7 | + |
| exon-exon | PLPPR3 | 19 | - | PTBP1 | 19 | - |
| exon-exon | PLPPR3 | 19 | - | PTBP1 | 19 | - |
| exon-exon | PLPPR3 | 19 | - | PTBP1 | 19 | - |
| exon-exon | PLPPR3 | 19 | - | PTBP1 | 19 | - |
| exon-exon | PLPPR3 | 19 | - | PTBP1 | 19 | - |
| exon-exon | PLPPR3 | 19 | - | PTBP1 | 19 | - |
| exon-exon | PLPPR3 | 19 | - | PTBP1 | 19 | - |
| exon-exon | PLPPR3 | 19 | - | PTBP1 | 19 | - |
| exon-exon | PLPPR3 | 19 | - | PTBP1 | 19 | - |
| exon-exon | PLPPR3 | 19 | - | PTBP1 | 19 | - |
| exon-exon | PLPPR3 | 19 | - | PTBP1 | 19 | - |
| exon-exon | PLPPR3 | 19 | - | PTBP1 | 19 | - |
| exon-exon | PLPPR3 | 19 | - | PTBP1 | 19 | - |
| exon-exon | PLPPR3 | 19 | - | PTBP1 | 19 | - |
| exon-exon | PLPPR3 | 19 | - | PTBP1 | 19 | - |
| exon-exon | PLPPR3 | 19 | - | PTBP1 | 19 | - |
| exon-exon | PLPPR3 | 19 | - | PTBP1 | 19 | - |
| exon-exon | PLPPR3 | 19 | - | PTBP1 | 19 | - |
| exon-exon | PLPPR3 | 19 | - | PTBP1 | 19 | - |
| exon-exon | PLPPR3 | 19 | - | PTBP1 | 19 | - |
| exon-exon | PLPPR3 | 19 | - | PTBP1 | 19 | - |
| exon-exon | PLPPR3 | 19 | - | PTBP1 | 19 | - |
| exon-exon | PLPPR3 | 19 | - | PTBP1 | 19 | - |
| exon-exon | PLPPR3 | 19 | - | PTBP1 | 19 | - |
| exon-exon | PLPPR3 | 19 | - | PTBP1 | 19 | - |
| exon-exon | PLPPR3 | 19 | - | PTBP1 | 19 | - |
| exon-exon | PLPPR3 | 19 | - | PTBP1 | 19 | - |
| exon-exon | PLPPR3 | 19 | - | TALAM1 | 11 | - |
| intron-exon | PLS3-AS1 | X | + | PLS3 | X | + |
| exon-exon | PLTP | 20 | - | CTSA | 20 | - |
| exon-exon | PLTP | 20 | - | CTSA | 20 | - |
| exon-exon | PLTP | 20 | - | CTSA | 20 | - |
| exon-exon | PLTP | 20 | - | CTSA | 20 | - |
| exon-exon | PLTP | 20 | - | CTSA | 20 | - |
| exon-intron | PLTP | 20 | - | CTSA | 20 | - |
| intron-exon | PLXDC1 | 17 | - | RDM1P5 | 17 | - |
| intron-exon | PLXDC1 | 17 | - | RDM1P5 | 17 | - |
| exon-intron | PLXNB3 | X | + | TIAM1 | 21 | + |
| exon-exon | PM20D2 | 6 | - | PNRC1 | 6 | - |
| exon-exon | PM20D2 | 6 | - | PNRC1 | 6 | - |
| exon-exon | PMF1 | 1 | + | BGLAP | 1 | + |
| exon-exon | PMF1 | 1 | + | BGLAP | 1 | + |
| exon-exon | PMF1-BGLAP | 1 | - | PMF1-BGLAP | 1 | - |
| exon-intron | PML | 15 | - | STOML1 | 15 | - |
| exon-exon | PMP22 | 17 | + | PMP22 | 17 | - |
| exon-exon | PMS1 | 2 | - | ORMDL1 | 2 | - |
| exon-exon | PMS1 | 2 | - | ORMDL1 | 2 | - |
| exon-exon | PMS1 | 2 | - | ORMDL1 | 2 | - |
| exon-exon | PMS1 | 2 | - | ORMDL1 | 2 | - |
| exon-exon | PMS1 | 2 | - | ORMDL1 | 2 | - |
| exon-exon | PMS1 | 2 | - | ORMDL1 | 2 | - |
| exon-exon | PMS1 | 2 | - | ORMDL1 | 2 | - |
| exon-exon | PMS1 | 2 | - | ORMDL1 | 2 | - |
| intron-exon | PMS2CL | 7 | - | PMS2 | 7 | - |
| exon-exon | PMS2P1 | 7 | - | DMTF1 | 7 | - |
| exon-intron | PMS2P3 | 7 | - | POLR2J4 | 7 | - |
| exon-intron | PMS2P3 | 7 | - | POLR2J4 | 7 | - |
| intron-exon | PMS2P4 | 7 | + | SPDYE21 | 7 | + |
| exon-exon | PMS2P5 | 7 | - | PMS2P8 | 7 | - |
| intron-exon | PMS2P6 | 7 | + | SPDYE11 | 7 | + |
| intron-exon | PMS2P6 | 7 | + | SPDYE10P | 7 | + |
| intron-exon | PMS2P6 | 7 | + | SPDYE11 | 7 | + |
| exon-intron | PMS2P7 | 7 | + | PMS2P6 | 7 | + |
| exon-intron | PMS2P7 | 7 | + | AC211476.3 | 7 | + |
| exon-intron | PMS2P7 | 7 | + | AC211476.5 | 7 | + |
| intron-exon | PMS2P7 | 7 | + | SPDYE9 | 7 | + |
| exon-intron | PMS2P8 | 7 | + | AC211476.3 | 7 | + |
| exon-exon | PMS2P9 | 7 | - | DTX2P1-UPK3BP1-PMS2P11 | 7 | - |
| exon-intron | PMVK | 1 | - | LOC105376695 | 1 | + |
| exon-intron | PNISR | 6 | + | OSBPL2 | 20 | - |
| intron-exon | PNISR | 6 | - | QRSL1 | 6 | + |
| intron-exon | PNKD | 2 | + | LMOD3 | 3 | - |
| exon-exon | PNMA2 | 8 | - | KIAA0319L | 1 | - |
| intron-exon | PNMA3 | X | - | PNMA5 | X | - |
| exon-exon | PNPT1 | 2 | - | PNPT1 | 2 | + |
| exon-exon | PNRC1 | 6 | + | EZR | 6 | - |
| exon-exon | PNRC1 | 6 | + | PM20D2 | 6 | + |
| exon-exon | POC1B-GALNT4 | 12 | - | POC1B | 12 | - |
| exon-intron | POC1B-GALNT4 | 12 | - | POC1B | 12 | - |
| exon-intron | POC1B-GALNT4 | 12 | - | POC1B | 12 | - |
| exon-intron | POC1B-GALNT4 | 12 | - | POC1B | 12 | - |
| exon-intron | POC1B-GALNT4 | 12 | - | POC1B | 12 | - |
| exon-exon | POFUT1 | 20 | - | PSEN1 | 14 | - |
| exon-exon | POFUT1 | 20 | - | PSEN1 | 14 | - |
| exon-intron | POGLUT1 | 3 | + | PPP3CA | 4 | + |
| exon-intron | POLA2 | 11 | - | CAPN1 | 11 | - |
| exon-intron | POLA2 | 11 | - | CAPN1 | 11 | - |
| exon-exon | POLD3 | 11 | - | LOC100287896 | 11 | - |
| exon-exon | POLD3 | 11 | - | LOC100287896 | 11 | - |
| exon-exon | POLD3 | 11 | - | LOC100287896 | 11 | - |
| exon-exon | POLDIP2 | 17 | + | TMEM199 | 17 | + |
| exon-exon | POLDIP2 | 17 | - | TNFAIP1 | 17 | - |
| exon-exon | POLDIP2 | 17 | - | TNFAIP1 | 17 | - |
| exon-exon | POLDIP2 | 17 | - | TNFAIP1 | 17 | - |
| exon-intron | POLDIP3 | 22 | + | THA1P | 17 | - |
| intron-exon | POLDIP3 | 22 | - | GOLGA3 | 12 | - |
| intron-exon | POLE3 | 9 | + | C9orf43 | 9 | + |
| exon-exon | POLH | 6 | + | GTPBP2 | 6 | + |
| exon-intron | POLH | 6 | - | CRIP3 | 6 | - |
| exon-intron | POLH | 6 | - | LOC105375065 | 6 | - |
| exon-exon | POLL | 10 | + | DPCD | 10 | + |
| exon-exon | POLM | 7 | + | POLM | 7 | - |
| exon-intron | POLR1A | 2 | - | PILRA | 7 | + |
| exon-exon | POLR1D | 13 | - | LNX2 | 13 | - |
| exon-intron | POLR1G | 19 | + | ZNF41 | X | - |
| exon-exon | POLR1G | 19 | + | ERCC1 | 19 | + |
| intron-exon | POLR2B | 4 | + | IGFBP7 | 4 | + |
| intron-exon | POLR2F | 22 | + | PIH1D1 | 19 | - |
| exon-exon | POLR2H | 3 | + | CTSE | 1 | + |
| exon-intron | POLR2I | 19 | + | TBCB | 19 | + |
| exon-exon | POLR2J | 7 | + | POLR2J4 | 7 | + |
| exon-exon | POLR2J | 7 | + | POLR2J2 | 7 | + |
| exon-exon | POLR2J | 7 | + | POLR2J4 | 7 | + |
| exon-exon | POLR2J | 7 | - | LRWD1 | 7 | - |
| exon-intron | POLR2J2 | 7 | - | POLR2J3 | 7 | - |
| exon-exon | POLR2J2 | 7 | - | RASA4 | 7 | - |
| exon-intron | POLR2J2 | 7 | - | RASA4 | 7 | - |
| exon-exon | POLR2J2 | 7 | - | RASA4 | 7 | - |
| exon-intron | POLR2J2 | 7 | - | POLR2J3 | 7 | - |
| exon-exon | POLR2J2 | 7 | - | RASA4B | 7 | - |
| exon-exon | POLR2J2 | 7 | - | RASA4 | 7 | - |
| exon-intron | POLR2J2 | 7 | - | RASA4 | 7 | - |
| exon-exon | POLR2J2 | 7 | - | RASA4 | 7 | - |
| exon-exon | POLR2J2 | 7 | - | RASA4 | 7 | - |
| exon-intron | POLR2J2 | 7 | - | RASA4 | 7 | - |
| exon-exon | POLR2J3 | 7 | - | RASA4B | 7 | - |
| exon-exon | POLR2J3 | 7 | - | RASA4B | 7 | - |
| exon-exon | POLR2J3 | 7 | - | RASA4B | 7 | - |
| exon-exon | POLR2J3 | 7 | - | RASA4B | 7 | - |
| exon-exon | POLR2J3 | 7 | - | RASA4B | 7 | - |
| exon-intron | POLR2J3 | 7 | - | RASA4B | 7 | - |
| exon-intron | POLR2J3 | 7 | - | RASA4B | 7 | - |
| intron-exon | POLR2J3 | 7 | - | RASA4B | 7 | - |
| exon-intron | POLR2J4 | 7 | - | UBE2D4 | 7 | - |
| exon-intron | POLR2L | 11 | - | CD151 | 11 | - |
| exon-exon | POLR3C | 1 | - | RNF115 | 1 | - |
| exon-intron | POLR3D | 8 | + | LOC100507071 | 8 | + |
| exon-intron | POLR3D | 8 | + | LOC100507071 | 8 | + |
| intron-exon | POLR3F | 20 | - | DZANK1 | 20 | - |
| intron-exon | POLR3F | 20 | - | DZANK1 | 20 | - |
| exon-exon | POLR3H | 22 | - | ACO2 | 22 | - |
| exon-exon | POLR3H | 22 | - | ACO2 | 22 | - |
| exon-exon | POLR3H | 22 | - | ACO2 | 22 | - |
| exon-exon | POLR3H | 22 | - | ACO2 | 22 | - |
| exon-exon | POLR3H | 22 | - | ACO2 | 22 | - |
| exon-exon | POLR3H | 22 | - | ACO2 | 22 | - |
| exon-exon | POLR3H | 22 | - | ACO2 | 22 | - |
| exon-exon | POLR3H | 22 | - | ACO2 | 22 | - |
| exon-exon | POLR3H | 22 | - | ACO2 | 22 | - |
| exon-exon | POLR3H | 22 | - | ACO2 | 22 | - |
| exon-exon | POLR3H | 22 | - | ACO2 | 22 | - |
| exon-exon | POLR3H | 22 | - | ACO2 | 22 | - |
| exon-exon | POLR3H | 22 | - | ACO2 | 22 | - |
| exon-exon | POLR3H | 22 | - | ACO2 | 22 | - |
| exon-exon | POLR3H | 22 | - | ACO2 | 22 | - |
| exon-exon | POLR3H | 22 | - | ACO2 | 22 | - |
| exon-exon | POLR3H | 22 | - | ACO2 | 22 | - |
| exon-exon | POLR3H | 22 | - | ACO2 | 22 | - |
| exon-exon | POLR3H | 22 | - | ACO2 | 22 | - |
| exon-exon | POLR3H | 22 | - | ACO2 | 22 | - |
| exon-exon | POM121 | 7 | + | POMZP3 | 7 | - |
| exon-exon | POM121 | 7 | + | POM121B | 7 | + |
| intron-exon | POM121B | 7 | + | NSUN5 | 7 | + |
| exon-intron | POM121B | 7 | - | LOC105375503 | 7 | - |
| intron-exon | POM121L11P | 22 | - | BCR | 22 | - |
| intron-exon | POM121L11P | 22 | - | BCR | 22 | - |
| intron-exon | POM121L11P | 22 | - | BCR | 22 | - |
| intron-exon | POM121L11P | 22 | - | BCR | 22 | - |
| intron-exon | POM121L11P | 22 | - | BCR | 22 | - |
| intron-exon | POM121L11P | 22 | - | BCR | 22 | - |
| intron-exon | POM121L7P | 22 | + | GGT2 | 22 | - |
| intron-exon | POMGNT1 | 1 | - | TSPAN1 | 1 | - |
| exon-intron | PON2 | 7 | - | TANGO6 | 16 | - |
| exon-exon | PON3 | 7 | + | SLC30A1 | 1 | + |
| exon-exon | PON3 | 7 | - | PON1 | 7 | - |
| exon-exon | POPDC2 | 3 | + | COX17 | 3 | + |
| exon-intron | POPDC2 | 3 | + | LOC105374063 | 3 | + |
| exon-intron | POPDC2 | 3 | + | COX17 | 3 | + |
| exon-exon | POTEI | 2 | - | POTEF | 2 | - |
| exon-intron | POU2AF1 | 11 | - | TMC1 | 9 | - |
| exon-exon | POU2F2 | 19 | - | POU2F2 | 19 | + |
| intron-exon | POU5F1 | 6 | - | TCF19 | 6 | - |
| intron-exon | PP2D1 | 3 | - | RAB5A | 3 | - |
| exon-exon | PPAN | 19 | + | P2RY11 | 19 | + |
| exon-exon | PPAN | 19 | + | P2RY11 | 19 | + |
| exon-exon | PPAN-P2RY11 | 19 | + | EIF3G | 19 | + |
| exon-exon | PPARA | 22 | + | PPARA | 22 | - |
| exon-exon | PPDPF | 20 | - | HNRNPD | 4 | + |
| intron-exon | PPFIA2 | 12 | + | PPFIA2-AS1 | 12 | + |
| exon-exon | PPFIA4 | 1 | - | SYT2 | 1 | + |
| exon-exon | PPFIBP1 | 12 | + | ALK | 2 | - |
| exon-intron | PPHLN1 | 12 | + | LOC105378029 | 6 | - |
| exon-exon | PPHLN1 | 12 | - | ZCRB1 | 12 | - |
| exon-exon | PPHLN1 | 12 | - | ZCRB1 | 12 | - |
| exon-exon | PPHLN1 | 12 | - | PPHLN1 | 12 | + |
| exon-exon | PPIA | 7 | + | LOC105375260 | 7 | + |
| exon-intron | PPIA | 7 | - | CD38 | 4 | - |
| exon-intron | PPIAP14 | 18 | - | RP11-172F10.1 | 18 | - |
| exon-intron | PPIB | 15 | - | NFATC3 | 16 | + |
| exon-intron | PPIB | 15 | - | MYO18B | 22 | + |
| exon-exon | PPIB | 15 | - | SNX22 | 15 | - |
| exon-exon | PPIB | 15 | - | SNX22 | 15 | - |
| exon-intron | PPIB | 15 | - | MYO18B | 22 | + |
| exon-exon | PPIB | 15 | - | LOC105375884 | 8 | + |
| exon-intron | PPIB | 15 | - | AF241726.2 | X | + |
| exon-intron | PPIB | 15 | - | GNG7 | 19 | - |
| exon-intron | PPIB | 15 | - | LINC02413 | 12 | + |
| exon-intron | PPIB | 15 | - | LOC105373643 | 2 | + |
| exon-exon | PPIB | 15 | - | LOC105375884 | 8 | + |
| exon-intron | PPIB | 15 | - | NCAPH2 | 22 | + |
| exon-exon | PPIB | 15 | - | SNX22 | 15 | - |
| exon-exon | PPIB | 15 | - | SNX22 | 15 | - |
| exon-intron | PPIB | 15 | - | CTCF | 16 | + |
| exon-intron | PPIB | 15 | - | RELL1 | 4 | + |
| exon-intron | PPIB | 15 | - | LOC105375864 | 8 | + |
| exon-exon | PPIB | 15 | - | SNX22 | 15 | - |
| exon-intron | PPID | 4 | - | YJU2 | 19 | - |
| exon-intron | PPIL1 | 6 | - | C6orf89 | 6 | - |
| intron-exon | PPIL1 | 6 | - | HMGA1 | 6 | + |
| exon-intron | PPIL3 | 2 | - | LRR1 | 14 | + |
| intron-exon | PPIP5K1P1 | 15 | - | CATSPER2 | 15 | - |
| exon-exon | PPIP5K1P1 | 15 | - | CATSPER2 | 15 | - |
| exon-exon | PPIP5K1P1-CATSPER2 | 15 | - | PPIP5K1P1-CATSPER2 | 15 | - |
| intron-exon | PPL | 16 | + | LOC105371064 | 16 | + |
| exon-exon | PPM1G | 2 | + | MYH9 | 22 | + |
| exon-exon | PPM1J | 1 | - | RHOC | 1 | - |
| exon-exon | PPM1J | 1 | - | RHOC | 1 | - |
| exon-intron | PPM1J | 1 | - | RHOC | 1 | - |
| exon-intron | PPM1J | 1 | - | RHOC | 1 | - |
| exon-intron | PPM1J | 1 | - | RHOC | 1 | - |
| exon-exon | PPM1J | 1 | - | RHOC | 1 | - |
| exon-intron | PPP1CC | 12 | - | CELF2 | 10 | - |
| exon-intron | PPP1R11 | 6 | + | RNF39 | 6 | + |
| exon-exon | PPP1R11 | 6 | + | RNF39 | 6 | + |
| exon-intron | PPP1R11 | 6 | + | POU2F1 | 1 | - |
| exon-exon | PPP1R12B | 1 | - | PPP1R12B | 1 | + |
| intron-exon | PPP1R13L | 19 | + | DYNLL2 | 17 | - |
| exon-intron | PPP1R14B | 11 | + | PPP1R14B-AS1 | 11 | + |
| intron-exon | PPP1R14B-AS1 | 11 | - | PPP1R14B | 11 | - |
| exon-exon | PPP1R15A | 19 | + | PTMA | 2 | + |
| exon-exon | PPP1R18 | 6 | + | PNMA5 | X | + |
| exon-intron | PPP1R26-AS1 | 9 | + | PPP1R26-AS1 | 9 | - |
| exon-intron | PPP1R32 | 11 | - | AP003108.2 | 11 | - |
| exon-exon | PPP1R32 | 11 | - | SDHAF2 | 11 | - |
| exon-exon | PPP1R32 | 11 | - | SDHAF2 | 11 | - |
| exon-intron | PPP1R32 | 11 | - | SDHAF2 | 11 | - |
| exon-exon | PPP1R35 | 7 | + | PPP1R35-AS1 | 7 | + |
| exon-intron | PPP1R35 | 7 | + | PPP1R35-AS1 | 7 | + |
| intron-exon | PPP1R3E | 14 | + | BCL2L2-PABPN1 | 14 | + |
| exon-exon | PPP1R3E | 14 | - | HOMEZ | 14 | - |
| exon-intron | PPP2CA | 5 | + | SAMD12 | 8 | + |
| exon-exon | PPP2CA | 5 | - | SKP1 | 5 | - |
| exon-exon | PPP2CA | 5 | - | SKP1 | 5 | - |
| exon-exon | PPP2CA | 5 | - | SKP1 | 5 | - |
| exon-exon | PPP2CA | 5 | - | SKP1 | 5 | - |
| exon-exon | PPP2CB | 8 | + | KIAA1109 | 4 | - |
| exon-exon | PPP2CB | 8 | - | COL1A2 | 7 | - |
| intron-exon | PPP2R1A | 19 | + | ZNF480 | 19 | + |
| exon-exon | PPP2R1A | 19 | + | PSMB5 | 14 | - |
| exon-exon | PPP2R2A | 8 | + | PCMTD1 | 8 | - |
| intron-exon | PPP2R3C | 14 | + | PRORP | 14 | + |
| exon-exon | PPP2R3C | 14 | + | PRORP | 14 | + |
| exon-intron | PPP2R3C | 14 | + | PRORP | 14 | + |
| exon-exon | PPP4R2 | 3 | - | GXYLT2 | 3 | - |
| intron-exon | PPP5C | 19 | - | HIF3A | 19 | - |
| exon-exon | PPP6R2 | 22 | + | PPP1R13L | 19 | - |
| exon-intron | PPP6R2 | 22 | + | SBF1 | 22 | + |
| intron-exon | PPP6R2 | 22 | - | INTS3 | 1 | - |
| intron-exon | PPP6R2 | 22 | - | INTS3 | 1 | - |
| intron-exon | PPP6R2 | 22 | - | INTS3 | 1 | - |
| intron-exon | PPP6R2 | 22 | - | INTS3 | 1 | - |
| intron-exon | PPP6R2 | 22 | - | INTS3 | 1 | - |
| intron-exon | PPP6R3 | 11 | - | RNA45SN3 | 21 | + |
| exon-exon | PPT1 | 1 | - | CAP1 | 1 | - |
| exon-exon | PPT1 | 1 | - | CAP1 | 1 | - |
| exon-intron | PPT2 | 6 | + | EGFL8 | 6 | + |
| exon-intron | PPT2 | 6 | + | PPT2-EGFL8 | 6 | + |
| exon-exon | PPT2 | 6 | + | PPT2-EGFL8 | 6 | + |
| exon-exon | PRAMEF18 | 1 | - | PRAMEF26 | 1 | - |
| exon-exon | PRANCR | 12 | + | CNOT2 | 12 | + |
| exon-exon | PRANCR | 12 | + | CNOT2 | 12 | + |
| exon-exon | PRB1 | 12 | - | PRB4 | 12 | - |
| exon-exon | PRB1 | 12 | - | PRB4 | 12 | - |
| exon-exon | PRB2 | 12 | - | PRB1 | 12 | - |
| exon-exon | PRC1 | 15 | + | PRC1-AS1 | 15 | + |
| exon-exon | PRC1 | 15 | + | PRC1-AS1 | 15 | + |
| exon-exon | PRC1 | 15 | + | PRC1-AS1 | 15 | + |
| exon-intron | PRC1 | 15 | + | PRC1-AS1 | 15 | + |
| exon-intron | PRC1 | 15 | + | PRC1-AS1 | 15 | + |
| exon-intron | PRC1 | 15 | + | PRC1-AS1 | 15 | + |
| exon-exon | PRDM1 | 6 | - | HSP90AA1 | 14 | - |
| exon-exon | PRDM4 | 12 | + | LOC101929162 | 12 | + |
| exon-exon | PRDM4 | 12 | + | LOC101929162 | 12 | + |
| exon-exon | PRDM4 | 12 | + | LOC101929162 | 12 | + |
| exon-exon | PRDM4 | 12 | + | LOC101929162 | 12 | + |
| exon-exon | PRDX1 | 1 | + | KIAA2026 | 9 | + |
| exon-exon | PRDX2 | 19 | - | KIAA1522 | 1 | - |
| exon-exon | PREB | 2 | - | PREB | 2 | + |
| exon-exon | PRELID3B | 20 | - | ATP5F1E | 20 | - |
| exon-exon | PRELID3B | 20 | - | ATP5F1E | 20 | - |
| exon-exon | PRELP | 1 | - | RNA45SN1 | 21 | - |
| exon-intron | PREPL | 2 | - | SLC3A1 | 2 | - |
| exon-exon | PREPL | 2 | - | SLC3A1 | 2 | - |
| exon-exon | PRG4 | 1 | + | TPR | 1 | + |
| exon-exon | PRH1 | 12 | - | PRR4 | 12 | - |
| exon-exon | PRH1 | 12 | - | PRR4 | 12 | - |
| exon-exon | PRH1 | 12 | - | PRR4 | 12 | - |
| exon-exon | PRH1 | 12 | - | PRR4 | 12 | - |
| exon-exon | PRH1-PRR4 | 12 | + | FRYL | 4 | + |
| intron-exon | PRH1-PRR4 | 12 | + | PRH2 | 12 | + |
| exon-exon | PRH1-PRR4 | 12 | - | PRH1-PRR4 | 12 | - |
| exon-exon | PRH1-PRR4 | 12 | - | PRH1-PRR4 | 12 | - |
| exon-exon | PRH1-PRR4 | 12 | - | PRH1-PRR4 | 12 | - |
| exon-exon | PRH1-PRR4 | 12 | - | PRH1-PRR4 | 12 | - |
| exon-exon | PRH1-PRR4 | 12 | - | PRH1-PRR4 | 12 | - |
| exon-exon | PRH1-PRR4 | 12 | - | PRH2 | 12 | + |
| exon-exon | PRH1-PRR4 | 12 | - | PRH1-PRR4 | 12 | - |
| exon-exon | PRICKLE2 | 3 | - | TCEA3 | 1 | - |
| exon-exon | PRICKLE3 | X | - | PLP2 | X | - |
| exon-intron | PRICKLE3 | X | - | PLP2 | X | - |
| exon-exon | PRICKLE3 | X | - | PLP2 | X | - |
| exon-exon | PRICKLE3 | X | - | PLP2 | X | - |
| exon-exon | PRICKLE3 | X | - | PLP2 | X | - |
| exon-intron | PRICKLE3 | X | - | PLP2 | X | - |
| exon-exon | PRICKLE4 | 6 | + | TOMM6 | 6 | + |
| exon-exon | PRICKLE4 | 6 | + | TOMM6 | 6 | + |
| exon-exon | PRICKLE4 | 6 | + | TOMM6 | 6 | + |
| exon-exon | PRKAG2-AS1 | 7 | - | PRKAG2 | 7 | - |
| intron-exon | PRKAR1A | 17 | + | PDE8A | 15 | - |
| exon-exon | PRKAR2A-AS1 | 3 | - | PRKAR2A | 3 | - |
| exon-intron | PRKAR2B | 7 | + | ELOVL2 | 6 | - |
| exon-exon | PRKCH | 14 | + | FLJ22447 | 14 | + |
| exon-exon | PRKCQ | 10 | + | PRKCQ-AS1 | 10 | + |
| intron-exon | PRKD2 | 19 | - | DACT3-AS1 | 19 | - |
| intron-exon | PRKRA | 2 | - | CHROMR | 2 | - |
| exon-exon | PRKRA | 2 | - | FAH | 15 | + |
| exon-exon | PRKRIP1 | 7 | - | LOC100289561 | 7 | - |
| exon-intron | PRKX | X | - | SMG1P2 | 16 | - |
| exon-intron | PRLR | 5 | - | SYMPK | 19 | + |
| exon-intron | PRM1 | 16 | - | LOC105371082 | 16 | - |
| exon-intron | PRM1 | 16 | - | LOC105371082 | 16 | - |
| exon-intron | PRM1 | 16 | - | LOC105371082 | 16 | - |
| exon-intron | PRM2 | 16 | - | LOC105371082 | 16 | - |
| exon-intron | PRM2 | 16 | - | LOC105371082 | 16 | - |
| exon-intron | PRM2 | 16 | - | LOC105371082 | 16 | - |
| intron-exon | PRMT5-AS1 | 14 | + | PRMT5 | 14 | - |
| exon-intron | PRNCR1 | 8 | - | PCAT2 | 8 | - |
| intron-exon | PRODH2 | 19 | + | ZFP14 | 19 | + |
| intron-exon | PRPF38A | 1 | + | TUT4 | 1 | + |
| intron-exon | PRPF38A | 1 | + | TUT4 | 1 | + |
| exon-exon | PRPF40B | 12 | + | FAM186B | 12 | + |
| exon-exon | PRPSAP1 | 17 | - | STAG2 | X | + |
| exon-exon | PRPSAP2 | 17 | - | LFNG | 7 | + |
| exon-exon | PRR11 | 17 | + | SMG8 | 17 | + |
| exon-exon | PRR11 | 17 | - | SKA2 | 17 | - |
| exon-intron | PRR12 | 19 | + | NUMBL | 19 | - |
| exon-exon | PRR12 | 19 | + | NUMBL | 19 | - |
| exon-exon | PRR13 | 12 | + | PCBP2 | 12 | + |
| exon-exon | PRR13 | 12 | + | PCBP2 | 12 | + |
| exon-intron | PRR23A | 3 | + | MRPS22 | 3 | + |
| exon-intron | PRR27 | 4 | + | LOC105377270 | 4 | + |
| exon-intron | PRR3 | 6 | + | VPS13B | 8 | + |
| exon-exon | PRR5 | 22 | + | ARHGAP8 | 22 | + |
| intron-exon | PRR7-AS1 | 5 | - | GRK6 | 5 | - |
| intron-exon | PRR7-AS1 | 5 | - | GRK6 | 5 | - |
| intron-exon | PRR7-AS1 | 5 | - | GRK6 | 5 | - |
| intron-exon | PRR7-AS1 | 5 | - | GRK6 | 5 | - |
| intron-exon | PRR7-AS1 | 5 | - | GRK6 | 5 | - |
| intron-exon | PRR7-AS1 | 5 | - | GRK6 | 5 | - |
| intron-exon | PRR7-AS1 | 5 | - | GRK6 | 5 | - |
| intron-exon | PRR7-AS1 | 5 | - | GRK6 | 5 | - |
| intron-exon | PRR7-AS1 | 5 | - | GRK6 | 5 | - |
| intron-exon | PRR7-AS1 | 5 | - | GRK6 | 5 | - |
| intron-exon | PRR7-AS1 | 5 | - | GRK6 | 5 | - |
| exon-intron | PRRC2A | 6 | + | TEC | 4 | + |
| exon-exon | PRRG1 | X | + | TSPAN7 | X | + |
| exon-intron | PRRG4 | 11 | + | AHNAK | 11 | - |
| exon-intron | PRRT1 | 6 | + | PPT2 | 6 | + |
| exon-intron | PRRT1B | 9 | + | RPS19 | 19 | + |
| exon-intron | PRSS1 | 7 | + | PRSS3P1 | 7 | + |
| exon-exon | PRSS23 | 11 | - | CANX | 5 | + |
| exon-intron | PRSS40A | 2 | + | NPHP4 | 1 | + |
| exon-exon | PRSS44P | 3 | - | PRSS43P | 3 | - |
| exon-exon | PRSS53 | 16 | - | ZNF646 | 16 | - |
| exon-exon | PRUNE2 | 9 | - | ACTC1 | 15 | - |
| exon-exon | PSAP | 10 | - | ACP5 | 19 | - |
| exon-exon | PSCA | 8 | - | JRK | 8 | - |
| exon-intron | PSEN1 | 14 | + | PRKX | X | - |
| exon-exon | PSG1 | 19 | + | PSG7 | 19 | + |
| exon-exon | PSG1 | 19 | + | PSG4 | 19 | + |
| exon-exon | PSG1 | 19 | + | PSG7 | 19 | + |
| exon-exon | PSG1 | 19 | + | PSG11 | 19 | + |
| exon-exon | PSG1 | 19 | - | PSG3 | 19 | - |
| exon-exon | PSG1 | 19 | - | PSG8 | 19 | - |
| intron-exon | PSG1 | 19 | - | PSG8 | 19 | - |
| exon-exon | PSG1 | 19 | - | PSG10P | 19 | - |
| exon-exon | PSG1 | 19 | - | PSG3 | 19 | - |
| exon-intron | PSG1 | 19 | - | PSG10P | 19 | - |
| exon-exon | PSG11 | 19 | - | PSG3 | 19 | - |
| exon-exon | PSG2 | 19 | + | PSG4 | 19 | + |
| exon-exon | PSG2 | 19 | + | PSG9 | 19 | + |
| exon-exon | PSG2 | 19 | - | PSG3 | 19 | - |
| intron-exon | PSG2 | 19 | - | PSG3 | 19 | - |
| exon-exon | PSG3 | 19 | + | PSG6 | 19 | + |
| exon-exon | PSG3 | 19 | + | PSG11 | 19 | + |
| exon-exon | PSG3 | 19 | + | PSG6 | 19 | + |
| exon-exon | PSG3 | 19 | + | PSG1 | 19 | + |
| exon-exon | PSG4 | 19 | + | LOC284344 | 19 | + |
| exon-exon | PSG4 | 19 | - | PSG2 | 19 | - |
| exon-intron | PSG4 | 19 | - | PSG11 | 19 | - |
| exon-exon | PSG4 | 19 | - | PSG1 | 19 | - |
| exon-intron | PSG4 | 19 | - | PSG11 | 19 | - |
| exon-intron | PSG4 | 19 | - | PSG11 | 19 | - |
| exon-intron | PSG4 | 19 | - | PSG11 | 19 | - |
| exon-intron | PSG4 | 19 | - | PSG10P | 19 | - |
| exon-exon | PSG4 | 19 | - | PSG5 | 19 | - |
| exon-intron | PSG4 | 19 | - | PSG11 | 19 | - |
| exon-exon | PSG4 | 19 | - | PSG2 | 19 | - |
| exon-intron | PSG4 | 19 | - | PSG2 | 19 | - |
| exon-intron | PSG5 | 19 | - | LOC107985349 | 19 | - |
| exon-exon | PSG6 | 19 | - | PSG3 | 19 | - |
| exon-exon | PSG7 | 19 | - | PSG8 | 19 | - |
| exon-exon | PSG7 | 19 | - | PSG8 | 19 | - |
| exon-exon | PSG7 | 19 | - | PSG8 | 19 | - |
| exon-exon | PSG8 | 19 | + | PSG7 | 19 | + |
| exon-exon | PSG8 | 19 | - | PSG3 | 19 | - |
| exon-exon | PSG8 | 19 | - | PSG3 | 19 | - |
| exon-exon | PSG9 | 19 | - | PSG1 | 19 | - |
| exon-exon | PSG9 | 19 | - | PSG11 | 19 | - |
| exon-exon | PSG9 | 19 | - | PSG1 | 19 | - |
| exon-exon | PSG9 | 19 | - | PSG1 | 19 | - |
| exon-exon | PSMA2 | 7 | - | C7orf25 | 7 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | PSMA3 | 14 | - |
| intron-exon | PSMA3-AS1 | 14 | - | ARMH4 | 14 | - |
| exon-intron | PSMA4 | 15 | + | SLC2A5 | 1 | + |
| intron-exon | PSMA8 | 18 | + | MSH3 | 5 | + |
| exon-intron | PSMB1 | 6 | - | AL035401.1 | 6 | + |
| exon-exon | PSMB10 | 16 | - | CTRL | 16 | - |
| exon-exon | PSMB7 | 9 | + | LOC100129034 | 9 | + |
| exon-exon | PSMB7 | 9 | + | LOC100129034 | 9 | + |
| exon-exon | PSMB7 | 9 | + | LOC100129034 | 9 | + |
| exon-exon | PSMB7 | 9 | + | LOC100129034 | 9 | + |
| exon-intron | PSMB8 | 6 | + | PSMB8-AS1 | 6 | + |
| exon-intron | PSMC2 | 7 | + | SLC26A5 | 7 | + |
| exon-exon | PSMC3IP | 17 | - | MLX | 17 | - |
| exon-exon | PSMC3IP | 17 | - | MLX | 17 | - |
| intron-exon | PSMC3IP | 17 | - | MLX | 17 | - |
| exon-exon | PSMC3IP | 17 | - | MLX | 17 | - |
| exon-exon | PSMC3IP | 17 | - | MLX | 17 | - |
| exon-exon | PSMC3IP | 17 | - | MLX | 17 | - |
| exon-exon | PSMC3IP | 17 | - | MLX | 17 | - |
| intron-exon | PSMC6 | 14 | - | ERO1A | 14 | - |
| exon-intron | PSMD1 | 2 | + | TRB | 7 | + |
| exon-exon | PSMD2 | 3 | + | HDAC10 | 22 | - |
| exon-exon | PSMD2 | 3 | - | INPP1 | 2 | - |
| exon-exon | PSMD4 | 1 | - | SUSD6 | 14 | - |
| exon-exon | PSMD4 | 1 | - | SUSD6 | 14 | - |
| exon-exon | PSMD6 | 3 | + | ZNF646 | 16 | + |
| exon-intron | PSMD7 | 16 | + | STXBP1 | 9 | + |
| exon-intron | PSMD8 | 19 | + | LINC01926 | 18 | + |
| exon-exon | PSMD9 | 12 | + | CFAP251 | 12 | + |
| intron-exon | PSME2 | 14 | + | RNF31 | 14 | + |
| exon-exon | PSME2 | 14 | - | ANKRD46 | 8 | - |
| exon-exon | PSME2 | 14 | - | ANKRD46 | 8 | - |
| exon-exon | PSME2 | 14 | - | ANKRD46 | 8 | - |
| exon-exon | PSME3IP1 | 16 | - | FAM192BP | 4 | + |
| exon-exon | PSME4 | 2 | + | TBC1D23 | 3 | - |
| exon-intron | PSMG3 | 7 | + | TRIM55 | 8 | - |
| intron-exon | PSMG4 | 6 | - | TUBB2B | 6 | - |
| exon-intron | PSPC1 | 13 | - | LOC105374494 | 4 | - |
| intron-exon | PSPC1P2 | 13 | - | LOC101927375 | 13 | - |
| exon-intron | PSPHP1 | 7 | - | LANCL2 | 7 | - |
| exon-intron | PSPHP1 | 7 | - | LANCL2 | 7 | - |
| exon-intron | PSPHP1 | 7 | - | LANCL2 | 7 | - |
| exon-intron | PSTPIP2 | 18 | + | KMO | 1 | - |
| exon-intron | PSTPIP2 | 18 | - | EPG5 | 18 | - |
| exon-intron | PSTPIP2 | 18 | - | EPG5 | 18 | - |
| exon-intron | PSTPIP2 | 18 | - | EPG5 | 18 | - |
| exon-exon | PTAFR | 1 | + | PHACTR4 | 1 | + |
| exon-exon | PTBP3 | 9 | + | PTBP3 | 9 | - |
| exon-exon | PTENP1-AS | 9 | - | PTENP1 | 9 | - |
| exon-exon | PTER | 10 | - | ANXA10 | 4 | + |
| exon-exon | PTGER3 | 1 | + | ZRANB2-AS1 | 1 | + |
| exon-exon | PTGES3L | 17 | - | AARSD1 | 17 | - |
| intron-exon | PTGES3L | 17 | - | AARSD1 | 17 | - |
| exon-exon | PTGES3L | 17 | - | AARSD1 | 17 | - |
| exon-intron | PTGES3P1 | 1 | - | YY1 | 14 | - |
| exon-exon | PTGIR | 19 | - | CALM3 | 19 | - |
| exon-exon | PTGIR | 19 | - | CALM3 | 19 | - |
| exon-exon | PTGIR | 19 | - | CALM3 | 19 | - |
| exon-exon | PTGIR | 19 | - | CALM3 | 19 | - |
| exon-exon | PTGIR | 19 | - | CALM3 | 19 | + |
| exon-exon | PTGIR | 19 | - | CALM3 | 19 | - |
| exon-exon | PTGIR | 19 | - | CALM3 | 19 | - |
| exon-exon | PTGIR | 19 | - | CALM3 | 19 | - |
| exon-exon | PTGIR | 19 | - | CALM3 | 19 | - |
| exon-exon | PTGIR | 19 | - | CALM3 | 19 | - |
| exon-exon | PTGIR | 19 | - | CALM3 | 19 | - |
| exon-intron | PTGIR | 19 | - | SCN3A | 2 | + |
| intron-exon | PTGR1 | 9 | - | ZNF483 | 9 | - |
| intron-exon | PTH1R | 3 | - | MYL3 | 3 | - |
| exon-exon | PTH2R | 2 | + | LOC101927960 | 2 | + |
| exon-intron | PTK2 | 8 | - | CLTC | 17 | - |
| exon-intron | PTK7 | 6 | - | DLGAP4-AS1 | 20 | - |
| exon-exon | PTMA | 2 | + | PTMA | 2 | - |
| exon-intron | PTMA | 2 | - | GLCCI1 | 7 | - |
| exon-intron | PTMAP9 | 12 | + | BCL2L14 | 12 | + |
| intron-exon | PTMS | 12 | - | MLF2 | 12 | - |
| intron-exon | PTMS | 12 | - | MLF2 | 12 | - |
| intron-exon | PTMS | 12 | - | MLF2 | 12 | - |
| intron-exon | PTN | 7 | + | ND6 | MT | - |
| exon-intron | PTN | 7 | - | CERS4 | 19 | - |
| exon-intron | PTOV1-AS1 | 19 | - | LOC220729 | 3 | + |
| intron-exon | PTOV1-AS2 | 19 | - | PTOV1 | 19 | - |
| intron-exon | PTOV1-AS2 | 19 | - | PTOV1 | 19 | - |
| intron-exon | PTOV1-AS2 | 19 | - | PTOV1 | 19 | - |
| exon-exon | PTOV1-AS2 | 19 | - | PTOV1 | 19 | - |
| exon-exon | PTOV1-AS2 | 19 | - | PTOV1 | 19 | - |
| intron-exon | PTP4A2 | 1 | + | MBP | 18 | - |
| exon-intron | PTP4A2 | 1 | - | SNHG14 | 15 | + |
| exon-intron | PTP4A2 | 1 | - | PTP4A2P1 | 17 | + |
| intron-exon | PTPA | 9 | - | CRAT | 9 | - |
| exon-intron | PTPDC1 | 9 | - | LINC02197 | 5 | - |
| exon-exon | PTPMT1 | 11 | + | NDUFS3 | 11 | + |
| exon-intron | PTPN11 | 12 | - | AC007207.2 | 12 | + |
| exon-exon | PTPN12 | 7 | - | CKAP5 | 11 | + |
| intron-exon | PTPN21 | 14 | + | LOC105370614 | 14 | + |
| exon-intron | PTPN6 | 12 | - | MPP7 | 10 | + |
| exon-intron | PTPN9 | 15 | + | LOC105370902 | 15 | + |
| exon-exon | PTPN9 | 15 | + | SNUPN | 15 | + |
| exon-exon | PTPN9 | 15 | - | BUB3 | 10 | + |
| exon-exon | PTPRA | 20 | - | VPS16 | 20 | - |
| exon-exon | PTPRA | 20 | - | VPS16 | 20 | - |
| exon-exon | PTPRA | 20 | - | VPS16 | 20 | - |
| intron-exon | PTPRB | 12 | + | LOC105369828 | 12 | + |
| exon-intron | PTPRB | 12 | + | LOC105369828 | 12 | + |
| exon-intron | PTPRB | 12 | + | LOC105369828 | 12 | + |
| exon-exon | PTPRD | 9 | - | RBM39 | 20 | - |
| intron-exon | PTPRD | 9 | - | NFIB | 9 | + |
| exon-exon | PTPRF | 1 | - | PTPRF | 1 | + |
| intron-exon | PTPRG | 3 | + | FAM168A | 11 | - |
| intron-exon | PTPRN2 | 7 | + | PTPRN2-AS1 | 7 | + |
| intron-exon | PTRH1 | 9 | + | CFAP157 | 9 | + |
| exon-exon | PTRH1 | 9 | - | STXBP1 | 9 | - |
| intron-exon | PTRH1 | 9 | - | STXBP1 | 9 | - |
| intron-exon | PTRHD1 | 2 | + | LOC105369164 | 2 | + |
| intron-exon | PTRHD1 | 2 | + | LOC105369164 | 2 | + |
| exon-exon | PTRHD1 | 2 | + | CENPO | 2 | + |
| exon-exon | PTRHD1 | 2 | + | CENPO | 2 | + |
| exon-exon | PTS | 11 | + | RPS6P16 | 11 | + |
| exon-exon | PTTG1IP | 21 | + | CES2 | 16 | + |
| intron-exon | PTTG1IP | 21 | + | ELF2 | 4 | - |
| intron-exon | PUDPP2 | 1 | - | TCHH | 1 | - |
| intron-exon | PUDPP2 | 1 | - | TCHH | 1 | - |
| intron-exon | PUDPP2 | 1 | - | TCHH | 1 | - |
| intron-exon | PUDPP2 | 1 | - | TCHH | 1 | - |
| exon-intron | PUM1 | 1 | + | RPL7L1 | 6 | - |
| exon-intron | PUM1 | 1 | - | MIR519A2 | 19 | + |
| intron-exon | PUM2 | 2 | - | ZFAT | 8 | - |
| intron-exon | PUS10 | 2 | + | PEX13 | 2 | + |
| exon-intron | PUS10 | 2 | - | RPS12P3 | 2 | - |
| exon-exon | PUS10 | 2 | - | RPS12P3 | 2 | - |
| intron-exon | PUSL1 | 1 | - | ACAP3 | 1 | - |
| exon-exon | PVR | 19 | + | CEACAM19 | 19 | + |
| exon-intron | PVRIG2P | 7 | + | PILRB | 7 | + |
| exon-exon | PVT1 | 8 | + | LINC00824 | 8 | - |
| exon-exon | PVT1 | 8 | + | LINC00824 | 8 | - |
| exon-intron | PVT1 | 8 | + | LINC02055 | 8 | - |
| exon-exon | PVT1 | 8 | + | LINC00824 | 8 | - |
| exon-exon | PVT1 | 8 | + | LINC00824 | 8 | - |
| intron-exon | PVT1 | 8 | + | LINC00824 | 8 | - |
| intron-exon | PVT1 | 8 | - | TSR1 | 17 | + |
| intron-exon | PWWP2A | 5 | - | TTC1 | 5 | - |
| intron-exon | PWWP2A | 5 | - | TTC1 | 5 | - |
| intron-exon | PWWP2A | 5 | - | TTC1 | 5 | - |
| intron-exon | PWWP2A | 5 | - | TTC1 | 5 | - |
| intron-exon | PWWP2A | 5 | - | TTC1 | 5 | - |
| intron-exon | PWWP2A | 5 | - | TTC1 | 5 | - |
| intron-exon | PWWP2A | 5 | - | TTC1 | 5 | - |
| intron-exon | PWWP2A | 5 | - | C11orf16 | 11 | - |
| exon-exon | PXMP2 | 12 | + | PGAM5 | 12 | + |
| exon-intron | PXMP4 | 20 | - | NECAB3 | 20 | - |
| exon-exon | PXN | 12 | - | PXN-AS1 | 12 | - |
| intron-exon | PXN | 12 | - | PXN-AS1 | 12 | - |
| exon-exon | PXN | 12 | - | PXN-AS1 | 12 | - |
| exon-exon | PXN-AS1 | 12 | + | PXN | 12 | + |
| exon-intron | PYCARD | 16 | + | PYCARD-AS1 | 16 | + |
| exon-intron | PYCARD | 16 | + | PYCARD-AS1 | 16 | + |
| exon-intron | PYCR1 | 17 | - | KIF1C | 17 | - |
| exon-exon | PYCR2 | 1 | - | INS-IGF2 | 11 | - |
| exon-exon | PYGO2 | 1 | + | LOC101928120 | 1 | + |
| exon-exon | PYGO2 | 1 | + | SHC1 | 1 | + |
| intron-exon | PYGO2 | 1 | + | SHC1 | 1 | + |
| intron-exon | PYM1 | 12 | + | DGKA | 12 | + |
| exon-exon | PYURF | 4 | + | PIGY | 4 | + |
| exon-intron | PYY2 | 17 | - | LOC105371710 | 17 | - |
| exon-exon | QARS1 | 3 | + | QARS1 | 3 | - |
| exon-intron | QPCT | 2 | + | DHX32 | 10 | - |
| intron-exon | R3HDM1 | 2 | + | LOC107985946 | 2 | + |
| exon-intron | RAB11A | 15 | + | MEGF11 | 15 | + |
| exon-exon | RAB11B-AS1 | 19 | + | RAB11B | 19 | + |
| exon-exon | RAB11B-AS1 | 19 | + | RAB11B | 19 | + |
| exon-exon | RAB11B-AS1 | 19 | + | RAB11B | 19 | + |
| exon-exon | RAB11FIP2 | 10 | + | HMGXB4 | 22 | - |
| exon-intron | RAB13 | 1 | - | VSIR | 10 | - |
| exon-intron | RAB13 | 1 | - | AL358472.6 | 1 | - |
| intron-exon | RAB19 | 7 | - | SLC37A3 | 7 | - |
| exon-intron | RAB1A | 2 | - | CEP68 | 2 | - |
| exon-exon | RAB1B | 11 | + | LOC107984340 | 11 | + |
| exon-exon | RAB1B | 11 | + | LOC107984340 | 11 | + |
| exon-exon | RAB1B | 11 | + | LOC107984340 | 11 | + |
| exon-intron | RAB2A | 8 | + | CAMKK1 | 17 | - |
| exon-intron | RAB30-DT | 11 | + | PKHD1 | 6 | - |
| intron-exon | RAB33A | X | - | ELF4 | X | - |
| intron-exon | RAB33B | 4 | - | LOC107984036 | 4 | - |
| exon-exon | RAB34 | 17 | + | RAB34 | 17 | - |
| exon-exon | RAB3GAP1 | 2 | + | LOC105369706 | 12 | + |
| exon-exon | RAB3GAP1 | 2 | + | CHMP1A | 16 | - |
| intron-exon | RAB3GAP2 | 1 | + | MORF4L1P1 | 1 | + |
| intron-exon | RAB3GAP2 | 1 | + | MORF4L1P1 | 1 | + |
| intron-exon | RAB3GAP2 | 1 | + | MORF4L1P1 | 1 | + |
| intron-exon | RAB3IP | 12 | - | LOC101928002 | 12 | - |
| intron-exon | RAB3IP | 12 | - | LOC101928002 | 12 | - |
| exon-exon | RAB43 | 3 | + | ISY1 | 3 | + |
| exon-intron | RAB43 | 3 | + | ISY1 | 3 | + |
| exon-exon | RAB43P1 | 16 | + | RAB43P1 | 16 | - |
| exon-exon | RAB4B | 19 | + | EGLN2 | 19 | + |
| exon-intron | RAB5A | 3 | + | TPRG1 | 3 | - |
| exon-exon | RAB5C | 17 | - | KAT2A | 17 | - |
| exon-exon | RAB5C | 17 | - | KAT2A | 17 | - |
| exon-exon | RAB5C | 17 | - | KAT2A | 17 | - |
| exon-intron | RAB5IF | 20 | + | SLA2 | 20 | + |
| exon-exon | RAB5IF | 20 | - | TGIF2-RAB5IF | 20 | - |
| exon-exon | RAB5IF | 20 | - | TGIF2-RAB5IF | 20 | - |
| exon-exon | RAB5IF | 20 | - | ADGRL3 | 4 | - |
| exon-intron | RAB8A | 19 | + | HSH2D | 19 | + |
| exon-exon | RAB9B | X | + | PLP1 | X | + |
| intron-exon | RABEP1 | 17 | + | EIF4G1 | 3 | - |
| intron-exon | RABEP1 | 17 | + | EIF4G1 | 3 | - |
| intron-exon | RABEP1 | 17 | + | EIF4G1 | 3 | - |
| intron-exon | RABEP1 | 17 | + | EIF4G1 | 3 | - |
| intron-exon | RABEP1 | 17 | + | EIF4G1 | 3 | - |
| exon-exon | RABGGTB | 1 | - | ACADM | 1 | - |
| exon-exon | RABGGTB | 1 | - | ACADM | 1 | - |
| exon-exon | RABL2A | 2 | - | FXN | 9 | + |
| exon-intron | RAC1 | 7 | + | AL163051.1 | 14 | - |
| exon-intron | RAC1 | 7 | + | LINC01622 | 6 | + |
| exon-exon | RAC1 | 7 | - | RAC1P2 | 4 | + |
| exon-intron | RAC2 | 22 | - | POLR2F | 22 | - |
| exon-intron | RACK1 | 5 | + | LOC101927179 | 4 | + |
| exon-exon | RACK1 | 5 | - | TUBA1C | 12 | - |
| exon-intron | RACK1 | 5 | - | LOC101926964 | 1 | - |
| intron-exon | RAD21 | 8 | - | UTP23 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-intron | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-intron | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-intron | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-intron | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-intron | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-intron | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-intron | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-intron | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21-AS1 | 8 | - | RAD21 | 8 | - |
| exon-exon | RAD21L1 | 20 | + | SNPH | 20 | + |
| intron-exon | RAD50 | 5 | - | IRF1-AS1 | 5 | - |
| intron-exon | RAD51L3-RFFL | 17 | - | RFFL | 17 | - |
| intron-exon | RAD51L3-RFFL | 17 | - | RFFL | 17 | - |
| intron-exon | RAD51L3-RFFL | 17 | - | RFFL | 17 | - |
| intron-exon | RAD51L3-RFFL | 17 | - | RFFL | 17 | - |
| intron-exon | RAD51L3-RFFL | 17 | - | RFFL | 17 | - |
| intron-exon | RAD51L3-RFFL | 17 | - | RFFL | 17 | - |
| intron-exon | RAD51L3-RFFL | 17 | - | RFFL | 17 | - |
| intron-exon | RAD51L3-RFFL | 17 | - | RFFL | 17 | - |
| intron-exon | RAD51L3-RFFL | 17 | - | RFFL | 17 | - |
| intron-exon | RAD51L3-RFFL | 17 | - | RFFL | 17 | - |
| exon-exon | RAD51L3-RFFL | 17 | - | RAD51D | 17 | - |
| exon-exon | RAD51L3-RFFL | 17 | - | RAD51D | 17 | - |
| exon-exon | RAD51L3-RFFL | 17 | - | RAD51D | 17 | - |
| exon-intron | RAD51L3-RFFL | 17 | - | RAD51D | 17 | - |
| exon-intron | RAD51L3-RFFL | 17 | - | RAD51D | 17 | - |
| exon-intron | RAD51L3-RFFL | 17 | - | RAD51D | 17 | - |
| exon-exon | RAD51L3-RFFL | 17 | - | RAD51D | 17 | - |
| exon-intron | RAD51L3-RFFL | 17 | - | RAD51D | 17 | - |
| exon-intron | RAD51L3-RFFL | 17 | - | RAD51D | 17 | - |
| exon-exon | RAD51L3-RFFL | 17 | - | RAD51D | 17 | - |
| exon-exon | RAD52 | 12 | - | WNK1 | 12 | - |
| exon-exon | RAD52 | 12 | - | WNK1 | 12 | - |
| exon-exon | RAD52 | 12 | - | WNK1 | 12 | - |
| exon-exon | RAD52 | 12 | - | WNK1 | 12 | - |
| exon-exon | RAD52 | 12 | - | WNK1 | 12 | - |
| intron-exon | RAD52 | 12 | - | WNK1 | 12 | - |
| exon-exon | RAD54B | 8 | + | HNRNPA2B1 | 7 | - |
| intron-exon | RAD54L | 1 | + | LRRC41 | 1 | + |
| intron-exon | RAD54L | 1 | + | LRRC41 | 1 | + |
| exon-exon | RAD54L2 | 3 | + | TEX264 | 3 | + |
| exon-exon | RAD54L2 | 3 | + | TEX264 | 3 | + |
| exon-exon | RAD9B | 12 | - | VPS29 | 12 | - |
| exon-exon | RAET1E | 6 | - | LRP11 | 6 | - |
| intron-exon | RAET1G | 6 | - | RAET1E | 6 | - |
| intron-exon | RAF1 | 3 | - | MSS51 | 10 | - |
| exon-exon | RAG1 | 11 | + | SP3 | 2 | - |
| exon-intron | RAI14 | 5 | - | LOC105371198 | 16 | + |
| intron-exon | RALGAPA2 | 20 | - | ATP6 | MT | - |
| exon-intron | RALGPS1 | 9 | - | LOC102723568 | 11 | + |
| exon-exon | RAMP1 | 2 | + | GANAB | 11 | - |
| exon-exon | RAMP2-AS1 | 17 | + | RAMP2 | 17 | + |
| exon-exon | RAMP2-AS1 | 17 | + | RAMP2 | 17 | + |
| exon-exon | RAN | 12 | + | RANP1 | 6 | + |
| exon-intron | RAN | 12 | + | ITPA | 20 | + |
| exon-intron | RANBP1 | 22 | + | SLC23A2 | 20 | + |
| intron-exon | RANBP2 | 2 | + | RGPD5 | 2 | + |
| exon-exon | RANBP9 | 6 | - | NOL7 | 6 | - |
| intron-exon | RANBP9 | 6 | - | NOL7 | 6 | - |
| exon-exon | RAP1B | 12 | + | RAP1BL | 5 | - |
| exon-exon | RAP1B | 12 | + | RAP1BL | 5 | - |
| intron-exon | RAP1GAP2 | 17 | - | GVQW3 | 11 | - |
| exon-exon | RAP2C | X | + | RAP2C | X | - |
| intron-exon | RAPGEF1 | 9 | + | TALAM1 | 11 | - |
| exon-exon | RAPGEF1 | 9 | - | PPP1CB | 2 | + |
| exon-exon | RARA | 17 | + | SFTPB | 2 | + |
| exon-exon | RARRES1 | 3 | + | LOC100287290 | 3 | + |
| exon-exon | RARRES1 | 3 | + | LOC100287290 | 3 | + |
| exon-exon | RARRES1 | 3 | + | MFSD1 | 3 | + |
| exon-exon | RASA4B | 7 | - | PHC2 | 1 | - |
| exon-intron | RASA4DP | 7 | + | LRRC17 | 7 | + |
| intron-exon | RASAL1 | 12 | - | DTX1 | 12 | - |
| exon-exon | RASAL2 | 1 | - | RASAL2-AS1 | 1 | - |
| exon-exon | RASAL2 | 1 | - | RASAL2 | 1 | + |
| exon-exon | RASGEF1B | 4 | + | LOC107986215 | 4 | + |
| exon-intron | RASGRP1 | 15 | + | LOC105370774 | 15 | + |
| intron-exon | RASGRP3-AS1 | 2 | - | RASGRP3 | 2 | - |
| exon-exon | RASGRP4 | 19 | - | FAM98C | 19 | - |
| exon-exon | RASGRP4 | 19 | - | FAM98C | 19 | - |
| exon-exon | RASL12 | 15 | + | SLC51B | 15 | + |
| intron-exon | RASSF4 | 10 | + | BPGM | 7 | - |
| exon-intron | RASSF4 | 10 | + | VKORC1L1 | 7 | - |
| intron-exon | RASSF8 | 12 | - | RASSF8-AS1 | 12 | - |
| exon-exon | RAVER1 | 19 | + | RNA45SN2 | 21 | - |
| exon-exon | RBAK | 7 | + | RBAK-RBAKDN | 7 | + |
| exon-intron | RBBP4 | 1 | + | SYNC | 1 | + |
| exon-exon | RBBP6 | 16 | + | CEP350 | 1 | - |
| exon-exon | RBFA | 18 | + | RBFADN | 18 | + |
| exon-exon | RBFA | 18 | + | RBFADN | 18 | + |
| exon-intron | RBFA | 18 | + | RBFADN | 18 | + |
| exon-intron | RBFA | 18 | - | RBFA | 18 | + |
| intron-exon | RBFOX1 | 16 | + | ATP5IF1 | 1 | - |
| intron-exon | RBFOX2 | 22 | + | UBN2 | 7 | + |
| exon-intron | RBFOX2 | 22 | - | ZC3H14 | 14 | - |
| intron-exon | RBIS | 8 | - | E2F5 | 8 | - |
| intron-exon | RBKS | 2 | + | BABAM2 | 2 | + |
| intron-exon | RBL2 | 16 | - | PPP2R5A | 1 | + |
| exon-exon | RBM12B | 8 | - | CIBAR1 | 8 | - |
| exon-intron | RBM14 | 11 | + | RBM14-RBM4 | 11 | + |
| exon-intron | RBM14 | 11 | + | RBM4 | 11 | + |
| exon-exon | RBM14 | 11 | + | RBM4 | 11 | + |
| exon-exon | RBM14 | 11 | + | RBM4 | 11 | + |
| exon-exon | RBM14 | 11 | + | RBM4 | 11 | + |
| exon-exon | RBM14 | 11 | - | RBM14 | 11 | + |
| exon-exon | RBM14 | 11 | - | RBM14 | 11 | + |
| exon-intron | RBM14-RBM4 | 11 | + | RBM4 | 11 | + |
| intron-exon | RBM15 | 1 | + | MRTFA | 22 | - |
| exon-intron | RBM15B | 3 | + | UMAD1 | 7 | + |
| intron-exon | RBM27 | 5 | - | LARS1 | 5 | - |
| exon-exon | RBM38 | 20 | + | CTBP2 | 10 | - |
| intron-exon | RBM38-AS1 | 20 | + | RBM38 | 20 | + |
| intron-exon | RBM38-AS1 | 20 | + | RBM38 | 20 | + |
| exon-intron | RBM39 | 20 | - | FER1L4 | 20 | - |
| exon-intron | RBM4 | 11 | + | NFIA | 1 | + |
| exon-exon | RBM4 | 11 | - | RBM4 | 11 | + |
| exon-exon | RBM44 | 2 | - | LRRFIP1 | 2 | - |
| exon-intron | RBM44 | 2 | - | LRRFIP1 | 2 | - |
| exon-intron | RBM4B | 11 | - | RBM4 | 11 | - |
| exon-intron | RBM7 | 11 | + | AP002373.1 | 11 | + |
| exon-intron | RBM7 | 11 | + | AP002373.1 | 11 | + |
| exon-exon | RBM7 | 11 | - | C11orf71 | 11 | - |
| exon-intron | RBM8A | 1 | + | LIX1L-AS1 | 1 | + |
| exon-intron | RBM8A | 1 | + | LIX1L-AS1 | 1 | + |
| intron-exon | RBM8A | 1 | - | GNRHR2 | 1 | - |
| intron-exon | RBM8A | 1 | - | PEX11B | 1 | - |
| exon-intron | RBM8B | 14 | + | C14orf39 | 14 | + |
| intron-exon | RBMX | X | - | RAB28P5 | X | - |
| exon-intron | RBMX | X | - | FLJ40194 | 17 | - |
| exon-intron | RBMX | X | - | KDM4C | 9 | + |
| exon-intron | RBP4 | 10 | - | BPIFC | 22 | - |
| exon-exon | RBP5 | 12 | + | CLSTN3 | 12 | + |
| exon-exon | RBPJ | 4 | + | ZBTB16 | 11 | + |
| intron-exon | RBPJ | 4 | - | KIF5B | 10 | - |
| intron-exon | RBPMS | 8 | - | ND1 | MT | + |
| intron-exon | RCAN1 | 21 | + | LINC01426 | 21 | + |
| exon-exon | RCHY1 | 4 | + | YWHAG | 7 | - |
| exon-exon | RCN1 | 11 | + | TPT1-AS1 | 13 | - |
| exon-intron | RCN1 | 11 | + | TPT1-AS1 | 13 | - |
| exon-exon | RCN1 | 11 | + | TPT1-AS1 | 13 | - |
| exon-intron | RCN1 | 11 | + | TPT1-AS1 | 13 | - |
| exon-exon | RCN1P2 | 13 | - | TPT1-AS1 | 13 | - |
| exon-intron | RCN1P2 | 13 | - | TPT1-AS1 | 13 | - |
| exon-exon | RCN2 | 15 | - | RCN2 | 15 | + |
| exon-exon | RD3 | 1 | + | RD3 | 1 | - |
| intron-exon | RDH10-AS1 | 8 | - | RDH10 | 8 | - |
| exon-intron | RDH11 | 14 | - | SUCLG2 | 3 | - |
| exon-exon | RDH11 | 14 | - | VTI1B | 14 | - |
| exon-exon | RDH11 | 14 | - | IPO7 | 11 | + |
| exon-exon | RDM1P5 | 17 | + | PLXDC1 | 17 | + |
| exon-exon | RECQL | 12 | - | PYROXD1 | 12 | - |
| intron-exon | RECQL5 | 17 | + | SMIM6 | 17 | + |
| exon-intron | RECQL5 | 17 | + | LOC107985013 | 17 | + |
| exon-exon | RECQL5 | 17 | - | ARHGDIA | 17 | - |
| exon-intron | REG4 | 1 | - | MOSPD1 | X | + |
| intron-exon | RELL1 | 4 | - | C4orf19 | 4 | - |
| exon-exon | RELL1 | 4 | - | XIAP | X | + |
| exon-intron | REM1 | 20 | - | DEFB124 | 20 | - |
| exon-exon | REPIN1 | 7 | + | ZNF775 | 7 | + |
| exon-intron | REPS1 | 6 | + | REPS1 | 6 | - |
| exon-intron | REPS1 | 6 | - | MCM7 | 7 | - |
| exon-intron | REST | 4 | + | UFD1 | 22 | - |
| exon-exon | REST | 4 | + | CNOT1 | 16 | + |
| intron-exon | RETNLB | 3 | - | LOC105374034 | 3 | - |
| exon-exon | REV1 | 2 | - | EIF5 | 14 | + |
| exon-intron | REXO2 | 11 | - | SARM1 | 17 | - |
| exon-exon | REXO5 | 16 | - | ERI2 | 16 | - |
| exon-exon | REXO5 | 16 | - | ERI2 | 16 | - |
| exon-intron | REXO5 | 16 | - | ERI2 | 16 | - |
| exon-exon | REXO5 | 16 | - | ERI2 | 16 | - |
| exon-exon | REXO5 | 16 | - | ERI2 | 16 | - |
| exon-intron | REXO5 | 16 | - | ERI2 | 16 | - |
| intron-exon | RF00003 | 1 | - | ADCY2 | 5 | + |
| intron-exon | RFNG | 17 | + | GPS1 | 17 | + |
| exon-exon | RFNG | 17 | + | GPS1 | 17 | + |
| exon-intron | RFT1 | 3 | - | SFMBT1 | 3 | - |
| exon-exon | RFT1 | 3 | - | SFMBT1 | 3 | - |
| exon-exon | RFT1 | 3 | - | SFMBT1 | 3 | - |
| exon-intron | RFT1 | 3 | - | SFMBT1 | 3 | - |
| exon-intron | RFT1 | 3 | - | SFMBT1 | 3 | - |
| exon-intron | RFX1 | 19 | - | CASC2 | 10 | + |
| intron-exon | RFX5-AS1 | 1 | - | RFX5 | 1 | - |
| intron-exon | RFX5-AS1 | 1 | - | RFX5 | 1 | - |
| intron-exon | RFX5-AS1 | 1 | - | RFX5 | 1 | - |
| intron-exon | RFX5-AS1 | 1 | - | RFX5 | 1 | - |
| intron-exon | RFX5-AS1 | 1 | - | RFX5 | 1 | - |
| intron-exon | RFX5-AS1 | 1 | - | RFX5 | 1 | - |
| exon-exon | RFXANK | 19 | - | BORCS8-MEF2B | 19 | - |
| exon-exon | RFXANK | 19 | - | BORCS8-MEF2B | 19 | - |
| exon-exon | RGL2 | 6 | + | TAPBP | 6 | + |
| exon-exon | RGP1 | 9 | - | GBA2 | 9 | - |
| intron-exon | RGP1 | 9 | - | GBA2 | 9 | - |
| intron-exon | RGP1 | 9 | - | GBA2 | 9 | - |
| intron-exon | RGP1 | 9 | - | GBA2 | 9 | - |
| intron-exon | RGP1 | 9 | - | GBA2 | 9 | - |
| intron-exon | RGP1 | 9 | - | GBA2 | 9 | - |
| intron-exon | RGP1 | 9 | - | GBA2 | 9 | - |
| intron-exon | RGP1 | 9 | - | GBA2 | 9 | - |
| intron-exon | RGP1 | 9 | - | GBA2 | 9 | - |
| intron-exon | RGP1 | 9 | - | GBA2 | 9 | - |
| intron-exon | RGPD2 | 2 | - | RGPD1 | 2 | - |
| intron-exon | RGPD3 | 2 | - | PLGLA | 2 | - |
| exon-exon | RGS5 | 1 | + | RGS5 | 1 | - |
| exon-intron | RGS5 | 1 | + | RGS5-AS1 | 1 | + |
| exon-intron | RGS5 | 1 | + | RGS5-AS1 | 1 | + |
| exon-intron | RGS5 | 1 | + | RGS5-AS1 | 1 | + |
| exon-intron | RGS5 | 1 | + | RGS5-AS1 | 1 | + |
| intron-exon | RGS5 | 1 | + | NUF2 | 1 | + |
| exon-intron | RGS5 | 1 | - | ACBD3 | 1 | - |
| intron-exon | RGS6 | 14 | - | FN1 | 2 | - |
| exon-exon | RHCE | 1 | - | TMEM50A | 1 | - |
| exon-exon | RHCE | 1 | - | TMEM50A | 1 | - |
| exon-exon | RHCE | 1 | - | TMEM50A | 1 | - |
| exon-exon | RHCE | 1 | - | TMEM50A | 1 | - |
| exon-exon | RHCE | 1 | - | TMEM50A | 1 | - |
| exon-exon | RHCE | 1 | - | TMEM50A | 1 | - |
| exon-exon | RHCE | 1 | - | TMEM50A | 1 | + |
| exon-intron | RHEBL1 | 12 | - | WDR7 | 18 | + |
| exon-exon | RHNO1 | 12 | + | TULP3 | 12 | + |
| intron-exon | RHOBTB2 | 8 | + | TNFRSF10A | 8 | + |
| exon-exon | RHOC | 1 | + | PPM1J | 1 | + |
| exon-exon | RHOC | 1 | + | PPM1J | 1 | + |
| exon-intron | RHOQ | 2 | + | LRR1 | 14 | + |
| intron-exon | RHPN2 | 19 | + | PPP1R12C | 19 | - |
| exon-exon | RICTOR | 5 | - | OSMR | 5 | - |
| intron-exon | RIF1 | 2 | + | TMEM108 | 3 | - |
| intron-exon | RIF1 | 2 | - | TRAPPC8 | 18 | - |
| exon-intron | RIIAD1 | 1 | - | CELF3 | 1 | - |
| intron-exon | RIMS3 | 1 | + | NFYC | 1 | + |
| exon-exon | RINT1 | 7 | + | FBXO3 | 11 | - |
| exon-exon | RINT1 | 7 | + | FBXO3 | 11 | - |
| exon-intron | RIOK1 | 6 | - | IQCJ-SCHIP1 | 3 | - |
| exon-intron | RIOK1 | 6 | - | IQCJ-SCHIP1 | 3 | - |
| exon-exon | RIOK3 | 18 | + | RIOK3 | 18 | - |
| intron-exon | RIPK4 | 21 | + | NEB | 2 | + |
| intron-exon | RIPOR2 | 6 | + | PPIAP29 | 6 | + |
| exon-exon | RIPPLY2 | 6 | + | CYB5R4 | 6 | + |
| exon-intron | RIPPLY3 | 21 | - | CSNK1G1 | 15 | + |
| exon-exon | RLBP1 | 15 | + | RLBP1 | 15 | - |
| exon-exon | RLF | 1 | + | MYCL | 1 | - |
| exon-exon | RLIM | X | + | RLIM | X | - |
| exon-exon | RLIM | X | + | RLIM | X | - |
| exon-intron | RLIM | X | - | DMP1 | 4 | + |
| exon-intron | RLN1 | 9 | - | RLN2 | 9 | - |
| exon-intron | RLN1 | 9 | - | RLN2 | 9 | - |
| exon-intron | RLN1 | 9 | - | RLN2 | 9 | - |
| exon-intron | RLN1 | 9 | - | RLN2 | 9 | - |
| exon-intron | RLN1 | 9 | - | RLN2 | 9 | - |
| exon-exon | RLN1 | 9 | - | RLN2 | 9 | - |
| exon-intron | RLN1 | 9 | - | RLN2 | 9 | - |
| exon-intron | RLN1 | 9 | - | RLN2 | 9 | - |
| exon-exon | RMDN1 | 8 | - | WWP1 | 8 | - |
| intron-exon | RMDN1 | 8 | - | WWP1 | 8 | - |
| exon-exon | RN7SK | 6 | + | MYH11 | 16 | - |
| exon-exon | RN7SK | 6 | + | IRF6 | 1 | - |
| exon-intron | RN7SL357P | 4 | - | PPAT | 4 | - |
| intron-exon | RNA18SP5 | 21 | + | LHFPL2 | 5 | + |
| intron-exon | RNA18SP5 | 21 | + | ALB | 4 | + |
| intron-exon | RNA18SP5 | 21 | + | RNA45SN3 | 21 | - |
| intron-exon | RNA18SP5 | 21 | + | RHBDF1 | 16 | - |
| intron-exon | RNA18SP5 | 21 | - | RNA45SN3 | 21 | + |
| intron-exon | RNA18SP5 | 21 | - | RPS24 | 10 | + |
| intron-exon | RNA18SP5 | 21 | - | RPTOR | 17 | + |
| intron-exon | RNA18SP5 | 21 | - | RNA45SN3 | 21 | + |
| intron-exon | RNA18SP5 | 21 | - | RNA45SN2 | 21 | - |
| exon-exon | RNA28SN1 | 21 | - | RNA45SN2 | 21 | - |
| intron-exon | RNA28SP | 21 | + | AKAP10 | 17 | - |
| intron-exon | RNA28SP | 21 | + | RNA45SN3 | 21 | + |
| intron-exon | RNA28SP | 21 | + | NPTX1 | 17 | - |
| intron-exon | RNA28SP | 21 | + | GSK3A | 19 | - |
| intron-exon | RNA28SP | 21 | - | ND2 | MT | + |
| intron-exon | RNA28SP | 21 | - | RNA45SN2 | 21 | - |
| intron-exon | RNA28SP | 21 | - | RNA45SN2 | 21 | - |
| intron-exon | RNA28SP | 21 | - | RNA45SN3 | 21 | + |
| exon-exon | RNA45SN1 | 21 | + | KLF2 | 19 | + |
| exon-exon | RNA45SN1 | 21 | + | SLC25A5 | X | + |
| exon-exon | RNA45SN1 | 21 | + | LTBR | 12 | + |
| exon-exon | RNA45SN1 | 21 | + | GPR34 | X | + |
| exon-exon | RNA45SN1 | 21 | + | FTH1 | 11 | - |
| exon-exon | RNA45SN1 | 21 | + | VAMP1 | 12 | - |
| exon-exon | RNA45SN1 | 21 | + | VIM | 10 | + |
| exon-exon | RNA45SN1 | 21 | + | GALNT7 | 4 | + |
| exon-exon | RNA45SN1 | 21 | + | GSK3A | 19 | - |
| exon-exon | RNA45SN1 | 21 | + | LIN7B | 19 | + |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN1 | 21 | - |
| exon-intron | RNA45SN1 | 21 | + | IGF1R | 15 | + |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | RNA45SN1 | 21 | + | KDM6A | X | + |
| exon-intron | RNA45SN1 | 21 | + | LOC112268284 | 21 | - |
| exon-intron | RNA45SN1 | 21 | + | LOC112268284 | 21 | - |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN2 | 21 | - |
| exon-intron | RNA45SN1 | 21 | + | GCNT1 | 9 | - |
| exon-intron | RNA45SN1 | 21 | + | LOC112268284 | 21 | - |
| exon-intron | RNA45SN1 | 21 | + | LOC112268284 | 21 | - |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN1 | 21 | + | RNA45SN2 | 21 | - |
| exon-intron | RNA45SN1 | 21 | - | IGH | 14 | + |
| exon-intron | RNA45SN1 | 21 | - | SYT1 | 12 | - |
| exon-exon | RNA45SN1 | 21 | - | LOC107987206 | 14 | + |
| exon-exon | RNA45SN1 | 21 | - | PLCB3 | 11 | + |
| exon-exon | RNA45SN1 | 21 | - | RNA45SN1 | 21 | + |
| exon-exon | RNA45SN1 | 21 | - | KRT7 | 12 | - |
| exon-exon | RNA45SN1 | 21 | - | RNA45SN3 | 21 | + |
| exon-exon | RNA45SN1 | 21 | - | RNA45SN3 | 21 | + |
| exon-exon | RNA45SN1 | 21 | - | SERPINE2 | 2 | + |
| exon-exon | RNA45SN2 | 21 | + | GH1 | 17 | - |
| exon-exon | RNA45SN2 | 21 | + | COX2 | MT | + |
| exon-exon | RNA45SN2 | 21 | + | RBM25 | 14 | + |
| exon-exon | RNA45SN2 | 21 | + | RHBDF1 | 16 | - |
| exon-intron | RNA45SN2 | 21 | + | RNA18SP5 | 21 | + |
| exon-intron | RNA45SN2 | 21 | + | NEDD8-MDP1 | 14 | - |
| exon-intron | RNA45SN2 | 21 | + | NEDD8-MDP1 | 14 | - |
| exon-exon | RNA45SN2 | 21 | + | TMSB4XP8 | 4 | - |
| exon-exon | RNA45SN2 | 21 | + | FTL | 19 | + |
| exon-exon | RNA45SN2 | 21 | + | UNC5CL | 6 | - |
| exon-exon | RNA45SN2 | 21 | + | LAPTM4B | 8 | + |
| exon-exon | RNA45SN2 | 21 | + | GFOD2 | 16 | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN3 | 21 | + |
| exon-exon | RNA45SN2 | 21 | + | ZFP36L2 | 2 | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN3 | 21 | + |
| exon-intron | RNA45SN2 | 21 | + | LOC112268284 | 21 | - |
| exon-intron | RNA45SN2 | 21 | + | LOC112268284 | 21 | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN2 | 21 | - |
| exon-intron | RNA45SN2 | 21 | + | RNA28SP | 21 | + |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN2 | 21 | - |
| exon-intron | RNA45SN2 | 21 | + | RNA28SP | 21 | + |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN1 | 21 | - |
| exon-intron | RNA45SN2 | 21 | + | LOC112268284 | 21 | - |
| exon-intron | RNA45SN2 | 21 | + | LOC112268284 | 21 | - |
| exon-intron | RNA45SN2 | 21 | + | LOC112268284 | 21 | - |
| exon-intron | RNA45SN2 | 21 | + | LOC112268284 | 21 | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN2 | 21 | + | BACE2 | 21 | + |
| exon-intron | RNA45SN2 | 21 | + | LOC112268284 | 21 | - |
| exon-intron | RNA45SN2 | 21 | + | LOC105370062 | 12 | + |
| exon-intron | RNA45SN2 | 21 | + | LOC112268284 | 21 | - |
| exon-intron | RNA45SN2 | 21 | + | LOC112268284 | 21 | - |
| exon-intron | RNA45SN2 | 21 | + | LOC112268284 | 21 | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN2 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN2 | 21 | - | RNA45SN2 | 21 | + |
| exon-intron | RNA45SN2 | 21 | - | SLC35B3 | 6 | + |
| exon-intron | RNA45SN2 | 21 | - | LOC101927178 | 14 | + |
| exon-intron | RNA45SN2 | 21 | - | PRMT7 | 16 | + |
| exon-intron | RNA45SN2 | 21 | - | ELF2 | 4 | - |
| exon-intron | RNA45SN2 | 21 | - | BACH2 | 6 | - |
| exon-intron | RNA45SN2 | 21 | - | LOC100130331 | 1 | + |
| exon-intron | RNA45SN2 | 21 | - | RNA28SP | 21 | - |
| exon-exon | RNA45SN2 | 21 | - | LOC107987206 | 14 | + |
| exon-exon | RNA45SN2 | 21 | - | IGHG1 | 14 | - |
| exon-exon | RNA45SN2 | 21 | - | RNA45SN2 | 21 | + |
| exon-exon | RNA45SN2 | 21 | - | NISCH | 3 | + |
| exon-exon | RNA45SN2 | 21 | - | RNA45SN2 | 21 | + |
| exon-exon | RNA45SN2 | 21 | - | FBXO42 | 1 | + |
| exon-exon | RNA45SN2 | 21 | - | RNF216 | 7 | + |
| exon-exon | RNA45SN2 | 21 | - | VEGFA | 6 | - |
| exon-exon | RNA45SN3 | 21 | + | WDTC1 | 1 | + |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN3 | 21 | - |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN3 | 21 | + | RHBDF1 | 16 | - |
| exon-exon | RNA45SN3 | 21 | + | NEDD8-MDP1 | 14 | - |
| exon-exon | RNA45SN3 | 21 | + | HSP90AB1 | 6 | + |
| exon-exon | RNA45SN3 | 21 | + | UNC5CL | 6 | - |
| exon-exon | RNA45SN3 | 21 | + | TERF2IP | 16 | + |
| exon-exon | RNA45SN3 | 21 | + | EEF1A2 | 20 | - |
| exon-intron | RNA45SN3 | 21 | + | RNA28SP | 21 | + |
| exon-exon | RNA45SN3 | 21 | + | MEF2C | 5 | - |
| exon-exon | RNA45SN3 | 21 | + | POLR2A | 17 | + |
| exon-intron | RNA45SN3 | 21 | + | RNA45SN2 | 21 | + |
| exon-intron | RNA45SN3 | 21 | + | WDR88 | 19 | + |
| exon-intron | RNA45SN3 | 21 | + | LOC112268284 | 21 | - |
| exon-exon | RNA45SN3 | 21 | + | PTPRS | 19 | + |
| exon-exon | RNA45SN3 | 21 | + | XIST | X | - |
| exon-intron | RNA45SN3 | 21 | + | LOC105371574 | 17 | - |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN1 | 21 | + |
| exon-intron | RNA45SN3 | 21 | + | LOC112268284 | 21 | - |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN3 | 21 | + | GTF2IP4 | 7 | + |
| exon-intron | RNA45SN3 | 21 | + | RNA28SP | 21 | + |
| exon-intron | RNA45SN3 | 21 | + | LOC112268284 | 21 | - |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN1 | 21 | - |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN3 | 21 | + | RNA45SN2 | 21 | - |
| exon-exon | RNA45SN3 | 21 | - | PLCB3 | 11 | + |
| exon-exon | RNA45SN3 | 21 | - | RNA45SN1 | 21 | + |
| exon-exon | RNA45SN3 | 21 | - | RNA45SN2 | 21 | + |
| exon-exon | RNA45SN3 | 21 | - | RNA45SN2 | 21 | - |
| exon-intron | RNA45SN3 | 21 | - | EFCAB11 | 14 | + |
| exon-intron | RNA45SN3 | 21 | - | LRCH1 | 13 | + |
| exon-intron | RNA45SN3 | 21 | - | MTND2P28 | 1 | + |
| exon-exon | RNA45SN3 | 21 | - | SLC6A7 | 5 | - |
| exon-exon | RNA45SN3 | 21 | - | RNA45SN2 | 21 | - |
| intron-exon | RNA5-8SP10 | 21 | + | EEF1A1 | 6 | - |
| exon-intron | RNASE1 | 14 | - | PPM1E | 17 | + |
| exon-exon | RNASE11 | 14 | - | RNASE12 | 14 | - |
| exon-exon | RNASE4 | 14 | - | ACTG1 | 17 | - |
| exon-exon | RNASEH2C | 11 | - | KAT5 | 11 | - |
| exon-exon | RNASEH2C | 11 | - | KAT5 | 11 | - |
| exon-exon | RNASEH2C | 11 | - | KAT5 | 11 | - |
| exon-exon | RNASEH2C | 11 | - | KAT5 | 11 | - |
| exon-exon | RNASEH2C | 11 | - | KAT5 | 11 | - |
| exon-exon | RNASEH2C | 11 | - | KAT5 | 11 | - |
| exon-exon | RNASEH2C | 11 | - | KAT5 | 11 | - |
| exon-exon | RNASEH2C | 11 | - | KAT5 | 11 | - |
| exon-exon | RNASEH2C | 11 | - | KAT5 | 11 | - |
| exon-exon | RNASEK-C17orf49 | 17 | - | IKBKE | 1 | - |
| exon-intron | RNASET2 | 6 | + | Z94721.3 | 6 | + |
| exon-intron | RNF103 | 2 | - | CHMP3 | 2 | - |
| exon-exon | RNF103 | 2 | - | CHMP3 | 2 | - |
| exon-exon | RNF103-CHMP3 | 2 | - | RNF103-CHMP3 | 2 | - |
| exon-exon | RNF103-CHMP3 | 2 | - | RNF103-CHMP3 | 2 | - |
| exon-exon | RNF103-CHMP3 | 2 | - | RNF103-CHMP3 | 2 | - |
| exon-exon | RNF103-CHMP3 | 2 | - | RNF103-CHMP3 | 2 | - |
| exon-exon | RNF103-CHMP3 | 2 | - | RNF103-CHMP3 | 2 | - |
| exon-exon | RNF103-CHMP3 | 2 | - | RNF103-CHMP3 | 2 | - |
| exon-exon | RNF103-CHMP3 | 2 | - | RNF103-CHMP3 | 2 | - |
| exon-exon | RNF103-CHMP3 | 2 | - | RNF103-CHMP3 | 2 | - |
| exon-exon | RNF103-CHMP3 | 2 | - | RNF103-CHMP3 | 2 | - |
| exon-exon | RNF103-CHMP3 | 2 | - | RNF103-CHMP3 | 2 | - |
| exon-exon | RNF103-CHMP3 | 2 | - | RNF103-CHMP3 | 2 | - |
| exon-exon | RNF103-CHMP3 | 2 | - | RNF103-CHMP3 | 2 | - |
| exon-exon | RNF103-CHMP3 | 2 | - | RNF103-CHMP3 | 2 | - |
| exon-exon | RNF103-CHMP3 | 2 | - | RNF103-CHMP3 | 2 | - |
| exon-exon | RNF103-CHMP3 | 2 | - | RNF103-CHMP3 | 2 | - |
| exon-exon | RNF103-CHMP3 | 2 | - | RNF103-CHMP3 | 2 | - |
| exon-exon | RNF103-CHMP3 | 2 | - | RNF103-CHMP3 | 2 | - |
| exon-exon | RNF103-CHMP3 | 2 | - | RNF103-CHMP3 | 2 | - |
| exon-exon | RNF103-CHMP3 | 2 | - | RNF103-CHMP3 | 2 | - |
| exon-exon | RNF103-CHMP3 | 2 | - | RNF103-CHMP3 | 2 | - |
| exon-exon | RNF103-CHMP3 | 2 | - | RNF103-CHMP3 | 2 | - |
| exon-exon | RNF103-CHMP3 | 2 | - | RNF103-CHMP3 | 2 | - |
| exon-exon | RNF103-CHMP3 | 2 | - | RNF103-CHMP3 | 2 | - |
| exon-exon | RNF103-CHMP3 | 2 | - | RNF103-CHMP3 | 2 | - |
| exon-exon | RNF103-CHMP3 | 2 | - | RNF103-CHMP3 | 2 | - |
| exon-exon | RNF103-CHMP3 | 2 | - | RNF103-CHMP3 | 2 | - |
| exon-exon | RNF103-CHMP3 | 2 | - | RNF103-CHMP3 | 2 | - |
| exon-intron | RNF11 | 1 | + | CSF2RA | Y | - |
| exon-intron | RNF115 | 1 | + | NOTCH2NLA | 1 | + |
| intron-exon | RNF13 | 3 | - | ANKUB1 | 3 | - |
| intron-exon | RNF139 | 8 | + | TATDN1 | 8 | + |
| exon-exon | RNF14 | 5 | - | PCDH12 | 5 | - |
| exon-exon | RNF185 | 22 | + | CFC1 | 2 | - |
| exon-exon | RNF185 | 22 | + | LIMK2 | 22 | + |
| exon-intron | RNF187 | 1 | + | PLCB4 | 20 | + |
| intron-exon | RNF213-AS1 | 17 | - | TPP1 | 11 | + |
| intron-exon | RNF216 | 7 | - | FBXL18 | 7 | - |
| exon-exon | RNF217 | 6 | + | MRPS27 | 5 | - |
| exon-exon | RNF217 | 6 | - | RNF217-AS1 | 6 | - |
| intron-exon | RNF31 | 14 | - | PSME2 | 14 | - |
| exon-exon | RNF32-AS1 | 7 | - | RNF32 | 7 | - |
| exon-exon | RNF32-AS1 | 7 | - | RNF32 | 7 | - |
| exon-exon | RNF32-AS1 | 7 | - | RNF32 | 7 | - |
| exon-exon | RNF32-AS1 | 7 | - | RNF32 | 7 | - |
| exon-intron | RNF32-AS1 | 7 | - | RNF32 | 7 | - |
| exon-exon | RNF39 | 6 | - | PPP1R11 | 6 | - |
| intron-exon | RNF39 | 6 | - | PPP1R11 | 6 | - |
| exon-intron | RNF43 | 17 | + | RNF43 | 17 | - |
| exon-exon | RNF43 | 17 | - | SUPT4H1 | 17 | - |
| exon-exon | RNF5 | 6 | + | AGER | 6 | + |
| exon-exon | RNFT1 | 17 | + | TBC1D3P1-DHX40P1 | 17 | + |
| exon-exon | RNFT1 | 17 | + | TBC1D3P1-DHX40P1 | 17 | + |
| exon-exon | RNGTT | 6 | - | OR7E47P | 12 | + |
| exon-exon | RNGTT | 6 | - | OR7E47P | 12 | + |
| exon-exon | RNMT | 18 | - | FAM210A | 18 | - |
| exon-exon | RNPC3 | 1 | + | AMY2B | 1 | + |
| exon-exon | RNPC3 | 1 | + | AMY2B | 1 | + |
| exon-exon | RNPC3 | 1 | + | AMY2B | 1 | + |
| intron-exon | RNPEPL1 | 2 | - | ANKMY1 | 2 | - |
| exon-intron | RNPS1 | 16 | - | LINC01654 | 1 | + |
| intron-exon | RNR1 | MT | + | TMSB10 | 2 | + |
| intron-exon | RNR2 | MT | + | NFKBIA | 14 | - |
| intron-exon | RNR2 | MT | + | UMOD | 16 | - |
| intron-exon | RNR2 | MT | - | ZNF483 | 9 | - |
| intron-exon | RNR2 | MT | - | COPA | 1 | - |
| exon-exon | RNU1-1 | 1 | - | ACTB | 7 | - |
| exon-exon | RNU1-1 | 1 | - | H3-3B | 17 | - |
| exon-exon | RNU1-4 | 1 | + | FOS | 14 | + |
| exon-exon | RNU1-4 | 1 | + | CAV1 | 7 | + |
| exon-exon | RNU6-2 | 19 | + | NGLY1 | 3 | - |
| exon-exon | RNVU1-18 | 1 | - | FOS | 14 | + |
| intron-exon | RNVU1-27 | 1 | + | LOC105373467 | 1 | + |
| exon-exon | RNVU1-7 | 1 | - | TP53TG5 | 20 | - |
| exon-exon | RNVU1-7 | 1 | - | PSG1 | 19 | - |
| exon-intron | RNVU1-8 | 1 | - | NLGN1 | 3 | - |
| exon-exon | ROBO2 | 3 | + | VPS8 | 3 | + |
| exon-exon | ROMO1 | 20 | - | NFS1 | 20 | - |
| intron-exon | RORB | 9 | - | TSPAN1 | 1 | - |
| intron-exon | RORB | 9 | - | TSPAN1 | 1 | - |
| intron-exon | RP11-114G22.1 | 12 | - | LOC107984516 | 12 | - |
| intron-exon | RP11-170M17.1 | 10 | - | EIF2S3 | X | + |
| intron-exon | RP11-289H16.1 | 1 | + | LOC100996737 | 1 | + |
| intron-exon | RP11-544M22.13 | 1 | - | F11R | 1 | - |
| intron-exon | RP11-544M22.13 | 1 | - | F11R | 1 | - |
| intron-exon | RP11-626H12.2 | 11 | + | ZNF207 | 17 | + |
| intron-exon | RP11-649A16.1 | 3 | - | LOC112268449 | 3 | - |
| intron-exon | RP11-72M17.1 | 14 | + | LOC107987206 | 14 | + |
| intron-exon | RP11-807H22.7 | 11 | - | ZNF596 | 8 | - |
| intron-exon | RP11-80H5.9 | 10 | - | NBAS | 2 | - |
| intron-exon | RP11-81K13.1 | 12 | + | KCNC2 | 12 | + |
| intron-exon | RP3-468K18.5 | 6 | - | PHACTR2 | 6 | - |
| exon-intron | RPA3 | 7 | + | UMAD1 | 7 | + |
| exon-exon | RPA3 | 7 | + | UMAD1 | 7 | + |
| exon-exon | RPA3 | 7 | + | UMAD1 | 7 | + |
| exon-exon | RPA3 | 7 | + | UMAD1 | 7 | + |
| exon-intron | RPA3 | 7 | + | UMAD1 | 7 | + |
| exon-intron | RPA3 | 7 | - | CUX2 | 12 | + |
| exon-exon | RPAIN | 17 | + | C1QBP | 17 | + |
| exon-exon | RPAIN | 17 | + | C1QBP | 17 | + |
| intron-exon | RPAIN | 17 | + | C1QBP | 17 | + |
| exon-intron | RPAP2 | 1 | + | EVI5 | 1 | + |
| intron-exon | RPF1 | 1 | + | GNG5 | 1 | + |
| intron-exon | RPH3AL | 17 | + | LOC100506388 | 17 | + |
| exon-intron | RPL10 | X | + | DLGAP1 | 18 | + |
| exon-exon | RPL10A | 6 | + | PPP2R5E | 14 | + |
| exon-intron | RPL10AP6 | 3 | - | PTPRG | 3 | - |
| exon-intron | RPL10AP6 | 3 | - | FDX1 | 11 | + |
| exon-intron | RPL10AP6 | 3 | - | PTPRG | 3 | - |
| exon-intron | RPL10P16 | 19 | - | AL008719.1 | 22 | - |
| exon-exon | RPL11 | 1 | + | ELOA | 1 | + |
| exon-exon | RPL12 | 9 | + | NBEAL1 | 2 | + |
| exon-exon | RPL13 | 16 | + | RPL13P12 | 17 | - |
| exon-exon | RPL13 | 16 | - | RPL13P12 | 17 | + |
| exon-exon | RPL13 | 16 | - | RPL13P12 | 17 | + |
| exon-exon | RPL13 | 16 | - | RPL13P12 | 17 | + |
| exon-exon | RPL13 | 16 | - | RPL13P12 | 17 | + |
| exon-exon | RPL13A | 19 | + | ARL6IP5 | 3 | + |
| exon-intron | RPL13A | 19 | + | ARID2 | 12 | + |
| exon-exon | RPL13A | 19 | - | RPL13AP5 | 10 | - |
| exon-exon | RPL13A | 19 | - | RPL13AP5 | 10 | - |
| exon-exon | RPL13A | 19 | - | RPL13AP25 | 13 | + |
| exon-exon | RPL13AP5 | 10 | - | PLOD2 | 3 | + |
| exon-exon | RPL13AP5 | 10 | - | ANKRD52 | 12 | + |
| exon-intron | RPL14 | 3 | + | TSHZ2 | 20 | + |
| exon-intron | RPL14 | 3 | + | FMNL2 | 2 | - |
| exon-exon | RPL14 | 3 | - | RPL14P1 | 12 | - |
| exon-intron | RPL14P1 | 12 | + | PLEC | 8 | - |
| exon-exon | RPL15 | 3 | + | RPL15P3 | 6 | + |
| exon-intron | RPL15 | 3 | + | MYO1H | 12 | + |
| exon-intron | RPL15 | 3 | + | RABGAP1L | 1 | - |
| exon-intron | RPL15 | 3 | + | PRKCD | 3 | + |
| exon-exon | RPL15 | 3 | - | NKIRAS1 | 3 | - |
| exon-exon | RPL15 | 3 | - | NKIRAS1 | 3 | - |
| exon-exon | RPL15 | 3 | - | NKIRAS1 | 3 | - |
| exon-intron | RPL15 | 3 | - | PCCA | 13 | + |
| exon-intron | RPL15 | 3 | - | CORIN | 4 | - |
| exon-intron | RPL15 | 3 | - | CORIN | 4 | - |
| exon-intron | RPL17 | 18 | - | DOCK6 | 19 | + |
| exon-exon | RPL17 | 18 | - | C18orf32 | 18 | - |
| exon-exon | RPL17 | 18 | - | C18orf32 | 18 | - |
| exon-exon | RPL17-C18orf32 | 18 | + | RPL17 | 18 | + |
| intron-exon | RPL17-C18orf32 | 18 | - | CTPS1 | 1 | + |
| exon-exon | RPL17-C18orf32 | 18 | - | RPL17-C18orf32 | 18 | - |
| exon-exon | RPL17-C18orf32 | 18 | - | RPL17-C18orf32 | 18 | - |
| exon-exon | RPL18 | 19 | + | RNA45SN1 | 21 | - |
| exon-intron | RPL18 | 19 | - | NLGN4Y | Y | + |
| exon-intron | RPL19 | 17 | + | FAM153CP | 5 | + |
| exon-intron | RPL19 | 17 | + | ERVMER34-1 | 4 | - |
| exon-intron | RPL19 | 17 | - | RPL28 | 19 | + |
| exon-exon | RPL19P4 | 2 | - | DTD1 | 20 | - |
| exon-intron | RPL21 | 13 | + | PALM2AKAP2 | 9 | - |
| exon-intron | RPL21P11 | 14 | - | BCR | 22 | + |
| exon-exon | RPL21P16 | 10 | + | KTN1 | 14 | - |
| exon-intron | RPL21P16 | 10 | - | INPP5F | 10 | - |
| exon-exon | RPL21P16 | 10 | - | B2M | 15 | + |
| exon-intron | RPL21P28 | 1 | - | DTL | 1 | - |
| exon-intron | RPL21P28 | 1 | - | DTL | 1 | - |
| exon-intron | RPL21P28 | 1 | - | DTL | 1 | - |
| exon-exon | RPL21P75 | 7 | + | B2M | 15 | + |
| exon-intron | RPL22 | 1 | - | PPP3CA | 4 | - |
| exon-exon | RPL23 | 17 | + | CENPF | 1 | - |
| exon-exon | RPL23 | 17 | - | DFFA | 1 | - |
| exon-intron | RPL23A | 17 | + | TLCD1 | 17 | + |
| exon-intron | RPL23AP41 | 3 | + | AL157700.1 | X | - |
| exon-intron | RPL23AP42 | 3 | - | LINC02067 | 3 | - |
| exon-intron | RPL23AP42 | 3 | - | LINC02067 | 3 | - |
| exon-intron | RPL23AP53 | 8 | - | LOC101927506 | 8 | - |
| exon-exon | RPL23AP61 | 10 | - | MSMB | 10 | - |
| exon-exon | RPL24 | 3 | + | SLC36A2 | 5 | + |
| exon-intron | RPL24 | 3 | + | CNPY3-GNMT | 6 | + |
| exon-exon | RPL24 | 3 | - | ZBTB11-AS1 | 3 | - |
| exon-exon | RPL24 | 3 | - | ZBTB11-AS1 | 3 | - |
| exon-exon | RPL24 | 3 | - | ZBTB11-AS1 | 3 | - |
| exon-exon | RPL24 | 3 | - | ZBTB11-AS1 | 3 | - |
| intron-exon | RPL26 | 17 | - | KRBA2 | 17 | - |
| exon-intron | RPL26L1 | 5 | - | CD81-AS1 | 11 | + |
| exon-exon | RPL27 | 17 | + | ND2 | MT | - |
| exon-intron | RPL27A | 11 | + | RPL27AP6 | 6 | - |
| exon-exon | RPL27A | 11 | - | TRIM66 | 11 | - |
| exon-intron | RPL27AP6 | 6 | + | TRIM66 | 11 | - |
| exon-exon | RPL27AP6 | 6 | + | TRIM66 | 11 | - |
| exon-intron | RPL28 | 19 | + | AHCYL2 | 7 | - |
| exon-intron | RPL28 | 19 | + | FBXO42 | 1 | - |
| exon-intron | RPL28 | 19 | + | TECPR2 | 14 | + |
| exon-intron | RPL29 | 3 | - | CANX | 5 | - |
| exon-exon | RPL3 | 22 | + | RPL3 | 22 | - |
| exon-exon | RPL3 | 22 | + | RPL3 | 22 | - |
| exon-exon | RPL3 | 22 | - | RPL3P4 | 14 | - |
| exon-intron | RPL3 | 22 | - | RPL3P4 | 14 | - |
| exon-exon | RPL3 | 22 | - | RPL3P4 | 14 | - |
| exon-exon | RPL3 | 22 | - | RPL3P4 | 14 | - |
| exon-exon | RPL3 | 22 | - | RPL3P4 | 14 | - |
| exon-exon | RPL3 | 22 | - | RPL3P4 | 14 | - |
| exon-exon | RPL3 | 22 | - | RPL3P4 | 14 | - |
| exon-exon | RPL3 | 22 | - | RPL3P4 | 14 | - |
| exon-exon | RPL3 | 22 | - | RPL3P4 | 14 | - |
| exon-exon | RPL3 | 22 | - | RPL3P4 | 14 | - |
| exon-exon | RPL3 | 22 | - | RPL3P4 | 14 | - |
| exon-exon | RPL3 | 22 | - | RPL3P4 | 14 | - |
| exon-exon | RPL3 | 22 | - | RPL3P4 | 14 | - |
| exon-exon | RPL3 | 22 | - | RPL3P4 | 14 | - |
| exon-exon | RPL30 | 8 | + | RPL30 | 8 | - |
| exon-intron | RPL30 | 8 | - | LARGE1 | 22 | - |
| exon-intron | RPL30 | 8 | - | MATN2 | 8 | - |
| exon-intron | RPL31 | 2 | + | LOC107984736 | 15 | - |
| exon-intron | RPL31 | 2 | + | ITPA | 20 | + |
| intron-exon | RPL31P4 | 14 | + | ATP8 | MT | + |
| exon-exon | RPL32 | 3 | - | CAND2 | 3 | - |
| exon-intron | RPL32 | 3 | - | LINC02681 | 10 | - |
| exon-intron | RPL32 | 3 | - | ZFAND3 | 6 | - |
| exon-intron | RPL34 | 4 | + | APP | 21 | + |
| exon-exon | RPL34 | 4 | + | MINAR2 | 5 | + |
| exon-exon | RPL35 | 9 | - | RPL35P2 | 6 | - |
| exon-intron | RPL35A | 3 | + | C2CD3 | 11 | + |
| exon-intron | RPL35A | 3 | + | KMT2E | 7 | - |
| exon-intron | RPL35A | 3 | + | SLC25A17 | 22 | + |
| exon-intron | RPL36 | 19 | + | LONP1 | 19 | + |
| exon-exon | RPL36A | X | + | RPL36A-HNRNPH2 | X | + |
| exon-exon | RPL36A | X | + | HNRNPH2 | X | + |
| exon-exon | RPL36A | X | + | HNRNPH2 | X | + |
| intron-exon | RPL36A-HNRNPH2 | X | + | HNRNPH2 | X | + |
| exon-intron | RPL36AP9 | 1 | - | AC093151.3 | 1 | - |
| exon-intron | RPL36AP9 | 1 | - | AC093151.8 | 1 | - |
| exon-intron | RPL36AP9 | 1 | - | AC093151.8 | 1 | - |
| exon-intron | RPL36AP9 | 1 | - | AC093151.3 | 1 | - |
| exon-intron | RPL36AP9 | 1 | - | AC093151.3 | 1 | - |
| exon-intron | RPL36AP9 | 1 | - | AC093151.3 | 1 | - |
| exon-intron | RPL36AP9 | 1 | - | AC093151.3 | 1 | - |
| exon-intron | RPL36AP9 | 1 | - | AC093151.8 | 1 | - |
| exon-intron | RPL36AP9 | 1 | - | AC093151.3 | 1 | - |
| exon-intron | RPL36AP9 | 1 | - | AC093151.8 | 1 | - |
| exon-intron | RPL36AP9 | 1 | - | AC093151.8 | 1 | - |
| exon-intron | RPL36AP9 | 1 | - | AC093151.8 | 1 | - |
| exon-exon | RPL37 | 5 | - | LOC100506548 | 5 | - |
| exon-intron | RPL37 | 5 | - | LOC105373592 | 2 | + |
| exon-exon | RPL37 | 5 | - | LOC100506548 | 5 | - |
| exon-exon | RPL37A | 2 | + | LOC101928156 | 2 | + |
| exon-exon | RPL37A | 2 | + | LOC101928180 | 2 | + |
| exon-exon | RPL37A | 2 | + | GPR37L1 | 1 | - |
| exon-exon | RPL37A | 2 | + | MAP3K2 | 2 | + |
| exon-intron | RPL37A | 2 | + | MRPL48 | 11 | - |
| exon-intron | RPL37A | 2 | + | NEB | 2 | - |
| exon-intron | RPL37A | 2 | + | SRL | 16 | + |
| exon-intron | RPL37A | 2 | + | TDRD12 | 19 | - |
| intron-exon | RPL37A-DT | 2 | + | RPL37A | 2 | + |
| exon-intron | RPL37P2 | 11 | - | RBFOX1 | 16 | + |
| exon-intron | RPL37P2 | 11 | - | APOL3 | 22 | + |
| exon-intron | RPL38 | 17 | + | CITED1 | X | - |
| exon-exon | RPL38 | 17 | + | CITED1 | X | - |
| exon-intron | RPL38 | 17 | + | PFKFB4 | 3 | - |
| exon-intron | RPL38 | 17 | + | LINC00856 | 10 | + |
| exon-intron | RPL38 | 17 | + | CMBL | 5 | + |
| exon-intron | RPL38 | 17 | + | LCOR | 10 | - |
| exon-intron | RPL38 | 17 | + | LOC101929028 | 8 | + |
| exon-intron | RPL38 | 17 | + | LOC107985988 | 2 | + |
| exon-intron | RPL38 | 17 | + | SLC24A2 | 9 | + |
| exon-intron | RPL38 | 17 | + | TMCO4 | 1 | - |
| exon-exon | RPL38 | 17 | - | UBE2J2 | 1 | + |
| exon-exon | RPL38 | 17 | - | TEK | 9 | - |
| exon-intron | RPL39 | X | - | PRKY | Y | - |
| intron-exon | RPL39P12 | 1 | + | ISG15 | 1 | + |
| exon-intron | RPL39P3 | 6 | - | LINC00571 | 13 | + |
| exon-exon | RPL3P4 | 14 | + | RPL3 | 22 | + |
| exon-exon | RPL3P4 | 14 | + | RPL3 | 22 | + |
| exon-intron | RPL4 | 15 | - | OSBP | 11 | + |
| exon-exon | RPL4 | 15 | - | RPARP-AS1 | 10 | + |
| exon-intron | RPL41 | 12 | + | IL6ST | 5 | + |
| exon-exon | RPL41 | 12 | - | RBFOX2 | 22 | - |
| exon-exon | RPL6 | 12 | + | LARP4 | 12 | + |
| exon-intron | RPL6 | 12 | + | PTPN11 | 12 | + |
| exon-exon | RPL6 | 12 | - | RPL6P27 | 18 | - |
| exon-intron | RPL6P27 | 18 | - | SUGT1P1 | 9 | + |
| exon-exon | RPL6P27 | 18 | - | RPL6P20 | 7 | - |
| exon-intron | RPL7AP6 | 14 | - | SMOC1 | 14 | - |
| exon-exon | RPL7P9 | 1 | + | HMGB2 | 4 | + |
| exon-intron | RPL7P9 | 1 | - | MOCOS | 18 | + |
| exon-exon | RPL9 | 4 | - | RPL9P8 | 15 | - |
| exon-intron | RPL9P8 | 15 | - | UBE2Q2P2 | 15 | - |
| exon-intron | RPL9P8 | 15 | - | UBE2Q2P2 | 15 | - |
| exon-intron | RPL9P8 | 15 | - | UBE2Q2P2 | 15 | - |
| exon-exon | RPLP0 | 12 | + | NDUFA13 | 19 | + |
| exon-exon | RPLP0 | 12 | - | GCN1 | 12 | - |
| exon-exon | RPLP0 | 12 | - | GCN1 | 12 | - |
| exon-exon | RPLP0 | 12 | - | RPLP0P9 | 5 | + |
| exon-exon | RPLP0 | 12 | - | RPLP0P9 | 5 | + |
| exon-exon | RPLP0 | 12 | - | RPLP0P9 | 5 | + |
| exon-exon | RPLP0 | 12 | - | RPLP0P9 | 5 | + |
| exon-exon | RPLP0 | 12 | - | RPLP0P6 | 2 | + |
| exon-exon | RPLP0 | 12 | - | RPLP0P9 | 5 | + |
| exon-exon | RPLP0 | 12 | - | RPLP0P9 | 5 | + |
| exon-exon | RPLP0 | 12 | - | RPLP0P9 | 5 | + |
| exon-intron | RPLP0P2 | 11 | + | EFCAB6 | 22 | - |
| exon-exon | RPLP0P6 | 2 | + | RPLP0P9 | 5 | + |
| exon-exon | RPLP0P6 | 2 | + | RPLP0P9 | 5 | + |
| exon-exon | RPLP1 | 15 | + | CLTB | 5 | - |
| exon-intron | RPLP1 | 15 | + | RCC2 | 1 | + |
| exon-intron | RPLP2 | 11 | + | DPY19L4 | 8 | + |
| exon-intron | RPLP2 | 11 | - | ZNF420 | 19 | - |
| exon-exon | RPLP2 | 11 | - | RNA45SN3 | 21 | - |
| exon-intron | RPLP2P3 | 11 | + | SLC2A14 | 12 | + |
| exon-exon | RPLP2P3 | 11 | - | SLC35F2 | 11 | - |
| intron-exon | RPN2 | 20 | - | MROH8 | 20 | - |
| intron-exon | RPN2 | 20 | - | MROH8 | 20 | - |
| intron-exon | RPN2 | 20 | - | MROH8 | 20 | - |
| intron-exon | RPN2 | 20 | - | MROH8 | 20 | - |
| intron-exon | RPN2 | 20 | - | MROH8 | 20 | - |
| intron-exon | RPN2 | 20 | - | MROH8 | 20 | - |
| intron-exon | RPN2 | 20 | - | MROH8 | 20 | - |
| exon-exon | RPN2 | 20 | - | MROH8 | 20 | - |
| intron-exon | RPN2 | 20 | - | MROH8 | 20 | - |
| intron-exon | RPN2 | 20 | - | MROH8 | 20 | - |
| intron-exon | RPN2 | 20 | - | MROH8 | 20 | - |
| intron-exon | RPN2 | 20 | - | MROH8 | 20 | - |
| intron-exon | RPN2 | 20 | - | MROH8 | 20 | - |
| intron-exon | RPN2 | 20 | - | MROH8 | 20 | - |
| exon-intron | RPP14 | 3 | - | STK11 | 19 | - |
| exon-intron | RPS10 | 6 | - | NUDT3 | 6 | - |
| exon-exon | RPS10 | 6 | - | NUDT3 | 6 | - |
| exon-exon | RPS10-NUDT3 | 6 | - | SERINC5 | 5 | - |
| exon-intron | RPS12P22 | 11 | - | EVL | 14 | - |
| exon-intron | RPS12P22 | 11 | - | MGC4859 | 7 | + |
| exon-exon | RPS13 | 11 | + | TMEM54 | 1 | - |
| exon-intron | RPS13 | 11 | - | CSNK1G1 | 15 | + |
| exon-intron | RPS13 | 11 | - | ILDR2 | 1 | - |
| exon-intron | RPS13 | 11 | - | CARMIL1 | 6 | + |
| exon-exon | RPS13 | 11 | - | RPS13 | 11 | + |
| exon-exon | RPS14 | 5 | - | PDGFA | 7 | + |
| exon-intron | RPS14 | 5 | - | KCNQ5 | 6 | + |
| exon-intron | RPS14P1 | 1 | - | MAPKAPK2 | 1 | - |
| exon-exon | RPS15A | 16 | + | ARL6IP1 | 16 | + |
| exon-intron | RPS15P4 | 2 | - | LMNTD1 | 12 | + |
| exon-intron | RPS17 | 15 | - | SNX29 | 16 | + |
| exon-exon | RPS17 | 15 | - | LOC107987347 | Y | - |
| exon-exon | RPS17 | 15 | - | SPEN | 1 | - |
| exon-exon | RPS18 | 6 | - | RPS18 | 6 | + |
| exon-intron | RPS18P5 | 3 | - | PCNP | 3 | - |
| exon-intron | RPS18P5 | 3 | - | LOC646548 | 14 | - |
| exon-intron | RPS18P5 | 3 | - | PCNP | 3 | - |
| exon-intron | RPS18P5 | 3 | - | PCNP | 3 | - |
| exon-intron | RPS18P5 | 3 | - | PCNP | 3 | - |
| exon-intron | RPS18P5 | 3 | - | PCNP | 3 | - |
| exon-intron | RPS18P5 | 3 | - | TENM2 | 5 | - |
| exon-intron | RPS19 | 19 | + | CEP164P1 | 10 | - |
| exon-intron | RPS19 | 19 | + | LINC00571 | 13 | + |
| exon-intron | RPS19 | 19 | + | NELL1 | 11 | - |
| intron-exon | RPS19BP1 | 22 | - | C3 | 19 | - |
| exon-intron | RPS2 | 16 | + | ZNF704 | 8 | - |
| exon-intron | RPS2 | 16 | - | HAGH | 16 | - |
| exon-intron | RPS2 | 16 | - | LOC105371574 | 17 | - |
| exon-intron | RPS20 | 8 | - | RBL1 | 20 | - |
| exon-intron | RPS20 | 8 | - | ARFGAP3 | 22 | - |
| exon-intron | RPS21 | 20 | + | EEF1G | 11 | + |
| exon-intron | RPS21 | 20 | + | MID1 | X | - |
| exon-intron | RPS21 | 20 | + | PRMT3 | 11 | - |
| exon-intron | RPS21 | 20 | + | CPD | 17 | - |
| exon-intron | RPS23 | 5 | + | ATP6AP1L | 5 | + |
| exon-intron | RPS23 | 5 | - | SIPA1L1 | 14 | - |
| exon-exon | RPS24 | 10 | + | DNAJC2 | 7 | - |
| exon-intron | RPS24 | 10 | + | FAM193A | 4 | + |
| exon-intron | RPS24 | 10 | + | PIH1D2 | 11 | + |
| exon-intron | RPS24 | 10 | + | ZNF66 | 19 | + |
| exon-intron | RPS24 | 10 | + | HELLS | 10 | - |
| exon-intron | RPS24 | 10 | + | DIXDC1 | 11 | + |
| exon-intron | RPS25P6 | 5 | - | ARL14EPL | 5 | - |
| exon-intron | RPS25P6 | 5 | - | ARL14EPL | 5 | - |
| exon-intron | RPS26P25 | 4 | - | CBX5 | 12 | + |
| exon-exon | RPS27A | 2 | - | BMS1P2-AGAP9 | 10 | + |
| exon-exon | RPS27AP16 | 16 | - | ROCK2 | 2 | - |
| exon-exon | RPS27AP16 | 16 | - | SINHCAFP2 | 18 | - |
| exon-intron | RPS27L | 15 | + | USP3 | 15 | + |
| exon-intron | RPS27P3 | 12 | - | TSPAN9 | 12 | - |
| exon-intron | RPS27P3 | 12 | - | TSPAN9 | 12 | - |
| exon-intron | RPS27P3 | 12 | - | TSPAN9 | 12 | - |
| exon-intron | RPS27P3 | 12 | - | TSPAN9 | 12 | - |
| exon-intron | RPS27P3 | 12 | - | TSPAN9 | 12 | - |
| exon-intron | RPS29 | 14 | - | LOC105376103 | 9 | + |
| exon-intron | RPS29 | 14 | - | GYS1 | 19 | + |
| exon-intron | RPS29 | 14 | - | FRYL | 4 | + |
| exon-intron | RPS29 | 14 | - | ZCCHC7 | 9 | - |
| exon-intron | RPS29 | 14 | - | DPP6 | 7 | - |
| intron-exon | RPS29 | 14 | - | RBMS2 | 12 | - |
| exon-intron | RPS3 | 11 | + | MIATNB | 22 | - |
| exon-exon | RPS3A | 4 | + | SH3D19 | 4 | + |
| exon-exon | RPS3A | 4 | + | RPS3A | 4 | - |
| exon-intron | RPS3AP15 | 3 | + | LOC112267908 | 3 | - |
| exon-intron | RPS3AP25 | 7 | - | BAIAP2L1 | 7 | - |
| exon-exon | RPS4X | X | + | RPS4XP3 | 20 | - |
| exon-exon | RPS4X | X | + | RPS4XP3 | 20 | - |
| exon-exon | RPS4X | X | + | RPS4XP3 | 20 | - |
| exon-intron | RPS4X | X | - | PIN4 | X | - |
| exon-exon | RPS6 | 9 | + | MALAT1 | 11 | + |
| exon-intron | RPS6 | 9 | - | AL391834.2 | 9 | - |
| exon-exon | RPS6KA2 | 6 | + | RNASET2 | 6 | + |
| exon-exon | RPS6KA5 | 14 | - | DDX24 | 14 | - |
| exon-intron | RPS6KA6 | X | + | RABGEF1 | 7 | - |
| exon-exon | RPS6P10 | 9 | + | RPS6 | 9 | + |
| exon-intron | RPS7P1 | 17 | + | PIH1D2 | 11 | + |
| exon-intron | RPS7P1 | 17 | + | ADGRG2 | X | - |
| exon-intron | RPS7P15 | 4 | + | STX18 | 4 | + |
| exon-intron | RPS8 | 1 | - | RPS8P1 | 14 | - |
| intron-exon | RPS8P1 | 14 | + | RPS8 | 1 | + |
| exon-intron | RPS9 | 19 | + | LOC107985279 | 19 | + |
| exon-intron | RPS9 | 19 | + | BAIAP2L1 | 7 | - |
| exon-intron | RPS9P4 | 19 | - | NSD1 | 5 | - |
| exon-intron | RPS9P4 | 19 | - | RBFOX1 | 16 | + |
| exon-exon | RPSA | 3 | - | TUBA1C | 12 | - |
| exon-exon | RPSA | 3 | - | RPSAP58 | 19 | - |
| exon-intron | RPSAP11 | 3 | + | IFNAR2 | 21 | - |
| exon-intron | RPSAP58 | 19 | + | NFAT5 | 16 | + |
| exon-intron | RPSAP58 | 19 | + | RAB7A | 3 | - |
| intron-exon | RPTOR | 17 | + | MTIF2 | 2 | - |
| intron-exon | RREB1 | 6 | - | CIRBP-AS1 | 19 | - |
| exon-exon | RRM1 | 11 | - | RALBP1 | 18 | - |
| exon-exon | RRN3P1 | 16 | + | RRN3P2 | 16 | - |
| intron-exon | RRN3P3 | 16 | - | CDR2 | 16 | - |
| intron-exon | RRN3P3 | 16 | - | CDR2 | 16 | - |
| exon-exon | RRNAD1 | 1 | - | ISG20L2 | 1 | - |
| exon-exon | RRNAD1 | 1 | - | ISG20L2 | 1 | - |
| exon-exon | RRNAD1 | 1 | - | ISG20L2 | 1 | - |
| exon-exon | RRNAD1 | 1 | - | ISG20L2 | 1 | - |
| exon-exon | RRP7A | 22 | - | RRP7BP | 22 | - |
| exon-intron | RRP7BP | 22 | - | SERHL2 | 22 | - |
| exon-intron | RRP7BP | 22 | - | SERHL2 | 22 | - |
| exon-intron | RRP7BP | 22 | - | SERHL2 | 22 | - |
| exon-intron | RRP7BP | 22 | - | SERHL2 | 22 | - |
| exon-exon | RRP7BP | 22 | - | RRP7A | 22 | - |
| intron-exon | RRP7BP | 22 | - | RRP7A | 22 | - |
| exon-intron | RRP7BP | 22 | - | SERHL2 | 22 | - |
| exon-exon | RRS1 | 8 | + | ADHFE1 | 8 | + |
| intron-exon | RSF1 | 11 | + | AAMDC | 11 | + |
| exon-intron | RSKR | 17 | - | SPAG5-AS1 | 17 | - |
| exon-intron | RSKR | 17 | - | SPAG5-AS1 | 17 | - |
| exon-intron | RSL1D1 | 16 | + | P3H2 | 3 | + |
| exon-exon | RSPH1 | 21 | + | LOC101930094 | 21 | + |
| intron-exon | RSPH14 | 22 | + | GNAZ | 22 | + |
| exon-exon | RSPRY1 | 16 | - | PSME3IP1 | 16 | - |
| exon-intron | RSRP1 | 1 | + | BRD1 | 22 | + |
| exon-intron | RTBDN | 19 | + | LOC105372281 | 19 | + |
| exon-exon | RTEL1 | 20 | + | TNFRSF6B | 20 | + |
| intron-exon | RTF1 | 15 | + | TYRO3 | 15 | + |
| exon-intron | RTF2 | 20 | + | GCNT7 | 20 | + |
| exon-exon | RTF2 | 20 | + | FAM209A | 20 | + |
| intron-exon | RTKN2 | 10 | + | ZNF365 | 10 | + |
| exon-exon | RTL1 | 14 | + | ATN1 | 12 | + |
| intron-exon | RTN1 | 14 | + | DHRS7 | 14 | + |
| exon-intron | RTN3 | 11 | - | YME1L1 | 10 | - |
| exon-exon | RTN4 | 2 | + | RTN4 | 2 | - |
| intron-exon | RTN4IP1 | 6 | - | CRYBG1 | 6 | - |
| intron-exon | RTN4IP1 | 6 | - | CRYBG1 | 6 | - |
| exon-intron | RUFY1 | 5 | + | SRC | 20 | + |
| intron-exon | RUFY2 | 10 | - | HNRNPH3 | 10 | - |
| intron-exon | RUFY2 | 10 | - | HNRNPH3 | 10 | - |
| intron-exon | RUFY2 | 10 | - | HNRNPH3 | 10 | - |
| intron-exon | RUFY2 | 10 | - | HNRNPH3 | 10 | - |
| intron-exon | RUFY2 | 10 | - | FUS | 16 | - |
| intron-exon | RUFY2 | 10 | - | HNRNPH3 | 10 | - |
| intron-exon | RUFY2 | 10 | - | HNRNPH3 | 10 | - |
| intron-exon | RUFY2 | 10 | - | HERC4 | 10 | - |
| exon-intron | RUFY2 | 10 | - | ALOX12-AS1 | 17 | - |
| exon-intron | RUFY2 | 10 | - | ALOX12-AS1 | 17 | - |
| exon-intron | RUNX1 | 21 | - | RUNX1T1 | 8 | - |
| exon-intron | RUNX1 | 21 | - | RUNX1T1 | 8 | - |
| exon-exon | RUNX1 | 21 | - | RUNX1T1 | 8 | - |
| exon-exon | RUNX1 | 21 | - | RUNX1T1 | 8 | - |
| exon-intron | RUNX1 | 21 | - | RUNX1T1 | 8 | - |
| exon-exon | RUNX1 | 21 | - | RUNX1T1 | 8 | - |
| exon-exon | RUNX1 | 21 | - | RUNX1T1 | 8 | - |
| exon-exon | RUNX1 | 21 | - | RUNX1T1 | 8 | - |
| exon-exon | RUNX1 | 21 | - | RUNX1T1 | 8 | - |
| exon-intron | RUNX1 | 21 | - | RUNX1T1 | 8 | - |
| intron-exon | RUNX1 | 21 | - | RUNX1T1 | 8 | - |
| exon-intron | RUNX1 | 21 | - | RUNX1T1 | 8 | - |
| exon-exon | RUNX1 | 21 | - | RUNX1T1 | 8 | - |
| exon-exon | RUNX1 | 21 | - | RUNX1T1 | 8 | - |
| exon-exon | RUNX1 | 21 | - | RUNX1T1 | 8 | - |
| exon-exon | RUNX1 | 21 | - | RUNX1T1 | 8 | - |
| exon-exon | RUNX1 | 21 | - | RUNX1T1 | 8 | - |
| exon-intron | RUNX1 | 21 | - | RUNX1T1 | 8 | - |
| exon-intron | RUNX1 | 21 | - | RUNX1T1 | 8 | - |
| exon-exon | RUNX1 | 21 | - | RUNX1T1 | 8 | - |
| exon-exon | RUNX1 | 21 | - | RUNX1T1 | 8 | - |
| exon-exon | RUNX1 | 21 | - | RUNX1T1 | 8 | - |
| exon-exon | RUNX1 | 21 | - | RUNX1T1 | 8 | - |
| exon-intron | RUNX1 | 21 | - | NLRP4 | 19 | - |
| exon-exon | RUNX1 | 21 | - | RUNX1T1 | 8 | - |
| exon-exon | RUNX1 | 21 | - | RUNX1T1 | 8 | - |
| exon-exon | RUNX1 | 21 | - | RUNX1T1 | 8 | - |
| exon-exon | RUNX1 | 21 | - | RUNX1T1 | 8 | - |
| exon-exon | RUNX1 | 21 | - | RUNX1T1 | 8 | - |
| exon-exon | RUNX1 | 21 | - | RUNX1T1 | 8 | - |
| exon-exon | RUSC1-AS1 | 1 | + | RUSC1 | 1 | + |
| intron-exon | RUSC1-AS1 | 1 | - | FDPS | 1 | - |
| intron-exon | RUSC1-AS1 | 1 | - | FDPS | 1 | - |
| intron-exon | RUSC1-AS1 | 1 | - | FDPS | 1 | - |
| exon-exon | RUSC1-AS1 | 1 | - | FDPS | 1 | - |
| exon-exon | RUSC1-AS1 | 1 | - | FDPS | 1 | - |
| exon-exon | RUSC1-AS1 | 1 | - | FDPS | 1 | - |
| exon-exon | RUSC1-AS1 | 1 | - | FDPS | 1 | - |
| exon-exon | RUSC1-AS1 | 1 | - | FDPS | 1 | - |
| exon-exon | RUSC1-AS1 | 1 | - | FDPS | 1 | - |
| exon-exon | RUSC1-AS1 | 1 | - | FDPS | 1 | - |
| exon-exon | RUSC1-AS1 | 1 | - | FDPS | 1 | - |
| exon-exon | RUSC1-AS1 | 1 | - | FDPS | 1 | - |
| exon-exon | RUSC1-AS1 | 1 | - | FDPS | 1 | - |
| exon-exon | RUSC1-AS1 | 1 | - | GPI | 19 | - |
| intron-exon | RUSC2 | 9 | + | FAM166B | 9 | + |
| exon-exon | RUSF1 | 16 | - | SLC5A2 | 16 | - |
| intron-exon | RWDD2A | 6 | - | PGM3 | 6 | - |
| intron-exon | RWDD2A | 6 | - | PGM3 | 6 | - |
| exon-intron | RXRB | 6 | - | SAMD12 | 8 | - |
| intron-exon | RXYLT1-AS1 | 12 | - | RXYLT1 | 12 | - |
| exon-intron | RYBP | 3 | + | ARSDP1 | Y | - |
| exon-intron | S100A10 | 1 | + | LOC105371441 | 1 | + |
| exon-exon | S100A11 | 1 | + | LARP1B | 4 | - |
| intron-exon | S100A11P3 | 11 | - | NADSYN1 | 11 | - |
| intron-exon | S100A13 | 1 | + | S100A1 | 1 | + |
| exon-intron | S100A16 | 1 | - | BX470102.2 | 1 | - |
| exon-intron | S100A2 | 1 | - | LOC105376294 | 9 | - |
| exon-exon | S100A4 | 1 | + | FKBP1C | 6 | + |
| exon-intron | S100A4 | 1 | - | VPS13B | 8 | - |
| exon-exon | S100A8 | 1 | + | S100A8 | 1 | - |
| exon-intron | S100A8 | 1 | - | ZADH2 | 18 | + |
| exon-exon | S100A8 | 1 | - | AQR | 15 | - |
| exon-exon | S100A8 | 1 | - | POSTN | 13 | - |
| exon-exon | S100A8 | 1 | - | AQR | 15 | - |
| exon-exon | S100A8 | 1 | - | B2M | 15 | - |
| exon-exon | S100A8 | 1 | - | B2M | 15 | - |
| exon-exon | S100A9 | 1 | + | KRT4 | 12 | - |
| exon-intron | S100A9 | 1 | - | LOC107986282 | 4 | - |
| exon-exon | S1PR2 | 19 | - | DNMT1 | 19 | - |
| exon-exon | SAA1 | 11 | + | GYS2 | 12 | - |
| exon-exon | SAA2 | 11 | - | SAA4 | 11 | - |
| exon-exon | SAA2-SAA4 | 11 | - | BCL6 | 3 | - |
| exon-intron | SAC3D1 | 11 | + | NAALADL1 | 11 | + |
| exon-exon | SAFB | 19 | + | CALM2 | 2 | - |
| intron-exon | SAFB | 19 | - | SAFB2 | 19 | - |
| exon-exon | SAMD10 | 20 | + | SERBP1 | 1 | - |
| intron-exon | SAMD12-AS1 | 8 | - | SAMD12 | 8 | - |
| exon-intron | SAMD14 | 17 | + | LARP1 | 5 | - |
| exon-intron | SAMD14 | 17 | + | LARP1 | 5 | - |
| exon-intron | SAMD4A | 14 | + | PFKM | 12 | + |
| exon-exon | SAMD4A | 14 | - | SAMD4A | 14 | + |
| intron-exon | SAMD4B | 19 | - | ATP6 | MT | + |
| exon-intron | SAMM50 | 22 | + | INPP5J | 22 | + |
| exon-intron | SAP30 | 4 | - | SAP30-DT | 4 | - |
| exon-intron | SAP30BP | 17 | - | BEAN1 | 16 | + |
| exon-intron | SAP30BP | 17 | - | BEAN1 | 16 | + |
| intron-exon | SAP30L-AS1 | 5 | - | GALNT10 | 5 | - |
| exon-exon | SAR1A | 10 | - | AIFM2 | 10 | - |
| intron-exon | SAR1A | 10 | - | AIFM2 | 10 | - |
| exon-exon | SAR1B | 5 | - | SAR1B | 5 | + |
| exon-exon | SARAF | 8 | + | CYTB | MT | + |
| intron-exon | SARM1 | 17 | - | VTN | 17 | - |
| intron-exon | SARM1 | 17 | - | VTN | 17 | - |
| intron-exon | SARNP | 12 | + | DNAJC14 | 12 | + |
| intron-exon | SARNP | 12 | + | DNAJC14 | 12 | + |
| intron-exon | SARNP | 12 | - | GDF11 | 12 | - |
| intron-exon | SART3 | 12 | - | FICD | 12 | - |
| intron-exon | SART3 | 12 | - | FICD | 12 | - |
| exon-exon | SAT1 | X | + | ANKH | 5 | - |
| exon-exon | SAT1 | X | - | MPHOSPH8 | 13 | - |
| exon-exon | SAT1 | X | - | SAT1 | X | + |
| exon-exon | SAXO1 | 9 | + | RRAGA | 9 | + |
| exon-exon | SBDS | 7 | + | TYW1 | 7 | + |
| exon-intron | SBDS | 7 | - | TIAM1 | 21 | - |
| exon-intron | SBSN | 19 | - | LGR4 | 11 | - |
| exon-intron | SCAF8 | 6 | - | RANBP17 | 5 | + |
| exon-intron | SCARB2 | 4 | + | CCDC158 | 4 | + |
| exon-intron | SCD | 10 | + | RALYL | 8 | - |
| exon-intron | SCD | 10 | + | LOC107984736 | 15 | - |
| exon-exon | SCEL-AS1 | 13 | - | SCEL | 13 | - |
| intron-exon | SCFD1 | 14 | + | STAG3L1 | 7 | + |
| intron-exon | SCGB1B2P | 19 | - | UBE2CP5 | 19 | + |
| exon-exon | SCLT1 | 4 | - | JADE1 | 4 | - |
| intron-exon | SCN1A-AS1 | 2 | + | RAB11B | 19 | + |
| exon-intron | SCNN1A | 12 | + | LOC107984500 | 12 | + |
| intron-exon | SCNN1A | 12 | + | LOC105369626 | 12 | + |
| intron-exon | SCOC-AS1 | 4 | - | ND2 | MT | + |
| intron-exon | SCP2 | 1 | + | TGFBR2 | 3 | + |
| exon-exon | SCRT2 | 20 | - | LOC107985423 | 20 | - |
| exon-exon | SCUBE2 | 11 | - | LOC105376542 | 11 | - |
| exon-exon | SCYL1 | 11 | + | LTBP3 | 11 | + |
| exon-exon | SCYL3 | 1 | - | C1orf112 | 1 | - |
| exon-exon | SCYL3 | 1 | - | C1orf112 | 1 | - |
| exon-exon | SCYL3 | 1 | - | C1orf112 | 1 | - |
| exon-exon | SCYL3 | 1 | - | C1orf112 | 1 | - |
| exon-intron | SDAD1 | 4 | + | SDAD1-AS1 | 4 | + |
| exon-intron | SDAD1 | 4 | + | SDAD1-AS1 | 4 | + |
| exon-exon | SDAD1 | 4 | - | NAAA | 4 | - |
| exon-exon | SDAD1 | 4 | - | HSPA8 | 11 | - |
| exon-exon | SDC2 | 8 | + | AP1M1 | 19 | - |
| exon-intron | SDC4 | 20 | - | CECR2 | 22 | - |
| exon-intron | SDCCAG8 | 1 | + | AKT3 | 1 | + |
| exon-intron | SDCCAG8 | 1 | + | SPAG9 | 17 | + |
| exon-exon | SDCCAG8 | 1 | - | CEP170 | 1 | - |
| exon-exon | SDHAF2 | 11 | + | PPP1R32 | 11 | + |
| exon-intron | SDHAF2 | 11 | + | AP003108.2 | 11 | + |
| exon-exon | SDHAF2 | 11 | + | PPP1R32 | 11 | + |
| exon-exon | SDHAF2 | 11 | + | PPP1R32 | 11 | + |
| intron-exon | SDHAF2 | 11 | + | PPP1R32 | 11 | + |
| exon-exon | SDHAF2 | 11 | + | PPP1R32 | 11 | + |
| exon-exon | SDHAF2 | 11 | + | PPP1R32 | 11 | + |
| exon-exon | SDHAP2 | 3 | + | MIR570HG | 3 | + |
| intron-exon | SDHC | 1 | + | CFAP126 | 1 | + |
| exon-exon | SDHD | 11 | + | BCO2 | 11 | + |
| exon-exon | SDHD | 11 | + | TEX12 | 11 | + |
| exon-exon | SDSL | 12 | + | MBOAT7 | 19 | - |
| intron-exon | SEBOX | 17 | + | SARM1 | 17 | + |
| exon-intron | SEC13 | 3 | - | CACNG6 | 19 | + |
| exon-exon | SEC14L2 | 22 | + | MTFP1 | 22 | + |
| intron-exon | SEC14L5 | 16 | - | PPL | 16 | - |
| exon-exon | SEC1P | 19 | + | FUT2 | 19 | + |
| exon-exon | SEC22A | 3 | - | PDIA5 | 3 | - |
| exon-exon | SEC22A | 3 | - | PDIA5 | 3 | - |
| exon-exon | SEC22A | 3 | - | PDIA5 | 3 | - |
| exon-exon | SEC22A | 3 | - | PDIA5 | 3 | - |
| exon-exon | SEC23A | 14 | + | SEC23A | 14 | - |
| exon-exon | SEC23A-AS1 | 14 | - | SEC23A | 14 | - |
| exon-exon | SEC23A-AS1 | 14 | - | SEC23A | 14 | - |
| exon-exon | SEC23A-AS1 | 14 | - | SEC23A | 14 | - |
| exon-exon | SEC23A-AS1 | 14 | - | SEC23A | 14 | - |
| exon-exon | SEC23A-AS1 | 14 | - | SEC23A | 14 | - |
| exon-exon | SEC23A-AS1 | 14 | - | SEC23A | 14 | - |
| intron-exon | SEC24A | 5 | - | SAR1B | 5 | - |
| intron-exon | SEC24A | 5 | - | SAR1B | 5 | - |
| exon-intron | SEC24C | 10 | - | LINC02365 | 4 | + |
| exon-intron | SEC24D | 4 | - | LINC01695 | 21 | - |
| exon-exon | SEC61A2 | 10 | + | NUDT5 | 10 | + |
| exon-exon | SEC61A2 | 10 | + | NUDT5 | 10 | + |
| exon-intron | SEC61A2 | 10 | - | DHTKD1 | 10 | - |
| exon-exon | SEC61A2 | 10 | - | DHTKD1 | 10 | - |
| exon-exon | SEC61A2 | 10 | - | DHTKD1 | 10 | - |
| exon-exon | SEC61A2 | 10 | - | DHTKD1 | 10 | - |
| exon-exon | SEC61A2 | 10 | - | DHTKD1 | 10 | - |
| exon-intron | SELENON | 1 | + | MTFR1L | 1 | + |
| exon-exon | SELENOP | 5 | - | CCDC152 | 5 | - |
| exon-exon | SEM1 | 7 | - | HSP90AA1 | 14 | - |
| exon-exon | SEM1 | 7 | - | HSP90AA1 | 14 | - |
| exon-intron | SEM1P1 | 5 | + | RBM42 | 19 | - |
| exon-exon | SEMA3F-AS1 | 3 | - | RBM5 | 3 | - |
| exon-exon | SEMA3F-AS1 | 3 | - | RBM5 | 3 | - |
| intron-exon | SEMA3F-AS1 | 3 | - | RBM5 | 3 | - |
| intron-exon | SEMA3F-AS1 | 3 | - | RBM5 | 3 | - |
| intron-exon | SEMA3F-AS1 | 3 | - | RBM5 | 3 | - |
| intron-exon | SEMA3F-AS1 | 3 | - | RBM5 | 3 | - |
| intron-exon | SEMA3F-AS1 | 3 | - | RBM5 | 3 | - |
| intron-exon | SEMA3F-AS1 | 3 | - | RBM5 | 3 | - |
| intron-exon | SEMA4A | 1 | - | FAM76A | 1 | + |
| exon-exon | SEMA4G | 10 | + | MRPL43 | 10 | + |
| exon-intron | SEMA6A | 5 | + | SEMA6A-AS1 | 5 | + |
| exon-intron | SEMA6A | 5 | - | DLG5 | 10 | + |
| exon-intron | SEMA6A | 5 | - | DLG5 | 10 | + |
| exon-intron | SEMA6A | 5 | - | DLG5 | 10 | + |
| exon-intron | SEMA6A | 5 | - | DLG5 | 10 | + |
| exon-exon | SEMG1 | 20 | + | SEMG2 | 20 | + |
| exon-exon | SENP1 | 12 | - | MSRB3 | 12 | + |
| exon-intron | SENP2 | 3 | + | ETF1 | 5 | + |
| exon-exon | SENP3-EIF4A1 | 17 | - | LRRC75A | 17 | - |
| exon-intron | SENP3-EIF4A1 | 17 | - | PCDH11X | X | + |
| exon-intron | SENP3-EIF4A1 | 17 | - | PCDH11X | X | + |
| exon-exon | SEPHS1 | 10 | - | SEPHS1P4 | X | + |
| intron-exon | SEPSECS | 4 | + | PI4K2B | 4 | + |
| exon-exon | SEPSECS-AS1 | 4 | + | PI4K2B | 4 | + |
| exon-exon | SEPT5-GP1BB | 22 | + | SEPT5-GP1BB | 22 | + |
| exon-exon | SEPT5-GP1BB | 22 | + | SEPT5-GP1BB | 22 | + |
| exon-intron | SEPTIN1 | 16 | + | ZNF48 | 16 | + |
| exon-exon | SEPTIN1 | 16 | + | ZNF48 | 16 | + |
| exon-exon | SEPTIN1 | 16 | + | ZNF48 | 16 | + |
| exon-intron | SEPTIN1 | 16 | + | ZNF48 | 16 | + |
| exon-intron | SEPTIN1 | 16 | + | ZNF48 | 16 | + |
| exon-intron | SEPTIN1 | 16 | + | ZNF48 | 16 | + |
| exon-intron | SEPTIN1 | 16 | + | ZNF48 | 16 | + |
| exon-intron | SEPTIN14P14 | 1 | + | CICP15 | 5 | - |
| exon-intron | SEPTIN14P15 | 1 | + | CICP5 | 1 | + |
| exon-intron | SEPTIN14P19 | 19 | + | CICP15 | 5 | - |
| intron-exon | SEPTIN2 | 2 | - | HDLBP | 2 | - |
| exon-exon | SEPTIN3 | 22 | + | WBP2NL | 22 | + |
| exon-exon | SEPTIN4-AS1 | 17 | + | TEX14 | 17 | + |
| intron-exon | SEPTIN5 | 22 | + | SEPT5-GP1BB | 22 | + |
| intron-exon | SEPTIN7 | 7 | + | PTP4A1 | 6 | + |
| exon-exon | SEPTIN7 | 7 | + | SEPTIN7P3 | 7 | + |
| exon-exon | SEPTIN7 | 7 | + | SEPTIN7P3 | 7 | + |
| exon-exon | SEPTIN8 | 5 | - | CCNI2 | 5 | - |
| exon-exon | SEPTIN9 | 17 | - | HNRNPA3P6 | 3 | - |
| exon-intron | SERBP1 | 1 | + | GHR | 5 | + |
| exon-intron | SERBP1 | 1 | - | ZBTB32 | 19 | + |
| intron-exon | SERF1A | 5 | - | DMKN | 19 | - |
| exon-intron | SERF2-C15ORF63 | 15 | + | SLC25A13 | 7 | + |
| exon-exon | SERF2-C15ORF63 | 15 | + | SERF2-C15ORF63 | 15 | + |
| exon-exon | SERF2-C15ORF63 | 15 | + | SERF2-C15ORF63 | 15 | + |
| exon-exon | SERF2-C15ORF63 | 15 | + | SERF2-C15ORF63 | 15 | + |
| exon-exon | SERF2-C15ORF63 | 15 | + | SERF2-C15ORF63 | 15 | + |
| exon-exon | SERF2-C15ORF63 | 15 | + | SERF2-C15ORF63 | 15 | + |
| exon-exon | SERF2-C15ORF63 | 15 | + | SERF2-C15ORF63 | 15 | + |
| exon-exon | SERF2-C15ORF63 | 15 | + | SERF2-C15ORF63 | 15 | + |
| exon-exon | SERF2-C15ORF63 | 15 | + | SERF2-C15ORF63 | 15 | + |
| exon-exon | SERF2-C15ORF63 | 15 | + | HYPK | 15 | + |
| exon-exon | SERGEF | 11 | + | TPH1 | 11 | + |
| intron-exon | SERHL2 | 22 | + | RRP7BP | 22 | + |
| exon-exon | SERINC1 | 6 | - | OGA | 10 | - |
| exon-intron | SERP1 | 3 | - | EIF2A | 3 | - |
| exon-intron | SERP1 | 3 | - | EIF2A | 3 | - |
| exon-intron | SERP1 | 3 | - | EIF2A | 3 | - |
| exon-intron | SERP1 | 3 | - | EIF2A | 3 | - |
| exon-exon | SERP1 | 3 | - | EIF2A | 3 | - |
| exon-exon | SERP1 | 3 | - | EIF2A | 3 | - |
| exon-intron | SERP1 | 3 | - | EIF2A | 3 | - |
| exon-intron | SERP1 | 3 | - | EIF2A | 3 | - |
| exon-exon | SERPINA1 | 14 | + | RPL23 | 17 | - |
| exon-intron | SERPINA3 | 14 | + | ZNF528-AS1 | 19 | - |
| exon-exon | SERPINA3 | 14 | - | SERPINA3 | 14 | + |
| exon-exon | SERPINA3 | 14 | - | SERPINA3 | 14 | + |
| exon-intron | SERPINA4 | 14 | + | SERPINA5 | 14 | + |
| exon-exon | SERPINA4 | 14 | + | SERPINA5 | 14 | + |
| exon-intron | SERPINA5 | 14 | + | LOC112268127 | 14 | + |
| exon-exon | SERPINB10 | 18 | - | SERPINB2 | 18 | - |
| exon-exon | SERPINB3 | 18 | + | SERPINB11 | 18 | + |
| exon-exon | SERPINB3 | 18 | - | SERPINB4 | 18 | - |
| exon-intron | SERPINB9 | 6 | - | PLCB1 | 20 | - |
| exon-exon | SERPINC1 | 1 | - | ZBTB37 | 1 | - |
| exon-intron | SERPINE1 | 7 | + | RP11-527N12.2 | 13 | - |
| exon-intron | SERPING1 | 11 | + | CAP2 | 6 | + |
| intron-exon | SERPINI2 | 3 | + | LOC105374197 | 3 | + |
| exon-intron | SERPINI2 | 3 | + | LOC105374197 | 3 | + |
| exon-exon | SERTAD3 | 19 | + | LOC105372489 | 19 | + |
| exon-intron | SERTAD4-AS1 | 1 | + | SERTAD4 | 1 | + |
| exon-exon | SET | 9 | + | SETP14 | 3 | + |
| exon-intron | SET | 9 | + | PARD3 | 10 | - |
| exon-intron | SET | 9 | + | AF130359.1 | 21 | + |
| exon-intron | SET | 9 | + | WAPL | 10 | + |
| exon-exon | SET | 9 | - | SETP14 | 3 | - |
| exon-exon | SETD3 | 14 | + | CCNK | 14 | + |
| exon-intron | SETD5 | 3 | + | BRINP3 | 1 | - |
| exon-exon | SETD6 | 16 | + | CNOT1 | 16 | + |
| exon-exon | SETDB2 | 13 | + | PHF11 | 13 | + |
| exon-exon | SETDB2 | 13 | + | PHF11 | 13 | + |
| exon-exon | SETDB2-PHF11 | 13 | + | PHF11 | 13 | + |
| intron-exon | SETDB2-PHF11 | 13 | - | STEAP2 | 7 | - |
| exon-exon | SETDB2-PHF11 | 13 | - | SETDB2-PHF11 | 13 | - |
| exon-intron | SF3A2 | 19 | + | LOC108783649 | 19 | + |
| exon-exon | SF3A3 | 1 | - | ZNF83 | 19 | - |
| exon-intron | SF3A3 | 1 | - | RIOK3 | 18 | - |
| exon-exon | SF3B2 | 11 | - | PRCC | 1 | - |
| exon-intron | SF3B3 | 16 | - | POLR2J3 | 7 | - |
| exon-exon | SFI1 | 22 | + | PISD | 22 | + |
| exon-intron | SFI1 | 22 | - | EIF4ENIF1 | 22 | - |
| intron-exon | SFMBT1 | 3 | + | RFT1 | 3 | + |
| intron-exon | SFMBT1 | 3 | + | RFT1 | 3 | + |
| exon-intron | SFMBT1 | 3 | + | AC096887.2 | 3 | + |
| exon-exon | SFPQ | 1 | + | SFPQ | 1 | - |
| exon-exon | SFPQ | 1 | + | SFPQ | 1 | - |
| exon-exon | SFPQ | 1 | - | ITGB7 | 12 | + |
| intron-exon | SFSWAP | 12 | - | CYP11A1 | 15 | + |
| intron-exon | SFSWAP | 12 | - | CYP11A1 | 15 | + |
| exon-intron | SFT2D1 | 6 | - | LOC102724532 | 17 | + |
| exon-exon | SFT2D2 | 1 | + | TBX19 | 1 | + |
| exon-intron | SFTA1P | 10 | - | CELF2 | 10 | - |
| exon-intron | SFXN3 | 10 | + | CHCHD2 | 7 | - |
| exon-exon | SGK2 | 20 | - | L3MBTL1 | 20 | - |
| exon-exon | SGMS1-AS1 | 10 | - | SGMS1 | 10 | - |
| exon-exon | SGMS1-AS1 | 10 | - | SGMS1 | 10 | - |
| intron-exon | SGMS2 | 4 | + | SUN1 | 7 | - |
| intron-exon | SGO2 | 2 | - | KCTD18 | 2 | - |
| intron-exon | SGO2 | 2 | - | KCTD18 | 2 | - |
| intron-exon | SGO2 | 2 | - | KCTD18 | 2 | - |
| intron-exon | SGSH | 17 | + | SLC26A11 | 17 | + |
| exon-exon | SGSM2 | 17 | - | TSR1 | 17 | - |
| exon-exon | SGSM3 | 22 | - | ADSL | 22 | - |
| exon-exon | SGSM3 | 22 | - | ADSL | 22 | - |
| exon-intron | SH2B3 | 12 | - | ATXN2 | 12 | - |
| exon-intron | SH3BGRL3 | 1 | - | ARL10 | 5 | + |
| exon-intron | SH3D19 | 4 | + | LOC107986196 | 4 | + |
| exon-intron | SH3D19 | 4 | + | LOC107986196 | 4 | + |
| intron-exon | SH3KBP1 | X | - | NDUFA6 | 22 | - |
| intron-exon | SH3PXD2A | 10 | + | SH3PXD2A-AS1 | 10 | + |
| intron-exon | SH3PXD2A | 10 | - | ERC2 | 3 | - |
| intron-exon | SHANK3 | 22 | + | PARP8 | 5 | - |
| exon-exon | SHC1 | 1 | - | PYGO2 | 1 | - |
| exon-intron | SHC1 | 1 | - | PYGO2 | 1 | - |
| exon-exon | SHC1 | 1 | - | PYGO2 | 1 | - |
| intron-exon | SHC4 | 15 | + | EID1 | 15 | + |
| exon-intron | SHISA5 | 3 | + | OCIAD1 | 4 | + |
| exon-exon | SHLD2 | 10 | - | GLUD1 | 10 | - |
| exon-exon | SHLD2 | 10 | - | GLUD1 | 10 | - |
| exon-exon | SHLD2 | 10 | - | GLUD1 | 10 | - |
| exon-exon | SHLD2 | 10 | - | GLUD1 | 10 | - |
| exon-exon | SHLD2 | 10 | - | GLUD1 | 10 | - |
| exon-exon | SHLD2 | 10 | - | GLUD1 | 10 | - |
| exon-exon | SHMT1 | 17 | - | SMCR8 | 17 | - |
| exon-exon | SHMT1 | 17 | - | SMCR8 | 17 | - |
| exon-intron | SHPK | 17 | - | TRPV1 | 17 | - |
| exon-intron | SHPK | 17 | - | TRPV1 | 17 | - |
| exon-exon | SHROOM3 | 4 | + | CCNI | 4 | - |
| exon-exon | SHTN1 | 10 | - | ENO4 | 10 | - |
| exon-intron | SIAH2 | 3 | + | LOC105374155 | 3 | + |
| exon-intron | SIGLEC11 | 19 | - | IL4I1 | 19 | - |
| exon-intron | SIGLEC11 | 19 | - | IL4I1 | 19 | - |
| intron-exon | SIGLEC14 | 19 | - | SIGLEC5 | 19 | - |
| intron-exon | SIGLEC14 | 19 | - | SIGLEC5 | 19 | - |
| exon-intron | SIGLEC14 | 19 | - | MTATP6P1 | 1 | - |
| exon-intron | SIK2 | 11 | + | PPP2R1B | 11 | + |
| exon-exon | SIKE1 | 1 | - | CSDE1 | 1 | - |
| exon-exon | SIKE1 | 1 | - | CSDE1 | 1 | - |
| exon-intron | SIN3A | 15 | - | AC068338.2 | 15 | - |
| exon-intron | SINHCAF | 12 | + | DENND5B-AS1 | 12 | + |
| exon-intron | SINHCAF | 12 | - | AC024940.5 | 12 | - |
| exon-exon | SIRPB1 | 20 | - | SIRPD | 20 | - |
| exon-exon | SIRPB1 | 20 | - | SIRPD | 20 | - |
| exon-exon | SIRPB1 | 20 | - | SIRPD | 20 | - |
| intron-exon | SIRPD | 20 | + | SIRPB1 | 20 | + |
| intron-exon | SIRPG | 20 | + | SIRPG-AS1 | 20 | + |
| exon-exon | SIRT2 | 19 | + | NFKBIB | 19 | + |
| exon-exon | SIRT4 | 12 | - | KRT13 | 17 | - |
| exon-intron | SIRT5 | 6 | - | LOC105374938 | 6 | - |
| exon-intron | SIRT5 | 6 | - | LOC105374938 | 6 | - |
| exon-intron | SIRT5 | 6 | - | LOC105374938 | 6 | - |
| exon-intron | SIRT5 | 6 | - | LOC105374938 | 6 | - |
| exon-intron | SIRT5 | 6 | - | LOC105374938 | 6 | - |
| exon-intron | SIRT5 | 6 | - | LOC105374938 | 6 | - |
| exon-intron | SIRT5 | 6 | - | LOC105374938 | 6 | - |
| exon-intron | SIRT5 | 6 | - | LOC105374938 | 6 | - |
| exon-exon | SIX3 | 2 | - | SIX3 | 2 | + |
| exon-intron | SKA1 | 18 | + | TAF7L | X | - |
| exon-intron | SKP1 | 5 | + | AC104109.3 | 5 | + |
| exon-exon | SKP1 | 5 | + | MIR3661 | 5 | + |
| exon-exon | SKP1 | 5 | + | PPP2CA | 5 | + |
| exon-intron | SKP1 | 5 | - | EVL | 14 | - |
| exon-intron | SKP1 | 5 | - | VPS13C | 15 | - |
| exon-exon | SKP1P1 | 7 | - | SKP1 | 5 | - |
| intron-exon | SLA | 8 | - | TG | 8 | - |
| intron-exon | SLA | 8 | - | TG | 8 | - |
| intron-exon | SLA | 8 | - | TG | 8 | - |
| intron-exon | SLA | 8 | - | TG | 8 | - |
| exon-exon | SLC12A2 | 5 | - | EIF3I | 1 | + |
| exon-exon | SLC12A6 | 15 | - | EMC4 | 15 | - |
| exon-exon | SLC12A6 | 15 | - | EMC4 | 15 | - |
| exon-exon | SLC12A6 | 15 | - | EMC4 | 15 | - |
| exon-exon | SLC12A6 | 15 | - | EMC4 | 15 | - |
| exon-exon | SLC12A6 | 15 | - | EMC4 | 15 | - |
| exon-exon | SLC12A6 | 15 | - | EMC4 | 15 | - |
| exon-intron | SLC12A6 | 15 | - | EMC4 | 15 | - |
| exon-exon | SLC12A6 | 15 | - | EMC4 | 15 | - |
| exon-intron | SLC12A6 | 15 | - | EMC4 | 15 | - |
| exon-exon | SLC12A6 | 15 | - | EMC4 | 15 | - |
| exon-intron | SLC12A6 | 15 | - | EMC4 | 15 | - |
| exon-exon | SLC12A6 | 15 | - | EMC4 | 15 | - |
| exon-exon | SLC12A6 | 15 | - | TES | 7 | + |
| exon-intron | SLC12A8 | 3 | - | HTN1 | 4 | + |
| exon-intron | SLC12A9 | 7 | + | ZNF573 | 19 | - |
| intron-exon | SLC12A9 | 7 | - | EPHB4 | 7 | - |
| exon-intron | SLC13A3 | 20 | + | TP53RK | 20 | + |
| intron-exon | SLC13A3 | 20 | + | MPHOSPH10 | 2 | + |
| exon-intron | SLC13A4 | 7 | + | LOC105375521 | 7 | + |
| exon-intron | SLC13A4 | 7 | + | LOC105375521 | 7 | + |
| exon-intron | SLC13A4 | 7 | + | LOC105375521 | 7 | + |
| exon-intron | SLC13A4 | 7 | + | LOC105375521 | 7 | + |
| exon-intron | SLC14A2-AS1 | 18 | - | SLC14A2 | 18 | - |
| exon-exon | SLC15A3 | 11 | - | TMEM132A | 11 | - |
| exon-intron | SLC16A1-AS1 | 1 | + | LOC110121184 | 1 | + |
| exon-exon | SLC16A1-AS1 | 1 | - | SLC16A1 | 1 | - |
| intron-exon | SLC16A3 | 17 | + | CYBC1 | 17 | + |
| exon-intron | SLC16A6 | 17 | - | ARSG | 17 | - |
| intron-exon | SLC17A1 | 6 | + | HFE | 6 | + |
| intron-exon | SLC17A1 | 6 | + | SLC17A4 | 6 | + |
| exon-exon | SLC19A1 | 21 | - | CALM3 | 19 | + |
| exon-exon | SLC1A7 | 1 | - | PODN | 1 | - |
| exon-exon | SLC20A2 | 8 | + | CYB5A | 18 | - |
| intron-exon | SLC20A2 | 8 | + | SMIM19 | 8 | + |
| exon-exon | SLC20A2 | 8 | + | SMIM19 | 8 | + |
| intron-exon | SLC22A15 | 1 | - | LOC101928977 | 1 | - |
| exon-exon | SLC22A25 | 11 | + | SLC22A10 | 11 | + |
| exon-exon | SLC22A3 | 6 | + | LPAL2 | 6 | + |
| exon-exon | SLC22A4 | 5 | - | P4HA2 | 5 | - |
| intron-exon | SLC23A1 | 5 | - | PAIP2 | 5 | - |
| intron-exon | SLC23A1 | 5 | - | PAIP2 | 5 | - |
| exon-intron | SLC23A2 | 20 | - | LOC105376126 | 9 | - |
| intron-exon | SLC23A2 | 20 | - | RFT1 | 3 | + |
| exon-exon | SLC25A1 | 22 | - | JUN | 1 | - |
| exon-exon | SLC25A1 | 22 | - | JUN | 1 | - |
| exon-exon | SLC25A11 | 17 | + | RNF167 | 17 | + |
| intron-exon | SLC25A18 | 22 | + | ATP6V1E1 | 22 | + |
| intron-exon | SLC25A18 | 22 | + | ATP6V1E1 | 22 | + |
| intron-exon | SLC25A20 | 3 | + | SLC49A4 | 3 | + |
| exon-exon | SLC25A21-AS1 | 14 | - | SLC25A21 | 14 | - |
| intron-exon | SLC25A27 | 6 | + | TDRD6 | 6 | + |
| exon-intron | SLC25A3 | 12 | + | SEC14L5 | 16 | - |
| exon-exon | SLC25A33 | 1 | - | LOC653698 | 11 | + |
| exon-exon | SLC25A33 | 1 | - | LOC653698 | 11 | + |
| intron-exon | SLC25A34-AS1 | 1 | + | TMEM82 | 1 | + |
| exon-exon | SLC25A35 | 17 | + | RANGRF | 17 | + |
| exon-exon | SLC25A35 | 17 | + | RANGRF | 17 | + |
| intron-exon | SLC25A35 | 17 | - | UBB | 17 | + |
| intron-exon | SLC25A43 | X | + | HNRNPL | 19 | - |
| intron-exon | SLC25A46 | 5 | - | TMEM232 | 5 | - |
| exon-exon | SLC25A48 | 5 | - | CXCL14 | 5 | - |
| exon-exon | SLC25A48 | 5 | - | CXCL14 | 5 | - |
| exon-exon | SLC25A5-AS1 | X | + | SLC25A5 | X | + |
| exon-exon | SLC25A51 | 9 | - | DCAF10 | 9 | - |
| exon-exon | SLC25A51 | 9 | - | DCAF10 | 9 | - |
| exon-intron | SLC25A6 | Y | + | WDR27 | 6 | + |
| exon-exon | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-exon | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-exon | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-exon | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-exon | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-exon | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-exon | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-exon | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-exon | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-exon | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-exon | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-exon | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-exon | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-exon | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-exon | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-exon | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-exon | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-exon | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-exon | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-exon | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-exon | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-exon | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-exon | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-exon | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-exon | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-intron | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-exon | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-exon | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-exon | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-exon | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-exon | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-exon | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-exon | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-exon | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-intron | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-exon | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-exon | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-exon | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-exon | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-exon | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-exon | SLC26A11 | 17 | - | SGSH | 17 | - |
| exon-exon | SLC26A11 | 17 | - | SGSH | 17 | - |
| intron-exon | SLC26A4 | 7 | - | SLC26A4-AS1 | 7 | - |
| intron-exon | SLC26A4 | 7 | - | SLC26A4-AS1 | 7 | - |
| intron-exon | SLC26A5 | 7 | - | PSMC2 | 7 | - |
| exon-exon | SLC27A2 | 15 | - | ATP8B4 | 15 | - |
| intron-exon | SLC27A4 | 9 | - | PRKCSH | 19 | - |
| exon-intron | SLC28A3 | 9 | + | LOC105376116 | 9 | + |
| exon-exon | SLC2A1-AS1 | 1 | - | SLC2A1 | 1 | - |
| exon-exon | SLC2A1-AS1 | 1 | - | SLC2A1 | 1 | - |
| intron-exon | SLC2A14 | 12 | + | NANOGP1 | 12 | + |
| exon-exon | SLC30A10 | 1 | - | LOC105372926 | 1 | - |
| exon-exon | SLC30A4 | 15 | + | HMGN2P46 | 15 | + |
| exon-exon | SLC30A4 | 15 | + | HMGN2P46 | 15 | + |
| exon-exon | SLC30A9 | 4 | + | MCM7 | 7 | - |
| intron-exon | SLC31A1 | 9 | + | CDC26 | 9 | + |
| exon-exon | SLC31A2 | 9 | + | FKBP15 | 9 | + |
| intron-exon | SLC34A1 | 5 | + | GRK6 | 5 | + |
| intron-exon | SLC34A1 | 5 | + | GRK6 | 5 | + |
| exon-exon | SLC34A2 | 4 | + | ROS1 | 6 | - |
| exon-intron | SLC34A2 | 4 | + | LOC105378486 | 10 | + |
| exon-exon | SLC35A4 | 5 | - | APBB3 | 5 | - |
| exon-exon | SLC35E2A | 1 | - | SLC35E2B | 1 | - |
| exon-exon | SLC35E2A | 1 | - | SLC35E2B | 1 | - |
| intron-exon | SLC35E2A | 1 | - | SLC35E2B | 1 | - |
| exon-exon | SLC35E2B | 1 | + | SLC35E2A | 1 | + |
| intron-exon | SLC35E2B | 1 | - | NDUFA12 | 12 | - |
| exon-intron | SLC35F4 | 14 | + | LOC105370519 | 14 | + |
| exon-exon | SLC35F4 | 14 | + | LOC105370518 | 14 | + |
| exon-intron | SLC37A1 | 21 | - | RSPH1 | 21 | - |
| exon-intron | SLC38A7 | 16 | - | CNOT1 | 16 | - |
| exon-exon | SLC39A1 | 1 | - | CRTC2 | 1 | - |
| exon-exon | SLC39A3 | 19 | - | DIRAS1 | 19 | - |
| exon-exon | SLC39A6 | 18 | + | ELP2 | 18 | + |
| exon-intron | SLC39A7 | 6 | + | HSD17B8 | 6 | + |
| intron-exon | SLC39A9 | 14 | - | ERH | 14 | - |
| exon-intron | SLC3A2 | 11 | + | LOC107984521 | 12 | + |
| intron-exon | SLC43A2 | 17 | + | TLCD2 | 17 | + |
| exon-exon | SLC43A3 | 11 | - | PRG2 | 11 | - |
| exon-exon | SLC44A4 | 6 | - | NEU1 | 6 | - |
| exon-exon | SLC44A5 | 1 | + | ACADM | 1 | + |
| exon-exon | SLC46A1 | 17 | - | SARM1 | 17 | - |
| exon-intron | SLC48A1 | 12 | + | HDAC7 | 12 | + |
| exon-intron | SLC48A1 | 12 | + | LOC105370104 | 13 | + |
| exon-exon | SLC48A1 | 12 | - | RAPGEF3 | 12 | - |
| exon-exon | SLC48A1 | 12 | - | RAPGEF3 | 12 | - |
| intron-exon | SLC48A1 | 12 | - | RAPGEF3 | 12 | - |
| exon-intron | SLC49A4 | 3 | - | RN7SL5P | 9 | + |
| exon-exon | SLC4A10 | 2 | - | TBR1 | 2 | - |
| exon-exon | SLC4A10 | 2 | - | TBR1 | 2 | - |
| exon-exon | SLC4A10 | 2 | - | TBR1 | 2 | - |
| exon-exon | SLC4A1AP | 2 | - | SUPT7L | 2 | - |
| exon-intron | SLC4A4 | 4 | - | PIGU | 20 | - |
| exon-exon | SLC4A7 | 3 | + | SLC4A7 | 3 | - |
| exon-exon | SLC4A7 | 3 | + | SLC4A7 | 3 | - |
| exon-exon | SLC4A8 | 12 | + | LMBRD1 | 6 | - |
| exon-exon | SLC51A | 3 | + | LOC105374304 | 3 | + |
| exon-intron | SLC5A1 | 22 | + | LOC105373000 | 22 | + |
| intron-exon | SLC5A10 | 17 | + | FGG | 4 | - |
| intron-exon | SLC5A10 | 17 | + | FGG | 4 | - |
| intron-exon | SLC5A10 | 17 | + | FGG | 4 | - |
| exon-intron | SLC5A11 | 16 | + | HMGB1P5 | 3 | + |
| exon-intron | SLC7A14 | 3 | + | SLC7A14-AS1 | 3 | + |
| exon-exon | SLC7A5P2 | 16 | - | SMG1P3 | 16 | - |
| exon-intron | SLC7A5P2 | 16 | - | SMG1P3 | 16 | - |
| exon-exon | SLC7A5P2 | 16 | - | SMG1P3 | 16 | - |
| exon-intron | SLC7A5P2 | 16 | - | SMG1P3 | 16 | - |
| exon-exon | SLC7A5P2 | 16 | - | SMG1P3 | 16 | - |
| exon-intron | SLC7A5P2 | 16 | - | SMG1P1 | 16 | + |
| exon-exon | SLC7A5P2 | 16 | - | SMG1P3 | 16 | - |
| exon-intron | SLC7A6OS | 16 | - | SLC7A6 | 16 | - |
| exon-exon | SLC9A3R1 | 17 | - | LOC105371893 | 17 | - |
| exon-intron | SLC9A8 | 20 | + | MIR3681HG | 2 | - |
| exon-exon | SLC9B2 | 4 | + | BDH2 | 4 | + |
| exon-exon | SLC9B2 | 4 | - | SLC9B1 | 4 | - |
| exon-intron | SLC9B2 | 4 | - | SLC9B1 | 4 | - |
| exon-exon | SLC9B2 | 4 | - | SLC9B1 | 4 | - |
| exon-intron | SLCO1B1 | 12 | - | AC022335.1 | 12 | - |
| exon-intron | SLCO1B1 | 12 | - | AC022335.1 | 12 | - |
| exon-intron | SLCO1B1 | 12 | - | AC022335.1 | 12 | - |
| exon-exon | SLCO1B3 | 12 | + | SLCO1B7 | 12 | + |
| exon-intron | SLCO1B3-SLCO1B7 | 12 | + | AC022335.1 | 12 | + |
| exon-intron | SLCO1B3-SLCO1B7 | 12 | + | AC022335.1 | 12 | + |
| exon-intron | SLCO1B3-SLCO1B7 | 12 | + | AC022335.1 | 12 | + |
| exon-intron | SLCO1B3-SLCO1B7 | 12 | + | AC022335.1 | 12 | + |
| exon-intron | SLCO1B3-SLCO1B7 | 12 | + | AC022335.1 | 12 | + |
| exon-intron | SLCO6A1 | 5 | + | AC094108.1 | 5 | + |
| intron-exon | SLFN12 | 17 | + | DTWD2 | 5 | - |
| exon-intron | SLIRP | 14 | + | SNW1 | 14 | + |
| exon-intron | SLIRP | 14 | + | C14orf178 | 14 | + |
| exon-intron | SLIRP | 14 | + | SNW1 | 14 | + |
| exon-intron | SLIRP | 14 | + | SNW1 | 14 | + |
| exon-intron | SLIRP | 14 | + | SNW1 | 14 | + |
| exon-intron | SLIRP | 14 | + | LOC105373182 | X | + |
| exon-exon | SLIT1 | 10 | + | ARHGAP19 | 10 | + |
| exon-intron | SLIT1 | 10 | + | LOC105378447 | 10 | + |
| exon-intron | SLIT3 | 5 | + | SLIT3-AS2 | 5 | + |
| intron-exon | SLIT3 | 5 | + | SLIT3-AS1 | 5 | + |
| intron-exon | SLIT3 | 5 | - | MAGED2 | X | + |
| exon-intron | SLMAP | 3 | - | LOC105377103 | 3 | - |
| exon-exon | SLMAP | 3 | - | NDFIP1 | 5 | + |
| exon-exon | SLPI | 20 | - | LOC105372630 | 20 | - |
| exon-exon | SLPI | 20 | - | LOC105372630 | 20 | - |
| exon-exon | SLPI | 20 | - | LOC105372630 | 20 | - |
| exon-intron | SLPI | 20 | - | LOC105372630 | 20 | - |
| exon-intron | SLPI | 20 | - | LOC105372630 | 20 | - |
| exon-exon | SLTM | 15 | + | ADM | 11 | - |
| exon-intron | SLTM | 15 | + | ATP6V1G2-DDX39B | 6 | - |
| exon-exon | SLU7 | 5 | - | EIF3C | 16 | + |
| exon-exon | SLX1A | 16 | + | SULT1A3 | 16 | + |
| intron-exon | SLX1A-SULT1A3 | 16 | - | BOLA2-SMG1P6 | 16 | - |
| intron-exon | SLX1A-SULT1A3 | 16 | - | BOLA2-SMG1P6 | 16 | - |
| intron-exon | SLX1B-SULT1A4 | 16 | - | SLX1A | 16 | - |
| intron-exon | SLX1B-SULT1A4 | 16 | - | BOLA2-SMG1P6 | 16 | - |
| intron-exon | SLX1B-SULT1A4 | 16 | - | SLX1A | 16 | - |
| intron-exon | SLX1B-SULT1A4 | 16 | - | SLX1A | 16 | - |
| intron-exon | SLX1B-SULT1A4 | 16 | - | BOLA2-SMG1P6 | 16 | - |
| intron-exon | SLX1B-SULT1A4 | 16 | - | BOLA2-SMG1P6 | 16 | - |
| intron-exon | SLX1B-SULT1A4 | 16 | - | BOLA2-SMG1P6 | 16 | - |
| intron-exon | SLX1B-SULT1A4 | 16 | - | BOLA2-SMG1P6 | 16 | - |
| exon-exon | SMAD3 | 15 | + | SMAD3 | 15 | - |
| exon-exon | SMAP2 | 1 | - | CCT7 | 2 | + |
| exon-intron | SMARCA4 | 19 | + | ANKDD1A | 15 | - |
| intron-exon | SMARCA4 | 19 | - | CYTH2 | 19 | + |
| exon-intron | SMARCA5 | 4 | + | LINC02343 | 13 | + |
| exon-exon | SMARCC2 | 12 | - | MYL6 | 12 | - |
| exon-exon | SMARCC2 | 12 | - | MYL6 | 12 | - |
| exon-exon | SMARCC2 | 12 | - | MYL6 | 12 | - |
| exon-exon | SMARCC2 | 12 | - | MYL6 | 12 | - |
| exon-exon | SMC1A | X | - | SEC31A | 4 | - |
| exon-intron | SMC2 | 9 | + | CNBD2 | 20 | - |
| exon-exon | SMC3 | 10 | + | SMC3P1 | 2 | + |
| exon-intron | SMC5 | 9 | - | HDGFL2 | 19 | - |
| exon-exon | SMC6 | 2 | + | GEN1 | 2 | + |
| exon-exon | SMG1 | 16 | - | CHP1 | 15 | + |
| intron-exon | SMG1 | 16 | - | MRPS18B | 6 | + |
| exon-intron | SMG1P1 | 16 | + | NPIPB5 | 16 | + |
| exon-exon | SMG1P1 | 16 | + | SMG1 | 16 | - |
| exon-exon | SMG1P2 | 16 | + | BOLA2B | 16 | + |
| intron-exon | SMG1P2 | 16 | - | NPIPB12 | 16 | - |
| exon-intron | SMG1P2 | 16 | - | SMG1P6 | 16 | - |
| intron-exon | SMG1P2 | 16 | - | SLC7A5 | 16 | - |
| exon-exon | SMG1P3 | 16 | - | NPIPB3 | 16 | - |
| intron-exon | SMG1P3 | 16 | - | LOC100190986 | 16 | - |
| intron-exon | SMG1P4 | 16 | - | ARL11 | 13 | + |
| exon-exon | SMG1P5 | 16 | + | RANBP10 | 16 | - |
| intron-exon | SMG5 | 1 | + | TMEM79 | 1 | + |
| intron-exon | SMIM11A | 21 | - | TMEM234 | 1 | - |
| exon-intron | SMIM12 | 1 | - | LOC105378642 | 1 | - |
| exon-intron | SMIM15 | 5 | - | OR3A2 | 17 | - |
| exon-exon | SMIM15-AS1 | 5 | - | SMIM15 | 5 | - |
| exon-exon | SMIM15-AS1 | 5 | - | SMIM15 | 5 | - |
| exon-exon | SMIM15-AS1 | 5 | - | SMIM15 | 5 | - |
| exon-exon | SMIM15-AS1 | 5 | - | SMIM15 | 5 | - |
| exon-exon | SMIM15-AS1 | 5 | - | SMIM15 | 5 | - |
| exon-exon | SMIM15-AS1 | 5 | - | SMIM15 | 5 | - |
| exon-exon | SMIM15-AS1 | 5 | - | SMIM15 | 5 | - |
| exon-exon | SMIM19 | 8 | - | SLC20A2 | 8 | - |
| exon-intron | SMIM2 | 13 | - | LINC00390 | 13 | - |
| intron-exon | SMIM21 | 18 | - | LOC105372200 | 18 | - |
| intron-exon | SMIM27 | 9 | + | NDUFB6 | 9 | + |
| intron-exon | SMIM27 | 9 | - | NDUFB6 | 9 | - |
| exon-exon | SMIM35 | 11 | - | IL10RA | 11 | - |
| exon-exon | SMIM35 | 11 | - | IL10RA | 11 | - |
| exon-intron | SMIM4 | 3 | + | PBRM1 | 3 | + |
| exon-intron | SMIM4 | 3 | - | COL4A1 | 13 | + |
| exon-intron | SMIM4 | 3 | - | NT5DC2 | 3 | - |
| exon-intron | SMIM4 | 3 | - | NT5DC2 | 3 | - |
| exon-exon | SMIM4 | 3 | - | NT5DC2 | 3 | - |
| intron-exon | SMIM40 | 6 | - | DAXX | 6 | - |
| intron-exon | SMIM7 | 19 | - | MED26 | 19 | - |
| intron-exon | SMIM7 | 19 | - | MED26 | 19 | - |
| exon-intron | SMIM7 | 19 | - | AC008764.4 | 19 | - |
| exon-exon | SMIM7 | 19 | - | MED26 | 19 | - |
| exon-exon | SMIM7 | 19 | - | MED26 | 19 | - |
| exon-exon | SMIM7 | 19 | - | MED26 | 19 | - |
| exon-intron | SMIM7 | 19 | - | MED26 | 19 | - |
| exon-intron | SMIM7 | 19 | - | MED26 | 19 | - |
| exon-exon | SMIM7 | 19 | - | MED26 | 19 | - |
| intron-exon | SMOC1 | 14 | + | GALNT2 | 1 | + |
| intron-exon | SMPD4 | 2 | + | MZT2B | 2 | + |
| exon-exon | SMPD4 | 2 | - | MDH1 | 2 | + |
| exon-exon | SMR3B | 4 | - | WASF2 | 1 | - |
| exon-exon | SMS | X | + | LOC646347 | 1 | + |
| exon-exon | SMS | X | - | LOC646347 | 1 | - |
| exon-exon | SMS | X | - | LOC646347 | 1 | - |
| intron-exon | SMURF1 | 7 | + | LOC388572 | 11 | - |
| intron-exon | SMURF1 | 7 | - | TCL6 | 14 | - |
| intron-exon | SMURF2 | 17 | + | LOC107985000 | 17 | + |
| exon-intron | SMURF2 | 17 | - | AKAP13 | 15 | - |
| intron-exon | SMURF2P1 | 17 | + | LRRC37BP1 | 17 | + |
| exon-exon | SMURF2P1-LRRC37BP1 | 17 | + | SMURF2P1-LRRC37BP1 | 17 | + |
| exon-exon | SMURF2P1-LRRC37BP1 | 17 | + | SMURF2P1-LRRC37BP1 | 17 | + |
| exon-exon | SMURF2P1-LRRC37BP1 | 17 | + | LOC105371723 | 17 | + |
| exon-exon | SMURF2P1-LRRC37BP1 | 17 | + | SMURF2P1-LRRC37BP1 | 17 | + |
| exon-exon | SMURF2P1-LRRC37BP1 | 17 | + | SMURF2P1-LRRC37BP1 | 17 | + |
| exon-exon | SMURF2P1-LRRC37BP1 | 17 | - | SMURF2P1-LRRC37BP1 | 17 | - |
| exon-intron | SMYD3 | 1 | + | LOC105373269 | 1 | + |
| exon-intron | SMYD3 | 1 | + | LOC105373269 | 1 | + |
| exon-intron | SMYD3 | 1 | + | LOC105373269 | 1 | + |
| exon-exon | SMYD4 | 17 | + | RPA1 | 17 | + |
| exon-intron | SNAP23 | 15 | - | CAPN3 | 15 | - |
| exon-exon | SNAP25 | 20 | + | PAK5 | 20 | - |
| intron-exon | SNAP29 | 22 | - | PI4KA | 22 | - |
| intron-exon | SNAP29 | 22 | - | PI4KA | 22 | - |
| exon-exon | SNAP29 | 22 | - | RNF115 | 1 | + |
| intron-exon | SNAPC5 | 15 | - | MAP2K1 | 15 | - |
| intron-exon | SNAPC5 | 15 | - | MAP2K1 | 15 | - |
| exon-exon | SND1 | 7 | - | MYOG | 1 | - |
| exon-exon | SND1 | 7 | - | MYOG | 1 | - |
| exon-exon | SND1 | 7 | - | MYOG | 1 | - |
| exon-exon | SNHG10 | 14 | + | GLRX5 | 14 | + |
| exon-exon | SNHG11 | 20 | + | PARP10 | 8 | - |
| exon-exon | SNHG14 | 15 | - | SNHG14 | 15 | + |
| intron-exon | SNHG27 | 4 | + | NISCH | 3 | + |
| exon-exon | SNHG28 | 1 | - | SLAMF8 | 1 | - |
| intron-exon | SNHG28 | 1 | - | SLAMF8 | 1 | - |
| exon-intron | SNHG29 | 17 | + | LRRC75A | 17 | + |
| exon-intron | SNHG29 | 17 | + | LRRC75A | 17 | + |
| exon-intron | SNHG29 | 17 | + | LRRC75A | 17 | + |
| exon-intron | SNHG29 | 17 | + | LRRC75A | 17 | + |
| exon-exon | SNHG32 | 6 | + | SVIL | 10 | - |
| exon-exon | SNHG32 | 6 | - | CFAP97 | 4 | - |
| exon-exon | SNHG32 | 6 | - | CFAP97 | 4 | - |
| exon-exon | SNHG7 | 9 | - | DIPK1B | 9 | - |
| exon-exon | SNHG7 | 9 | - | DIPK1B | 9 | - |
| exon-exon | SNORD3B-2 | 17 | - | SNORD3B-2 | 17 | + |
| exon-exon | SNRNP27 | 2 | + | MXD1 | 2 | + |
| intron-exon | SNRNP70 | 19 | + | HDAC10 | 22 | - |
| exon-intron | SNRPD3 | 22 | + | GGT1 | 22 | + |
| exon-exon | SNRPF | 12 | + | CCDC38 | 12 | + |
| exon-intron | SNRPF | 12 | + | ARPC1A | 7 | - |
| exon-exon | SNTB2 | 16 | + | VPS4A | 16 | + |
| exon-intron | SNTB2 | 16 | + | LOC105372649 | 20 | - |
| intron-exon | SNTG1 | 8 | + | CHN1 | 2 | - |
| exon-exon | SNUPN | 15 | - | PTPN9 | 15 | - |
| exon-intron | SNUPN | 15 | - | AC105036.3 | 15 | - |
| exon-exon | SNUPN | 15 | - | PTPN9 | 15 | - |
| exon-exon | SNUPN | 15 | - | PTPN9 | 15 | - |
| intron-exon | SNW1 | 14 | - | SLIRP | 14 | - |
| intron-exon | SNW1 | 14 | - | SLIRP | 14 | - |
| exon-exon | SNX1 | 15 | - | SNX1 | 15 | + |
| exon-intron | SNX2 | 5 | + | LOC105379154 | 5 | + |
| exon-exon | SNX21 | 20 | + | ACOT8 | 20 | + |
| exon-intron | SNX24 | 5 | + | PPIC | 5 | + |
| intron-exon | SNX25 | 4 | - | CFAP97 | 4 | - |
| intron-exon | SNX25 | 4 | - | CFAP97 | 4 | - |
| exon-exon | SNX27 | 1 | + | CELF3 | 1 | + |
| exon-exon | SNX33 | 15 | - | IMP3 | 15 | - |
| intron-exon | SNX4 | 3 | + | LOC107987206 | 14 | + |
| intron-exon | SNX6 | 14 | + | RN7SL4P | 3 | + |
| exon-intron | SOCS1 | 16 | - | LOC105371082 | 16 | - |
| exon-intron | SOCS2 | 12 | - | SOCS2-AS1 | 12 | - |
| exon-intron | SOCS2 | 12 | - | SOCS2-AS1 | 12 | - |
| exon-exon | SOCS2 | 12 | - | SOCS2-AS1 | 12 | - |
| exon-exon | SOCS2 | 12 | - | SOCS2-AS1 | 12 | - |
| exon-intron | SOCS2 | 12 | - | SOCS2-AS1 | 12 | - |
| exon-exon | SOCS2 | 12 | - | SOCS2-AS1 | 12 | - |
| exon-intron | SOD1 | 21 | + | RXFP2 | 13 | - |
| exon-exon | SOD1 | 21 | - | PIGR | 1 | - |
| exon-intron | SOD2 | 6 | + | CLDN7 | 17 | + |
| exon-exon | SOD2 | 6 | + | WTAP | 6 | + |
| intron-exon | SOD2 | 6 | + | WTAP | 6 | + |
| exon-exon | SOD2 | 6 | + | ACAT2 | 6 | + |
| exon-exon | SOD2-OT1 | 6 | - | SOD2 | 6 | - |
| exon-exon | SON | 21 | + | RPL12 | 9 | - |
| exon-exon | SON | 21 | + | DONSON | 21 | + |
| intron-exon | SON | 21 | - | GART | 21 | - |
| intron-exon | SORBS3 | 8 | + | NEURL4 | 17 | - |
| exon-intron | SORBS3 | 8 | + | CNTNAP4 | 16 | + |
| exon-exon | SORD2P | 15 | - | SORD2P | 15 | + |
| exon-intron | SOS1 | 2 | - | ZC3HAV1 | 7 | + |
| intron-exon | SOX2-OT | 3 | + | TMIE | 3 | + |
| intron-exon | SOX2-OT | 3 | + | SNX29 | 16 | + |
| exon-exon | SOX4 | 6 | - | C2CD3 | 11 | + |
| intron-exon | SOX6 | 11 | + | LOC105376572 | 11 | + |
| exon-exon | SOX9-AS1 | 17 | + | LINC02097 | 17 | + |
| exon-exon | SOX9-AS1 | 17 | + | LINC02097 | 17 | + |
| exon-intron | SP110 | 2 | + | SP140 | 2 | + |
| exon-intron | SP140 | 2 | + | AC009949.1 | 2 | + |
| intron-exon | SP2-AS1 | 17 | - | SP2 | 17 | - |
| exon-intron | SP2-AS1 | 17 | - | SP2 | 17 | - |
| exon-intron | SP3 | 2 | - | CCDC114 | 19 | - |
| exon-exon | SP3 | 2 | - | AFTPH | 2 | + |
| intron-exon | SPA17 | 11 | - | SIAE | 11 | - |
| exon-exon | SPACA6P-AS | 19 | + | SPACA6 | 19 | + |
| exon-intron | SPACA7 | 13 | + | LOC105370372 | 13 | + |
| intron-exon | SPAG17 | 1 | - | WDR3 | 1 | - |
| intron-exon | SPAG17 | 1 | - | WDR3 | 1 | - |
| intron-exon | SPAG17 | 1 | - | WDR3 | 1 | - |
| exon-exon | SPAG5 | 17 | + | SPAG5 | 17 | - |
| intron-exon | SPAG8 | 9 | - | NPR2 | 9 | - |
| intron-exon | SPAG8 | 9 | - | NPR2 | 9 | - |
| intron-exon | SPAG9 | 17 | - | TSN | 2 | + |
| intron-exon | SPAG9 | 17 | - | PCYOX1L | 5 | - |
| exon-intron | SPARC | 5 | + | ROBO1 | 3 | - |
| intron-exon | SPARC | 5 | + | BCAS1 | 20 | + |
| exon-exon | SPARC | 5 | + | CLMAT3 | 5 | + |
| exon-exon | SPART | 13 | + | SNX3 | 6 | - |
| intron-exon | SPATA13 | 13 | + | BRK1 | 3 | - |
| exon-exon | SPATA21 | 1 | - | SZRD1 | 1 | - |
| exon-exon | SPATA21 | 1 | - | SZRD1 | 1 | - |
| exon-exon | SPATA21 | 1 | - | SZRD1 | 1 | - |
| intron-exon | SPATA21 | 1 | - | SZRD1 | 1 | - |
| intron-exon | SPATA22 | 17 | + | TRPV3 | 17 | + |
| exon-exon | SPATA7 | 14 | + | PTPN21 | 14 | + |
| exon-exon | SPATA8 | 15 | - | PDE3B | 11 | - |
| intron-exon | SPATA9 | 5 | + | RHOBTB3 | 5 | + |
| intron-exon | SPATC1 | 8 | - | PARP10 | 8 | - |
| intron-exon | SPATC1 | 8 | - | PARP10 | 8 | - |
| exon-intron | SPATC1L | 21 | + | LOC102724084 | 16 | - |
| intron-exon | SPATS2 | 12 | + | STAG3L5P-PVRIG2P-PILRB | 7 | + |
| intron-exon | SPC25 | 2 | - | NOSTRIN | 2 | - |
| exon-intron | SPCS1 | 3 | + | UBAC2 | 13 | - |
| intron-exon | SPCS1 | 3 | - | GLT8D1 | 3 | - |
| exon-intron | SPCS2P1 | 15 | - | AC068724.3 | 15 | - |
| exon-exon | SPDL1 | 5 | + | CDKL2 | 4 | - |
| exon-intron | SPDYE10P | 7 | - | DTX2P1-UPK3BP1-PMS2P11 | 7 | - |
| exon-intron | SPDYE10P | 7 | - | PMS2P6 | 7 | - |
| exon-intron | SPDYE10P | 7 | - | PMS2P6 | 7 | - |
| exon-intron | SPDYE10P | 7 | - | PMS2P6 | 7 | - |
| exon-intron | SPDYE10P | 7 | - | PMS2P7 | 7 | - |
| exon-intron | SPDYE10P | 7 | - | PMS2P6 | 7 | - |
| exon-intron | SPDYE12P | 7 | - | PMS2P6 | 7 | - |
| exon-intron | SPDYE12P | 7 | - | AC211476.3 | 7 | - |
| exon-intron | SPDYE14 | 7 | + | AC211486.3 | 7 | + |
| exon-exon | SPDYE14 | 7 | + | PMS2P7 | 7 | - |
| intron-exon | SPDYE15 | 7 | + | HMGB1 | 13 | - |
| exon-intron | SPDYE16 | 7 | - | POR | 7 | + |
| exon-intron | SPDYE3 | 7 | + | AC211476.3 | 7 | - |
| exon-intron | SPDYE3 | 7 | + | AC211476.4 | 7 | - |
| exon-intron | SPDYE3 | 7 | + | AC211486.3 | 7 | + |
| exon-exon | SPDYE3 | 7 | + | PMS2P1 | 7 | + |
| exon-intron | SPDYE3 | 7 | + | PMS2P10 | 7 | + |
| exon-intron | SPDYE3 | 7 | + | PMS2P6 | 7 | - |
| exon-exon | SPDYE8 | 7 | - | DTX2P1-UPK3BP1-PMS2P11 | 7 | - |
| intron-exon | SPDYE9 | 7 | + | SPDYE11 | 7 | + |
| exon-intron | SPDYE9 | 7 | - | AC211476.4 | 7 | - |
| exon-intron | SPDYE9 | 7 | - | PMS2P6 | 7 | - |
| exon-intron | SPDYE9 | 7 | - | AC211476.4 | 7 | - |
| exon-intron | SPECC1 | 17 | + | MAP2K3 | 17 | + |
| exon-intron | SPEG | 2 | + | ASIC4-AS1 | 2 | + |
| exon-intron | SPEN | 1 | + | ZBTB17 | 1 | + |
| exon-intron | SPEN | 1 | - | LINC02613 | 2 | + |
| exon-exon | SPG11 | 15 | - | EIF3J | 15 | - |
| exon-exon | SPG11 | 15 | - | EIF3J | 15 | - |
| exon-exon | SPHAR | 1 | - | RAB4A | 1 | - |
| intron-exon | SPHK1 | 17 | - | PRPSAP1 | 17 | - |
| exon-exon | SPHK2 | 19 | - | RPL18 | 19 | - |
| intron-exon | SPI1 | 11 | + | SLC39A13 | 11 | + |
| intron-exon | SPI1 | 11 | - | SLC39A13 | 11 | - |
| intron-exon | SPIN1 | 9 | - | RNF6 | 13 | - |
| exon-exon | SPINDOC | 11 | - | SPINDOC | 11 | + |
| exon-intron | SPINK13 | 5 | + | LOC102546294 | 5 | + |
| intron-exon | SPINK4 | 9 | + | BAG1 | 9 | + |
| exon-exon | SPINT2 | 19 | + | C19orf33 | 19 | + |
| intron-exon | SPOCK1 | 5 | + | TCTN3 | 10 | - |
| exon-exon | SPOCK1 | 5 | + | KLHL3 | 5 | + |
| exon-exon | SPOUT1 | 9 | - | ENDOG | 9 | - |
| exon-exon | SPOUT1 | 9 | - | ENDOG | 9 | - |
| exon-exon | SPOUT1 | 9 | - | ENDOG | 9 | - |
| exon-exon | SPOUT1 | 9 | - | ENDOG | 9 | - |
| exon-exon | SPOUT1 | 9 | - | ENDOG | 9 | - |
| exon-exon | SPOUT1 | 9 | - | ENDOG | 9 | - |
| exon-exon | SPOUT1 | 9 | - | ENDOG | 9 | - |
| intron-exon | SPPL3 | 12 | + | COX20 | 1 | - |
| exon-exon | SPR | 2 | - | RNASE1 | 14 | - |
| exon-intron | SPRED1 | 15 | + | CHP1 | 15 | - |
| exon-exon | SPRNP1 | 10 | - | SPRN | 10 | - |
| exon-exon | SPRR1A | 1 | + | SPRR1B | 1 | + |
| intron-exon | SPRY3 | X | - | TMLHE | X | - |
| intron-exon | SPRY3 | X | - | TMLHE | X | - |
| intron-exon | SPRY3 | X | - | TMLHE | X | - |
| intron-exon | SPRY4-AS1 | 5 | - | SPRY4 | 5 | - |
| exon-intron | SPRYD4 | 12 | + | GLS2 | 12 | + |
| exon-exon | SPRYD4 | 12 | - | MIP | 12 | - |
| intron-exon | SPTB | 14 | + | DLAT | 11 | + |
| exon-exon | SPTB | 14 | - | PLEKHG3 | 14 | - |
| exon-intron | SPTBN1 | 2 | + | STX8 | 17 | + |
| exon-exon | SPTBN2 | 11 | - | KCTD5 | 16 | + |
| exon-exon | SPTLC2 | 14 | + | ACTB | 7 | + |
| exon-exon | SPTLC2 | 14 | - | SPTLC2 | 14 | + |
| exon-exon | SPTLC2 | 14 | - | SPTLC2 | 14 | + |
| exon-intron | SPTSSB | 3 | - | LINC00265 | 7 | - |
| exon-intron | SPX | 12 | + | GYS2 | 12 | + |
| exon-intron | SQSTM1 | 5 | + | MARCHF3 | 5 | + |
| exon-intron | SQSTM1 | 5 | + | MYO18B | 22 | - |
| exon-intron | SQSTM1 | 5 | + | NBEAP3 | 22 | + |
| exon-intron | SQSTM1 | 5 | + | SLC2A5 | 1 | + |
| exon-exon | SRCAP | 16 | + | TMEM265 | 16 | + |
| intron-exon | SRD5A3-AS1 | 4 | + | LOC105377659 | 4 | + |
| intron-exon | SRD5A3-AS1 | 4 | - | SRD5A3 | 4 | - |
| intron-exon | SRD5A3-AS1 | 4 | - | SRD5A3 | 4 | - |
| intron-exon | SRD5A3-AS1 | 4 | - | SRD5A3 | 4 | - |
| intron-exon | SRD5A3-AS1 | 4 | - | SRD5A3 | 4 | - |
| intron-exon | SRD5A3-AS1 | 4 | - | SRD5A3 | 4 | - |
| intron-exon | SRD5A3-AS1 | 4 | - | SRD5A3 | 4 | - |
| intron-exon | SRD5A3-AS1 | 4 | - | SRD5A3 | 4 | - |
| intron-exon | SRD5A3-AS1 | 4 | - | SRD5A3 | 4 | - |
| exon-exon | SREBF1 | 17 | - | RAI1 | 17 | - |
| exon-exon | SREBF2 | 22 | + | MEI1 | 22 | + |
| exon-intron | SRF | 6 | + | AC015522.1 | 8 | - |
| exon-intron | SRGAP1 | 12 | - | DOP1A | 6 | + |
| intron-exon | SRGAP3 | 3 | + | OLFM1 | 9 | + |
| intron-exon | SRI | 7 | + | SRI-AS1 | 7 | + |
| exon-exon | SRI | 7 | + | SRIP2 | X | + |
| exon-intron | SRI | 7 | + | SRI-AS1 | 7 | + |
| exon-intron | SRI | 7 | + | SRI-AS1 | 7 | + |
| exon-intron | SRI | 7 | + | SRI-AS1 | 7 | + |
| exon-exon | SRP14 | 15 | + | VEZF1 | 17 | + |
| exon-exon | SRP14 | 15 | - | OLFML1 | 11 | + |
| intron-exon | SRP19 | 5 | + | REEP5 | 5 | + |
| exon-intron | SRP9 | 1 | + | EPHX1 | 1 | + |
| exon-exon | SRP9 | 1 | + | EPHX1 | 1 | + |
| exon-exon | SRP9 | 1 | + | EPHX1 | 1 | + |
| exon-intron | SRP9 | 1 | - | TNKS2 | 10 | + |
| intron-exon | SRPK2 | 7 | - | KMT2E | 7 | - |
| intron-exon | SRPRA | 11 | - | FAM118B | 11 | - |
| intron-exon | SRPRA | 11 | - | FAM118B | 11 | - |
| intron-exon | SRPRA | 11 | - | FAM118B | 11 | - |
| intron-exon | SRPRA | 11 | - | FAM118B | 11 | - |
| intron-exon | SRPRA | 11 | - | FAM118B | 11 | - |
| exon-intron | SRPRA | 11 | - | RGL1 | 1 | - |
| exon-exon | SRPRB | 3 | + | SRPRB | 3 | - |
| exon-intron | SRPX2 | X | + | SYTL4 | X | + |
| exon-intron | SRRM1 | 1 | + | LATS2 | 13 | + |
| exon-exon | SRRM1 | 1 | - | DDX17 | 22 | + |
| exon-exon | SRRM2 | 16 | - | SRRM2-AS1 | 16 | - |
| exon-intron | SRRT | 7 | + | ANAPC7 | 12 | + |
| exon-exon | SRSF2 | 17 | + | MFSD11 | 17 | + |
| exon-exon | SRSF2 | 17 | + | MFSD11 | 17 | + |
| exon-exon | SRSF4 | 1 | + | TLE5 | 19 | - |
| exon-intron | SRSF9 | 12 | - | LOC105371024 | 15 | + |
| exon-intron | SS18 | 18 | - | SSX1 | X | + |
| exon-exon | SS18 | 18 | - | SSX2 | X | - |
| exon-exon | SS18 | 18 | - | SSX4 | X | + |
| exon-exon | SS18 | 18 | - | SSX1 | X | + |
| exon-exon | SS18 | 18 | - | SSX2 | X | - |
| exon-exon | SS18 | 18 | - | SSX1 | X | + |
| exon-exon | SS18 | 18 | - | SSX2 | X | - |
| exon-exon | SS18 | 18 | - | SSX2 | X | - |
| exon-exon | SS18 | 18 | - | SSX2B | X | + |
| exon-exon | SS18 | 18 | - | SSX4 | X | + |
| exon-exon | SSB | 2 | + | LOC389465 | 7 | + |
| exon-exon | SSB | 2 | + | METTL5 | 2 | + |
| exon-intron | SSB | 2 | + | ENG | 9 | - |
| exon-exon | SSB | 2 | + | METTL5 | 2 | + |
| exon-exon | SSB | 2 | - | PHOSPHO2-KLHL23 | 2 | - |
| exon-intron | SSBP1 | 7 | + | TMEM87A | 15 | - |
| exon-intron | SSH1 | 12 | + | LOC101929204 | 12 | + |
| intron-exon | SSH2 | 17 | + | EFCAB5 | 17 | + |
| intron-exon | SSMEM1 | 7 | - | TMEM209 | 7 | - |
| exon-exon | SSPN | 12 | + | LOC105369705 | 12 | + |
| exon-exon | SSPN | 12 | + | LOC105369705 | 12 | + |
| exon-intron | SSPN | 12 | + | LOC105369705 | 12 | + |
| exon-intron | SSR1 | 6 | + | LOC102724234 | 6 | + |
| exon-exon | SSR2 | 1 | + | SSR2 | 1 | - |
| exon-intron | SSR4 | X | - | IDH3G | X | - |
| exon-exon | SSR4 | X | - | IDH3G | X | - |
| exon-exon | SSR4 | X | - | IDH3G | X | - |
| exon-exon | SSR4 | X | - | IDH3G | X | - |
| exon-intron | ST13 | 22 | + | LOC105372561 | 20 | + |
| exon-exon | ST13 | 22 | + | ST13P7 | 7 | + |
| exon-exon | ST13 | 22 | - | MTREX | 5 | + |
| exon-exon | ST13P18 | X | - | ST13 | 22 | - |
| intron-exon | ST20 | 15 | - | MTHFS | 15 | - |
| exon-intron | ST20 | 15 | - | ST20-MTHFS | 15 | - |
| exon-intron | ST20 | 15 | - | ST20-MTHFS | 15 | - |
| exon-intron | ST20 | 15 | - | ST20-MTHFS | 15 | - |
| exon-intron | ST20-AS1 | 15 | - | ST20-MTHFS | 15 | - |
| exon-exon | ST20-MTHFS | 15 | + | ST20-AS1 | 15 | + |
| intron-exon | ST20-MTHFS | 15 | + | ST20-AS1 | 15 | + |
| exon-intron | ST3GAL3-AS1 | 1 | - | ST3GAL3 | 1 | - |
| exon-intron | ST3GAL6 | 3 | + | LOC105374002 | 3 | + |
| exon-exon | ST6GALNAC4 | 9 | - | ST6GALNAC6 | 9 | - |
| intron-exon | ST7 | 7 | + | SLC35A3 | 1 | + |
| exon-exon | ST7 | 7 | - | ST7-AS1 | 7 | - |
| exon-intron | ST7-AS1 | 7 | + | ST7 | 7 | + |
| exon-intron | ST7-AS2 | 7 | - | ST7 | 7 | + |
| exon-intron | ST7-AS2 | 7 | - | ST7 | 7 | + |
| intron-exon | ST7L | 1 | + | CAPZA1 | 1 | + |
| exon-exon | ST8SIA1 | 12 | - | SULT6B2P | 12 | - |
| intron-exon | ST8SIA6 | 10 | + | ST8SIA6-AS1 | 10 | + |
| exon-exon | STAG1 | 3 | - | RGS5 | 1 | - |
| intron-exon | STAG2 | X | + | ZIK1P1 | X | + |
| exon-exon | STAG3 | 7 | + | PVRIG | 7 | + |
| exon-exon | STAG3L3 | 7 | - | TRIM74 | 7 | - |
| exon-exon | STAG3L3 | 7 | - | TRIM74 | 7 | - |
| exon-intron | STAG3L5P | 7 | + | PILRB | 7 | + |
| exon-intron | STAG3L5P | 7 | + | PVRIG2P | 7 | + |
| exon-exon | STAG3L5P-PVRIG2P-PILRB | 7 | + | STAG3L5P-PVRIG2P-PILRB | 7 | + |
| exon-exon | STAG3L5P-PVRIG2P-PILRB | 7 | + | STAG3L5P-PVRIG2P-PILRB | 7 | + |
| exon-exon | STAG3L5P-PVRIG2P-PILRB | 7 | + | STAG3L5P-PVRIG2P-PILRB | 7 | + |
| exon-exon | STAG3L5P-PVRIG2P-PILRB | 7 | + | STAG3L5P-PVRIG2P-PILRB | 7 | + |
| exon-exon | STAG3L5P-PVRIG2P-PILRB | 7 | + | STAG3L5P-PVRIG2P-PILRB | 7 | + |
| exon-exon | STAG3L5P-PVRIG2P-PILRB | 7 | + | STAG3L5P-PVRIG2P-PILRB | 7 | + |
| exon-exon | STAG3L5P-PVRIG2P-PILRB | 7 | + | STAG3L5P-PVRIG2P-PILRB | 7 | + |
| exon-exon | STAG3L5P-PVRIG2P-PILRB | 7 | - | STAG3L5P-PVRIG2P-PILRB | 7 | - |
| exon-intron | STAMBPL1 | 10 | - | FBXO21 | 12 | - |
| exon-intron | STAR | 8 | - | ASH2L | 8 | - |
| exon-intron | STARD7 | 2 | - | NSMAF | 8 | - |
| exon-intron | STARD9 | 15 | + | LRRC8D | 1 | - |
| exon-exon | STAT6 | 12 | - | NAB2 | 12 | - |
| exon-exon | STAT6 | 12 | - | NAB2 | 12 | - |
| exon-exon | STAT6 | 12 | - | NAB2 | 12 | - |
| exon-intron | STAU1 | 20 | - | SBF2 | 11 | + |
| exon-exon | STAU2 | 8 | + | UBE2W | 8 | + |
| exon-exon | STAU2 | 8 | + | UBE2W | 8 | + |
| intron-exon | STAU2-AS1 | 8 | + | LOC100130134 | X | + |
| exon-intron | STEAP2 | 7 | + | PITPNC1 | 17 | - |
| intron-exon | STEAP2-AS1 | 7 | + | STEAP1 | 7 | + |
| intron-exon | STIM1-AS1 | 11 | + | STIM1 | 11 | + |
| exon-exon | STIMATE | 3 | - | MUSTN1 | 3 | - |
| exon-intron | STIMATE-MUSTN1 | 3 | - | ITIH4 | 3 | - |
| exon-intron | STIMATE-MUSTN1 | 3 | - | AC006254.1 | 3 | - |
| exon-intron | STIMATE-MUSTN1 | 3 | - | ITIH4 | 3 | - |
| exon-intron | STIMATE-MUSTN1 | 3 | - | AC006254.1 | 3 | - |
| exon-intron | STIMATE-MUSTN1 | 3 | - | AC006254.1 | 3 | - |
| exon-exon | STIMATE-MUSTN1 | 3 | - | ITIH4 | 3 | - |
| exon-exon | STIMATE-MUSTN1 | 3 | - | ITIH4 | 3 | - |
| exon-intron | STIMATE-MUSTN1 | 3 | - | ITIH4 | 3 | - |
| exon-exon | STIMATE-MUSTN1 | 3 | - | ITIH4 | 3 | - |
| exon-intron | STIMATE-MUSTN1 | 3 | - | ITIH4 | 3 | - |
| exon-intron | STIMATE-MUSTN1 | 3 | - | ITIH4 | 3 | - |
| exon-intron | STIMATE-MUSTN1 | 3 | - | ITIH4 | 3 | - |
| intron-exon | STIMATE-MUSTN1 | 3 | - | ITIH4 | 3 | - |
| intron-exon | STK16 | 2 | - | TUBA4A | 2 | - |
| exon-exon | STK19 | 6 | + | STK19B | 6 | + |
| exon-exon | STK19 | 6 | - | DXO | 6 | - |
| exon-exon | STK19 | 6 | - | DXO | 6 | - |
| exon-exon | STK19 | 6 | - | DXO | 6 | - |
| exon-intron | STK19 | 6 | - | DXO | 6 | - |
| exon-intron | STK19 | 6 | - | DXO | 6 | - |
| exon-exon | STK19 | 6 | - | DXO | 6 | - |
| exon-exon | STK19 | 6 | - | DXO | 6 | - |
| exon-exon | STK19 | 6 | - | DXO | 6 | - |
| intron-exon | STK19 | 6 | - | DXO | 6 | - |
| exon-exon | STK19B | 6 | - | STK19 | 6 | - |
| exon-exon | STK24-AS1 | 13 | - | STK24 | 13 | - |
| exon-exon | STK25 | 2 | - | FARP2 | 2 | - |
| exon-exon | STK25 | 2 | - | FARP2 | 2 | - |
| exon-exon | STK25 | 2 | - | FARP2 | 2 | - |
| exon-exon | STK25 | 2 | - | FARP2 | 2 | - |
| exon-intron | STK38 | 6 | - | LOC102723933 | 17 | + |
| exon-exon | STK39 | 2 | + | PCNX1 | 14 | - |
| exon-exon | STMN1 | 1 | - | STMN2 | 8 | + |
| exon-exon | STMP1 | 7 | + | LOC105375521 | 7 | + |
| exon-exon | STMP1 | 7 | - | STMP1 | 7 | + |
| intron-exon | STN1 | 10 | + | SOS2 | 14 | + |
| intron-exon | STOML2 | 9 | + | PIM2 | X | - |
| exon-intron | STON1 | 2 | + | STON1-GTF2A1L | 2 | + |
| exon-exon | STON1 | 2 | + | GTF2A1L | 2 | + |
| exon-exon | STON1-GTF2A1L | 2 | + | STON1-GTF2A1L | 2 | + |
| exon-exon | STON1-GTF2A1L | 2 | + | STON1-GTF2A1L | 2 | + |
| intron-exon | STRADA | 17 | + | C10orf126 | 10 | + |
| exon-exon | STRADB | 2 | + | LOC644462 | 1 | + |
| exon-exon | STRADB | 2 | + | LOC644462 | 1 | + |
| exon-intron | STRIP2 | 7 | - | LOC105378179 | 14 | + |
| exon-exon | STRN3 | 14 | - | LOC100506071 | 14 | - |
| exon-exon | STRN3 | 14 | - | LOC100506071 | 14 | - |
| exon-exon | STRN4 | 19 | - | RAB8A | 19 | - |
| intron-exon | STS | X | - | PUDP | X | - |
| intron-exon | STS | X | - | PUDP | X | - |
| intron-exon | STS | X | - | PUDP | X | - |
| intron-exon | STS | X | - | PUDP | X | - |
| intron-exon | STS | X | - | PUDP | X | - |
| intron-exon | STS | X | - | PUDP | X | - |
| intron-exon | STS | X | - | PUDP | X | - |
| intron-exon | STS | X | - | PUDP | X | - |
| intron-exon | STS | X | - | PUDP | X | - |
| intron-exon | STS | X | - | PUDP | X | - |
| intron-exon | STS | X | - | PUDP | X | - |
| intron-exon | STS | X | - | PUDP | X | - |
| intron-exon | STT3A-AS1 | 11 | + | STT3A | 11 | + |
| exon-exon | STT3A-AS1 | 11 | - | FEZ1 | 11 | - |
| exon-intron | STT3B | 3 | + | PFKL | 21 | + |
| exon-exon | STUB1 | 16 | + | JMJD8 | 16 | + |
| exon-intron | STUB1 | 16 | + | RMI1 | 9 | - |
| exon-exon | STX16-NPEPL1 | 20 | + | RNF208 | 9 | - |
| exon-exon | STX17 | 9 | - | BIRC5 | 17 | - |
| exon-intron | STX1A | 7 | + | LOC105375350 | 7 | + |
| exon-exon | STX4 | 16 | + | LOC101928762 | 16 | + |
| exon-exon | STX6 | 1 | - | KIAA1614 | 1 | - |
| exon-intron | STX8 | 17 | - | AKAP13 | 15 | + |
| intron-exon | STXBP5 | 6 | - | FAM126A | 7 | - |
| intron-exon | STYXL1 | 7 | + | MDH2 | 7 | + |
| intron-exon | STYXL1 | 7 | + | MDH2 | 7 | + |
| intron-exon | SUCLA2 | 13 | - | ZNF134 | 19 | + |
| intron-exon | SUDS3 | 12 | + | LOC100506548 | 5 | - |
| exon-intron | SUDS3 | 12 | + | DUOX1 | 15 | + |
| exon-exon | SUFU | 10 | - | ACTR1A | 10 | - |
| exon-exon | SUGP2 | 19 | + | FBXO33 | 14 | - |
| exon-exon | SUGT1 | 13 | - | SUGT1 | 13 | + |
| exon-exon | SUGT1P1 | 9 | - | NOL6 | 9 | - |
| exon-intron | SUGT1P3 | 13 | - | TPTE2P5 | 13 | - |
| exon-intron | SUGT1P3 | 13 | - | TPTE2P5 | 13 | - |
| exon-exon | SUGT1P4-STRA6LP-CCDC180 | 9 | + | SUGT1P4-STRA6LP-CCDC180 | 9 | + |
| exon-exon | SUGT1P4-STRA6LP-CCDC180 | 9 | + | SUGT1P4-STRA6LP-CCDC180 | 9 | + |
| exon-exon | SUGT1P4-STRA6LP-CCDC180 | 9 | + | SUGT1P4-STRA6LP-CCDC180 | 9 | + |
| exon-exon | SUGT1P4-STRA6LP-CCDC180 | 9 | + | SUGT1P4-STRA6LP-CCDC180 | 9 | + |
| exon-exon | SUGT1P4-STRA6LP-CCDC180 | 9 | + | SUGT1P4-STRA6LP-CCDC180 | 9 | + |
| exon-exon | SUGT1P4-STRA6LP-CCDC180 | 9 | + | SUGT1P4-STRA6LP-CCDC180 | 9 | + |
| exon-exon | SUGT1P4-STRA6LP-CCDC180 | 9 | + | SUGT1P4-STRA6LP-CCDC180 | 9 | + |
| exon-exon | SUGT1P4-STRA6LP-CCDC180 | 9 | + | SUGT1P4-STRA6LP-CCDC180 | 9 | + |
| exon-exon | SUGT1P4-STRA6LP-CCDC180 | 9 | + | SUGT1P4-STRA6LP-CCDC180 | 9 | + |
| exon-exon | SUGT1P4-STRA6LP-CCDC180 | 9 | + | SUGT1P4-STRA6LP-CCDC180 | 9 | + |
| exon-exon | SUGT1P4-STRA6LP-CCDC180 | 9 | + | SUGT1P4-STRA6LP-CCDC180 | 9 | + |
| exon-exon | SUGT1P4-STRA6LP-CCDC180 | 9 | + | SUGT1P4-STRA6LP-CCDC180 | 9 | + |
| exon-exon | SUGT1P4-STRA6LP-CCDC180 | 9 | + | SUGT1P4-STRA6LP-CCDC180 | 9 | + |
| exon-exon | SUGT1P4-STRA6LP-CCDC180 | 9 | + | SUGT1P4-STRA6LP-CCDC180 | 9 | + |
| exon-exon | SUGT1P4-STRA6LP-CCDC180 | 9 | + | SUGT1P4-STRA6LP-CCDC180 | 9 | + |
| exon-exon | SUGT1P4-STRA6LP-CCDC180 | 9 | + | SUGT1P4-STRA6LP-CCDC180 | 9 | + |
| exon-exon | SUGT1P4-STRA6LP-CCDC180 | 9 | + | SUGT1P4-STRA6LP-CCDC180 | 9 | + |
| exon-exon | SUGT1P4-STRA6LP-CCDC180 | 9 | + | SUGT1P4-STRA6LP-CCDC180 | 9 | + |
| exon-exon | SUGT1P4-STRA6LP-CCDC180 | 9 | + | CCDC180 | 9 | + |
| exon-exon | SUGT1P4-STRA6LP-CCDC180 | 9 | - | SUGT1P4-STRA6LP-CCDC180 | 9 | - |
| exon-exon | SULF1 | 8 | - | TMED10 | 14 | - |
| exon-exon | SULF1 | 8 | - | TMED10 | 14 | - |
| exon-exon | SULF1 | 8 | - | TMED10 | 14 | - |
| exon-exon | SULF2 | 20 | - | NCOA3 | 20 | - |
| exon-exon | SULT1A1 | 16 | + | SLX1B-SULT1A4 | 16 | - |
| exon-exon | SULT1A1 | 16 | - | SULT1A2 | 16 | - |
| exon-exon | SULT1A1 | 16 | - | SULT1A2 | 16 | - |
| exon-exon | SULT2A1 | 19 | - | SERPINC1 | 1 | - |
| exon-exon | SUMO2P17 | 17 | + | LOC105371814 | 17 | + |
| exon-intron | SUMO3 | 21 | - | FBXW10 | 17 | - |
| exon-intron | SUPT20H | 13 | + | LOC105370165 | 13 | + |
| exon-intron | SUPT20H | 13 | + | LOC105370165 | 13 | + |
| exon-intron | SUPT20H | 13 | - | MPP4 | 2 | - |
| exon-intron | SUPT3H | 6 | + | RUNX2 | 6 | + |
| exon-intron | SUPT3H | 6 | + | RUNX2 | 6 | + |
| exon-exon | SUPT4H1 | 17 | - | ND1 | MT | + |
| intron-exon | SUPT7L | 2 | - | GPN1 | 2 | - |
| intron-exon | SUPT7L | 2 | - | GPN1 | 2 | - |
| exon-exon | SUPT7L | 2 | - | GPN1 | 2 | - |
| exon-intron | SURF4 | 9 | + | CUX1 | 7 | - |
| intron-exon | SUSD6 | 14 | + | BRK1 | 3 | + |
| intron-exon | SV2C | 5 | - | TMEM231 | 16 | - |
| intron-exon | SVIL | 10 | - | SVIL-AS1 | 10 | - |
| exon-intron | SVIL-AS1 | 10 | - | SH3D21 | 1 | + |
| exon-intron | SWAP70 | 11 | + | LOC102724181 | 16 | + |
| intron-exon | SWI5 | 9 | - | GOLGA2 | 9 | - |
| exon-exon | SWT1 | 1 | - | TRMT1L | 1 | - |
| intron-exon | SYBU | 8 | + | LOC105371433 | 1 | - |
| intron-exon | SYBU | 8 | + | LOC100132813 | 8 | + |
| intron-exon | SYCE2 | 19 | - | GCDH | 19 | - |
| intron-exon | SYCE2 | 19 | - | GCDH | 19 | - |
| intron-exon | SYCE2 | 19 | - | GCDH | 19 | - |
| intron-exon | SYCE2 | 19 | - | GCDH | 19 | - |
| exon-exon | SYCE2 | 19 | - | GCDH | 19 | - |
| exon-intron | SYCP2L | 6 | - | MAK | 6 | - |
| exon-exon | SYCP3 | 12 | - | CHPT1 | 12 | - |
| exon-exon | SYCP3 | 12 | - | CHPT1 | 12 | - |
| exon-exon | SYF2 | 1 | - | ZNF609 | 15 | - |
| intron-exon | SYN1 | X | + | TIMP1 | X | + |
| intron-exon | SYN1 | X | + | TIMP1 | X | + |
| intron-exon | SYN1 | X | + | TIMP1 | X | + |
| intron-exon | SYN1 | X | - | NT5C1B-RDH14 | 2 | + |
| exon-exon | SYNC | 1 | - | RBBP4 | 1 | - |
| exon-exon | SYNC | 1 | - | RBBP4 | 1 | - |
| exon-intron | SYNCRIP | 6 | - | NUP210L | 1 | + |
| exon-exon | SYNE1 | 6 | + | SYNE1-AS1 | 6 | + |
| exon-intron | SYNE2 | 14 | - | SYNE2 | 14 | + |
| intron-exon | SYNGAP1 | 6 | - | CUTA | 6 | - |
| exon-intron | SYNGR1 | 22 | + | SYNGR1 | 22 | - |
| exon-exon | SYNGR3 | 16 | - | RNA45SN3 | 21 | + |
| exon-intron | SYNJ2 | 6 | - | SNX9 | 6 | - |
| exon-exon | SYNJ2BP-COX16 | 14 | + | SYNJ2BP-COX16 | 14 | + |
| exon-exon | SYNJ2BP-COX16 | 14 | + | SYNJ2BP-COX16 | 14 | + |
| exon-exon | SYNJ2BP-COX16 | 14 | - | SYNJ2BP-COX16 | 14 | - |
| exon-exon | SYNJ2BP-COX16 | 14 | - | SYNJ2BP-COX16 | 14 | - |
| exon-exon | SYNJ2BP-COX16 | 14 | - | SYNJ2BP-COX16 | 14 | - |
| exon-exon | SYNJ2BP-COX16 | 14 | - | SYNJ2BP-COX16 | 14 | - |
| exon-exon | SYNJ2BP-COX16 | 14 | - | SYNJ2BP-COX16 | 14 | - |
| exon-exon | SYNPO | 5 | - | CUEDC1 | 17 | + |
| intron-exon | SYP-AS1 | X | - | SYP | X | - |
| intron-exon | SYP-AS1 | X | - | SYP | X | - |
| exon-exon | SYS1 | 20 | + | DBNDD2 | 20 | + |
| exon-exon | SYT17 | 16 | - | ITPRIPL2 | 16 | - |
| exon-exon | SYT17 | 16 | - | ITPRIPL2 | 16 | - |
| exon-exon | SYT2 | 1 | - | ND4 | MT | + |
| intron-exon | SYT5 | 19 | - | DNAAF3 | 19 | - |
| exon-exon | SYTL3 | 6 | + | PROSER1 | 13 | - |
| intron-exon | SYTL3 | 6 | + | EZR | 6 | + |
| exon-intron | SZT2 | 1 | + | HYI-AS1 | 1 | + |
| intron-exon | TACC1 | 8 | - | PLOD2 | 3 | - |
| exon-exon | TACC1 | 8 | - | PLXNB2 | 22 | + |
| intron-exon | TACC2 | 10 | + | BBS5 | 2 | - |
| exon-exon | TACC2 | 10 | - | MRFAP1 | 4 | - |
| exon-intron | TADA2B | 4 | - | MTFR1 | 8 | + |
| intron-exon | TADA3 | 3 | - | OGG1 | 3 | - |
| intron-exon | TADA3 | 3 | - | OGG1 | 3 | - |
| exon-exon | TAF10 | 11 | - | ILK | 11 | - |
| exon-exon | TAF10 | 11 | - | ILK | 11 | - |
| exon-exon | TAF10 | 11 | - | ILK | 11 | - |
| exon-exon | TAF10 | 11 | - | ILK | 11 | - |
| intron-exon | TAF12 | 1 | + | LINC01715 | 1 | + |
| exon-exon | TAF4 | 20 | + | TAF4 | 20 | - |
| exon-intron | TAF4 | 20 | - | MIR1257 | 20 | - |
| exon-intron | TAF4 | 20 | - | MIR1257 | 20 | - |
| intron-exon | TAF6 | 7 | - | AP4M1 | 7 | - |
| exon-exon | TAF7 | 5 | + | TAF7 | 5 | - |
| exon-intron | TAF8 | 6 | - | GUCA1A | 6 | - |
| exon-exon | TAF9 | 5 | - | AK6 | 5 | - |
| exon-exon | TAF9 | 5 | - | AK6 | 5 | - |
| exon-exon | TAF9 | 5 | - | AK6 | 5 | - |
| exon-intron | TAF9 | 5 | - | AK6 | 5 | - |
| intron-exon | TAFA1 | 3 | + | LYST | 1 | - |
| exon-intron | TAGLN | 11 | + | PCSK7 | 11 | - |
| exon-intron | TAGLN2 | 1 | - | CFAP45 | 1 | - |
| exon-exon | TAGLN2 | 1 | - | CFAP45 | 1 | - |
| exon-exon | TALAM1 | 11 | - | MALAT1 | 11 | - |
| exon-exon | TALAM1 | 11 | - | MALAT1 | 11 | - |
| exon-exon | TALAM1 | 11 | - | MALAT1 | 11 | - |
| exon-exon | TALAM1 | 11 | - | MALAT1 | 11 | - |
| exon-exon | TALAM1 | 11 | - | MALAT1 | 11 | - |
| exon-exon | TALAM1 | 11 | - | MALAT1 | 11 | - |
| exon-exon | TALAM1 | 11 | - | MALAT1 | 11 | - |
| exon-exon | TALAM1 | 11 | - | MALAT1 | 11 | + |
| exon-exon | TALAM1 | 11 | - | MALAT1 | 11 | - |
| exon-exon | TALAM1 | 11 | - | MALAT1 | 11 | - |
| exon-exon | TALAM1 | 11 | - | MALAT1 | 11 | - |
| exon-exon | TALAM1 | 11 | - | MALAT1 | 11 | - |
| exon-exon | TALAM1 | 11 | - | MALAT1 | 11 | - |
| exon-exon | TALAM1 | 11 | - | APOBEC1 | 12 | - |
| exon-exon | TALAM1 | 11 | - | MALAT1 | 11 | - |
| exon-exon | TALAM1 | 11 | - | NUP58 | 13 | - |
| exon-intron | TALAM1 | 11 | - | AMZ1 | 7 | + |
| exon-exon | TALAM1 | 11 | - | HDAC3 | 5 | - |
| exon-exon | TALAM1 | 11 | - | RBM47 | 4 | - |
| exon-exon | TALAM1 | 11 | - | COX3 | MT | - |
| exon-exon | TALAM1 | 11 | - | COX3 | MT | - |
| exon-exon | TALAM1 | 11 | - | COX3 | MT | - |
| exon-exon | TALDO1 | 11 | - | INTS8 | 8 | - |
| exon-intron | TANGO2 | 22 | + | DPM1 | 20 | + |
| intron-exon | TANGO6 | 16 | - | FST | 5 | + |
| intron-exon | TANK | 2 | + | LINC01806 | 2 | + |
| exon-intron | TAOK3 | 12 | - | CYP3A7-CYP3A51P | 7 | - |
| exon-intron | TAP2 | 6 | + | LOC107648851 | 6 | + |
| exon-intron | TAPBP | 6 | + | GGNBP1 | 6 | + |
| exon-intron | TAPBP | 6 | - | RGL2 | 6 | - |
| exon-exon | TAPBP | 6 | - | RGL2 | 6 | - |
| exon-exon | TAPBPL | 12 | - | CD27-AS1 | 12 | - |
| intron-exon | TARS2 | 1 | - | SULF2 | 20 | - |
| intron-exon | TAS1R1 | 1 | - | CLIP3 | 19 | - |
| exon-exon | TASOR | 3 | - | CCDC66 | 3 | - |
| intron-exon | TASP1 | 20 | - | SPTLC3 | 20 | - |
| intron-exon | TASP1 | 20 | - | SPTLC3 | 20 | - |
| intron-exon | TASP1 | 20 | - | SPTLC3 | 20 | - |
| exon-exon | TAT-AS1 | 16 | - | ZNF19 | 16 | - |
| exon-intron | TATDN2 | 3 | + | GHRLOS | 3 | + |
| exon-intron | TATDN3 | 1 | - | LARP4 | 12 | - |
| exon-intron | TAX1BP1-AS1 | 7 | + | TAX1BP1 | 7 | + |
| exon-exon | TBC1D15 | 12 | - | CCND1 | 11 | + |
| exon-intron | TBC1D17 | 19 | + | LGALS3 | 14 | + |
| intron-exon | TBC1D17 | 19 | - | AKT1S1 | 19 | - |
| exon-intron | TBC1D26 | 17 | + | LOC105371559 | 17 | + |
| intron-exon | TBC1D28 | 17 | - | LOC645139 | 17 | - |
| exon-intron | TBC1D2B | 15 | - | ADAMTS7P3 | 15 | - |
| exon-exon | TBC1D2B | 15 | - | YIPF1 | 1 | - |
| exon-exon | TBC1D2B | 15 | - | YIPF1 | 1 | - |
| exon-exon | TBC1D2B | 15 | - | YIPF1 | 1 | - |
| exon-exon | TBC1D2B | 15 | - | YIPF1 | 1 | - |
| exon-exon | TBC1D2B | 15 | - | YIPF1 | 1 | - |
| exon-exon | TBC1D3 | 17 | + | NPEPPSP1 | 17 | + |
| intron-exon | TBC1D3E | 17 | + | NPEPPSP1 | 17 | - |
| intron-exon | TBC1D3P1 | 17 | - | DHX40P1 | 17 | - |
| intron-exon | TBC1D3P1-DHX40P1 | 17 | - | RNFT1 | 17 | - |
| exon-exon | TBC1D3P1-DHX40P1 | 17 | - | TBC1D3P1-DHX40P1 | 17 | - |
| exon-exon | TBC1D3P1-DHX40P1 | 17 | - | TBC1D3P1-DHX40P1 | 17 | - |
| exon-exon | TBC1D3P1-DHX40P1 | 17 | - | TBC1D3P1-DHX40P1 | 17 | - |
| exon-exon | TBC1D3P1-DHX40P1 | 17 | - | TBC1D3P1-DHX40P1 | 17 | - |
| exon-exon | TBC1D7-LOC100130357 | 6 | - | TBC1D7-LOC100130357 | 6 | - |
| exon-exon | TBC1D7-LOC100130357 | 6 | - | TBC1D7-LOC100130357 | 6 | - |
| exon-exon | TBC1D7-LOC100130357 | 6 | - | TBC1D7-LOC100130357 | 6 | - |
| exon-exon | TBC1D7-LOC100130357 | 6 | - | TBC1D7-LOC100130357 | 6 | - |
| exon-exon | TBC1D7-LOC100130357 | 6 | - | TBC1D7-LOC100130357 | 6 | - |
| intron-exon | TBC1D7-LOC100130357 | 6 | - | PHACTR1 | 6 | - |
| intron-exon | TBC1D7-LOC100130357 | 6 | - | PHACTR1 | 6 | - |
| exon-exon | TBC1D7-LOC100130357 | 6 | - | TBC1D7-LOC100130357 | 6 | - |
| intron-exon | TBC1D8 | 2 | - | RPL31 | 2 | - |
| intron-exon | TBC1D8 | 2 | - | RPL31 | 2 | - |
| exon-exon | TBC1D9B | 5 | - | LOC100996419 | 5 | - |
| exon-intron | TBC1D9B | 5 | - | AL162253.2 | 9 | - |
| exon-exon | TBCB | 19 | - | POLR2I | 19 | - |
| exon-exon | TBCB | 19 | - | POLR2I | 19 | - |
| exon-exon | TBCB | 19 | - | POLR2I | 19 | - |
| exon-exon | TBCB | 19 | - | POLR2I | 19 | - |
| exon-exon | TBCB | 19 | - | POLR2I | 19 | - |
| intron-exon | TBCE | 1 | + | GNG4 | 1 | + |
| exon-intron | TBCE | 1 | + | B3GALNT2 | 1 | + |
| exon-intron | TBCE | 1 | + | B3GALNT2 | 1 | + |
| exon-intron | TBCEL | 11 | + | TECTA | 11 | + |
| exon-exon | TBL1XR1 | 3 | - | RGS17 | 6 | - |
| exon-intron | TBR1 | 2 | + | SLC4A10 | 2 | + |
| exon-intron | TBX2-AS1 | 17 | + | LOC109280161 | 17 | + |
| exon-intron | TBX2-AS1 | 17 | + | TBX2 | 17 | + |
| exon-intron | TBXAS1 | 7 | - | HIPK2 | 7 | - |
| exon-exon | TC2N | 14 | - | CATSPERB | 14 | - |
| exon-exon | TC2N | 14 | - | CATSPERB | 14 | - |
| exon-exon | TC2N | 14 | - | CATSPERB | 14 | - |
| exon-exon | TC2N | 14 | - | CATSPERB | 14 | - |
| exon-intron | TCAF1 | 7 | - | LOC112267988 | 7 | - |
| intron-exon | TCAF2 | 7 | + | LOC154761 | 7 | - |
| exon-exon | TCAF2P1 | 7 | + | LOC154761 | 7 | + |
| exon-intron | TCEAL2 | X | + | ZC3H12B | X | - |
| exon-exon | TCEAL9 | X | - | TCEAL9 | X | + |
| exon-exon | TCF19 | 6 | - | CCHCR1 | 6 | - |
| exon-exon | TCF20 | 22 | + | TCF20 | 22 | - |
| exon-exon | TCF20 | 22 | + | TCF20 | 22 | - |
| intron-exon | TCF20 | 22 | - | TNFRSF13C | 22 | - |
| exon-intron | TCF25 | 16 | - | SPG7 | 16 | - |
| exon-exon | TCF25 | 16 | - | COX1 | MT | + |
| exon-exon | TCF3 | 19 | - | PBX1 | 1 | + |
| exon-exon | TCIRG1 | 11 | + | CHKA | 11 | + |
| exon-exon | TCP1 | 6 | - | ACAT2 | 6 | - |
| exon-exon | TCP1 | 6 | - | ACAT2 | 6 | - |
| exon-exon | TCP1 | 6 | - | ACAT2 | 6 | - |
| exon-exon | TCP1 | 6 | - | ACAT2 | 6 | - |
| exon-exon | TCP1 | 6 | - | ACAT2 | 6 | - |
| exon-exon | TCP1 | 6 | - | ACAT2 | 6 | - |
| exon-exon | TCP1 | 6 | - | ACAT2 | 6 | - |
| exon-exon | TCP10L | 21 | + | CFAP298 | 21 | + |
| intron-exon | TCP11L2 | 12 | - | CKAP4 | 12 | - |
| intron-exon | TCTA | 3 | - | RHOA | 3 | - |
| intron-exon | TCTA | 3 | - | LAMC2 | 1 | - |
| exon-exon | TCTA | 3 | - | TCTA | 3 | + |
| exon-intron | TCTA | 3 | - | KDM3B | 5 | - |
| exon-intron | TCTA | 3 | - | RAB11FIP4 | 17 | - |
| exon-exon | TCTEX1D2 | 3 | + | TM4SF19-TCTEX1D2 | 3 | + |
| exon-exon | TCTEX1D2 | 3 | + | TM4SF19-TCTEX1D2 | 3 | + |
| exon-intron | TCTEX1D2 | 3 | - | PCYT1A | 3 | - |
| exon-exon | TDRD1 | 10 | - | CCDC186 | 10 | - |
| intron-exon | TDRD5 | 1 | + | TOR1AIP1 | 1 | + |
| intron-exon | TDRKH | 1 | - | OAZ3 | 1 | - |
| intron-exon | TDRKH | 1 | - | OAZ3 | 1 | - |
| intron-exon | TDRKH | 1 | - | OAZ3 | 1 | - |
| intron-exon | TDRKH | 1 | - | OAZ3 | 1 | - |
| intron-exon | TDRKH | 1 | - | OAZ3 | 1 | - |
| intron-exon | TDRKH | 1 | - | OAZ3 | 1 | - |
| intron-exon | TDRKH | 1 | - | OAZ3 | 1 | - |
| intron-exon | TDRKH | 1 | - | OAZ3 | 1 | - |
| intron-exon | TDRKH | 1 | - | OAZ3 | 1 | - |
| intron-exon | TDRKH | 1 | - | OAZ3 | 1 | - |
| intron-exon | TDRKH | 1 | - | OAZ3 | 1 | - |
| intron-exon | TDRKH | 1 | - | OAZ3 | 1 | - |
| intron-exon | TDRKH | 1 | - | OAZ3 | 1 | - |
| intron-exon | TDRKH | 1 | - | OAZ3 | 1 | - |
| intron-exon | TDRKH | 1 | - | OAZ3 | 1 | - |
| intron-exon | TDRKH | 1 | - | OAZ3 | 1 | - |
| intron-exon | TDRKH | 1 | - | OAZ3 | 1 | - |
| intron-exon | TDRKH | 1 | - | OAZ3 | 1 | - |
| intron-exon | TDRKH | 1 | - | OAZ3 | 1 | - |
| exon-exon | TEDC1 | 14 | - | CRIP1 | 14 | - |
| exon-exon | TEDC1 | 14 | - | CRIP1 | 14 | - |
| exon-exon | TEDC1 | 14 | - | CRIP1 | 14 | - |
| exon-intron | TEFM | 17 | + | ADAP2 | 17 | + |
| exon-intron | TEKT4P2 | 21 | - | CR381670.2 | 21 | - |
| intron-exon | TEN1-CDK3 | 17 | + | EVPL | 17 | + |
| exon-exon | TEN1-CDK3 | 17 | - | ACOX1 | 17 | - |
| exon-exon | TEN1-CDK3 | 17 | - | ACOX1 | 17 | - |
| exon-exon | TEN1-CDK3 | 17 | - | ACOX1 | 17 | - |
| exon-exon | TEN1-CDK3 | 17 | - | ACOX1 | 17 | - |
| exon-exon | TEN1-CDK3 | 17 | - | ACOX1 | 17 | - |
| exon-exon | TENM2 | 5 | + | ZBTB18 | 1 | + |
| exon-exon | TENT4B | 16 | - | BAZ2A | 12 | + |
| exon-exon | TEPSIN | 17 | + | LOC105371925 | 17 | + |
| exon-exon | TERF1 | 8 | - | MLEC | 12 | - |
| intron-exon | TERF2 | 16 | + | NFAT5 | 16 | + |
| exon-exon | TERF2 | 16 | - | COG8 | 16 | - |
| exon-exon | TERF2IP | 16 | + | LOC105371348 | 16 | + |
| exon-exon | TERF2IP | 16 | - | KARS1 | 16 | - |
| exon-exon | TERF2IP | 16 | - | TERF2IP | 16 | + |
| exon-intron | TES | 7 | - | GLG1 | 16 | + |
| exon-exon | TES | 7 | - | SLC12A6 | 15 | + |
| intron-exon | TET2 | 4 | + | TET2-AS1 | 4 | + |
| exon-intron | TET2 | 4 | + | PTH1R | 3 | + |
| exon-exon | TEX12 | 11 | + | BCO2 | 11 | + |
| exon-exon | TEX12 | 11 | - | SDHD | 11 | - |
| exon-exon | TEX12 | 11 | - | SDHD | 11 | - |
| exon-exon | TEX22 | 14 | + | MTA1 | 14 | + |
| intron-exon | TEX26-AS1 | 13 | + | MEDAG | 13 | + |
| exon-exon | TEX264 | 3 | - | RAD54L2 | 3 | - |
| exon-exon | TEX264 | 3 | - | RAD54L2 | 3 | - |
| exon-exon | TEX45 | 19 | + | ZNF358 | 19 | + |
| exon-exon | TF | 3 | + | SRPRB | 3 | + |
| intron-exon | TF | 3 | - | NEAT1 | 11 | + |
| exon-exon | TF | 3 | - | TF | 3 | + |
| exon-exon | TFAP2A | 6 | + | TFAP2A-AS2 | 6 | + |
| exon-exon | TFDP1 | 13 | + | LOC441488 | X | - |
| exon-intron | TFDP2 | 3 | - | CNOT1 | 16 | + |
| exon-intron | TFF1 | 21 | - | LOC105372815 | 21 | - |
| exon-intron | TFF3 | 21 | - | SHTN1 | 10 | + |
| exon-exon | TFIP11 | 22 | - | SRRD | 22 | - |
| exon-exon | TG | 8 | + | SDHAF1 | 19 | + |
| exon-intron | TG | 8 | + | PHLPP2 | 16 | + |
| exon-intron | TG | 8 | - | TG | 8 | + |
| intron-exon | TGFB1 | 19 | + | BCKDHA | 19 | + |
| intron-exon | TGFB1 | 19 | + | TMEM91 | 19 | + |
| exon-exon | TGFBR1 | 9 | + | C20orf85 | 20 | + |
| exon-exon | TGIF2 | 20 | + | RAB5IF | 20 | + |
| exon-intron | TGIF2 | 20 | + | TGIF2-RAB5IF | 20 | + |
| exon-intron | TGIF2-RAB5IF | 20 | + | SLA2 | 20 | + |
| exon-intron | TGIF2-RAB5IF | 20 | + | SLA2 | 20 | + |
| exon-exon | TGM2 | 20 | - | RPRD1B | 20 | - |
| exon-intron | TGM2 | 20 | - | SLC9A7 | X | + |
| exon-intron | TGM2 | 20 | - | LOC105376080 | 9 | - |
| exon-intron | TGM2 | 20 | - | RNR2 | MT | + |
| exon-intron | TGOLN2 | 2 | + | GTF2IRD2B | 7 | + |
| exon-exon | TGS1 | 8 | - | TGS1 | 8 | + |
| intron-exon | THADA | 2 | + | RN7SL4P | 3 | + |
| intron-exon | THAP2 | 12 | - | ZFC3H1 | 12 | - |
| exon-intron | THAP5 | 7 | - | PNPLA8 | 7 | - |
| exon-intron | THAP7-AS1 | 22 | + | P2RX6 | 22 | + |
| intron-exon | THAP9 | 4 | - | SEC31A | 4 | - |
| exon-intron | THBS1 | 15 | - | LOC107985543 | 22 | - |
| intron-exon | THBS4 | 5 | - | HDHD3 | 9 | - |
| exon-intron | THBS4-AS1 | 5 | - | THBS4 | 5 | - |
| exon-exon | THCAT158 | 17 | + | EFCAB13 | 17 | + |
| exon-exon | THCAT158 | 17 | + | EFCAB13 | 17 | + |
| intron-exon | THCAT158 | 17 | + | EFCAB13 | 17 | + |
| intron-exon | THCAT158 | 17 | - | ITGB3 | 17 | - |
| intron-exon | THNSL1 | 10 | - | PRTFDC1 | 10 | - |
| intron-exon | THNSL1 | 10 | - | PRTFDC1 | 10 | - |
| intron-exon | THNSL1 | 10 | - | PRTFDC1 | 10 | - |
| intron-exon | THNSL1 | 10 | - | PRTFDC1 | 10 | - |
| intron-exon | THNSL1 | 10 | - | PRTFDC1 | 10 | - |
| intron-exon | THNSL1 | 10 | - | PRTFDC1 | 10 | - |
| intron-exon | THNSL2 | 2 | - | RPS17 | 15 | - |
| intron-exon | THOC2 | X | + | STAG2 | X | + |
| exon-intron | THOC3-AS1 | 5 | + | LOC107986490 | 5 | - |
| intron-exon | THOC7 | 3 | + | ATXN7 | 3 | + |
| exon-intron | THOC7 | 3 | - | C3orf49 | 3 | - |
| exon-intron | THOC7 | 3 | - | C3orf49 | 3 | - |
| exon-intron | THOP1 | 19 | + | PRR14L | 22 | + |
| exon-exon | THRAP3 | 1 | + | TBC1D2B | 15 | - |
| exon-intron | THRB-AS2 | 3 | + | THRB | 3 | + |
| exon-exon | THSD1 | 13 | + | VPS36 | 13 | + |
| exon-intron | THSD4-AS1 | 15 | - | THSD4 | 15 | - |
| exon-intron | THTPA | 14 | + | LINC00378 | 13 | - |
| exon-intron | THTPA | 14 | + | LINC02441 | 12 | + |
| exon-intron | THUMPD1 | 16 | - | ADAM5 | 8 | + |
| exon-exon | THUMPD3-AS1 | 3 | - | THUMPD3 | 3 | - |
| exon-exon | TIA1 | 2 | - | C2orf42 | 2 | - |
| exon-exon | TIAL1 | 10 | + | DKK3 | 11 | - |
| intron-exon | TIAM1 | 21 | + | LOC150051 | 21 | + |
| exon-exon | TIAM2 | 6 | - | SCAF8 | 6 | - |
| exon-exon | TICRR | 15 | + | KIF7 | 15 | + |
| exon-exon | TICRR | 15 | + | KIF7 | 15 | + |
| exon-intron | TIGAR | 12 | + | CRTC3-AS1 | 15 | + |
| exon-intron | TIGD6 | 5 | + | HMGXB3 | 5 | + |
| exon-exon | TIGD6 | 5 | - | SLC26A2 | 5 | - |
| exon-exon | TIGD7 | 16 | - | ZNF263 | 16 | - |
| exon-exon | TIMM10B | 11 | + | DNHD1 | 11 | + |
| exon-exon | TIMM10B | 11 | + | DNHD1 | 11 | + |
| exon-intron | TIMM13 | 19 | + | LOC106804547 | 19 | + |
| exon-intron | TIMM13 | 19 | + | LOC106804547 | 19 | + |
| exon-intron | TIMM13 | 19 | + | LOC106804547 | 19 | + |
| exon-intron | TIMM13 | 19 | + | LOC106804547 | 19 | + |
| exon-exon | TIMM13 | 19 | - | TMPRSS9 | 19 | - |
| exon-exon | TIMM23 | 10 | - | TIMM23B | 10 | - |
| exon-exon | TIMM23B | 10 | + | AGAP6 | 10 | + |
| exon-exon | TIMM8B | 11 | - | NKAPD1 | 11 | - |
| exon-exon | TIMM8B | 11 | - | NKAPD1 | 11 | - |
| exon-exon | TIMM8B | 11 | - | NKAPD1 | 11 | - |
| exon-exon | TIMM8B | 11 | - | NKAPD1 | 11 | - |
| exon-exon | TIMM8B | 11 | - | NKAPD1 | 11 | - |
| exon-intron | TIMP1 | X | + | ABCB11 | 2 | - |
| exon-exon | TIMP2 | 17 | + | E2F3 | 6 | - |
| exon-exon | TIPARP-AS1 | 3 | + | TIPARP | 3 | + |
| intron-exon | TJP1P1 | 16 | + | TJP1 | 15 | - |
| exon-exon | TK1 | 17 | + | LOC107985050 | 17 | + |
| exon-exon | TK1 | 17 | + | LOC107985050 | 17 | + |
| exon-intron | TK1 | 17 | + | LOC107985050 | 17 | + |
| intron-exon | TK2 | 16 | - | BEAN1-AS1 | 16 | - |
| exon-intron | TKFC | 11 | - | DDB1 | 11 | - |
| exon-exon | TKFC | 11 | - | DDB1 | 11 | - |
| exon-exon | TKFC | 11 | - | DDB1 | 11 | - |
| exon-intron | TKFC | 11 | - | DDB1 | 11 | - |
| exon-intron | TKFC | 11 | - | DDB1 | 11 | - |
| exon-exon | TKFC | 11 | - | DDB1 | 11 | - |
| exon-exon | TKTL1 | X | - | TEX28 | X | - |
| exon-exon | TLCD1 | 17 | + | NEK8 | 17 | + |
| exon-exon | TLCD1 | 17 | - | RPL23A | 17 | - |
| exon-intron | TLCD1 | 17 | - | LINC02067 | 3 | + |
| exon-intron | TLCD2 | 17 | - | TBP | 6 | + |
| intron-exon | TLCD3B | 16 | - | C16orf92 | 16 | - |
| exon-exon | TLCD4-RWDD3 | 1 | + | TLCD4-RWDD3 | 1 | + |
| exon-exon | TLCD4-RWDD3 | 1 | + | RWDD3 | 1 | + |
| exon-exon | TLCD4-RWDD3 | 1 | + | RWDD3 | 1 | + |
| exon-exon | TLCD4-RWDD3 | 1 | + | RWDD3 | 1 | + |
| exon-exon | TLCD4-RWDD3 | 1 | + | RWDD3 | 1 | + |
| exon-exon | TLCD4-RWDD3 | 1 | - | TLCD4 | 1 | - |
| intron-exon | TLCD5 | 11 | - | ATP11C | X | - |
| exon-exon | TLCD5 | 11 | - | TLCD5 | 11 | + |
| exon-exon | TLE5 | 19 | + | ABL1 | 9 | - |
| exon-intron | TLE5 | 19 | - | LSAMP | 3 | - |
| exon-intron | TLE5 | 19 | - | MPHOSPH10 | 2 | + |
| exon-intron | TLE5 | 19 | - | MPHOSPH10 | 2 | + |
| exon-intron | TLR2 | 4 | + | LOC105377499 | 4 | + |
| exon-exon | TLR6 | 4 | - | TLR1 | 4 | - |
| exon-exon | TLR8 | X | + | AASS | 7 | - |
| exon-exon | TLR8 | X | + | AASS | 7 | - |
| exon-exon | TM4SF1-AS1 | 3 | - | TM4SF1 | 3 | - |
| exon-exon | TM4SF19-TCTEX1D2 | 3 | + | TM4SF19-TCTEX1D2 | 3 | + |
| exon-exon | TM4SF19-TCTEX1D2 | 3 | + | TM4SF19-AS1 | 3 | + |
| intron-exon | TM4SF19-TCTEX1D2 | 3 | - | TCTEX1D2 | 3 | - |
| exon-exon | TM7SF3 | 12 | - | FGFR1OP2 | 12 | - |
| exon-exon | TM7SF3 | 12 | - | FGFR1OP2 | 12 | - |
| exon-exon | TM7SF3 | 12 | - | FGFR1OP2 | 12 | - |
| exon-exon | TM7SF3 | 12 | - | FGFR1OP2 | 12 | - |
| intron-exon | TM9SF2 | 13 | - | SPIDR | 8 | - |
| exon-exon | TM9SF4 | 20 | - | CALD1 | 7 | - |
| exon-exon | TMBIM4 | 12 | - | LLPH | 12 | - |
| exon-exon | TMBIM6 | 12 | - | TMBIM6 | 12 | + |
| exon-intron | TMBIM6 | 12 | - | PKD2L1 | 10 | + |
| intron-exon | TMC2 | 20 | + | TUBA1A | 12 | - |
| exon-intron | TMC4 | 19 | + | LOC112268246 | 19 | + |
| exon-exon | TMCO3 | 13 | - | MPDU1 | 17 | - |
| exon-intron | TMCO5A | 15 | + | LINC02345 | 15 | + |
| exon-exon | TMCO6 | 5 | + | ZNF800 | 7 | - |
| exon-exon | TMCO6 | 5 | + | IK | 5 | + |
| exon-exon | TMED10 | 14 | + | IL6 | 7 | - |
| exon-intron | TMED10 | 14 | + | AL691403.1 | 14 | + |
| exon-exon | TMED2 | 12 | + | TMED2 | 12 | - |
| exon-intron | TMED2 | 12 | + | CMTM4 | 16 | - |
| exon-intron | TMED2 | 12 | + | CMTM4 | 16 | - |
| exon-intron | TMED2 | 12 | + | TTC28 | 22 | - |
| exon-intron | TMED4 | 7 | - | LINC01376 | 2 | - |
| exon-intron | TMED4 | 7 | - | NPC1L1 | 7 | - |
| exon-exon | TMED6 | 16 | - | COG8 | 16 | - |
| exon-intron | TMED6 | 16 | - | COG8 | 16 | - |
| exon-exon | TMED6 | 16 | - | COG8 | 16 | - |
| exon-exon | TMED7 | 5 | - | TICAM2 | 5 | - |
| exon-exon | TMED7 | 5 | - | TICAM2 | 5 | - |
| exon-exon | TMED7 | 5 | - | TMED7-TICAM2 | 5 | - |
| exon-exon | TMED7-TICAM2 | 5 | - | TMED7-TICAM2 | 5 | - |
| exon-exon | TMED7-TICAM2 | 5 | - | TMED7-TICAM2 | 5 | - |
| exon-exon | TMEM106A | 17 | + | CCDC200 | 17 | + |
| exon-intron | TMEM106A | 17 | - | AC136431.1 | 16 | - |
| intron-exon | TMEM107 | 17 | + | LOC105371520 | 17 | + |
| exon-intron | TMEM107 | 17 | + | LOC105371520 | 17 | + |
| exon-exon | TMEM128 | 4 | - | LOC105371175 | 1 | + |
| exon-exon | TMEM131 | 2 | + | TMEM131 | 2 | - |
| exon-intron | TMEM131 | 2 | + | LOC107985921 | 2 | + |
| intron-exon | TMEM132A | 11 | + | SLC15A3 | 11 | + |
| intron-exon | TMEM132D | 12 | + | TMEM132D-AS1 | 12 | + |
| exon-intron | TMEM134 | 11 | + | AIP | 11 | + |
| exon-intron | TMEM134 | 11 | + | AIP | 11 | + |
| exon-exon | TMEM138 | 11 | + | DTNB | 2 | - |
| exon-exon | TMEM139-AS1 | 7 | + | TMEM139 | 7 | + |
| intron-exon | TMEM147-AS1 | 19 | + | TMEM147 | 19 | + |
| exon-exon | TMEM14A | 6 | + | TMEM14A | 6 | - |
| exon-intron | TMEM14B | 6 | + | MAK | 6 | + |
| exon-exon | TMEM14B | 6 | + | SYCP2L | 6 | + |
| exon-exon | TMEM14C | 6 | + | TMEM14B | 6 | + |
| intron-exon | TMEM150B | 19 | - | BRSK1 | 19 | - |
| exon-exon | TMEM151B | 6 | + | AARS2 | 6 | + |
| intron-exon | TMEM161B-AS1 | 5 | - | TMEM161B | 5 | - |
| intron-exon | TMEM165 | 4 | - | DMD | X | - |
| intron-exon | TMEM169 | 2 | - | PECR | 2 | - |
| exon-intron | TMEM170A | 16 | - | KIAA2012 | 2 | + |
| exon-exon | TMEM170A | 16 | - | CFDP1 | 16 | - |
| exon-exon | TMEM170A | 16 | - | CFDP1 | 16 | - |
| exon-exon | TMEM170A | 16 | - | CFDP1 | 16 | - |
| exon-exon | TMEM175 | 4 | - | BAG6 | 6 | + |
| exon-exon | TMEM184A | 7 | - | MAFK | 7 | - |
| exon-exon | TMEM184A | 7 | - | MAFK | 7 | - |
| exon-exon | TMEM184A | 7 | - | MAFK | 7 | - |
| exon-exon | TMEM184A | 7 | - | MAFK | 7 | - |
| exon-exon | TMEM184A | 7 | - | MAFK | 7 | - |
| exon-intron | TMEM184C | 4 | + | PRMT9 | 4 | + |
| exon-intron | TMEM185B | 2 | - | LINC01239 | 9 | + |
| exon-intron | TMEM185B | 2 | - | CACNA1A | 19 | - |
| exon-exon | TMEM189 | 20 | - | UBE2V1 | 20 | - |
| exon-exon | TMEM189 | 20 | - | UBE2V1 | 20 | - |
| exon-exon | TMEM189 | 20 | - | UBE2V1 | 20 | - |
| exon-intron | TMEM198B | 12 | + | RBFOX1 | 16 | + |
| exon-exon | TMEM198B | 12 | - | DNAJC14 | 12 | - |
| exon-exon | TMEM198B | 12 | - | DNAJC14 | 12 | - |
| exon-exon | TMEM198B | 12 | - | DNAJC14 | 12 | - |
| exon-exon | TMEM198B | 12 | - | DNAJC14 | 12 | - |
| exon-exon | TMEM198B | 12 | - | DNAJC14 | 12 | - |
| exon-exon | TMEM198B | 12 | - | DNAJC14 | 12 | - |
| exon-exon | TMEM198B | 12 | - | DNAJC14 | 12 | - |
| exon-exon | TMEM198B | 12 | - | DNAJC14 | 12 | - |
| exon-exon | TMEM198B | 12 | - | DNAJC14 | 12 | - |
| exon-exon | TMEM198B | 12 | - | DNAJC14 | 12 | - |
| exon-exon | TMEM198B | 12 | - | DNAJC14 | 12 | - |
| exon-exon | TMEM198B | 12 | - | DNAJC14 | 12 | - |
| exon-exon | TMEM198B | 12 | - | DNAJC14 | 12 | - |
| exon-exon | TMEM198B | 12 | - | DNAJC14 | 12 | - |
| exon-exon | TMEM198B | 12 | - | DNAJC14 | 12 | - |
| exon-exon | TMEM198B | 12 | - | DNAJC14 | 12 | - |
| exon-exon | TMEM198B | 12 | - | DNAJC14 | 12 | - |
| exon-exon | TMEM198B | 12 | - | DNAJC14 | 12 | - |
| exon-exon | TMEM198B | 12 | - | DNAJC14 | 12 | - |
| exon-intron | TMEM199 | 17 | + | VTN | 17 | + |
| exon-exon | TMEM200B | 1 | - | EPB41 | 1 | - |
| exon-exon | TMEM200B | 1 | - | SLC43A3 | 11 | - |
| exon-exon | TMEM200B | 1 | - | EPB41 | 1 | - |
| exon-exon | TMEM200B | 1 | - | EPB41 | 1 | - |
| exon-exon | TMEM200B | 1 | - | EPB41 | 1 | - |
| exon-exon | TMEM205 | 19 | + | CCDC159 | 19 | + |
| exon-intron | TMEM209 | 7 | + | ACBD5 | 10 | + |
| exon-exon | TMEM213 | 7 | + | KIAA1549 | 7 | + |
| exon-intron | TMEM213 | 7 | - | ATP6V0A4 | 7 | - |
| exon-intron | TMEM219 | 16 | + | RAB6A | 11 | + |
| exon-intron | TMEM220 | 17 | + | TMEM220-AS1 | 17 | + |
| exon-exon | TMEM223 | 11 | - | TMEM179B | 11 | - |
| exon-exon | TMEM223 | 11 | - | TMEM179B | 11 | - |
| exon-intron | TMEM223 | 11 | - | TAF6L | 11 | - |
| exon-intron | TMEM223 | 11 | - | TAF6L | 11 | - |
| exon-intron | TMEM223 | 11 | - | TAF6L | 11 | - |
| exon-intron | TMEM225B | 7 | - | ALG12 | 22 | - |
| exon-exon | TMEM234 | 1 | + | IQCC | 1 | + |
| exon-exon | TMEM234 | 1 | + | IQCC | 1 | + |
| exon-exon | TMEM234 | 1 | - | CCDC28B | 1 | - |
| intron-exon | TMEM241 | 18 | + | RIOK3 | 18 | + |
| exon-exon | TMEM244 | 6 | - | ARHGAP18 | 6 | - |
| exon-exon | TMEM248 | 7 | + | TMEM59 | 1 | - |
| exon-exon | TMEM248 | 7 | - | TMEM248 | 7 | + |
| exon-intron | TMEM248 | 7 | - | GS1-124K5.11 | 7 | - |
| exon-exon | TMEM249 | 8 | + | SLC52A2 | 8 | + |
| exon-exon | TMEM251 | 14 | + | UBR7 | 14 | + |
| exon-exon | TMEM251 | 14 | + | UBR7 | 14 | + |
| exon-intron | TMEM251 | 14 | + | AL110118.2 | 14 | + |
| exon-exon | TMEM251 | 14 | + | RPL7L1 | 6 | + |
| exon-intron | TMEM255B | 13 | + | GAS6 | 13 | + |
| exon-exon | TMEM255B | 13 | + | GAS6-AS1 | 13 | + |
| exon-exon | TMEM256 | 17 | - | PLSCR3 | 17 | - |
| exon-exon | TMEM256 | 17 | - | PLSCR3 | 17 | - |
| exon-exon | TMEM256 | 17 | - | PLSCR3 | 17 | - |
| exon-exon | TMEM256 | 17 | - | PLSCR3 | 17 | - |
| exon-exon | TMEM256 | 17 | - | PLSCR3 | 17 | - |
| exon-exon | TMEM256 | 17 | - | PLSCR3 | 17 | - |
| intron-exon | TMEM256 | 17 | - | PLSCR3 | 17 | - |
| exon-exon | TMEM256 | 17 | - | PLSCR3 | 17 | - |
| exon-exon | TMEM256 | 17 | - | PLSCR3 | 17 | - |
| exon-exon | TMEM256 | 17 | - | PLSCR3 | 17 | - |
| exon-exon | TMEM256 | 17 | - | PLSCR3 | 17 | - |
| exon-exon | TMEM256 | 17 | - | PLSCR3 | 17 | - |
| exon-exon | TMEM256 | 17 | - | PLSCR3 | 17 | - |
| exon-exon | TMEM256 | 17 | - | PLSCR3 | 17 | - |
| exon-exon | TMEM256 | 17 | - | PLSCR3 | 17 | - |
| exon-exon | TMEM256 | 17 | - | PLSCR3 | 17 | - |
| exon-exon | TMEM256 | 17 | - | PLSCR3 | 17 | - |
| exon-exon | TMEM256-PLSCR3 | 17 | - | TMEM256-PLSCR3 | 17 | - |
| exon-exon | TMEM256-PLSCR3 | 17 | - | TMEM256-PLSCR3 | 17 | - |
| exon-intron | TMEM258 | 11 | + | FEN1 | 11 | + |
| exon-intron | TMEM269 | 1 | - | PPIH | 1 | - |
| exon-exon | TMEM35B | 1 | + | ALB | 4 | - |
| exon-intron | TMEM35B | 1 | - | LOC653160 | 1 | - |
| exon-intron | TMEM38B | 9 | + | PDZD2 | 5 | - |
| exon-intron | TMEM41A | 3 | - | MAP3K13 | 3 | - |
| exon-exon | TMEM41A | 3 | - | LOC101929018 | 3 | - |
| exon-intron | TMEM41B | 11 | - | SRGAP2B | 1 | + |
| intron-exon | TMEM44 | 3 | - | TMEM44-AS1 | 3 | - |
| exon-intron | TMEM45B | 11 | - | ZFR | 5 | - |
| intron-exon | TMEM50B | 21 | - | IFNGR2 | 21 | - |
| intron-exon | TMEM50B | 21 | - | IFNGR2 | 21 | - |
| intron-exon | TMEM50B | 21 | - | IFNGR2 | 21 | - |
| intron-exon | TMEM50B | 21 | - | IFNGR2 | 21 | - |
| intron-exon | TMEM50B | 21 | - | IFNGR2 | 21 | - |
| intron-exon | TMEM50B | 21 | - | IFNGR2 | 21 | - |
| intron-exon | TMEM50B | 21 | - | IFNGR2 | 21 | - |
| intron-exon | TMEM50B | 21 | - | IFNGR2 | 21 | - |
| intron-exon | TMEM50B | 21 | - | IFNGR2 | 21 | - |
| intron-exon | TMEM50B | 21 | - | IFNGR2 | 21 | - |
| intron-exon | TMEM50B | 21 | - | IFNGR2 | 21 | - |
| intron-exon | TMEM50B | 21 | - | IFNGR2 | 21 | - |
| intron-exon | TMEM50B | 21 | - | IFNGR2 | 21 | - |
| intron-exon | TMEM50B | 21 | - | IFNGR2 | 21 | - |
| intron-exon | TMEM50B | 21 | - | IFNGR2 | 21 | - |
| intron-exon | TMEM50B | 21 | - | IFNGR2 | 21 | - |
| intron-exon | TMEM50B | 21 | - | IFNGR2 | 21 | - |
| intron-exon | TMEM50B | 21 | - | IFNGR2 | 21 | - |
| intron-exon | TMEM50B | 21 | - | IFNGR2 | 21 | - |
| exon-exon | TMEM51-AS1 | 1 | - | KAZN | 1 | - |
| exon-exon | TMEM51-AS1 | 1 | - | KAZN | 1 | - |
| intron-exon | TMEM52B | 12 | - | OLR1 | 12 | - |
| exon-exon | TMEM53 | 1 | - | LOC107984950 | 1 | - |
| exon-exon | TMEM53 | 1 | - | LOC107984950 | 1 | - |
| exon-exon | TMEM53 | 1 | - | LOC107984950 | 1 | - |
| exon-exon | TMEM53 | 1 | - | LOC107984950 | 1 | - |
| exon-exon | TMEM53 | 1 | - | LOC107984950 | 1 | - |
| exon-intron | TMEM59 | 1 | - | STX8 | 17 | - |
| intron-exon | TMEM59L | 19 | + | HAAO | 2 | - |
| exon-exon | TMEM60 | 7 | + | EPHB2 | 1 | - |
| intron-exon | TMEM63A | 1 | - | EPHX1 | 1 | - |
| intron-exon | TMEM63A | 1 | - | EPHX1 | 1 | - |
| intron-exon | TMEM63A | 1 | - | EPHX1 | 1 | - |
| intron-exon | TMEM63A | 1 | - | EPHX1 | 1 | - |
| intron-exon | TMEM63A | 1 | - | EPHX1 | 1 | - |
| intron-exon | TMEM63A | 1 | - | EPHX1 | 1 | - |
| intron-exon | TMEM63A | 1 | - | EPHX1 | 1 | - |
| intron-exon | TMEM63A | 1 | - | EPHX1 | 1 | - |
| intron-exon | TMEM63A | 1 | - | EPHX1 | 1 | - |
| intron-exon | TMEM63A | 1 | - | EPHX1 | 1 | - |
| intron-exon | TMEM63A | 1 | - | EPHX1 | 1 | - |
| intron-exon | TMEM63A | 1 | - | EPHX1 | 1 | - |
| intron-exon | TMEM63A | 1 | - | EPHX1 | 1 | - |
| intron-exon | TMEM63A | 1 | - | EPHX1 | 1 | - |
| exon-exon | TMEM63A | 1 | - | EPHX1 | 1 | - |
| exon-exon | TMEM63A | 1 | - | EPHX1 | 1 | - |
| exon-exon | TMEM68 | 8 | - | LOC105375846 | 8 | - |
| intron-exon | TMEM79 | 1 | + | GLMP | 1 | + |
| intron-exon | TMEM80 | 11 | + | EPS8L2 | 11 | + |
| exon-exon | TMEM87A | 15 | + | GANC | 15 | + |
| intron-exon | TMEM87A | 15 | + | GANC | 15 | + |
| exon-intron | TMEM87A | 15 | - | DDX47 | 12 | + |
| intron-exon | TMEM87A | 15 | - | LOC105370795 | 15 | - |
| exon-exon | TMEM91 | 19 | + | BCKDHA | 19 | + |
| exon-exon | TMEM9B | 11 | - | NFATC2IP | 16 | + |
| exon-exon | TMEM9B | 11 | - | NFATC2IP | 16 | + |
| exon-intron | TMEM9B | 11 | - | EIF3L | 22 | - |
| exon-intron | TMOD1 | 9 | + | TSTD2 | 9 | + |
| exon-exon | TMPO | 12 | - | TMPO-AS1 | 12 | - |
| exon-exon | TMPO | 12 | - | ARPC1A | 7 | + |
| exon-exon | TMPO | 12 | - | ARPC1A | 7 | + |
| exon-intron | TMPRSS2 | 21 | + | LOC111099027 | 21 | + |
| exon-exon | TMPRSS2 | 21 | - | ERG | 21 | - |
| exon-exon | TMPRSS2 | 21 | - | ERG | 21 | - |
| exon-exon | TMPRSS2 | 21 | - | ERG | 21 | - |
| exon-exon | TMPRSS2 | 21 | - | ERG | 21 | - |
| exon-exon | TMPRSS2 | 21 | - | ETV5 | 3 | - |
| exon-intron | TMSB10 | 2 | + | LOC105374836 | 2 | + |
| exon-intron | TMSB10 | 2 | + | LOC105374836 | 2 | + |
| exon-intron | TMSB10 | 2 | + | BCL2L13 | 22 | - |
| exon-intron | TMSB10 | 2 | + | PPP2R5A | 1 | - |
| intron-exon | TMSB10 | 2 | - | LOC105374836 | 2 | - |
| intron-exon | TMSB10 | 2 | - | TRABD2A | 2 | - |
| intron-exon | TMSB15B-AS1 | X | + | DPPA3 | 12 | - |
| exon-intron | TMTC2 | 12 | + | FMN2 | 1 | - |
| exon-exon | TMX2 | 11 | + | CTNND1 | 11 | + |
| exon-exon | TMX2-CTNND1 | 11 | + | TMX2-CTNND1 | 11 | + |
| exon-intron | TMX4 | 20 | + | LOC105372520 | 20 | + |
| exon-intron | TNF | 6 | + | RSU1 | 10 | - |
| exon-exon | TNF | 6 | - | ZNF276 | 16 | + |
| exon-intron | TNFAIP2 | 14 | + | PPM1E | 17 | - |
| intron-exon | TNFAIP8L1 | 19 | + | MYDGF | 19 | + |
| exon-exon | TNFAIP8L2 | 1 | + | SCNM1 | 1 | + |
| exon-intron | TNFRSF12A | 16 | + | PLPP2 | 19 | + |
| exon-exon | TNFRSF12A | 16 | - | TMEM94 | 17 | - |
| exon-intron | TNFRSF13B | 17 | - | TBC1D27P | 17 | - |
| intron-exon | TNFRSF14 | 1 | - | TNFRSF14-AS1 | 1 | - |
| exon-exon | TNFRSF14-AS1 | 1 | + | TNFRSF14 | 1 | + |
| exon-exon | TNFRSF25 | 1 | - | ESPN | 1 | - |
| exon-intron | TNFSF10 | 3 | - | MAST4 | 5 | + |
| exon-exon | TNFSF12 | 17 | + | TNFSF13 | 17 | + |
| exon-exon | TNFSF12 | 17 | + | TNFSF13 | 17 | + |
| exon-exon | TNFSF12-TNFSF13 | 17 | + | TNFSF13 | 17 | + |
| exon-exon | TNFSF12-TNFSF13 | 17 | + | TNFSF13 | 17 | + |
| exon-intron | TNFSF4 | 1 | - | NUTM2A-AS1 | 10 | - |
| exon-intron | TNFSF9 | 19 | - | LINC00486 | 2 | + |
| exon-exon | TNIP1 | 5 | + | VIM | 10 | + |
| exon-exon | TNK2-AS1 | 3 | - | TNK2 | 3 | - |
| exon-exon | TNKS1BP1 | 11 | + | LOC100506358 | 14 | - |
| exon-intron | TNNT1 | 19 | - | LOC105377043 | 3 | + |
| exon-exon | TNRC6A | 16 | + | SIRT1 | 10 | + |
| exon-exon | TNRC6A | 16 | + | LOC107984825 | 16 | + |
| exon-exon | TNRC6C | 17 | + | TMC6 | 17 | + |
| intron-exon | TNXA | 6 | + | STK19B | 6 | + |
| exon-exon | TOB1 | 17 | + | HSP90AA1 | 14 | - |
| intron-exon | TOB2 | 22 | + | SLC35D1 | 1 | - |
| intron-exon | TOGARAM1 | 14 | - | KLHL28 | 14 | - |
| intron-exon | TOM1L1 | 17 | + | LAMP2 | X | - |
| exon-exon | TOM1L1 | 17 | + | COX11 | 17 | + |
| intron-exon | TOMM34 | 20 | - | PABPC1L | 20 | - |
| intron-exon | TOMM34 | 20 | - | PABPC1L | 20 | - |
| intron-exon | TOMM40L | 1 | - | ARPC1A | 7 | + |
| exon-intron | TOMM5 | 9 | - | FBXO10 | 9 | - |
| exon-intron | TOMM6 | 6 | + | USP49 | 6 | + |
| exon-exon | TOMM6 | 6 | - | PRICKLE4 | 6 | - |
| exon-exon | TOPORS | 9 | - | DDX58 | 9 | - |
| exon-exon | TOPORS | 9 | - | DDX58 | 9 | - |
| exon-exon | TOPORS | 9 | - | DDX58 | 9 | - |
| exon-exon | TOPORS | 9 | - | DDX58 | 9 | - |
| exon-exon | TOPORS | 9 | - | DDX58 | 9 | - |
| exon-exon | TOPORS | 9 | - | DDX58 | 9 | - |
| exon-exon | TOPORS | 9 | - | DDX58 | 9 | - |
| exon-exon | TOPORS | 9 | - | DDX58 | 9 | - |
| exon-exon | TOPORS | 9 | - | DDX58 | 9 | - |
| exon-intron | TOR1AIP2 | 1 | + | SLC16A10 | 6 | - |
| exon-intron | TOX4 | 14 | + | METTL3 | 14 | + |
| exon-exon | TP53BP1 | 15 | - | TUBGCP4 | 15 | - |
| exon-exon | TP53BP1 | 15 | - | TUBGCP4 | 15 | - |
| exon-exon | TP53BP1 | 15 | - | TUBGCP4 | 15 | - |
| exon-exon | TP53BP1 | 15 | - | TUBGCP4 | 15 | - |
| exon-exon | TP53BP1 | 15 | - | TUBGCP4 | 15 | - |
| exon-exon | TP53BP1 | 15 | - | TUBGCP4 | 15 | - |
| exon-exon | TP53RK | 20 | - | SLC13A3 | 20 | - |
| intron-exon | TPD52 | 8 | + | LOC105375918 | 8 | + |
| exon-exon | TPD52 | 8 | - | MRPS28 | 8 | - |
| exon-exon | TPGS2 | 18 | - | FHOD3 | 18 | - |
| exon-exon | TPI1 | 12 | + | TOP2B | 3 | - |
| exon-intron | TPI1 | 12 | + | LOC102724150 | X | + |
| exon-exon | TPM2 | 9 | + | MYBPC1 | 12 | - |
| exon-exon | TPM2 | 9 | - | TPM3P5 | 19 | + |
| exon-intron | TPM3 | 1 | + | TPM3 | 1 | - |
| exon-exon | TPM3 | 1 | - | ALK | 2 | - |
| intron-exon | TPM3 | 1 | - | SEC24D | 4 | - |
| intron-exon | TPM3 | 1 | - | SEC24D | 4 | - |
| exon-exon | TPM3 | 1 | - | ROS1 | 6 | - |
| exon-exon | TPM4 | 19 | + | ALK | 2 | - |
| exon-intron | TPM4 | 19 | - | TPM4 | 19 | + |
| exon-intron | TPP2 | 13 | + | SHTN1 | 10 | - |
| exon-exon | TPR | 1 | - | PRG4 | 1 | - |
| exon-exon | TPR | 1 | - | PRG4 | 1 | - |
| exon-exon | TPR | 1 | - | PRG4 | 1 | - |
| exon-exon | TPR | 1 | - | PRG4 | 1 | - |
| exon-exon | TPR | 1 | - | MET | 7 | + |
| exon-intron | TPRG1-AS1 | 3 | + | LOC107986167 | 3 | + |
| exon-intron | TPRG1L | 1 | - | ZNF320 | 19 | + |
| exon-intron | TPST2 | 22 | - | SEZ6L | 22 | - |
| intron-exon | TPST2 | 22 | - | MMP2 | 16 | - |
| exon-intron | TPT1 | 13 | + | PRDX1 | 1 | - |
| exon-intron | TPT1 | 13 | - | WWOX | 16 | - |
| exon-exon | TPT1 | 13 | - | TPT1 | 13 | + |
| exon-exon | TPT1 | 13 | - | RNA45SN2 | 21 | + |
| exon-exon | TPT1 | 13 | - | RNA45SN2 | 21 | + |
| exon-intron | TPT1 | 13 | - | RAB3D | 19 | + |
| exon-exon | TPT1 | 13 | - | DUT | 15 | + |
| exon-exon | TPT1-AS1 | 13 | - | LOC105369647 | 12 | + |
| exon-intron | TPT1-AS1 | 13 | - | LOC102723968 | 13 | + |
| intron-exon | TPTE2P1 | 13 | + | TPTE2P6 | 13 | - |
| exon-exon | TPTE2P2 | 13 | - | MRPS31P5 | 13 | - |
| exon-exon | TPTEP2 | 22 | - | CSNK1E | 22 | - |
| exon-exon | TPTEP2 | 22 | - | CSNK1E | 22 | - |
| exon-exon | TPTEP2 | 22 | - | CSNK1E | 22 | - |
| exon-intron | TPTEP2 | 22 | - | TPTEP2-CSNK1E | 22 | - |
| exon-exon | TPTEP2-CSNK1E | 22 | - | TPTEP2-CSNK1E | 22 | - |
| intron-exon | TRA | 14 | + | TRAV5 | 14 | + |
| intron-exon | TRA | 14 | + | TRAV8-3 | 14 | + |
| intron-exon | TRA | 14 | + | TRAV8-3 | 14 | + |
| intron-exon | TRA | 14 | + | TRAV26-1 | 14 | + |
| intron-exon | TRA | 14 | + | TRAV38-2DV8 | 14 | + |
| intron-exon | TRA | 14 | + | TRDC | 14 | + |
| intron-exon | TRA | 14 | + | TRDC | 14 | + |
| intron-exon | TRA | 14 | + | TRDC | 14 | + |
| intron-exon | TRA | 14 | + | TRAC | 14 | + |
| intron-exon | TRA | 14 | + | TRAC | 14 | + |
| intron-exon | TRA | 14 | + | TRAC | 14 | + |
| intron-exon | TRA | 14 | + | TRAC | 14 | + |
| intron-exon | TRA | 14 | + | TRAC | 14 | + |
| exon-intron | TRA2A | 7 | - | PI4K2A | 10 | - |
| exon-exon | TRABD | 22 | + | CACNA1I | 22 | - |
| exon-intron | TRABD | 22 | + | AL022328.4 | 22 | + |
| exon-intron | TRAC | 14 | - | LOC112267867 | 14 | - |
| intron-exon | TRAF3IP2 | 6 | - | REV3L | 6 | - |
| intron-exon | TRAF3IP2-AS1 | 6 | - | MEF2C | 5 | - |
| exon-exon | TRAJ11 | 14 | + | TRAC | 14 | + |
| exon-exon | TRAJ13 | 14 | + | TRAC | 14 | + |
| exon-exon | TRAJ17 | 14 | + | TRAC | 14 | + |
| exon-exon | TRAJ3 | 14 | + | TRAC | 14 | + |
| exon-exon | TRAJ32 | 14 | + | TRAC | 14 | + |
| exon-exon | TRAJ33 | 14 | + | TRAC | 14 | + |
| exon-exon | TRAJ34 | 14 | + | TRAC | 14 | + |
| exon-exon | TRAJ39 | 14 | + | TRAC | 14 | + |
| exon-exon | TRAJ40 | 14 | + | TRAC | 14 | + |
| exon-exon | TRAJ44 | 14 | + | TRAC | 14 | + |
| exon-exon | TRAJ45 | 14 | + | TRAC | 14 | + |
| exon-exon | TRAJ48 | 14 | + | TRAC | 14 | + |
| exon-exon | TRAJ58 | 14 | + | TRAC | 14 | + |
| exon-exon | TRAJ6 | 14 | + | TRAC | 14 | + |
| exon-intron | TRAM1L1 | 4 | - | PTGS1 | 9 | - |
| exon-intron | TRAM2 | 6 | + | TMEM164 | X | + |
| intron-exon | TRAPPC13 | 5 | - | TRIM23 | 5 | - |
| intron-exon | TRAPPC13 | 5 | - | TRIM23 | 5 | - |
| intron-exon | TRAPPC2L | 16 | - | GALNS | 16 | - |
| intron-exon | TRAPPC2L | 16 | - | GALNS | 16 | - |
| intron-exon | TRAPPC3 | 1 | + | MAP7D1 | 1 | + |
| intron-exon | TRAPPC3L | 6 | + | CALHM4 | 6 | + |
| exon-exon | TRAPPC4 | 11 | - | RPS25P6 | 5 | - |
| exon-intron | TRAPPC4 | 11 | - | ARL14EPL | 5 | - |
| exon-intron | TRAPPC4 | 11 | - | ARL14EPL | 5 | - |
| exon-exon | TRAPPC4 | 11 | - | RPS25 | 11 | - |
| exon-exon | TRAPPC4 | 11 | - | RPS25 | 11 | - |
| exon-exon | TRAPPC4 | 11 | - | RPS25P6 | 5 | - |
| exon-exon | TRAPPC4 | 11 | - | RPS25 | 11 | - |
| exon-exon | TRAPPC4 | 11 | - | RPS25 | 11 | - |
| exon-intron | TRAPPC4 | 11 | - | RPS25 | 11 | - |
| exon-exon | TRAPPC5 | 19 | - | MCEMP1 | 19 | - |
| exon-exon | TRAPPC5 | 19 | - | MCEMP1 | 19 | - |
| exon-intron | TRAV18 | 14 | + | TRA | 14 | + |
| exon-intron | TRAV38-2DV8 | 14 | - | TRA | 14 | - |
| exon-intron | TRAV8-3 | 14 | - | TRA | 14 | - |
| exon-exon | TRAV8-4 | 14 | - | TRAV8-4 | 14 | + |
| intron-exon | TRB | 7 | + | TRBV5-4 | 7 | + |
| intron-exon | TRB | 7 | + | TRBV5-7 | 7 | + |
| intron-exon | TRB | 7 | + | TRBV5-6 | 7 | + |
| intron-exon | TRB | 7 | + | TRBV12-4 | 7 | + |
| intron-exon | TRB | 7 | + | ALDH6A1 | 14 | - |
| intron-exon | TRB | 7 | + | TRBC1 | 7 | + |
| intron-exon | TRB | 7 | + | TRBC1 | 7 | + |
| intron-exon | TRB | 7 | + | TRBC1 | 7 | + |
| intron-exon | TRB | 7 | + | TRBC2 | 7 | + |
| intron-exon | TRB | 7 | + | TRBC2 | 7 | + |
| intron-exon | TRB | 7 | + | TRBC2 | 7 | + |
| intron-exon | TRB | 7 | + | TRBC1 | 7 | + |
| intron-exon | TRB | 7 | - | TRBV12-4 | 7 | - |
| intron-exon | TRB | 7 | - | TRBC1 | 7 | - |
| intron-exon | TRB | 7 | - | PSMD1 | 2 | - |
| exon-exon | TRBC1 | 7 | + | TRBV11-3 | 7 | + |
| exon-intron | TRBC1 | 7 | + | TRB | 7 | + |
| exon-intron | TRBC1 | 7 | - | TRB | 7 | - |
| exon-intron | TRBC1 | 7 | - | TRB | 7 | - |
| exon-intron | TRBC1 | 7 | - | TRB | 7 | - |
| exon-intron | TRBC1 | 7 | - | TRB | 7 | - |
| exon-intron | TRBC2 | 7 | + | TRB | 7 | + |
| exon-intron | TRBC2 | 7 | + | TRB | 7 | + |
| exon-intron | TRBC2 | 7 | + | TRB | 7 | + |
| exon-exon | TRBC2 | 7 | - | TRBC1 | 7 | - |
| exon-exon | TRBC2 | 7 | - | TRBC1 | 7 | - |
| exon-exon | TRBC2 | 7 | - | TRBC1 | 7 | - |
| exon-exon | TRBC2 | 7 | - | TRBC1 | 7 | - |
| exon-exon | TRBJ1-3 | 7 | + | TRBC1 | 7 | + |
| exon-exon | TRBJ1-4 | 7 | + | TRBC1 | 7 | + |
| exon-exon | TRBJ2-3 | 7 | + | TRBC2 | 7 | + |
| exon-exon | TRBJ2-5 | 7 | + | TRBC2 | 7 | + |
| exon-intron | TRBV18 | 7 | + | TRB | 7 | + |
| exon-exon | TRBV20-1 | 7 | + | TRBV18 | 7 | + |
| exon-intron | TRBV20-1 | 7 | - | TRB | 7 | - |
| exon-intron | TRBV9 | 7 | - | TRB | 7 | - |
| exon-intron | TRBV9 | 7 | - | TRB | 7 | - |
| exon-intron | TRBV9 | 7 | - | TRB | 7 | - |
| exon-intron | TRBVB | 7 | - | TRB | 7 | - |
| exon-intron | TRBVB | 7 | - | TRB | 7 | - |
| intron-exon | TRD | 14 | + | TRDC | 14 | + |
| intron-exon | TRD | 14 | + | TRDC | 14 | + |
| intron-exon | TRD | 14 | + | TRDC | 14 | + |
| intron-exon | TRD | 14 | + | TRDC | 14 | + |
| exon-intron | TRDC | 14 | + | TRA | 14 | + |
| exon-exon | TRDJ1 | 14 | + | TRDC | 14 | + |
| exon-exon | TRDV2 | 14 | + | TRAC | 14 | + |
| exon-exon | TREH | 11 | - | PHLDB1 | 11 | - |
| intron-exon | TRERF1 | 6 | + | LOC105375061 | 6 | + |
| intron-exon | TRG | 7 | - | TRGV9 | 7 | - |
| intron-exon | TRG | 7 | - | TRGV9 | 7 | - |
| intron-exon | TRG | 7 | - | TRGV5 | 7 | - |
| intron-exon | TRG | 7 | - | TRGV3 | 7 | - |
| intron-exon | TRG | 7 | - | TRGV3 | 7 | - |
| exon-intron | TRGV5 | 7 | - | TRG | 7 | - |
| exon-exon | TRIM13 | 13 | + | KCNRG | 13 | + |
| exon-exon | TRIM13 | 13 | + | KCNRG | 13 | + |
| exon-exon | TRIM13 | 13 | + | KCNRG | 13 | + |
| exon-exon | TRIM14 | 9 | - | NANS | 9 | - |
| exon-exon | TRIM14 | 9 | - | NANS | 9 | - |
| exon-exon | TRIM14 | 9 | - | NANS | 9 | - |
| intron-exon | TRIM14 | 9 | - | NANS | 9 | - |
| exon-exon | TRIM14 | 9 | - | NANS | 9 | - |
| exon-exon | TRIM14 | 9 | - | NANS | 9 | - |
| exon-exon | TRIM14 | 9 | - | NANS | 9 | - |
| exon-exon | TRIM14 | 9 | - | NANS | 9 | - |
| exon-exon | TRIM14 | 9 | - | NANS | 9 | - |
| exon-exon | TRIM14 | 9 | - | NANS | 9 | - |
| exon-exon | TRIM14 | 9 | - | NANS | 9 | - |
| exon-exon | TRIM14 | 9 | - | NANS | 9 | - |
| exon-intron | TRIM22 | 11 | + | OR52N4 | 11 | + |
| exon-exon | TRIM22 | 11 | + | OR52N4 | 11 | + |
| exon-exon | TRIM25 | 17 | - | CXXC1 | 18 | + |
| exon-exon | TRIM28 | 19 | - | NUCB1 | 19 | - |
| exon-exon | TRIM28 | 19 | - | NUCB1 | 19 | - |
| intron-exon | TRIM29 | 11 | + | OAF | 11 | + |
| intron-exon | TRIM31 | 6 | + | TRIM31-AS1 | 6 | + |
| exon-exon | TRIM31-AS1 | 6 | - | TRIM31 | 6 | - |
| intron-exon | TRIM33 | 1 | - | PPM1K | 4 | - |
| exon-exon | TRIM39 | 6 | + | RPP21 | 6 | + |
| exon-intron | TRIM39 | 6 | + | TRIM39-RPP21 | 6 | + |
| exon-exon | TRIM39 | 6 | - | HCG18 | 6 | - |
| exon-exon | TRIM39-RPP21 | 6 | + | RPP21 | 6 | + |
| intron-exon | TRIM39-RPP21 | 6 | + | RPP21 | 6 | + |
| exon-exon | TRIM46 | 1 | - | KRTCAP2 | 1 | - |
| intron-exon | TRIM5 | 11 | + | TRIM6-TRIM34 | 11 | + |
| exon-exon | TRIM52 | 5 | - | RACK1 | 5 | - |
| exon-intron | TRIM52 | 5 | - | CTC-338M12.4 | 5 | - |
| exon-intron | TRIM52-AS1 | 5 | - | LOC101928344 | 19 | + |
| intron-exon | TRIM59-IFT80 | 3 | + | SMC4 | 3 | + |
| intron-exon | TRIM59-IFT80 | 3 | + | SMC4 | 3 | + |
| intron-exon | TRIM59-IFT80 | 3 | + | SMC4 | 3 | + |
| exon-exon | TRIM6 | 11 | + | TRIM34 | 11 | + |
| exon-exon | TRIM6-TRIM34 | 11 | + | TRIM6-TRIM34 | 11 | + |
| intron-exon | TRIM62 | 1 | - | AZIN2 | 1 | - |
| intron-exon | TRIM62 | 1 | - | AZIN2 | 1 | - |
| exon-exon | TRIM63 | 1 | - | PTMAP5 | 13 | + |
| intron-exon | TRIM66 | 11 | + | RPL27A | 11 | + |
| intron-exon | TRIM7 | 5 | + | TRIM7-AS1 | 5 | + |
| exon-intron | TRIM73 | 7 | - | LOC541473 | 7 | - |
| exon-exon | TRIOBP | 22 | - | KIF1B | 1 | - |
| intron-exon | TRIP12 | 2 | + | FBXO36P1 | 17 | + |
| exon-intron | TRMT10A | 4 | + | MTTP | 4 | + |
| exon-exon | TRMT10A | 4 | + | MTTP | 4 | + |
| exon-exon | TRMT10A | 4 | + | MTTP | 4 | + |
| exon-exon | TRMT10B | 9 | + | EXOSC3 | 9 | - |
| exon-exon | TRMT10B | 9 | + | EXOSC3 | 9 | - |
| exon-exon | TRMT112 | 11 | - | ESRRA | 11 | - |
| exon-exon | TRMT112 | 11 | - | ESRRA | 11 | - |
| exon-exon | TRMT2A | 22 | + | LOC389842 | X | - |
| exon-exon | TRMT2A | 22 | - | SRRM3 | 7 | + |
| exon-intron | TRMT61B | 2 | - | SPDYA | 2 | - |
| exon-intron | TRMT61B | 2 | - | MTND1P23 | 1 | + |
| exon-intron | TRN-GTT2-6 | 19 | + | NDUFS7 | 19 | + |
| intron-exon | TRNC | MT | - | EEF1G | 11 | + |
| intron-exon | TRNS1 | MT | - | COX1 | MT | - |
| intron-exon | TRNS1 | MT | - | COX1 | MT | - |
| intron-exon | TRNV | MT | - | ARPP19 | 15 | + |
| intron-exon | TRR-ACG2-1 | 3 | + | SACM1L | 3 | + |
| intron-exon | TRUB2 | 9 | + | TAPBP | 6 | + |
| intron-exon | TSACC | 1 | - | CCT3 | 1 | - |
| exon-exon | TSC22D1 | 13 | + | TSC22D1-AS1 | 13 | + |
| intron-exon | TSC22D1 | 13 | - | SF3B5 | 6 | + |
| intron-exon | TSC22D1 | 13 | - | IGF2BP2 | 3 | - |
| exon-exon | TSC22D3 | X | + | TSC22D3 | X | - |
| exon-exon | TSC22D4 | 7 | - | C7orf61 | 7 | - |
| exon-exon | TSC22D4 | 7 | - | C7orf61 | 7 | - |
| exon-exon | TSC22D4 | 7 | - | C7orf61 | 7 | - |
| exon-exon | TSFM | 12 | - | EEF1AKMT3 | 12 | - |
| exon-exon | TSFM | 12 | - | EEF1AKMT3 | 12 | - |
| exon-intron | TSG101 | 11 | - | MPV17L | 16 | - |
| intron-exon | TSGA10 | 2 | + | C2orf15 | 2 | + |
| exon-intron | TSHR | 14 | + | LOC101928462 | 14 | + |
| intron-exon | TSHR | 14 | - | CEP128 | 14 | - |
| intron-exon | TSHR | 14 | - | CEP128 | 14 | - |
| intron-exon | TSHZ2 | 20 | - | AP3S1 | 5 | + |
| exon-intron | TSHZ2 | 20 | - | DGKB | 7 | - |
| exon-intron | TSIX | X | - | DNM2 | 19 | + |
| exon-exon | TSN | 2 | + | ARL4D | 17 | - |
| exon-intron | TSNAX | 1 | + | TSNAX-DISC1 | 1 | + |
| exon-intron | TSNAX | 1 | + | DISC1 | 1 | + |
| exon-intron | TSNAX | 1 | + | DISC1 | 1 | + |
| exon-exon | TSNAX | 1 | + | DISC1 | 1 | + |
| exon-intron | TSNAX | 1 | - | AL445524.1 | 1 | - |
| exon-intron | TSNAX | 1 | - | AL445524.2 | 1 | - |
| intron-exon | TSNAX-DISC1 | 1 | + | SLC25A3 | 12 | + |
| exon-exon | TSNAX-DISC1 | 1 | + | TSNAX-DISC1 | 1 | + |
| exon-exon | TSNAX-DISC1 | 1 | + | TSNAX-DISC1 | 1 | + |
| intron-exon | TSNAXIP1 | 16 | + | FKRP | 19 | - |
| intron-exon | TSNAXIP1 | 16 | + | MSANTD2 | 11 | - |
| exon-intron | TSPAN1 | 1 | + | PRKY | Y | - |
| intron-exon | TSPAN1 | 1 | - | PIK3R3 | 1 | - |
| intron-exon | TSPAN14 | 10 | + | BRD3OS | 9 | - |
| exon-exon | TSPAN14 | 10 | - | YWHAH | 22 | - |
| exon-intron | TSPAN15 | 10 | + | CCBE1 | 18 | - |
| exon-intron | TSPAN31 | 12 | + | CDK4 | 12 | + |
| exon-intron | TSPAN31 | 12 | - | AGAP2 | 12 | - |
| exon-exon | TSPO2 | 6 | - | UNC5CL | 6 | - |
| exon-exon | TSR1 | 17 | - | SRR | 17 | - |
| exon-exon | TSTD1 | 1 | - | F11R | 1 | - |
| exon-exon | TSTD1 | 1 | - | F11R | 1 | - |
| exon-exon | TSTD1 | 1 | - | F11R | 1 | - |
| exon-exon | TSTD1 | 1 | - | F11R | 1 | - |
| exon-exon | TSTD1 | 1 | - | F11R | 1 | - |
| exon-intron | TSTD1 | 1 | - | F11R | 1 | - |
| exon-exon | TSTD1 | 1 | - | F11R | 1 | - |
| exon-exon | TSTD1 | 1 | - | F11R | 1 | - |
| exon-intron | TSTD1 | 1 | - | RP11-544M22.13 | 1 | - |
| exon-intron | TSTD1 | 1 | - | F11R | 1 | - |
| intron-exon | TSTD1 | 1 | - | F11R | 1 | - |
| intron-exon | TSTD1 | 1 | - | F11R | 1 | - |
| intron-exon | TSTD2 | 9 | + | KRT4 | 12 | - |
| intron-exon | TSTD2 | 9 | + | PAK1 | 11 | - |
| exon-exon | TSTD2 | 9 | - | TMOD1 | 9 | - |
| exon-intron | TSTD3 | 6 | - | PNISR | 6 | - |
| intron-exon | TTBK2 | 15 | + | CDAN1 | 15 | - |
| intron-exon | TTBK2 | 15 | + | CDAN1 | 15 | - |
| exon-intron | TTC21B | 2 | + | DOCK1 | 10 | - |
| intron-exon | TTC23L | 5 | + | RAD1 | 5 | + |
| intron-exon | TTC28-AS1 | 22 | - | PITPNB | 22 | - |
| intron-exon | TTC3 | 21 | - | TTC3 | 21 | + |
| exon-exon | TTC3-AS1 | 21 | - | TTC3 | 21 | - |
| intron-exon | TTC3-AS1 | 21 | - | TTC3 | 21 | - |
| intron-exon | TTC3-AS1 | 21 | - | TTC3 | 21 | - |
| intron-exon | TTC3-AS1 | 21 | - | TTC3 | 21 | - |
| intron-exon | TTC6 | 14 | - | FOXA1 | 14 | - |
| exon-exon | TTC7B | 14 | + | TTC7B | 14 | - |
| exon-intron | TTC7B | 14 | + | LOC101928909 | 14 | + |
| exon-intron | TTC7B | 14 | + | LOC101928909 | 14 | + |
| exon-intron | TTF1 | 9 | - | MED27 | 9 | - |
| intron-exon | TTL | 2 | - | CD68 | 17 | - |
| exon-intron | TTLL5 | 14 | - | FLVCR2 | 14 | - |
| exon-exon | TTLL5 | 14 | - | FLVCR2 | 14 | - |
| exon-intron | TTLL5 | 14 | - | FLVCR2 | 14 | - |
| exon-exon | TTLL5 | 14 | - | FLVCR2 | 14 | - |
| exon-intron | TTLL5 | 14 | - | FLVCR2 | 14 | - |
| exon-intron | TTLL5 | 14 | - | FLVCR2 | 14 | - |
| exon-exon | TTN | 2 | - | TTN-AS1 | 2 | - |
| exon-exon | TTN | 2 | - | TTN-AS1 | 2 | - |
| intron-exon | TTN-AS1 | 2 | + | TTN | 2 | - |
| exon-exon | TTR | 18 | - | ND5 | MT | - |
| exon-exon | TTTY9A | Y | + | HSFY1 | Y | - |
| exon-exon | TUBA1A | 12 | + | SNRNP27 | 2 | - |
| exon-exon | TUBA1A | 12 | + | TUBA1C | 12 | - |
| exon-exon | TUBA1A | 12 | + | TUBA1C | 12 | - |
| exon-exon | TUBA1A | 12 | + | TUBA1C | 12 | + |
| exon-intron | TUBA1A | 12 | - | PPFIBP2 | 11 | - |
| exon-exon | TUBA1A | 12 | - | DHRSX | X | - |
| exon-exon | TUBA1A | 12 | - | TUBA1B | 12 | - |
| exon-exon | TUBA1A | 12 | - | TUBA1C | 12 | + |
| exon-exon | TUBA1A | 12 | - | TUBA1C | 12 | + |
| exon-exon | TUBA1A | 12 | - | TUBA1C | 12 | + |
| exon-exon | TUBA1B | 12 | + | EPRS1 | 1 | + |
| exon-exon | TUBA1B | 12 | + | TUBA1A | 12 | + |
| exon-exon | TUBA1B | 12 | + | TUBA1C | 12 | - |
| exon-exon | TUBA1B | 12 | + | TUBA1C | 12 | - |
| exon-exon | TUBA1B | 12 | + | TUBA1C | 12 | - |
| exon-exon | TUBA1B | 12 | + | TUBA1C | 12 | - |
| exon-exon | TUBA1B | 12 | + | TUBA1C | 12 | - |
| intron-exon | TUBA1B | 12 | + | LOC105369760 | 12 | + |
| exon-exon | TUBA1B | 12 | - | TUBA1C | 12 | + |
| exon-exon | TUBA1B | 12 | - | TUBA1C | 12 | + |
| exon-exon | TUBA1B | 12 | - | TUBA1C | 12 | + |
| exon-exon | TUBA1B | 12 | - | TUBA1C | 12 | + |
| exon-exon | TUBA1B | 12 | - | TUBA1C | 12 | + |
| exon-exon | TUBA1B | 12 | - | TUBA1C | 12 | + |
| exon-exon | TUBA1B | 12 | - | TUBA1C | 12 | + |
| exon-exon | TUBA1B | 12 | - | TUBA1C | 12 | + |
| exon-intron | TUBA3FP | 22 | - | THAP7-AS1 | 22 | - |
| exon-exon | TUBA8 | 22 | - | PEX26 | 22 | - |
| exon-exon | TUBB2A | 6 | + | TUBB2BP1 | 6 | + |
| exon-exon | TUBB2A | 6 | + | TUBB2BP1 | 6 | + |
| exon-intron | TUBB2A | 6 | - | NARS2 | 11 | + |
| exon-exon | TUBB2B | 6 | - | TUBB2A | 6 | - |
| exon-exon | TUBB2B | 6 | - | TUBB2A | 6 | - |
| exon-exon | TUBB2B | 6 | - | TUBB2A | 6 | - |
| exon-intron | TUBB6 | 18 | + | AFG3L2 | 18 | + |
| exon-intron | TUBB6 | 18 | + | LOC107985154 | 18 | + |
| exon-intron | TUBB6 | 18 | + | LOC107985154 | 18 | + |
| exon-exon | TUBG1 | 17 | + | TUBG2 | 17 | + |
| intron-exon | TUBG1 | 17 | - | RETREG3 | 17 | - |
| intron-exon | TUBG1 | 17 | - | RETREG3 | 17 | - |
| intron-exon | TUBG1 | 17 | - | RETREG3 | 17 | - |
| intron-exon | TUBG1 | 17 | - | RETREG3 | 17 | - |
| intron-exon | TUBG1 | 17 | - | RETREG3 | 17 | - |
| intron-exon | TUBG1 | 17 | - | RETREG3 | 17 | - |
| exon-exon | TUBGCP2 | 10 | + | ZNF511 | 10 | + |
| exon-exon | TUFT1 | 1 | + | RNF115 | 1 | - |
| exon-exon | TULP2 | 19 | + | NUCB1 | 19 | + |
| exon-exon | TULP2 | 19 | + | NUCB1 | 19 | + |
| intron-exon | TULP4 | 6 | - | RACK1 | 5 | - |
| exon-exon | TUSC2 | 3 | - | HYAL2 | 3 | - |
| exon-exon | TUSC2 | 3 | - | HYAL2 | 3 | - |
| exon-exon | TUSC2 | 3 | - | HYAL2 | 3 | - |
| intron-exon | TUT1 | 11 | - | EEF1G | 11 | - |
| intron-exon | TUT1 | 11 | - | EEF1G | 11 | - |
| intron-exon | TUT1 | 11 | - | EEF1G | 11 | - |
| intron-exon | TUT1 | 11 | - | EEF1G | 11 | - |
| exon-exon | TVP23A | 16 | - | NUBP1 | 16 | - |
| exon-exon | TVP23A | 16 | - | NUBP1 | 16 | - |
| exon-exon | TVP23A | 16 | - | NUBP1 | 16 | - |
| exon-exon | TVP23A | 16 | - | NUBP1 | 16 | - |
| exon-exon | TVP23A | 16 | - | NUBP1 | 16 | - |
| exon-exon | TVP23A | 16 | - | NUBP1 | 16 | - |
| exon-exon | TVP23A | 16 | - | NUBP1 | 16 | - |
| exon-exon | TVP23A | 16 | - | NUBP1 | 16 | - |
| exon-exon | TVP23A | 16 | - | NUBP1 | 16 | - |
| exon-exon | TVP23A | 16 | - | NUBP1 | 16 | - |
| exon-exon | TVP23A | 16 | - | NUBP1 | 16 | - |
| exon-exon | TVP23A | 16 | - | NUBP1 | 16 | - |
| intron-exon | TVP23C | 17 | - | CDRT4 | 17 | - |
| intron-exon | TVP23C | 17 | - | CDRT4 | 17 | - |
| intron-exon | TVP23C | 17 | - | CDRT4 | 17 | - |
| intron-exon | TVP23C | 17 | - | CDRT4 | 17 | - |
| exon-exon | TVP23C | 17 | - | CDRT4 | 17 | - |
| exon-exon | TVP23C | 17 | - | CDRT4 | 17 | - |
| exon-intron | TVP23C | 17 | - | TVP23C-CDRT4 | 17 | - |
| exon-exon | TVP23C | 17 | - | TVP23C-CDRT4 | 17 | - |
| exon-exon | TVP23C | 17 | - | TVP23C-CDRT4 | 17 | - |
| exon-intron | TVP23C | 17 | - | TVP23C-CDRT4 | 17 | - |
| exon-exon | TVP23C | 17 | - | TVP23C-CDRT4 | 17 | - |
| exon-intron | TVP23C | 17 | - | TVP23C-CDRT4 | 17 | - |
| exon-exon | TVP23C | 17 | - | TVP23C-CDRT4 | 17 | - |
| exon-exon | TVP23C | 17 | - | TVP23C-CDRT4 | 17 | - |
| exon-exon | TVP23C | 17 | - | TVP23C-CDRT4 | 17 | - |
| exon-exon | TVP23C | 17 | - | TVP23C-CDRT4 | 17 | - |
| exon-exon | TVP23C | 17 | - | TVP23C-CDRT4 | 17 | - |
| exon-exon | TVP23C | 17 | - | TVP23C-CDRT4 | 17 | - |
| exon-intron | TVP23C | 17 | - | TVP23C-CDRT4 | 17 | - |
| exon-exon | TVP23C | 17 | - | TVP23C-CDRT4 | 17 | - |
| exon-intron | TWF1 | 12 | + | TMEM117 | 12 | + |
| exon-exon | TWF2 | 3 | - | TLR9 | 3 | - |
| exon-exon | TXK | 4 | - | SFTPB | 2 | - |
| intron-exon | TXLNG | X | + | RBBP7 | X | + |
| intron-exon | TXNDC17 | 17 | + | MED31 | 17 | + |
| intron-exon | TXNDC17 | 17 | + | MED31 | 17 | + |
| exon-intron | TXNRD2 | 22 | + | RHBDD1 | 2 | - |
| exon-intron | TYK2 | 19 | - | RAVER1 | 19 | - |
| exon-exon | TYMS | 18 | + | ENOSF1 | 18 | + |
| intron-exon | TYMS | 18 | - | TYMSOS | 18 | - |
| exon-exon | TYMSOS | 18 | - | CLUL1 | 18 | - |
| exon-exon | TYSND1 | 10 | - | AIFM2 | 10 | - |
| exon-intron | TYSND1 | 10 | - | ANKRD11 | 16 | + |
| intron-exon | TYW1 | 7 | + | PMS2P4 | 7 | + |
| exon-exon | TYW3 | 1 | - | CRYZ | 1 | - |
| intron-exon | U2AF2 | 19 | + | VPS39 | 15 | - |
| exon-intron | UBA1 | X | + | LOC105373194 | X | + |
| exon-exon | UBA1 | X | + | LOC105373194 | X | + |
| exon-exon | UBA1 | X | - | NEAT1 | 11 | + |
| exon-intron | UBA52 | 19 | + | LOC105377703 | 5 | + |
| exon-exon | UBAC2-AS1 | 13 | + | UBAC2 | 13 | + |
| exon-intron | UBB | 17 | + | CMIP | 16 | - |
| exon-exon | UBC | 12 | - | UBA52 | 19 | + |
| exon-exon | UBD | 6 | + | RPS16 | 19 | + |
| exon-exon | UBE2CP5 | 19 | + | ZNF814 | 19 | + |
| exon-intron | UBE2CP5 | 19 | - | ZNF587 | 19 | - |
| exon-intron | UBE2D3 | 4 | - | NAV2 | 11 | - |
| exon-exon | UBE2D3 | 4 | - | UBE2D3P1 | 20 | - |
| exon-exon | UBE2D3 | 4 | - | UBE2D3P1 | 20 | - |
| exon-exon | UBE2D4 | 7 | + | HTRA2 | 2 | + |
| exon-intron | UBE2F | 2 | + | SCLY | 2 | + |
| exon-intron | UBE2F | 2 | + | SCLY | 2 | + |
| intron-exon | UBE2H | 7 | + | ND6 | MT | - |
| exon-exon | UBE2L6 | 11 | - | UBE2L6 | 11 | + |
| exon-exon | UBE2M | 19 | + | BRD4 | 19 | + |
| exon-intron | UBE2N | 12 | + | CDC25C | 5 | + |
| exon-intron | UBE2N | 12 | + | SPIDR | 8 | + |
| exon-intron | UBE2N | 12 | - | ASXL1 | 20 | + |
| intron-exon | UBE2Q2P2 | 15 | + | GOLGA6L9 | 15 | + |
| intron-exon | UBE2V2 | 8 | - | MCM4 | 8 | - |
| exon-intron | UBE2Z | 17 | + | SNF8 | 17 | + |
| exon-exon | UBE3A | 15 | - | PTP4A2 | 1 | + |
| exon-exon | UBE3B | 12 | - | KCTD10 | 12 | - |
| exon-exon | UBE3B | 12 | - | KCTD10 | 12 | - |
| exon-exon | UBE3B | 12 | - | KCTD10 | 12 | - |
| exon-intron | UBL5 | 19 | + | AC020687.1 | 15 | + |
| exon-exon | UBN2 | 7 | - | RPL37AP5 | 7 | - |
| exon-intron | UBN2 | 7 | - | TMEM41B | 11 | - |
| exon-intron | UBR4 | 1 | - | DGKZ | 11 | - |
| exon-intron | UBR4 | 1 | - | LOC102723795 | 7 | - |
| exon-intron | UBR5 | 8 | + | ALKBH5 | 17 | - |
| exon-exon | UBR5 | 8 | - | SDC4 | 20 | - |
| exon-exon | UBR5 | 8 | - | KMT2C | 7 | - |
| exon-exon | UBR7 | 14 | - | GON7 | 14 | - |
| intron-exon | UBTD1 | 10 | - | MMS19 | 10 | - |
| intron-exon | UBTD1 | 10 | - | MMS19 | 10 | - |
| intron-exon | UBTD1 | 10 | - | MMS19 | 10 | - |
| intron-exon | UBTD1 | 10 | - | MMS19 | 10 | - |
| exon-intron | UBTF | 17 | - | LOC105374370 | 4 | - |
| intron-exon | UCHL1-AS1 | 4 | + | UCHL1 | 4 | + |
| exon-exon | UCK2 | 1 | + | FAM78B-AS1 | 1 | + |
| exon-exon | UCK2 | 1 | - | TMCO1 | 1 | - |
| exon-intron | UCK2 | 1 | - | TMCO1 | 1 | - |
| exon-exon | UEVLD | 11 | + | EDEM1 | 3 | + |
| intron-exon | UFC1 | 1 | - | DEDD | 1 | - |
| exon-intron | UFM1 | 13 | - | ACACA | 17 | - |
| exon-intron | UFSP2 | 4 | + | C4orf47 | 4 | + |
| exon-intron | UFSP2 | 4 | + | C4orf47 | 4 | + |
| exon-intron | UFSP2 | 4 | + | C4orf47 | 4 | + |
| exon-intron | UFSP2 | 4 | + | C4orf47 | 4 | + |
| exon-intron | UFSP2 | 4 | + | C4orf47 | 4 | + |
| exon-intron | UFSP2 | 4 | + | C4orf47 | 4 | + |
| exon-intron | UFSP2 | 4 | + | C4orf47 | 4 | + |
| exon-exon | UFSP2 | 4 | - | ANKRD37 | 4 | - |
| exon-exon | UFSP2 | 4 | - | ANKRD37 | 4 | - |
| exon-exon | UFSP2 | 4 | - | ANKRD37 | 4 | - |
| exon-exon | UFSP2 | 4 | - | ANKRD37 | 4 | - |
| exon-exon | UFSP2 | 4 | - | ANKRD37 | 4 | - |
| exon-exon | UFSP2 | 4 | - | ANKRD37 | 4 | - |
| exon-exon | UFSP2 | 4 | - | ANKRD37 | 4 | - |
| exon-exon | UFSP2 | 4 | - | ANKRD37 | 4 | - |
| exon-exon | UFSP2 | 4 | - | ANKRD37 | 4 | - |
| exon-exon | UFSP2 | 4 | - | ANKRD37 | 4 | - |
| exon-exon | UFSP2 | 4 | - | ANKRD37 | 4 | - |
| exon-exon | UGDH-AS1 | 4 | - | UGDH | 4 | - |
| exon-exon | UGDH-AS1 | 4 | - | UGDH | 4 | - |
| exon-exon | UGDH-AS1 | 4 | - | UGDH | 4 | - |
| exon-exon | UGT1A6 | 2 | - | UGT1A8 | 2 | - |
| exon-exon | UGT1A8 | 2 | + | UGT1A6 | 2 | + |
| exon-intron | UGT2B7 | 4 | - | MMP12 | 11 | - |
| exon-exon | UHRF1BP1 | 6 | + | TAF11 | 6 | + |
| intron-exon | UHRF1BP1L | 12 | + | PRPF38B | 1 | - |
| exon-intron | UHRF1BP1L | 12 | - | POM121L7P | 22 | - |
| exon-exon | UHRF1BP1L | 12 | - | PXK | 3 | + |
| exon-intron | UNC5CL | 6 | + | OARD1 | 6 | + |
| intron-exon | UNK | 17 | - | H3-3B | 17 | - |
| intron-exon | UNK | 17 | - | H3-3B | 17 | - |
| intron-exon | UNK | 17 | - | H3-3B | 17 | - |
| exon-exon | UNKL | 16 | - | GNPTG | 16 | - |
| intron-exon | UNKL | 16 | - | PANX2 | 22 | + |
| exon-exon | UPF2 | 10 | - | ZDHHC2 | 8 | + |
| exon-intron | UPF3B | X | + | AC024563.1 | 19 | - |
| exon-intron | UPK1B | 3 | - | RASAL2 | 1 | - |
| exon-intron | UPK3B | 7 | + | AC004980.3 | 7 | + |
| intron-exon | UQCC1 | 20 | + | CEP250 | 20 | + |
| exon-exon | UQCC3 | 11 | - | SF3B1 | 2 | + |
| exon-exon | UQCR11 | 19 | - | MBD3 | 19 | - |
| intron-exon | UQCRB | 8 | + | LOC101927039 | 8 | + |
| intron-exon | UQCRB | 8 | + | LOC101927039 | 8 | + |
| exon-exon | UQCRH | 1 | + | CLTA | 9 | + |
| exon-exon | UQCRHL | 1 | - | RHOC | 1 | - |
| exon-intron | UQCRQ | 5 | + | SLC30A10 | 1 | - |
| exon-exon | URAHP | 16 | - | GAS8 | 16 | - |
| exon-exon | URAHP | 16 | - | GAS8 | 16 | - |
| exon-exon | URAHP | 16 | - | GAS8 | 16 | - |
| exon-exon | URAHP | 16 | - | GAS8 | 16 | - |
| exon-exon | URAHP | 16 | - | GAS8 | 16 | - |
| exon-exon | URGCP | 7 | - | MRPS24 | 7 | - |
| exon-exon | URGCP | 7 | - | MRPS24 | 7 | - |
| exon-exon | URGCP-MRPS24 | 7 | + | URGCP | 7 | + |
| exon-exon | URI1 | 19 | - | TPM4 | 19 | - |
| exon-exon | USB1 | 16 | - | NAA40 | 11 | - |
| exon-intron | USE1 | 19 | + | LOC105370128 | 13 | + |
| exon-exon | USF3 | 3 | - | E2F4 | 16 | + |
| exon-exon | USHBP1 | 19 | - | NR2F6 | 19 | - |
| exon-intron | USO1 | 4 | + | LOC101929418 | 2 | - |
| exon-exon | USO1 | 4 | - | G3BP2 | 4 | - |
| exon-intron | USO1 | 4 | - | G3BP2 | 4 | - |
| exon-exon | USP11 | X | - | USP11 | X | + |
| intron-exon | USP14 | 18 | + | LOC101927143 | 1 | - |
| exon-intron | USP19 | 3 | - | QARS1 | 3 | - |
| intron-exon | USP2-AS1 | 11 | + | OAZ2 | 15 | + |
| exon-exon | USP3 | 15 | + | USP3-AS1 | 15 | + |
| intron-exon | USP3-AS1 | 15 | + | FBXL22 | 15 | + |
| intron-exon | USP3-AS1 | 15 | - | USP3 | 15 | - |
| intron-exon | USP32 | 17 | + | PPM1D | 17 | + |
| intron-exon | USP32 | 17 | - | USP6 | 17 | + |
| exon-exon | USP35 | 11 | + | ATAD3A | 1 | + |
| intron-exon | USP39 | 2 | + | C2orf68 | 2 | - |
| intron-exon | USP39 | 2 | + | C2orf68 | 2 | - |
| intron-exon | USP39 | 2 | + | C2orf68 | 2 | - |
| intron-exon | USP39 | 2 | - | TGOLN2 | 2 | - |
| intron-exon | USP39 | 2 | - | TGOLN2 | 2 | - |
| exon-exon | USP45 | 6 | - | PNISR | 6 | - |
| intron-exon | USP46 | 4 | + | USP46-DT | 4 | + |
| exon-exon | USP46 | 4 | - | CCNI | 4 | + |
| exon-exon | USP47 | 11 | + | ANAPC4 | 4 | - |
| exon-exon | USP47 | 11 | + | ANAPC4 | 4 | - |
| exon-intron | USP47 | 11 | + | LRRC29 | 16 | - |
| exon-intron | USP54 | 10 | - | WWTR1 | 3 | + |
| exon-intron | USP54 | 10 | - | AP1M2 | 19 | + |
| exon-exon | USP6NL | 10 | - | SPIN1 | 9 | + |
| exon-exon | USP8 | 15 | + | USP50 | 15 | + |
| exon-exon | USP8P1 | 6 | + | RPL3P2 | 6 | + |
| exon-exon | USP8P1 | 6 | + | RPL3P2 | 6 | + |
| exon-exon | USPL1 | 13 | - | HMGB1 | 13 | - |
| intron-exon | USPL1 | 13 | - | HMGB1 | 13 | - |
| intron-exon | USPL1 | 13 | - | HMGB1 | 13 | - |
| exon-exon | UTP23 | 8 | + | LOC112268030 | 8 | + |
| exon-exon | UTP23 | 8 | + | LOC112268030 | 8 | + |
| intron-exon | UTP23 | 8 | - | EIF3H | 8 | - |
| exon-intron | UTP4 | 16 | + | SNTB2 | 16 | + |
| intron-exon | UTS2B | 3 | + | CCDC50 | 3 | + |
| exon-intron | UXT-AS1 | X | - | SSX7 | X | + |
| intron-exon | VAC14 | 16 | + | VAC14-AS1 | 16 | + |
| exon-intron | VAC14 | 16 | + | VAC14-AS1 | 16 | + |
| exon-exon | VAMP1 | 12 | - | TAPBPL | 12 | - |
| intron-exon | VAMP1 | 12 | - | TAPBPL | 12 | - |
| exon-exon | VAMP5 | 2 | - | VAMP8 | 2 | - |
| exon-exon | VAMP5 | 2 | - | VAMP8 | 2 | - |
| exon-exon | VAMP5 | 2 | - | VAMP8 | 2 | - |
| exon-intron | VAMP8 | 2 | + | VAMP5 | 2 | + |
| exon-intron | VASH1 | 14 | + | ANGEL1 | 14 | + |
| exon-exon | VASH1 | 14 | + | ANGEL1 | 14 | + |
| intron-exon | VAT1 | 17 | - | BRI3 | 7 | - |
| intron-exon | VAV3-AS1 | 1 | - | VAV3 | 1 | - |
| exon-intron | VCL | 10 | - | LINC02021 | 3 | - |
| exon-exon | VCP | 9 | + | VCP | 9 | - |
| exon-intron | VDAC1 | 5 | - | PAIP2 | 5 | + |
| exon-exon | VDAC1 | 5 | - | PPIA | 7 | + |
| intron-exon | VEGFC | 4 | - | LOC105377555 | 4 | - |
| exon-intron | VEGFC | 4 | - | LOC105377555 | 4 | - |
| intron-exon | VEPH1 | 3 | + | PTX3 | 3 | + |
| exon-exon | VEZT | 12 | + | NRAV | 12 | - |
| exon-intron | VHL | 3 | + | LOC107303340 | 3 | + |
| exon-exon | VHL | 3 | - | BRK1 | 3 | - |
| exon-intron | VHL | 3 | - | KANSL1L-AS1 | 2 | + |
| exon-exon | VIL1 | 2 | - | VIL1 | 2 | + |
| exon-intron | VIM | 10 | + | P2RX1 | 17 | - |
| exon-intron | VIM | 10 | + | PDK1 | 2 | - |
| intron-exon | VIPR1-AS1 | 3 | - | VIPR1 | 3 | - |
| intron-exon | VIPR1-AS1 | 3 | - | VIPR1 | 3 | - |
| intron-exon | VIRMA | 8 | - | NAA16 | 13 | - |
| exon-exon | VKORC1 | 16 | - | PRSS53 | 16 | - |
| exon-exon | VKORC1 | 16 | - | PRSS53 | 16 | - |
| exon-exon | VKORC1 | 16 | - | PRSS53 | 16 | - |
| exon-exon | VLDLR | 9 | + | LOC105375957 | 9 | + |
| exon-exon | VLDLR | 9 | - | VLDLR-AS1 | 9 | - |
| exon-exon | VN1R1 | 19 | + | ZNF772 | 19 | + |
| intron-exon | VN1R105P | 19 | + | LILRB4 | 19 | + |
| exon-exon | VPS13A-AS1 | 9 | + | VPS13A | 9 | + |
| intron-exon | VPS13B | 8 | + | CASTOR1 | 22 | + |
| intron-exon | VPS28 | 8 | + | TONSL-AS1 | 8 | + |
| exon-exon | VPS29 | 12 | + | VPS29 | 12 | - |
| intron-exon | VPS35L | 16 | - | ATF4 | 22 | - |
| exon-intron | VPS4B | 18 | - | ENPP3 | 6 | + |
| exon-exon | VPS53 | 17 | + | VPS53 | 17 | - |
| intron-exon | VPS9D1 | 16 | + | VPS9D1-AS1 | 16 | + |
| exon-exon | VPS9D1 | 16 | + | ZNF276 | 16 | + |
| intron-exon | VSIG10 | 12 | + | LOC101928274 | 12 | + |
| intron-exon | VSIG8 | 1 | - | SNHG28 | 1 | - |
| exon-exon | VSNL1 | 2 | - | BTBD9 | 6 | + |
| exon-intron | VTA1 | 6 | + | INPP5J | 22 | + |
| exon-intron | VTI1B | 14 | - | GPHN | 14 | - |
| exon-intron | VTI1B | 14 | - | GPHN | 14 | - |
| exon-intron | VTI1B | 14 | - | GPHN | 14 | - |
| exon-intron | VTI1B | 14 | - | GPHN | 14 | - |
| exon-intron | VTI1B | 14 | - | GPHN | 14 | - |
| exon-intron | VTI1B | 14 | - | GPHN | 14 | - |
| exon-intron | VTI1B | 14 | - | GPHN | 14 | - |
| exon-intron | VTI1B | 14 | - | GPHN | 14 | - |
| exon-intron | VTI1B | 14 | - | GPHN | 14 | - |
| exon-intron | VWA7 | 6 | - | MSH5-SAPCD1 | 6 | - |
| exon-intron | VWA7 | 6 | - | MSH5-SAPCD1 | 6 | - |
| exon-intron | VXN | 8 | - | AC009879.3 | 8 | - |
| exon-intron | VXN | 8 | - | ADHFE1 | 8 | - |
| intron-exon | WAKMAR2 | 6 | + | DOCK6 | 19 | + |
| intron-exon | WAPL | 10 | - | ZCCHC4 | 4 | + |
| exon-exon | WARS1 | 14 | - | WARS1 | 14 | + |
| exon-exon | WASF2 | 1 | + | WASF2 | 1 | - |
| exon-exon | WASH4P | 16 | + | LOC102723655 | 16 | + |
| exon-intron | WASH9P | 1 | - | LOC102724250 | 1 | - |
| exon-intron | WASH9P | 1 | - | LOC102724250 | 1 | - |
| exon-intron | WASH9P | 1 | - | LOC102724250 | 1 | - |
| exon-intron | WASH9P | 1 | - | LOC102724250 | 1 | - |
| exon-intron | WASH9P | 1 | - | LOC102724250 | 1 | - |
| exon-intron | WASH9P | 1 | - | LOC102724250 | 1 | - |
| exon-intron | WASH9P | 1 | - | LOC102724250 | 1 | - |
| exon-intron | WASH9P | 1 | - | LOC102724250 | 1 | - |
| exon-intron | WASH9P | 1 | - | LOC102724250 | 1 | - |
| exon-intron | WASH9P | 1 | - | LOC102724250 | 1 | - |
| exon-intron | WASH9P | 1 | - | LOC102724250 | 1 | - |
| exon-intron | WASH9P | 1 | - | LOC102724250 | 1 | - |
| exon-intron | WASH9P | 1 | - | LOC102724250 | 1 | - |
| exon-exon | WASHC1 | 9 | - | WASH3P | 15 | + |
| intron-exon | WASHC4 | 12 | + | ARHGDIB | 12 | - |
| exon-exon | WASHC4 | 12 | - | VPS41 | 7 | + |
| exon-intron | WDCP | 2 | + | FKBP1B | 2 | + |
| exon-exon | WDFY1 | 2 | - | AP1S3 | 2 | - |
| intron-exon | WDR20 | 14 | + | MOK | 14 | + |
| exon-exon | WDR25 | 14 | - | WARS1 | 14 | - |
| exon-exon | WDR25 | 14 | - | WARS1 | 14 | - |
| exon-exon | WDR25 | 14 | - | WARS1 | 14 | - |
| intron-exon | WDR33 | 2 | + | UGGT1 | 2 | + |
| exon-intron | WDR33 | 2 | - | BRD2 | 6 | - |
| exon-exon | WDR34 | 9 | - | SPTAN1 | 9 | - |
| exon-intron | WDR37 | 10 | - | IDI1 | 10 | - |
| intron-exon | WDR38 | 9 | + | RPL35 | 9 | + |
| intron-exon | WDR38 | 9 | + | RPL35 | 9 | + |
| exon-exon | WDR4 | 21 | + | LOC105372817 | 21 | + |
| exon-exon | WDR45 | X | - | PRAF2 | X | - |
| exon-exon | WDR46 | 6 | - | B3GALT4 | 6 | - |
| exon-exon | WDR49 | 3 | - | SERPINI2 | 3 | - |
| exon-intron | WDR49 | 3 | - | SERPINI2 | 3 | - |
| exon-intron | WDR49 | 3 | - | SERPINI2 | 3 | - |
| exon-exon | WDR49 | 3 | - | SERPINI2 | 3 | - |
| exon-exon | WDR53 | 3 | - | CKMT2-AS1 | 5 | - |
| exon-exon | WDR6 | 3 | + | DALRD3 | 3 | + |
| exon-exon | WDR6 | 3 | + | DALRD3 | 3 | + |
| exon-exon | WDR7-OT1 | 18 | + | LOC105372136 | 18 | + |
| intron-exon | WDR70 | 5 | - | CASP8AP2 | 6 | + |
| exon-exon | WDR73 | 15 | - | SCAND2P | 15 | - |
| exon-exon | WDR77 | 1 | + | ATP5PB | 1 | + |
| exon-intron | WDR77 | 1 | - | AL390195.1 | 1 | - |
| exon-exon | WDR82 | 3 | - | IREB2 | 15 | + |
| intron-exon | WDR83 | 19 | + | DHPS | 19 | + |
| exon-exon | WDR83OS | 19 | - | MAN2B1 | 19 | - |
| exon-intron | WDR86 | 7 | + | WDR86-AS1 | 7 | + |
| exon-intron | WDR86 | 7 | + | WDR86-AS1 | 7 | + |
| exon-intron | WDR86 | 7 | - | NUB1 | 7 | - |
| intron-exon | WDR93 | 15 | - | PEX11A | 15 | - |
| intron-exon | WDR93 | 15 | - | PEX11A | 15 | - |
| intron-exon | WDR93 | 15 | - | PEX11A | 15 | - |
| intron-exon | WDR93 | 15 | - | PEX11A | 15 | - |
| exon-exon | WDTC1 | 1 | - | NCBP2 | 3 | - |
| intron-exon | WFDC10B | 20 | + | WFDC13 | 20 | + |
| exon-intron | WHAMMP1 | 15 | - | LOC107987222 | 15 | - |
| exon-intron | WI2-87327B8.2 | 20 | - | BX640514.2 | 20 | - |
| exon-exon | WIPI1 | 17 | - | ARSG | 17 | - |
| exon-exon | WNT11 | 11 | + | LOC112268079 | 11 | + |
| exon-intron | WNT2 | 7 | + | LOC105375467 | 7 | + |
| exon-intron | WNT2 | 7 | + | LOC105375467 | 7 | + |
| exon-intron | WNT2 | 7 | + | LOC105375467 | 7 | + |
| exon-intron | WNT2 | 7 | + | LOC105375467 | 7 | + |
| exon-intron | WNT2 | 7 | + | LOC105375467 | 7 | + |
| exon-exon | WRAP53 | 17 | - | TP53 | 17 | - |
| exon-exon | WRAP53 | 17 | - | TP53 | 17 | - |
| exon-exon | WSB2 | 12 | - | RFC5 | 12 | - |
| exon-exon | WSB2 | 12 | - | RFC5 | 12 | - |
| intron-exon | WWOX | 16 | - | WWOX-AS1 | 16 | - |
| intron-exon | WWOX | 16 | - | GAPDH | 12 | - |
| exon-intron | XGY2 | Y | + | LOC108178989 | Y | + |
| intron-exon | XKR4 | 8 | + | ATP6 | MT | + |
| intron-exon | XPA | 9 | - | NCBP1 | 9 | - |
| intron-exon | XPO1 | 2 | - | LOC105377633 | 2 | - |
| intron-exon | XPR1 | 1 | + | TYK2 | 19 | - |
| exon-exon | XPR1 | 1 | + | KIAA1614 | 1 | + |
| exon-intron | XPR1 | 1 | + | LOC105379051 | 5 | - |
| exon-intron | XPR1 | 1 | + | BRAF | 7 | + |
| intron-exon | XRCC3 | 14 | - | KLC1 | 14 | - |
| intron-exon | XRCC3 | 14 | - | KLC1 | 14 | - |
| intron-exon | XRCC3 | 14 | - | KLC1 | 14 | - |
| intron-exon | XRCC3 | 14 | - | KLC1 | 14 | - |
| intron-exon | XRCC3 | 14 | - | KLC1 | 14 | - |
| intron-exon | XRCC3 | 14 | - | KLC1 | 14 | - |
| intron-exon | XRCC3 | 14 | - | KLC1 | 14 | - |
| intron-exon | XRCC3 | 14 | - | KLC1 | 14 | - |
| intron-exon | XRCC3 | 14 | - | KLC1 | 14 | - |
| intron-exon | XRCC3 | 14 | - | KLC1 | 14 | - |
| intron-exon | XRCC3 | 14 | - | KLC1 | 14 | - |
| intron-exon | XRCC3 | 14 | - | KLC1 | 14 | - |
| intron-exon | XRCC3 | 14 | - | KLC1 | 14 | - |
| exon-intron | XRCC3 | 14 | - | KLC1 | 14 | - |
| exon-exon | XRCC4 | 5 | - | TMEM167A | 5 | - |
| exon-exon | XRCC4 | 5 | - | TMEM167A | 5 | - |
| exon-exon | XRCC4 | 5 | - | LOC100129118 | 19 | + |
| exon-exon | XRCC4 | 5 | - | TMEM167A | 5 | - |
| exon-exon | XRCC4 | 5 | - | TMEM167A | 5 | - |
| exon-exon | XRCC4 | 5 | - | TMEM167A | 5 | - |
| exon-exon | XRCC4 | 5 | - | TMEM167A | 5 | - |
| exon-exon | XRCC4 | 5 | - | TMEM167A | 5 | - |
| exon-exon | XRCC4 | 5 | - | TMEM167A | 5 | - |
| exon-exon | XRCC4 | 5 | - | TMEM167A | 5 | - |
| exon-exon | XRCC4 | 5 | - | TMEM167A | 5 | - |
| exon-exon | XRCC4 | 5 | - | TMEM167A | 5 | - |
| exon-exon | XRCC4 | 5 | - | TMEM167A | 5 | - |
| exon-exon | XRCC4 | 5 | - | TMEM167A | 5 | - |
| exon-exon | XRCC4 | 5 | - | TMEM167A | 5 | - |
| exon-exon | XRCC4 | 5 | - | TMEM167A | 5 | - |
| exon-exon | XRCC4 | 5 | - | TMEM167A | 5 | - |
| exon-exon | XRCC4 | 5 | - | TMEM167A | 5 | - |
| exon-exon | XRCC4 | 5 | - | TMEM167A | 5 | - |
| exon-exon | XRCC4 | 5 | - | TMEM167A | 5 | - |
| exon-exon | XRCC4 | 5 | - | TMEM167A | 5 | - |
| intron-exon | XRCC4 | 5 | - | TMEM167A | 5 | - |
| exon-exon | XRCC6 | 22 | + | SLC29A1 | 6 | - |
| exon-exon | XRN1 | 3 | - | GNPTAB | 12 | - |
| intron-exon | XRRA1 | 11 | - | CCAR2 | 8 | + |
| intron-exon | YAP1 | 11 | - | PSMD5 | 9 | - |
| intron-exon | YARS2 | 12 | - | DNM1L | 12 | - |
| intron-exon | YARS2 | 12 | - | DNM1L | 12 | - |
| exon-exon | YIF1B | 19 | + | C19orf33 | 19 | + |
| exon-intron | YIF1B | 19 | - | SPINT2 | 19 | - |
| exon-exon | YIPF2 | 19 | - | CARM1 | 19 | - |
| exon-intron | YIPF4 | 2 | + | BIRC6 | 2 | + |
| exon-intron | YIPF7 | 4 | + | GUF1 | 4 | + |
| exon-exon | YLPM1 | 14 | + | YLPM1 | 14 | - |
| exon-exon | YLPM1 | 14 | + | PROX2 | 14 | + |
| exon-exon | YOD1 | 1 | + | PFKFB2 | 1 | + |
| exon-exon | YPEL1 | 22 | - | PPIL2 | 22 | - |
| intron-exon | YPEL4 | 11 | + | CLP1 | 11 | + |
| exon-exon | YWHAB | 20 | + | GJA1 | 6 | + |
| exon-intron | YWHAB | 20 | + | GPI | 19 | - |
| exon-intron | YWHAB | 20 | + | MLLT1 | 19 | + |
| exon-intron | YWHAG | 7 | - | AMBRA1 | 11 | + |
| intron-exon | YWHAH | 22 | - | C22orf24 | 22 | - |
| exon-intron | YWHAQ | 2 | - | EFCAB6 | 22 | + |
| exon-intron | YWHAQ | 2 | - | ENPP3 | 6 | - |
| exon-intron | YWHAZ | 8 | - | CASK | X | - |
| exon-exon | YY1AP1 | 1 | + | DAP3 | 1 | + |
| intron-exon | Z82188.2 | 22 | + | C1QTNF6 | 22 | + |
| exon-intron | ZADH2 | 18 | - | AP2B1 | 17 | + |
| exon-intron | ZBED4 | 22 | + | ALG12 | 22 | + |
| exon-exon | ZBED4 | 22 | + | DCTN1 | 2 | - |
| exon-exon | ZBED5 | 11 | - | EIF4G2 | 11 | - |
| exon-exon | ZBTB11-AS1 | 3 | - | ZBTB11 | 3 | - |
| exon-exon | ZBTB11-AS1 | 3 | - | ZBTB11 | 3 | - |
| exon-exon | ZBTB11-AS1 | 3 | - | ZBTB11 | 3 | - |
| exon-exon | ZBTB11-AS1 | 3 | - | ZBTB11 | 3 | - |
| exon-intron | ZBTB16 | 11 | + | IPPK | 9 | + |
| exon-exon | ZBTB17 | 1 | - | SPEN | 1 | - |
| exon-intron | ZBTB20 | 3 | + | ZBTB20-AS1 | 3 | + |
| exon-intron | ZBTB20 | 3 | + | ZBTB20-AS5 | 3 | + |
| exon-intron | ZBTB20 | 3 | - | LOC101927583 | 12 | - |
| exon-intron | ZBTB22 | 6 | - | TAPBP | 6 | - |
| exon-exon | ZBTB25 | 14 | + | ZBTB1 | 14 | + |
| intron-exon | ZBTB25 | 14 | + | ZBTB1 | 14 | + |
| intron-exon | ZBTB25 | 14 | - | MTHFD1 | 14 | - |
| intron-exon | ZBTB25 | 14 | - | MTHFD1 | 14 | - |
| intron-exon | ZBTB25 | 14 | - | MTHFD1 | 14 | - |
| intron-exon | ZBTB25 | 14 | - | MTHFD1 | 14 | - |
| intron-exon | ZBTB25 | 14 | - | MTHFD1 | 14 | - |
| intron-exon | ZBTB25 | 14 | - | MTHFD1 | 14 | - |
| intron-exon | ZBTB25 | 14 | - | MTHFD1 | 14 | - |
| intron-exon | ZBTB25 | 14 | - | MTHFD1 | 14 | - |
| intron-exon | ZBTB25 | 14 | - | MTHFD1 | 14 | - |
| intron-exon | ZBTB25 | 14 | - | MTHFD1 | 14 | - |
| intron-exon | ZBTB25 | 14 | - | MTHFD1 | 14 | - |
| intron-exon | ZBTB25 | 14 | - | GDI1 | X | - |
| exon-intron | ZBTB37 | 1 | - | GAS5 | 1 | - |
| exon-exon | ZBTB4 | 17 | + | ZBTB4 | 17 | - |
| exon-intron | ZBTB44 | 11 | + | ZBTB44-DT | 11 | + |
| exon-intron | ZBTB44 | 11 | - | RASSF3 | 12 | - |
| exon-intron | ZBTB7A | 19 | - | LINC02099 | 8 | + |
| exon-intron | ZBTB8OS | 1 | - | LOC105378260 | 21 | - |
| exon-exon | ZC3H10 | 12 | + | ESYT1 | 12 | + |
| exon-exon | ZC3H12D | 6 | + | PRKDC | 8 | - |
| exon-exon | ZC3H12D | 6 | + | PRKDC | 8 | - |
| exon-exon | ZC3H13 | 13 | + | CPB2-AS1 | 13 | + |
| exon-intron | ZC3H18 | 16 | + | ITGB6 | 2 | + |
| exon-exon | ZC3H4 | 19 | + | ZC3H4 | 19 | - |
| exon-intron | ZC3H4 | 19 | + | SAE1 | 19 | + |
| exon-intron | ZC3H4 | 19 | + | SAE1 | 19 | + |
| exon-exon | ZC3H8 | 2 | - | FBLN7 | 2 | - |
| exon-exon | ZC3H8 | 2 | - | FBLN7 | 2 | - |
| exon-intron | ZCCHC3 | 20 | - | NFATC3 | 16 | + |
| exon-exon | ZDHHC11 | 5 | - | ZDHHC11B | 5 | - |
| exon-exon | ZDHHC11 | 5 | - | ZDHHC11B | 5 | - |
| intron-exon | ZDHHC20 | 13 | - | MIPEPP3 | 13 | - |
| intron-exon | ZDHHC20 | 13 | - | MIPEPP3 | 13 | - |
| intron-exon | ZDHHC20 | 13 | - | MIPEPP3 | 13 | - |
| intron-exon | ZDHHC20 | 13 | - | MIPEPP3 | 13 | - |
| intron-exon | ZDHHC24 | 11 | - | BBS1 | 11 | - |
| intron-exon | ZDHHC24 | 11 | - | BBS1 | 11 | - |
| intron-exon | ZDHHC24 | 11 | - | BBS1 | 11 | - |
| intron-exon | ZDHHC24 | 11 | - | BBS1 | 11 | - |
| intron-exon | ZDHHC6 | 10 | - | ACSL5 | 10 | - |
| intron-exon | ZDHHC6 | 10 | - | ACSL5 | 10 | - |
| intron-exon | ZDHHC6 | 10 | - | ACSL5 | 10 | - |
| intron-exon | ZDHHC6 | 10 | - | ACSL5 | 10 | - |
| intron-exon | ZDHHC6 | 10 | - | ACSL5 | 10 | - |
| intron-exon | ZDHHC6 | 10 | - | ACSL5 | 10 | - |
| intron-exon | ZDHHC6 | 10 | - | ACSL5 | 10 | - |
| intron-exon | ZDHHC6 | 10 | - | ACSL5 | 10 | - |
| intron-exon | ZDHHC6 | 10 | - | ACSL5 | 10 | - |
| intron-exon | ZDHHC6 | 10 | - | ACSL5 | 10 | - |
| intron-exon | ZDHHC6 | 10 | - | ACSL5 | 10 | - |
| intron-exon | ZDHHC6 | 10 | - | ACSL5 | 10 | - |
| exon-intron | ZDHHC6 | 10 | - | LINC01894 | 18 | + |
| intron-exon | ZEB1 | 10 | - | ZNF292 | 6 | + |
| intron-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| intron-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| intron-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| intron-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| intron-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| intron-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| exon-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| intron-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| intron-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| intron-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| intron-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| exon-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| intron-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| exon-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| exon-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| exon-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| exon-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| intron-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| exon-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| exon-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| exon-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| exon-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| exon-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| exon-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| intron-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| intron-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| intron-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| intron-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| intron-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| intron-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| intron-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| intron-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| intron-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| intron-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| exon-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| intron-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| intron-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| intron-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| intron-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| intron-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| intron-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| intron-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| intron-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| intron-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| intron-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| intron-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| exon-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| exon-exon | ZEB2-AS1 | 2 | - | ZEB2 | 2 | - |
| intron-exon | ZER1 | 9 | - | LOC100506100 | 9 | - |
| intron-exon | ZER1 | 9 | - | LOC100506100 | 9 | - |
| exon-exon | ZFAND2B | 2 | - | ZFAND2B | 2 | + |
| exon-exon | ZFAND2B | 2 | - | ZFAND2B | 2 | + |
| exon-exon | ZFAND2B | 2 | - | ZFAND2B | 2 | + |
| exon-intron | ZFAND3 | 6 | - | BMPR1A | 10 | + |
| exon-exon | ZFAND5 | 9 | + | ZFAND5 | 9 | - |
| exon-exon | ZFAS1 | 20 | - | RPS16 | 19 | - |
| intron-exon | ZFAT | 8 | + | ZEB1 | 10 | - |
| exon-exon | ZFP30 | 19 | + | ZNF781 | 19 | + |
| exon-exon | ZFP30 | 19 | + | ZNF781 | 19 | + |
| exon-exon | ZFP36L1 | 14 | + | LARP1 | 5 | + |
| exon-intron | ZFP36L2 | 2 | - | AC010883.3 | 2 | - |
| intron-exon | ZFP90 | 16 | + | ZNF500 | 16 | - |
| exon-exon | ZFP91 | 11 | + | CNTF | 11 | + |
| exon-exon | ZFP91-CNTF | 11 | - | RGPD1 | 2 | - |
| exon-intron | ZFPM2 | 8 | + | LOC105375694 | 8 | + |
| intron-exon | ZFPM2-AS1 | 8 | - | ZFPM2 | 8 | - |
| exon-intron | ZFYVE16 | 5 | + | AC008771.1 | 5 | + |
| exon-intron | ZFYVE16 | 5 | + | AC008771.1 | 5 | + |
| exon-exon | ZFYVE19 | 15 | - | DNAJC17 | 15 | - |
| exon-exon | ZFYVE21 | 14 | - | RERE | 1 | + |
| exon-exon | ZFYVE9 | 1 | + | CC2D1B | 1 | + |
| exon-intron | ZFYVE9 | 1 | + | NTMT1 | 9 | + |
| exon-exon | ZGLP1 | 19 | + | FDX2 | 19 | + |
| exon-exon | ZHX1 | 8 | - | C8orf76 | 8 | - |
| exon-intron | ZHX1 | 8 | - | C8orf76 | 8 | - |
| exon-intron | ZHX1 | 8 | - | ZHX1-C8orf76 | 8 | - |
| exon-intron | ZHX1 | 8 | - | ZHX1-C8orf76 | 8 | - |
| exon-intron | ZHX1 | 8 | - | ZHX1-C8orf76 | 8 | - |
| exon-intron | ZHX1 | 8 | - | ZHX1-C8orf76 | 8 | - |
| exon-intron | ZHX1 | 8 | - | ZHX1-C8orf76 | 8 | - |
| exon-intron | ZHX1 | 8 | - | ZHX1-C8orf76 | 8 | - |
| exon-intron | ZHX1 | 8 | - | ZHX1-C8orf76 | 8 | - |
| exon-intron | ZHX1 | 8 | - | ZHX1-C8orf76 | 8 | - |
| exon-intron | ZHX1 | 8 | - | ZHX1-C8orf76 | 8 | - |
| exon-intron | ZHX1 | 8 | - | ZHX1-C8orf76 | 8 | - |
| exon-intron | ZHX1 | 8 | - | ZHX1-C8orf76 | 8 | - |
| exon-intron | ZHX1 | 8 | - | ZHX1-C8orf76 | 8 | - |
| exon-intron | ZHX1 | 8 | - | ZHX1-C8orf76 | 8 | - |
| exon-exon | ZHX1-C8orf76 | 8 | + | ZHX1-C8orf76 | 8 | + |
| exon-exon | ZHX1-C8orf76 | 8 | + | ZHX1-C8orf76 | 8 | + |
| intron-exon | ZIM2 | 19 | + | PEG3-AS1 | 19 | + |
| intron-exon | ZIM2 | 19 | + | PEG3-AS1 | 19 | + |
| exon-intron | ZKSCAN1 | 7 | - | ARHGAP28 | 18 | + |
| exon-intron | ZKSCAN7 | 3 | + | ZNF660-ZNF197 | 3 | + |
| intron-exon | ZKSCAN7 | 3 | + | ZNF660-ZNF197 | 3 | + |
| intron-exon | ZKSCAN7-AS1 | 3 | + | ZNF660-ZNF197 | 3 | + |
| intron-exon | ZKSCAN7-AS1 | 3 | + | ZNF35 | 3 | + |
| intron-exon | ZKSCAN7-AS1 | 3 | - | ZNF23 | 16 | + |
| intron-exon | ZKSCAN7-AS1 | 3 | - | ZKSCAN7 | 3 | - |
| exon-exon | ZMAT2 | 5 | - | HARS2 | 5 | - |
| exon-intron | ZMIZ1 | 10 | - | ZMIZ1-AS1 | 10 | - |
| exon-exon | ZMIZ2 | 7 | - | RTRAF | 14 | + |
| exon-intron | ZMYM1 | 1 | - | GPC6 | 13 | - |
| exon-intron | ZMYM5 | 13 | + | IFT88 | 13 | + |
| intron-exon | ZMYM6 | 1 | - | TMEM35B | 1 | - |
| exon-exon | ZMYND11 | 10 | + | ZFAND4 | 10 | - |
| exon-exon | ZMYND11 | 10 | + | ZFAND4 | 10 | - |
| exon-exon | ZMYND11 | 10 | + | ZFAND4 | 10 | - |
| exon-exon | ZMYND11 | 10 | + | ZFAND4 | 10 | - |
| intron-exon | ZMYND11 | 10 | - | SPTSSB | 3 | + |
| intron-exon | ZMYND8 | 20 | - | ZNF426 | 19 | - |
| exon-exon | ZNF10 | 12 | + | ZNF268 | 12 | + |
| exon-intron | ZNF124 | 1 | + | ELMO1 | 7 | + |
| exon-exon | ZNF131 | 5 | - | LOC100506639 | 5 | - |
| intron-exon | ZNF131 | 5 | - | LOC100506639 | 5 | - |
| exon-intron | ZNF133 | 20 | + | EMILIN2 | 18 | - |
| exon-intron | ZNF135 | 19 | + | SNAI3-AS1 | 16 | - |
| exon-exon | ZNF135 | 19 | + | ZSCAN18 | 19 | + |
| exon-intron | ZNF141 | 4 | + | UBE2Q2P2 | 15 | - |
| exon-exon | ZNF142 | 2 | + | BCS1L | 2 | + |
| exon-exon | ZNF142 | 2 | + | BCS1L | 2 | + |
| exon-exon | ZNF174 | 16 | + | NAA60 | 16 | + |
| exon-exon | ZNF177 | 19 | - | ZNF559 | 19 | - |
| exon-exon | ZNF177 | 19 | - | ZNF559 | 19 | - |
| exon-exon | ZNF177 | 19 | - | ZNF559 | 19 | - |
| exon-intron | ZNF19 | 16 | - | AC010547.4 | 16 | - |
| intron-exon | ZNF205-AS1 | 16 | + | ZNF205 | 16 | + |
| intron-exon | ZNF205-AS1 | 16 | + | ZNF205 | 16 | + |
| intron-exon | ZNF205-AS1 | 16 | + | ZNF205 | 16 | + |
| intron-exon | ZNF213-AS1 | 16 | + | ZNF213 | 16 | + |
| intron-exon | ZNF22-AS1 | 10 | - | RASSF4 | 10 | - |
| exon-exon | ZNF222 | 19 | + | ZNF223 | 19 | + |
| intron-exon | ZNF225 | 19 | - | LOC100379224 | 19 | - |
| exon-exon | ZNF235 | 19 | - | ZNF227 | 19 | - |
| exon-exon | ZNF235 | 19 | - | ZNF227 | 19 | - |
| exon-exon | ZNF235 | 19 | - | ZNF233 | 19 | - |
| intron-exon | ZNF236 | 18 | - | ATPAF1 | 1 | + |
| exon-intron | ZNF251 | 8 | + | LOC107986986 | 8 | + |
| exon-intron | ZNF252P-AS1 | 8 | - | ZNF252P | 8 | - |
| exon-intron | ZNF252P-AS1 | 8 | - | ZNF252P | 8 | - |
| exon-exon | ZNF253 | 19 | + | ZNF93 | 19 | + |
| intron-exon | ZNF263 | 16 | - | LINC00921 | 16 | - |
| intron-exon | ZNF263 | 16 | - | LINC00921 | 16 | - |
| exon-exon | ZNF271P | 18 | + | ZNF33B | 10 | - |
| exon-exon | ZNF275 | X | + | LOC105373378 | X | + |
| intron-exon | ZNF276 | 16 | - | JCAD | 10 | - |
| exon-exon | ZNF280B | 22 | - | KIF19 | 17 | + |
| exon-exon | ZNF285 | 19 | - | ZNF112 | 19 | - |
| exon-exon | ZNF286A | 17 | + | TBC1D26 | 17 | + |
| intron-exon | ZNF286B | 17 | + | FOXO3B | 17 | + |
| exon-exon | ZNF3 | 7 | - | ZSCAN21 | 7 | - |
| exon-intron | ZNF316 | 7 | + | RNR1 | MT | + |
| exon-exon | ZNF333 | 19 | + | ADGRE2 | 19 | + |
| exon-exon | ZNF334 | 20 | + | ZNF107 | 7 | - |
| exon-intron | ZNF337 | 20 | - | NINL | 20 | - |
| exon-intron | ZNF345 | 19 | + | ZNF829 | 19 | + |
| exon-intron | ZNF345 | 19 | - | CEP126 | 11 | - |
| exon-intron | ZNF347 | 19 | - | ZNF415 | 19 | - |
| intron-exon | ZNF367 | 9 | - | GFM2 | 5 | - |
| intron-exon | ZNF367 | 9 | - | GFM2 | 5 | - |
| intron-exon | ZNF367 | 9 | - | GFM2 | 5 | - |
| exon-exon | ZNF383 | 19 | - | ZNF585B | 19 | - |
| intron-exon | ZNF394 | 7 | - | ZNF789 | 7 | - |
| intron-exon | ZNF394 | 7 | - | ZNF789 | 7 | - |
| intron-exon | ZNF416 | 19 | + | ZIK1 | 19 | + |
| exon-intron | ZNF417 | 19 | - | ZNF814 | 19 | - |
| exon-exon | ZNF419 | 19 | + | ZNF773 | 19 | + |
| intron-exon | ZNF420 | 19 | + | ZNF585A | 19 | + |
| exon-exon | ZNF425 | 7 | - | ZNF786 | 7 | - |
| exon-exon | ZNF425 | 7 | - | ZNF786 | 7 | - |
| exon-exon | ZNF425 | 7 | - | ZNF786 | 7 | - |
| exon-intron | ZNF428 | 19 | - | MLLT10 | 10 | - |
| exon-exon | ZNF431 | 19 | + | ZNF429 | 19 | + |
| exon-intron | ZNF431 | 19 | - | LOC112268247 | 19 | - |
| exon-exon | ZNF436-AS1 | 1 | - | ZNF436 | 1 | - |
| exon-intron | ZNF436-AS1 | 1 | - | ZNF436 | 1 | - |
| exon-exon | ZNF436-AS1 | 1 | - | ZNF436 | 1 | - |
| exon-exon | ZNF436-AS1 | 1 | - | ZNF436 | 1 | - |
| exon-exon | ZNF436-AS1 | 1 | - | ZNF436 | 1 | - |
| exon-exon | ZNF436-AS1 | 1 | - | ZNF436 | 1 | - |
| exon-exon | ZNF436-AS1 | 1 | - | ZNF436 | 1 | - |
| exon-exon | ZNF436-AS1 | 1 | - | ZNF436 | 1 | - |
| exon-exon | ZNF436-AS1 | 1 | - | ZNF436 | 1 | - |
| exon-exon | ZNF436-AS1 | 1 | - | ZNF436 | 1 | - |
| exon-intron | ZNF440 | 19 | - | ECSIT | 19 | - |
| intron-exon | ZNF443 | 19 | - | ZNF799 | 19 | - |
| exon-exon | ZNF444P1 | 15 | + | RNF111 | 15 | + |
| intron-exon | ZNF451-AS1 | 6 | - | ZNF451 | 6 | - |
| exon-intron | ZNF460 | 19 | - | MET | 7 | - |
| exon-intron | ZNF460 | 19 | - | MET | 7 | - |
| exon-intron | ZNF492 | 19 | + | AC024563.1 | 19 | + |
| exon-exon | ZNF496 | 1 | - | ZBTB25 | 14 | + |
| exon-intron | ZNF503 | 10 | + | IGLON5 | 19 | - |
| exon-intron | ZNF506 | 19 | - | LOC112267872 | 19 | - |
| exon-intron | ZNF506 | 19 | - | LOC112267872 | 19 | - |
| exon-exon | ZNF506 | 19 | - | LOC112267872 | 19 | - |
| exon-intron | ZNF506 | 19 | - | LOC112267872 | 19 | - |
| exon-intron | ZNF506 | 19 | - | LOC112267872 | 19 | - |
| exon-intron | ZNF506 | 19 | - | LOC112267872 | 19 | - |
| exon-exon | ZNF511 | 10 | + | PRAP1 | 10 | + |
| exon-intron | ZNF512 | 2 | + | STIM1 | 11 | - |
| exon-exon | ZNF514 | 2 | - | MRPS5 | 2 | - |
| exon-exon | ZNF525 | 19 | + | ZNF765-ZNF761 | 19 | + |
| intron-exon | ZNF527 | 19 | + | ZNF793 | 19 | + |
| intron-exon | ZNF528 | 19 | + | RPL15 | 3 | - |
| exon-intron | ZNF530 | 19 | - | AC004076.1 | 19 | - |
| exon-exon | ZNF540 | 19 | + | ZFP30 | 19 | + |
| intron-exon | ZNF541 | 19 | + | SLITRK6 | 13 | + |
| intron-exon | ZNF542P | 19 | + | ZNF582 | 19 | + |
| exon-exon | ZNF547 | 19 | + | ZNF548 | 19 | + |
| exon-exon | ZNF548 | 19 | + | ZNF17 | 19 | + |
| exon-intron | ZNF548 | 19 | + | AC003002.2 | 19 | + |
| exon-intron | ZNF548 | 19 | + | AC003002.3 | 19 | + |
| exon-exon | ZNF548 | 19 | + | ZNF17 | 19 | + |
| exon-intron | ZNF552 | 19 | - | ZNF586 | 19 | - |
| exon-intron | ZNF552 | 19 | - | ZNF586 | 19 | - |
| exon-intron | ZNF557 | 19 | + | RABGEF1 | 7 | - |
| exon-exon | ZNF559 | 19 | + | ZNF177 | 19 | + |
| exon-exon | ZNF559 | 19 | + | ZNF177 | 19 | + |
| intron-exon | ZNF559 | 19 | + | ZNF177 | 19 | + |
| exon-intron | ZNF559 | 19 | + | ZNF177 | 19 | + |
| exon-exon | ZNF559 | 19 | + | ZNF177 | 19 | + |
| exon-exon | ZNF559 | 19 | + | ZNF177 | 19 | + |
| exon-exon | ZNF559-ZNF177 | 19 | + | ZNF559-ZNF177 | 19 | + |
| exon-exon | ZNF559-ZNF177 | 19 | + | ZNF559-ZNF177 | 19 | + |
| exon-exon | ZNF559-ZNF177 | 19 | + | ZNF559-ZNF177 | 19 | + |
| exon-exon | ZNF561-AS1 | 19 | + | ZNF562 | 19 | + |
| exon-intron | ZNF562 | 19 | - | LOC105372269 | 19 | - |
| exon-exon | ZNF564 | 19 | - | ZNF709 | 19 | - |
| exon-intron | ZNF566 | 19 | + | ZNF566 | 19 | - |
| intron-exon | ZNF570 | 19 | - | ZNF569 | 19 | - |
| exon-intron | ZNF571 | 19 | - | ZNF571-AS1 | 19 | - |
| exon-intron | ZNF571 | 19 | - | ZNF571-AS1 | 19 | - |
| exon-exon | ZNF571-AS1 | 19 | + | ZNF540 | 19 | + |
| exon-exon | ZNF573 | 19 | - | MCMDC2 | 8 | + |
| exon-intron | ZNF576 | 19 | + | ZNF428 | 19 | + |
| exon-intron | ZNF577 | 19 | + | ZNF649-AS1 | 19 | + |
| exon-intron | ZNF577 | 19 | + | ZNF649-AS1 | 19 | + |
| exon-intron | ZNF582 | 19 | - | ZNF542P | 19 | - |
| exon-intron | ZNF582 | 19 | - | ZNF542P | 19 | - |
| exon-intron | ZNF586 | 19 | + | ZNF552 | 19 | + |
| intron-exon | ZNF587 | 19 | + | ZNF814 | 19 | + |
| exon-exon | ZNF587 | 19 | + | UBE2CP5 | 19 | + |
| exon-exon | ZNF587 | 19 | + | UBE2CP5 | 19 | + |
| exon-exon | ZNF587B | 19 | + | ZNF587 | 19 | + |
| exon-exon | ZNF587B | 19 | + | ZNF587 | 19 | + |
| exon-exon | ZNF587B | 19 | + | ZNF587 | 19 | + |
| exon-exon | ZNF587B | 19 | + | ZNF587 | 19 | + |
| exon-exon | ZNF587B | 19 | + | ZNF587 | 19 | + |
| exon-intron | ZNF587B | 19 | + | OCA2 | 15 | - |
| exon-intron | ZNF595 | 4 | + | GPHN | 14 | - |
| intron-exon | ZNF600 | 19 | - | MKNK2 | 19 | + |
| exon-exon | ZNF605 | 12 | - | CHFR | 12 | - |
| exon-exon | ZNF606 | 19 | + | LOC100128398 | 19 | + |
| exon-intron | ZNF607 | 19 | - | ZNF781 | 19 | - |
| exon-intron | ZNF607 | 19 | - | ZNF781 | 19 | - |
| exon-intron | ZNF607 | 19 | - | ZNF781 | 19 | - |
| intron-exon | ZNF620 | 3 | - | ZNF619 | 3 | - |
| exon-intron | ZNF623 | 8 | - | NFIC | 19 | + |
| exon-intron | ZNF625 | 19 | - | ZNF625-ZNF20 | 19 | - |
| exon-exon | ZNF625-ZNF20 | 19 | - | ZNF625-ZNF20 | 19 | - |
| exon-exon | ZNF625-ZNF20 | 19 | - | ZNF625-ZNF20 | 19 | - |
| exon-intron | ZNF630 | X | - | ZNF630-AS1 | X | - |
| exon-intron | ZNF638 | 2 | + | CDK19 | 6 | - |
| exon-exon | ZNF646 | 16 | - | PSMD6 | 3 | - |
| exon-intron | ZNF649 | 19 | - | PLOD2 | 3 | - |
| exon-exon | ZNF649 | 19 | - | ZNF577 | 19 | - |
| exon-exon | ZNF655 | 7 | + | TMEM225B | 7 | + |
| exon-exon | ZNF655 | 7 | + | NUDCD3 | 7 | - |
| exon-exon | ZNF660 | 3 | + | ZNF197 | 3 | + |
| exon-exon | ZNF660 | 3 | + | ZNF197 | 3 | + |
| exon-exon | ZNF660-ZNF197 | 3 | + | ZNF660-ZNF197 | 3 | + |
| exon-exon | ZNF664 | 12 | + | ZNF664-RFLNA | 12 | + |
| exon-intron | ZNF664 | 12 | + | ZNF664-RFLNA | 12 | + |
| exon-intron | ZNF664 | 12 | + | ZNF664-RFLNA | 12 | + |
| exon-exon | ZNF664 | 12 | + | TRIM25 | 17 | + |
| intron-exon | ZNF664-RFLNA | 12 | + | GNAO1 | 16 | - |
| exon-exon | ZNF664-RFLNA | 12 | - | ZNF664-RFLNA | 12 | - |
| exon-intron | ZNF665 | 19 | + | ZNF677 | 19 | + |
| exon-intron | ZNF667 | 19 | + | FLCN | 17 | - |
| exon-exon | ZNF667 | 19 | + | ZNF667-AS1 | 19 | + |
| exon-exon | ZNF670 | 1 | - | ZNF695 | 1 | - |
| exon-intron | ZNF670 | 1 | - | ZNF695 | 1 | - |
| intron-exon | ZNF674 | X | + | SLC9A7 | X | + |
| exon-exon | ZNF675 | 19 | - | C2orf49 | 2 | + |
| exon-exon | ZNF676 | 19 | - | ZNF43 | 19 | - |
| exon-intron | ZNF682 | 19 | - | BNIP3P12 | 19 | - |
| exon-intron | ZNF682 | 19 | - | BNIP3P12 | 19 | - |
| exon-exon | ZNF687 | 1 | + | ZNF687 | 1 | - |
| exon-intron | ZNF687 | 1 | - | PIP5K1A | 1 | - |
| intron-exon | ZNF69 | 19 | + | ZNF763 | 19 | + |
| intron-exon | ZNF69 | 19 | + | ZNF763 | 19 | + |
| exon-exon | ZNF695 | 1 | + | ZNF670 | 1 | + |
| exon-exon | ZNF696 | 8 | + | ZC3H3 | 8 | - |
| exon-exon | ZNF696 | 8 | + | ZC3H3 | 8 | - |
| intron-exon | ZNF702P | 19 | - | ZNF320 | 19 | - |
| exon-intron | ZNF706 | 8 | - | LOC724084 | 1 | - |
| exon-intron | ZNF709 | 19 | - | AC008758.6 | 19 | - |
| exon-intron | ZNF710 | 15 | + | ZNF710-AS1 | 15 | + |
| intron-exon | ZNF714 | 19 | + | ZNF431 | 19 | + |
| intron-exon | ZNF717 | 3 | - | LINC00960 | 3 | - |
| exon-exon | ZNF720 | 16 | + | LOC107983990 | 16 | + |
| exon-exon | ZNF720 | 16 | + | LOC107983990 | 16 | + |
| exon-exon | ZNF726 | 19 | + | ZNF254 | 19 | + |
| exon-exon | ZNF731P | 1 | + | LOC112268259 | 1 | + |
| exon-exon | ZNF75A | 16 | - | TIGD7 | 16 | - |
| exon-exon | ZNF75A | 16 | - | TIGD7 | 16 | - |
| exon-exon | ZNF75A | 16 | - | TIGD7 | 16 | - |
| exon-exon | ZNF75A | 16 | - | TIGD7 | 16 | - |
| exon-exon | ZNF75A | 16 | - | TIGD7 | 16 | - |
| exon-exon | ZNF765 | 19 | + | ZNF761 | 19 | + |
| exon-intron | ZNF771 | 16 | + | DCTPP1 | 16 | + |
| exon-exon | ZNF772 | 19 | - | VN1R1 | 19 | - |
| exon-exon | ZNF776 | 19 | - | ZNF551 | 19 | - |
| exon-exon | ZNF781 | 19 | + | ZNF607 | 19 | + |
| exon-exon | ZNF781 | 19 | - | ZFP30 | 19 | - |
| exon-intron | ZNF781 | 19 | - | ZFP30 | 19 | - |
| exon-exon | ZNF781 | 19 | - | ZFP30 | 19 | - |
| exon-intron | ZNF781 | 19 | - | ZFP30 | 19 | - |
| intron-exon | ZNF781 | 19 | - | ZFP30 | 19 | - |
| intron-exon | ZNF782 | 9 | + | LOC100132781 | 9 | + |
| exon-exon | ZNF783 | 7 | + | LOC155060 | 7 | + |
| exon-exon | ZNF786 | 7 | + | ZNF425 | 7 | + |
| exon-exon | ZNF786 | 7 | + | ZNF425 | 7 | + |
| exon-exon | ZNF786 | 7 | - | PRKAG2 | 7 | - |
| exon-exon | ZNF788P | 19 | + | LOC105372275 | 19 | + |
| exon-exon | ZNF789 | 7 | + | ATP5MF-PTCD1 | 7 | - |
| exon-intron | ZNF789 | 7 | + | ZNF394 | 7 | + |
| intron-exon | ZNF790 | 19 | - | ZNF790-AS1 | 19 | - |
| exon-intron | ZNF791 | 19 | + | LOC105372279 | 19 | + |
| exon-intron | ZNF799 | 19 | - | AC008758.4 | 19 | - |
| intron-exon | ZNF8-ERVK3-1 | 19 | + | CEACAM6 | 19 | + |
| exon-exon | ZNF8-ERVK3-1 | 19 | + | LOC105372480 | 19 | + |
| exon-exon | ZNF8-ERVK3-1 | 19 | + | LOC105372480 | 19 | + |
| exon-exon | ZNF8-ERVK3-1 | 19 | + | LOC105372480 | 19 | + |
| intron-exon | ZNF800 | 7 | + | TANK | 2 | - |
| exon-intron | ZNF808 | 19 | + | ZNF701 | 19 | + |
| exon-intron | ZNF814 | 19 | - | ZNF587 | 19 | - |
| exon-exon | ZNF816 | 19 | - | ZNF321P | 19 | - |
| intron-exon | ZNF816-ZNF321P | 19 | + | ZNF816 | 19 | + |
| exon-exon | ZNF816-ZNF321P | 19 | - | ZNF816 | 19 | - |
| exon-exon | ZNF816-ZNF321P | 19 | - | ZNF816 | 19 | - |
| intron-exon | ZNF821 | 16 | + | IST1 | 16 | + |
| exon-exon | ZNF823 | 19 | + | ZNF823 | 19 | - |
| intron-exon | ZNF829 | 19 | - | ZNF345 | 19 | - |
| intron-exon | ZNF829 | 19 | - | ZNF345 | 19 | - |
| exon-intron | ZNF829 | 19 | - | ZNF345 | 19 | - |
| exon-exon | ZNF83 | 19 | - | EXOC3L2 | 19 | - |
| exon-intron | ZNF83 | 19 | - | ZNF701 | 19 | - |
| exon-intron | ZNF85 | 19 | + | TTC28 | 22 | - |
| intron-exon | ZNF878 | 19 | - | ZNF433-AS1 | 19 | - |
| intron-exon | ZNF878 | 19 | - | ZNF433 | 19 | - |
| exon-intron | ZNF880 | 19 | + | ZSCAN31 | 6 | - |
| exon-exon | ZNF91 | 19 | + | ITGB1BP1 | 2 | - |
| exon-intron | ZNFX1 | 20 | - | DDX27 | 20 | - |
| exon-exon | ZNHIT1 | 7 | - | PLOD3 | 7 | - |
| exon-exon | ZNHIT1 | 7 | - | PLOD3 | 7 | - |
| exon-exon | ZNHIT1 | 7 | - | PLOD3 | 7 | - |
| exon-exon | ZNHIT3 | 17 | + | MYO19 | 17 | + |
| intron-exon | ZNRD1ASP | 6 | - | HLA-A | 6 | - |
| exon-exon | ZNRD2 | 11 | + | FAM89B | 11 | + |
| exon-intron | ZNRD2 | 11 | + | FAM89B | 11 | + |
| intron-exon | ZNRF1 | 16 | - | WDR59 | 16 | - |
| exon-exon | ZNRF2 | 7 | + | LINC01176 | 7 | + |
| intron-exon | ZRANB3 | 2 | - | RAB3GAP1 | 2 | - |
| exon-exon | ZRSR2 | X | + | AP1S2 | X | - |
| exon-intron | ZRSR2 | X | - | C20orf194 | 20 | + |
| intron-exon | ZSCAN16-AS1 | 6 | + | ZNF165 | 6 | + |
| exon-intron | ZSCAN16-AS1 | 6 | - | ZNF165 | 6 | - |
| intron-exon | ZSCAN18 | 19 | - | ZNF550 | 19 | - |
| exon-intron | ZSCAN25 | 7 | + | ZNF664-RFLNA | 12 | + |
| exon-intron | ZSCAN26 | 6 | + | AL021997.3 | 6 | + |
| exon-intron | ZSCAN26 | 6 | + | PGBD1 | 6 | + |
| exon-exon | ZSCAN26 | 6 | - | ZNF195 | 11 | + |
| exon-exon | ZSCAN29 | 15 | + | TUBGCP4 | 15 | + |
| exon-exon | ZSCAN30 | 18 | - | GNB1 | 1 | - |
| intron-exon | ZWILCH | 15 | - | RPL4 | 15 | - |
| intron-exon | ZWILCH | 15 | - | RPL4 | 15 | - |
| exon-exon | ZXDC | 3 | + | ZXDC | 3 | - |
| exon-intron | ZYX | 7 | + | EPHA1 | 7 | + |
| exon-exon | ZZEF1 | 17 | - | ZZEF1 | 17 | + |